MD17G1180500.v1.1

DNA repair protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0001026
Physical Location & Seq
Forward (+)
20967710 .. 20990462
22753 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1180500.v1.1.491

Sequence Viewer

Length: 2226 bp
ATGGACCCTTTTGAACCATTAAACCCAAGGGTTTTGGGGTTAAACCTGCCCAAACAATTCCAGTCTTTTCTACTTCGCGGGTTGTTTGCATTTCAACTCAAAAGCTGCAAAATCGACCCTTCACTGCACACAGAGTTCTCTTCTACCTTCAACTCTTTGATGCCAGTAGTATCAGACATGAGAGCTCTCCGAGCAATCTCCACCCACAAACACCTCCTCAAACCCACCCTCTCCATACCTTCCCTCGCCTCCTTCCAATCCCTCCAAAACCCTAACTTTTCCCGCCATATCCACTCCACAAGCCGTCTCCACCATGCCGAAGAGCCGGGCTCCGCCGCCGATTCCCTGCAAACGCACAACAGTTCGAGCTCCAAGGGAGAAACCCGTCGCGGTTGGTCTGTCTTTCGTCCTGTCTCGCACACATTGGCGACTCAAAGGGTCCCGAATACCAGCGGCGATGGACAAGAACTAAGAGGCGAAAATGAAAGCGAAACCCAATTGGGTTTATCGAGTTTGGGAAATGGGTTCGACGAGATTGAGAAAGATAGGGTTCAGAGGAGTGGTAAAAGTGAAACCCAATTGGGTTTATCAAATTTTGGATATGGGTTCGATGAGATTGAGAGAGATGAAGCTCATAGGAGTGCTAAAAGTGAAGCCCGTATGGGTTTATCGAATTTACGAAGTGAGGTTGGCGGGTTTGAGAGAGATGAGGCTGTTAGGAGTGTTAAGAAAGTAAATGCAGGGTCTAAGCTTTTTGGGGGAATAGTAAGGAGTAAGAAGAAGGGGAAGGTTAAAACTAGCTGGGTTTGCTCGAATTGTGGGGAGTCATTTGGGCAGTGGTGGGGTGAATGCCGGTCTTGTAATGAAATGGGCACATTGAAGCAGTTTTCGGAGACAAGCGATGATGGTAAGGTTAGTGGGTTTGAGGTTTCAGAGAAGGTGGTGCGGTCGTGGATGCCGCTGGAGGCAAGCGAGGTTGGGCCAACGCGGTTGACAGATGTGAACCGGGGGATTAATTGGACAGAAAGGCGGATTCCTTTGCCTGGACTCTTTGGATGTGAAGTTGCAAGGGTGCTTGGTGGTGGTGTTGTGCAAGGTTCATTAATTTTGATTGGCGGTGATCCAGGAGTCGGCAAGAGTACACTCGTGTTGCAGGTAATGGCTTCACTAATAGCTGAAGGGCAAGGGCTTGGTAAAGCGGCCTCTGTTGTGTATGTCTCAGGTGAAGAGAGTGTTGAGCAAATTGGAAGCAGAGCTGACCGTATGAAGATTGAAACAGAGGATCTTTTCTTGTACTCAAGTACCGATATTGAGGATATATTAGAAAAAATTCAACCTCTCAACCCTCGGGCTTTAATCATTGATTCGATTCAAACAGTTTATTTAAAAGGAGTTGCTGGAAGTGCTGGAGCGATCCAACAGGTGAAGGAATGCACATCAGCCTTGCTGCGTTTTGCAAAGAAGACTAACGTCCCTGTTCTCTTGATTGGGCACGTAACAAAATCTGGAGATATTGCTGGACCTCGTGTCTTGGAGCATATTGTTGATGTTGTACTATATATGGAAGGGGAGGAGAACTTATCCCATCGTTTACTTCGATCTGTGAAGAATCGCTATGGATCCACTGATGAGCTTGGAGTATTTGAAATGACACAATCAGGACTGCAAGCTCTTTCAAACCCCAGTGAGATGTTTCTATCTGAGAAATACTCAGATTCACCTTGTTTAGCTGGTTTAGCTGTTGCTGTAATAATGGATGGATCTCGAACGTTTCTCATTGAGATTCAGGCATTGTGTGTATCTGAGTCAACAGTTTTACGGCAAGTTAATGGGGTTTCAGCAAGTAGAGCTGACATGATTAAATCTGTACTAACGAAGCAAGCTGGTCTAAAGCTCCAGGAGAATGCCATCTTCTTAAATGTTGTCAGTGGGGTGACGCTGAAAGAAACTGCTGGAGATCTTGCAATAGCAGTAGCAATTTGCAGCAGTTTCTTGGAGTTCCCTATTCCCAATAGTATTGCATTCATTGGTGAAATTGGACTTGCTGGCGAGCTTCGGCCGGTCACTCGAATGGATAAAAGGATACACACAGTGGCGAAACTGGGCTACAAGATGTGTATCGTTCCAAAATCATCCGAGACATATCAAGGAACTCCAGGTTTAGAGGACATTGAAATTATTGGCTGCAAGGATCTGAAGGAGGTCATCAGCAATGTGTTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_25 ChlI

Protein Analysis

742

Amino Acids

80.56

Weight (kDa)

6.58

Isoelectric Point (pI)

44.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_LapB PF18073 268 - 294 3.4e-06 Rubredoxin metal binding domain
AAA_25 PF13481 361 - 504 9.9e-18 AAA domain
AAA PF00004 369 - 506 9.7e-06 ATPase family associated with various cellular activities (AAA)
ChlI PF13541 618 - 711 4.1e-10 Subunit ChlI of Mg-chelatase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 54, 1144
AccII CGCG 3 cut(s) 78, 390, 988
AclI AACGTT 1 cut(s) 1769
AclWI GGATC 7 cut(s) 1115, 1290, 1408, 1614, 1627, 1768, 2199
AcoI YGGCCR 1 cut(s) 2057
AcsI RAATTY 3 cut(s) 592, 673, 1329
AcuI CTGAAG 2 cut(s) 1197, 2216
AdeI CACNNNGTG 1 cut(s) 2092
AfaI GTAC 5 cut(s) 1141, 1295, 1303, 1554, 1869
AfiI CCNNNNNNNGG 2 cut(s) 1043, 1130
AhdI GACNNNNNGTC 1 cut(s) 1526
AjnI CCWGG 4 cut(s) 1042, 1123, 1896, 2155
Alw21I GWGCWC 2 cut(s) 187, 371
Alw26I GTCTC 5 cut(s) 311, 418, 887, 1222, 2132
AlwI GGATC 7 cut(s) 1115, 1290, 1408, 1614, 1627, 1768, 2199
Ama87I CYCGRG 1 cut(s) 1347
AoxI GGCC 3 cut(s) 980, 1200, 2057
ApeKI GCWGC 4 cut(s) 105, 1447, 1983, 2184
ApoI RAATTY 3 cut(s) 592, 673, 1329
AseI ATTAAT 2 cut(s) 1014, 1103
Asp700I GAANNNNTTC 1 cut(s) 1329
AspS9I GGNCC 4 cut(s) 4, 439, 980, 1520
AsuC2I CCSGG 2 cut(s) 327, 1007
AsuHPI GGTGA 7 cut(s) 857, 1130, 1235, 1435, 1710, 1945, 2042
AvaI CYCGRG 1 cut(s) 1347
AvaII GGWCC 3 cut(s) 4, 439, 1520
BaeGI GKGCMC 2 cut(s) 875, 1494
BaeI ACNNNNGTAYC 2 cut(s) 1285, 1318
BamHI GGATCC 1 cut(s) 1619
BanII GRGCYC 3 cut(s) 187, 332, 371
BauI CACGAG 2 cut(s) 1145, 1524
BbsI GAAGAC 1 cut(s) 1469
Bbv12I GWGCWC 2 cut(s) 187, 371
BbvI GCAGC 4 cut(s) 92, 1434, 1995, 2171
BccI CCATC 5 cut(s) 452, 899, 1593, 1751, 1916
BceAI ACGGC 2 cut(s) 288, 1835
BciT130I CCWGG 4 cut(s) 1044, 1125, 1898, 2157
BciVI GTATCC 1 cut(s) 2076
BcnI CCSGG 2 cut(s) 327, 1007
BcoDI GTCTC 5 cut(s) 311, 418, 887, 1222, 2132
BfaI CTAG 1 cut(s) 798
BfuAI ACCTGC 2 cut(s) 54, 1144
BfuI GTATCC 1 cut(s) 2076
BglII AGATCT 1 cut(s) 1957
BisI GCNGC 8 cut(s) 106, 336, 454, 959, 1200, 1448, 1984, 2185
BlsI GCNGC 8 cut(s) 107, 337, 455, 960, 1201, 1449, 1985, 2186
Bme1390I CCNGG 6 cut(s) 327, 1007, 1044, 1125, 1898, 2157
Bme18I GGWCC 3 cut(s) 4, 439, 1520
BmeRI GACNNNNNGTC 1 cut(s) 1526
BmeT110I CYCGRG 1 cut(s) 1347
BmgT120I GGNCC 4 cut(s) 4, 439, 980, 1520
BmiI GGNNCC 5 cut(s) 6, 331, 440, 441, 1621
BmrFI CCNGG 6 cut(s) 327, 1007, 1044, 1125, 1898, 2157
BmrI ACTGGG 2 cut(s) 1677, 2111
BmsI GCATC 2 cut(s) 150, 945
BmuI ACTGGG 2 cut(s) 1677, 2111
BoxI GACNNNNGTC 1 cut(s) 1469
BpiI GAAGAC 1 cut(s) 1469
BplI GAGNNNNNCTC 4 cut(s) 314, 346, 1694, 1726
BpmI CTGGAG 6 cut(s) 983, 1428, 1527, 1880, 1974, 2139
BpuEI CTTGAG 1 cut(s) 1282
BpuMI CCSGG 2 cut(s) 327, 1007
BsaAI YACGTR 1 cut(s) 1495
BsaBI GATNNNNATC 1 cut(s) 2117
BsaJI CCNNGG 4 cut(s) 26, 372, 1006, 1346
Bsc4I CCNNNNNNNGG 2 cut(s) 1043, 1130
Bse118I RCCGGY 2 cut(s) 852, 2059
Bse1I ACTGG 4 cut(s) 61, 164, 1683, 2106
Bse3DI GCAATG 1 cut(s) 2218
Bse8I GATNNNNATC 1 cut(s) 2117
BseBI CCWGG 4 cut(s) 1044, 1125, 1898, 2157
BseDI CCNNGG 4 cut(s) 26, 372, 1006, 1346
BseGI GGATG 4 cut(s) 960, 1061, 1762, 2132
BseJI GATNNNNATC 1 cut(s) 2117
BseLI CCNNNNNNNGG 2 cut(s) 1043, 1130
BseMI GCAATG 1 cut(s) 2218
BseMII CTCAG 4 cut(s) 1233, 1692, 1725, 1794
BseNI ACTGG 4 cut(s) 61, 164, 1683, 2106
BseRI GAGGAG 3 cut(s) 206, 571, 1586
BseSI GKGCMC 2 cut(s) 875, 1494
BseX3I CGGCCG 1 cut(s) 2057
BseXI GCAGC 4 cut(s) 92, 1434, 1995, 2171
BseYI CCCAGC 1 cut(s) 801
BsgI GTGCAG 1 cut(s) 110
Bsh1236I CGCG 3 cut(s) 78, 390, 988
Bsh1285I CGRYCG 2 cut(s) 950, 2060
BshFI GGCC 3 cut(s) 982, 1202, 2059
BsiEI CGRYCG 2 cut(s) 950, 2060
BsiHKAI GWGCWC 2 cut(s) 187, 371
BsiHKCI CYCGRG 1 cut(s) 1347
BsiSI CCGG 4 cut(s) 326, 853, 1006, 2060
BslFI GGGAC 2 cut(s) 425, 1457
BslI CCNNNNNNNGG 2 cut(s) 1043, 1130
BsmAI GTCTC 5 cut(s) 311, 418, 887, 1222, 2132
BsmBI CGTCTC 1 cut(s) 311
BsmFI GGGAC 2 cut(s) 425, 1457
BsmI GAATGC 4 cut(s) 854, 1436, 1909, 2021
BsnI GGCC 3 cut(s) 982, 1202, 2059
BsoBI CYCGRG 1 cut(s) 1347
Bsp1286I GDGCHC 5 cut(s) 187, 332, 371, 875, 1494
Bsp143I GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
BspANI GGCC 3 cut(s) 982, 1202, 2059
BspCNI CTCAG 4 cut(s) 1232, 1693, 1724, 1795
BspFNI CGCG 3 cut(s) 78, 390, 988
BspLI GGNNCC 5 cut(s) 6, 331, 440, 441, 1621
BspMI ACCTGC 2 cut(s) 54, 1144
BspPI GGATC 7 cut(s) 1115, 1290, 1408, 1614, 1627, 1768, 2199
BspQI GCTCTTC 1 cut(s) 315
BsrDI GCAATG 1 cut(s) 2218
BsrFI RCCGGY 2 cut(s) 852, 2059
BsrI ACTGG 4 cut(s) 61, 164, 1683, 2106
BssAI RCCGGY 2 cut(s) 852, 2059
BssECI CCNNGG 4 cut(s) 26, 372, 1006, 1346
BssMI GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
BssSI CACGAG 2 cut(s) 1145, 1524
BssT1I CCWWGG 2 cut(s) 26, 372
Bst2BI CACGAG 2 cut(s) 1145, 1524
Bst2UI CCWGG 4 cut(s) 1044, 1125, 1898, 2157
Bst4CI ACNGT 5 cut(s) 362, 1262, 1378, 1813, 2092
Bst6I CTCTTC 3 cut(s) 145, 315, 1221
BstBAI YACGTR 1 cut(s) 1495
BstC8I GCNNGC 5 cut(s) 970, 1668, 1881, 2047, 2051
BstDEI CTNAG 6 cut(s) 470, 747, 1219, 1701, 1711, 1803
BstF5I GGATG 4 cut(s) 960, 1061, 1762, 2132
BstFNI CGCG 3 cut(s) 78, 390, 988
BstKTI GATC 8 cut(s) 1123, 1285, 1416, 1601, 1622, 1763, 1960, 2194
BstMAI GTCTC 5 cut(s) 311, 418, 887, 1222, 2132
BstMBI GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
BstMCI CGRYCG 2 cut(s) 950, 2060
BstMWI GCNNNNNNNGC 5 cut(s) 191, 807, 1403, 1736, 1847
BstNI CCWGG 4 cut(s) 1044, 1125, 1898, 2157
BstPAI GACNNNNGTC 1 cut(s) 1469
BstSCI CCNGG 6 cut(s) 325, 1005, 1042, 1123, 1896, 2155
BstSLI GKGCMC 2 cut(s) 875, 1494
BstUI CGCG 3 cut(s) 78, 390, 988
BstV1I GCAGC 4 cut(s) 92, 1434, 1995, 2171
BstV2I GAAGAC 1 cut(s) 1469
BstX2I RGATCY 5 cut(s) 1282, 1619, 1760, 1957, 2191
BstYI RGATCY 5 cut(s) 1282, 1619, 1760, 1957, 2191
BstZI CGGCCG 1 cut(s) 2057
BsuI GTATCC 1 cut(s) 2076
BsuRI GGCC 3 cut(s) 982, 1202, 2059
BtgZI GCGATG 2 cut(s) 471, 915
BtsCI GGATG 4 cut(s) 960, 1061, 1762, 2132
BtsI GCAGTG 2 cut(s) 122, 842
BtsIMutI CAGTG 6 cut(s) 122, 842, 1623, 1690, 1933, 2097
BveI ACCTGC 2 cut(s) 54, 1144
Cac8I GCNNGC 5 cut(s) 970, 1668, 1881, 2047, 2051
Cfr10I RCCGGY 2 cut(s) 852, 2059
Cfr13I GGNCC 4 cut(s) 4, 439, 980, 1520
CseI GACGC 1 cut(s) 1945
Csp6I GTAC 5 cut(s) 1140, 1294, 1302, 1553, 1868
CviAII CATG 3 cut(s) 178, 314, 1855
CviQI GTAC 5 cut(s) 1140, 1294, 1302, 1553, 1868
DdeI CTNAG 6 cut(s) 470, 747, 1219, 1701, 1711, 1803
DpnI GATC 8 cut(s) 1122, 1284, 1415, 1600, 1621, 1762, 1959, 2193
DpnII GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
DraI TTTAAA 1 cut(s) 1386
DraIII CACNNNGTG 1 cut(s) 2092
DriI GACNNNNNGTC 1 cut(s) 1526
EaeI YGGCCR 1 cut(s) 2057
EagI CGGCCG 1 cut(s) 2057
Eam1104I CTCTTC 3 cut(s) 145, 315, 1221
Eam1105I GACNNNNNGTC 1 cut(s) 1526
EarI CTCTTC 3 cut(s) 145, 315, 1221
EciI GGCGGA 2 cut(s) 322, 1045
Ecl136II GAGCTC 2 cut(s) 185, 369
EclXI CGGCCG 1 cut(s) 2057
Eco130I CCWWGG 2 cut(s) 26, 372
Eco24I GRGCYC 3 cut(s) 187, 332, 371
Eco47I GGWCC 3 cut(s) 4, 439, 1520
Eco52I CGGCCG 1 cut(s) 2057
Eco53kI GAGCTC 2 cut(s) 185, 369
Eco57I CTGAAG 2 cut(s) 1197, 2216
Eco88I CYCGRG 1 cut(s) 1347
EcoICRI GAGCTC 2 cut(s) 185, 369
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 4 cut(s) 1042, 1123, 1896, 2155
EcoT14I CCWWGG 2 cut(s) 26, 372
EcoT38I GRGCYC 3 cut(s) 187, 332, 371
ErhI CCWWGG 2 cut(s) 26, 372
Esp3I CGTCTC 1 cut(s) 311
FaeI CATG 3 cut(s) 181, 317, 1858
FaqI GGGAC 2 cut(s) 425, 1457
FatI CATG 3 cut(s) 177, 313, 1854
FauI CCCGC 3 cut(s) 71, 290, 686
Fnu4HI GCNGC 8 cut(s) 106, 336, 454, 959, 1200, 1448, 1984, 2185
FokI GGATG 4 cut(s) 967, 1068, 1769, 2119
FriOI GRGCYC 3 cut(s) 187, 332, 371
Fsp4HI GCNGC 8 cut(s) 106, 336, 454, 959, 1200, 1448, 1984, 2185
FspBI CTAG 1 cut(s) 798
GluI GCNGC 8 cut(s) 106, 336, 454, 959, 1200, 1448, 1984, 2185
GsaI CCCAGC 1 cut(s) 805
GsuI CTGGAG 6 cut(s) 983, 1428, 1527, 1880, 1974, 2139
HaeIII GGCC 3 cut(s) 982, 1202, 2059
HapII CCGG 4 cut(s) 326, 853, 1006, 2060
HgaI GACGC 1 cut(s) 1945
Hin1II CATG 3 cut(s) 181, 317, 1858
HincII GTYRAC 2 cut(s) 993, 1809
HindII GTYRAC 2 cut(s) 993, 1809
HindIII AAGCTT 1 cut(s) 749
HpaII CCGG 4 cut(s) 326, 853, 1006, 2060
HphI GGTGA 7 cut(s) 857, 1130, 1235, 1435, 1710, 1945, 2042
Hpy166II GTNNAC 5 cut(s) 993, 1003, 1142, 1592, 1809
Hpy188III TCNNGA 5 cut(s) 442, 1483, 1506, 1659, 1764
Hpy8I GTNNAC 5 cut(s) 993, 1003, 1142, 1592, 1809
Hpy99I CGWCG 2 cut(s) 390, 533
HpyCH4III ACNGT 5 cut(s) 362, 1262, 1378, 1813, 2092
HpyCH4IV ACGT 3 cut(s) 1470, 1494, 1769
HpyF10VI GCNNNNNNNGC 5 cut(s) 191, 807, 1403, 1736, 1847
HpyF3I CTNAG 6 cut(s) 470, 747, 1219, 1701, 1711, 1803
HpySE526I ACGT 3 cut(s) 1470, 1494, 1769
Hsp92II CATG 3 cut(s) 181, 317, 1858
KflI GGGWCCC 1 cut(s) 439
Kzo9I GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
LguI GCTCTTC 1 cut(s) 315
LmnI GCTCC 5 cut(s) 335, 374, 1409, 1534, 1899
Lsp1109I GCAGC 4 cut(s) 92, 1434, 1995, 2171
LweI GCATC 2 cut(s) 150, 945
MaeI CTAG 1 cut(s) 798
MaeII ACGT 3 cut(s) 1470, 1494, 1769
MaeIII GTNAC 3 cut(s) 1495, 1933, 2062
MalI GATC 8 cut(s) 1122, 1284, 1415, 1600, 1621, 1762, 1959, 2193
MboI GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
MboII GAAGA 8 cut(s) 132, 332, 790, 1238, 1279, 1474, 1618, 1903
MfeI CAATTG 2 cut(s) 497, 578
MflI RGATCY 5 cut(s) 1282, 1619, 1760, 1957, 2191
MhlI GDGCHC 5 cut(s) 187, 332, 371, 875, 1494
MlyI GAGTC 5 cut(s) 424, 833, 1041, 1137, 1814
MmeI TCCRAC 1 cut(s) 1441
MroXI GAANNNNTTC 1 cut(s) 1329
MslI CAYNNNNRTG 2 cut(s) 639, 2069
MspA1I CMGCKG 2 cut(s) 453, 961
MspI CCGG 4 cut(s) 326, 853, 1006, 2060
MspR9I CCNGG 6 cut(s) 327, 1007, 1044, 1125, 1898, 2157
MunI CAATTG 2 cut(s) 497, 578
Mva1269I GAATGC 4 cut(s) 854, 1436, 1909, 2021
MvaI CCWGG 4 cut(s) 1044, 1125, 1898, 2157
MvnI CGCG 3 cut(s) 78, 390, 988
MwoI GCNNNNNNNGC 5 cut(s) 191, 807, 1403, 1736, 1847
NciI CCSGG 2 cut(s) 327, 1007
NdeII GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
NlaIII CATG 3 cut(s) 181, 317, 1858
NlaIV GGNNCC 5 cut(s) 6, 331, 440, 441, 1621
NmuCI GTSAC 2 cut(s) 1933, 2062
PciSI GCTCTTC 1 cut(s) 315
PcsI WCGNNNNNNNCGW 1 cut(s) 1594
PctI GAATGC 4 cut(s) 854, 1436, 1909, 2021
PdmI GAANNNNTTC 1 cut(s) 1329
PfeI GAWTC 7 cut(s) 341, 1033, 1364, 1369, 1609, 1715, 1783
PfoI TCCNGGA 2 cut(s) 1123, 1896
PkrI GCNGC 8 cut(s) 107, 337, 455, 960, 1201, 1449, 1985, 2186
PleI GAGTC 5 cut(s) 424, 832, 1041, 1136, 1813
PpsI GAGTC 5 cut(s) 424, 832, 1041, 1136, 1813
Ppu21I YACGTR 1 cut(s) 1495
PpuMI RGGWCCY 1 cut(s) 439
PshAI GACNNNNGTC 1 cut(s) 1469
PshBI ATTAAT 2 cut(s) 1014, 1103
Psp124BI GAGCTC 2 cut(s) 187, 371
Psp1406I AACGTT 1 cut(s) 1769
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 4 cut(s) 1042, 1123, 1896, 2155
PspFI CCCAGC 1 cut(s) 801
PspGI CCWGG 4 cut(s) 1042, 1123, 1896, 2155
PspN4I GGNNCC 5 cut(s) 6, 331, 440, 441, 1621
PspPI GGNCC 4 cut(s) 4, 439, 980, 1520
PspPPI RGGWCCY 1 cut(s) 439
PsuI RGATCY 5 cut(s) 1282, 1619, 1760, 1957, 2191
RsaI GTAC 5 cut(s) 1141, 1295, 1303, 1554, 1869
RsaNI GTAC 5 cut(s) 1140, 1294, 1302, 1553, 1868
RseI CAYNNNNRTG 2 cut(s) 639, 2069
SacI GAGCTC 2 cut(s) 187, 371
SapI GCTCTTC 1 cut(s) 315
SatI GCNGC 8 cut(s) 106, 336, 454, 959, 1200, 1448, 1984, 2185
Sau3AI GATC 8 cut(s) 1120, 1282, 1413, 1598, 1619, 1760, 1957, 2191
Sau96I GGNCC 4 cut(s) 4, 439, 980, 1520
SchI GAGTC 5 cut(s) 424, 833, 1041, 1137, 1814
ScrFI CCNGG 6 cut(s) 327, 1007, 1044, 1125, 1898, 2157
SduI GDGCHC 5 cut(s) 187, 332, 371, 875, 1494
SfaNI GCATC 2 cut(s) 150, 945
SinI GGWCC 3 cut(s) 4, 439, 1520
SmiMI CAYNNNNRTG 2 cut(s) 639, 2069
SmlI CTYRAG 1 cut(s) 1297
SmoI CTYRAG 1 cut(s) 1297
SspMI CTAG 1 cut(s) 798
SstI GAGCTC 2 cut(s) 187, 371
StyD4I CCNGG 6 cut(s) 325, 1005, 1042, 1123, 1896, 2155
StyI CCWWGG 2 cut(s) 26, 372
TaaI ACNGT 5 cut(s) 362, 1262, 1378, 1813, 2092
TaiI ACGT 3 cut(s) 1473, 1497, 1772
TatI WGTACW 4 cut(s) 1139, 1293, 1552, 1867
TauI GCSGC 4 cut(s) 338, 456, 961, 1202
TfiI GAWTC 7 cut(s) 341, 1033, 1364, 1369, 1609, 1715, 1783
TscAI CASTG 6 cut(s) 129, 842, 1630, 1690, 1933, 2097
TseFI GTSAC 2 cut(s) 1933, 2062
TseI GCWGC 4 cut(s) 105, 1447, 1983, 2184
Tsp45I GTSAC 2 cut(s) 1933, 2062
TspDTI ATGAA 6 cut(s) 498, 642, 879, 1089, 1280, 2014
TspRI CASTG 6 cut(s) 129, 842, 1630, 1690, 1933, 2097
VpaK11BI GGWCC 3 cut(s) 4, 439, 1520
VspI ATTAAT 2 cut(s) 1014, 1103
XapI RAATTY 3 cut(s) 592, 673, 1329
XmnI GAANNNNTTC 1 cut(s) 1329
XspI CTAG 1 cut(s) 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.