Rroxscaffold_2G00104210

DNA repair protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0001026
Physical Location & Seq
Forward (+)
27284196 .. 27291724
7529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00104210.1

Sequence Viewer

Length: 1914 bp
ATGCAAGTATCAGACATGAGAGCTCTCAGAGCTATTTACACCCAGCATCGCCTTCTCAAACCCACCACCACCACCCACAAATCCCTCCCAAACCCATCTCTCATTTCCTTCCAATCCCTCCAAAACCCCACCTTTTCCCGCCATTTCCACTCCACTGGTCATCTCCGCCGCCCCGGAGAACCCAACTCCACCACCGGCGACGAAGAGCCCCTTCCCGTGTGGTCCGTCTTCGCTCGCTCCCCGGCGACGCCAAAAGCCTCAATAACAAGTGATGGGGGAGAATCAGGCAGTGAAAACGAAATGGGTCCGTCGAGTTTGGTCAATGGGGTGAGTGAGATTGAGAAGGGTAAGGCTGATAGGAGCGTTGGGAAGGTGAAATCAGGAACTGGGTCGGTTAGTGGTACGTCGAAAAGTGGCAAAGGGAAAGTGAAGACTAGTTGGGTTTGCTCGGATTGTGGGGAGACACATGGGCAGTGGATGGGCCGGTGCCGGAGTTGCGGCCAGTACAACACATTGAAGCAGTTTTCGGAGAGAAATGATGACGGTAAGGCAAGTGGGATTGGGGTTTCGGAGAAGGTGAGGTCTTGGTTGCCGAGAGGGGAGGATCAGCCGGTGCCGTTGAGTGATGTGAACAGGGGGATTAGTTGGAAAGATCGGCGGATTCCATTGCATGGAACCTTTGGAAAAGAAGTTGGGACGGTGCTTGGTGGTGGTATTGTACCAGGTTCATTGGTTTTAATTGGCGGTGATCCTGGTGTTGGCAAGAGTACACTTGTATTGCAGATTGCTGCACTTATAGCTGAAGGAGATGAGCCTGGTAAAGCATCCCGTGTTTTATATGTCTCCGGTGAAGAGAGTATTGAGCAAATTGGGAGCAGAGCTGACCGTATGGGAATTGAAACAGAGGATCTTTTCTTGTACTCAAGTACTGATATTGAGGATATAATCGAGAAAAGTCAGTCTATAGCTCCTCGGGCTCTAATTGTTGATTCCATTCAAACAGTTTATTTAAAAGGAGTGGCTGGAAGTCCTGGAGGCATTGTTCAGGTGAAGGAATGCACGTCAGGCTTGCTGCATTTTGCGAAGAGGACGAACATCCCTGTTTTTTTGATTGGGCATGTAAACAAATCTGGAGAGATTGCTGGACCTCGTGTTTTGGAGCATATTGTTGATTCTGTGCTATATATGGAAGTTGGGGAGAAGCACTCATCTTATCGTTTACTTCGATCTGTGAAGAATCGTTTTGGATCCACTGATGAGCTTGGAGTATTTGAAATGTCACAATCAGGATTACAAGCTGTCTCAAATCCTGGTGGGATGTTTCTAGGAGAACAGTTCTCAGATTCAGAGTATTTGGCTGGTATAGCAGTTGCTGTAACAATGGATGGATCCCGAAGTTTCCTCATTGAGATTCAGGCATTATGTGTATCAGGTCAACCAGTATTACAGCAAGTTAATGGAATTCAAGCTAGTAGAGCTTCCATGATTATTTCAGTACTTGCAAAGCAAGCTGGTCTAAAGCTCCAAGAGAATGCCATCTACTTAAATGTTGTTAGTGGGGTGACGCTGAAAGAAACTGCTGGCGATCTTGCAATAGCCGCAGCAATTTGCAGCAGGCATGTTTCTGCAATGGATAAAAGGATAAATACAGTGGCAAAACTGGGTTACAAGACGTGCATTGTGCCAAAGTCAGCCGAAAAATCTCTAAGAGGAACCCCAGGTTTCGAGGATATGAAAATCATAGGCTGCAAGAATCTGAAAGAGGGAGCCGCCTGCGAGCAAGAAGACCAAAAATACTATTCGAAGCCAACGACGACAGGGAGCCCTTCCGCTATCAGCCCCACTGTTGCCAAAGAGAAGGTAAAATCCACCATCTCCGGCCAAGATTCCAGCACCACCTTCGGAAAACCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA_25 ChlI

Protein Analysis

637

Amino Acids

67.86

Weight (kDa)

8.61

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_LapB PF18073 147 - 173 3.3e-07 Rubredoxin metal binding domain
ATPase PF06745 233 - 319 6.1e-07 KaiC
AAA_25 PF13481 237 - 378 1.2e-17 AAA domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 486, 613
AccB7I CCANNNNNTGG 1 cut(s) 671
AciI CCGC 9 cut(s) 139, 166, 169, 498, 658, 744, 1599, 1770, 1830
AclWI GGATC 7 cut(s) 612, 743, 915, 1242, 1255, 1383, 1396
AcoI YGGCCR 2 cut(s) 499, 1879
AcsI RAATTY 1 cut(s) 1461
AcuI CTGAAG 1 cut(s) 822
AcyI GRCGYC 1 cut(s) 248
AfaI GTAC 7 cut(s) 403, 506, 720, 769, 920, 928, 1497
AfiI CCNNNNNNNGG 2 cut(s) 671, 758
AgsI TTSAA 5 cut(s) 517, 899, 998, 1274, 1466
AhlI ACTAGT 1 cut(s) 434
AjiI CACGTC 2 cut(s) 1062, 1674
AjnI CCWGG 6 cut(s) 721, 751, 814, 1030, 1309, 1717
AloI GAACNNNNNNTCC 2 cut(s) 1026, 1058
Alw21I GWGCWC 1 cut(s) 25
Alw26I GTCTC 3 cut(s) 455, 847, 1306
AlwI GGATC 7 cut(s) 612, 743, 915, 1242, 1255, 1383, 1396
AlwNI CAGNNNCTG 2 cut(s) 386, 1373
Ama87I CYCGRG 1 cut(s) 972
AoxI GGCC 3 cut(s) 481, 499, 1879
ApeKI GCWGC 5 cut(s) 788, 1072, 1601, 1611, 1746
ApoI RAATTY 1 cut(s) 1461
AspS9I GGNCC 4 cut(s) 222, 305, 481, 1145
AsuC2I CCSGG 2 cut(s) 174, 242
AsuHPI GGTGA 7 cut(s) 340, 385, 589, 758, 860, 1060, 1573
AsuII TTCGAA 1 cut(s) 1802
AvaI CYCGRG 1 cut(s) 972
AvaII GGWCC 3 cut(s) 222, 305, 1145
BamHI GGATCC 2 cut(s) 1247, 1388
BanI GGYRCC 2 cut(s) 486, 613
BanII GRGCYC 4 cut(s) 25, 210, 979, 1826
BauI CACGAG 1 cut(s) 1149
BbsI GAAGAC 3 cut(s) 220, 437, 1791
Bbv12I GWGCWC 1 cut(s) 25
BbvI GCAGC 5 cut(s) 775, 1059, 1613, 1623, 1733
BccI CCATC 6 cut(s) 103, 266, 472, 1379, 1544, 1880
BceAI ACGGC 1 cut(s) 601
BcgI CGANNNNNNTGC 1 cut(s) 1882
BciT130I CCWGG 6 cut(s) 723, 753, 816, 1032, 1311, 1719
BcnI CCSGG 2 cut(s) 174, 242
BcoDI GTCTC 3 cut(s) 455, 847, 1306
BcuI ACTAGT 1 cut(s) 434
BfaI CTAG 4 cut(s) 435, 1325, 1470, 1912
BfmI CTRYAG 1 cut(s) 963
BisI GCNGC 9 cut(s) 169, 499, 789, 1073, 1599, 1602, 1612, 1747, 1770
BlsI GCNGC 9 cut(s) 170, 500, 790, 1074, 1600, 1603, 1613, 1748, 1771
BmcAI AGTACT 2 cut(s) 928, 1497
Bme1390I CCNGG 8 cut(s) 174, 242, 723, 753, 816, 1032, 1311, 1719
Bme18I GGWCC 3 cut(s) 222, 305, 1145
BmeT110I CYCGRG 1 cut(s) 972
BmgBI CACGTC 2 cut(s) 1062, 1674
BmgT120I GGNCC 4 cut(s) 222, 305, 481, 1145
BmiI GGNNCC 9 cut(s) 306, 488, 615, 676, 1249, 1390, 1714, 1768, 1823
BmrFI CCNGG 8 cut(s) 174, 242, 723, 753, 816, 1032, 1311, 1719
BmrI ACTGGG 2 cut(s) 396, 1670
BmsI GCATC 2 cut(s) 55, 833
BmuI ACTGGG 2 cut(s) 396, 1670
BpiI GAAGAC 3 cut(s) 220, 437, 1791
BplI GAGNNNNNCTC 2 cut(s) 1190, 1222
BpmI CTGGAG 2 cut(s) 1053, 1152
Bpu14I TTCGAA 1 cut(s) 1802
BpuEI CTTGAG 1 cut(s) 907
BpuMI CCSGG 2 cut(s) 174, 242
BsaHI GRCGYC 1 cut(s) 248
BsaJI CCNNGG 4 cut(s) 172, 240, 971, 1717
BsaWI WCCGGW 1 cut(s) 845
BsaXI ACNNNNNCTCC 2 cut(s) 1026, 1056
Bsc4I CCNNNNNNNGG 2 cut(s) 671, 758
Bse118I RCCGGY 3 cut(s) 194, 483, 610
Bse1I ACTGG 5 cut(s) 160, 391, 502, 1439, 1665
Bse3DI GCAATG 2 cut(s) 665, 1635
BseBI CCWGG 6 cut(s) 723, 753, 816, 1032, 1311, 1719
BseDI CCNNGG 4 cut(s) 172, 240, 971, 1717
BseGI GGATG 5 cut(s) 483, 824, 1095, 1323, 1390
BseLI CCNNNNNNNGG 2 cut(s) 671, 758
BseMI GCAATG 2 cut(s) 665, 1635
BseMII CTCAG 2 cut(s) 40, 1353
BseNI ACTGG 5 cut(s) 160, 391, 502, 1439, 1665
BseRI GAGGAG 1 cut(s) 960
BseXI GCAGC 5 cut(s) 775, 1059, 1613, 1623, 1733
BseYI CCCAGC 1 cut(s) 42
BsgI GTGCAG 1 cut(s) 774
BshFI GGCC 3 cut(s) 483, 501, 1881
BshNI GGYRCC 2 cut(s) 486, 613
BsiHKAI GWGCWC 1 cut(s) 25
BsiHKCI CYCGRG 1 cut(s) 972
BsiSI CCGG 8 cut(s) 174, 195, 242, 484, 490, 611, 846, 1878
BslFI GGGAC 1 cut(s) 709
BslI CCNNNNNNNGG 2 cut(s) 671, 758
BsmAI GTCTC 3 cut(s) 455, 847, 1306
BsmFI GGGAC 1 cut(s) 709
BsmI GAATGC 2 cut(s) 1061, 1537
BsnI GGCC 3 cut(s) 483, 501, 1881
BsoBI CYCGRG 1 cut(s) 972
Bsp119I TTCGAA 1 cut(s) 1802
Bsp1286I GDGCHC 4 cut(s) 25, 210, 979, 1826
Bsp143I GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
BspACI CCGC 9 cut(s) 139, 166, 169, 498, 658, 744, 1599, 1770, 1830
BspANI GGCC 3 cut(s) 483, 501, 1881
BspCNI CTCAG 2 cut(s) 39, 1352
BspLI GGNNCC 9 cut(s) 306, 488, 615, 676, 1249, 1390, 1714, 1768, 1823
BspPI GGATC 7 cut(s) 612, 743, 915, 1242, 1255, 1383, 1396
BspQI GCTCTTC 1 cut(s) 198
BspT104I TTCGAA 1 cut(s) 1802
BspT107I GGYRCC 2 cut(s) 486, 613
BsrDI GCAATG 2 cut(s) 665, 1635
BsrFI RCCGGY 3 cut(s) 194, 483, 610
BsrI ACTGG 5 cut(s) 160, 391, 502, 1439, 1665
BssAI RCCGGY 3 cut(s) 194, 483, 610
BssECI CCNNGG 4 cut(s) 172, 240, 971, 1717
BssMI GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
BssNI GRCGYC 1 cut(s) 248
BssSI CACGAG 1 cut(s) 1149
Bst2BI CACGAG 1 cut(s) 1149
Bst2UI CCWGG 6 cut(s) 723, 753, 816, 1032, 1311, 1719
Bst4CI ACNGT 7 cut(s) 545, 700, 887, 1003, 1335, 1651, 1846
Bst6I CTCTTC 3 cut(s) 198, 846, 1079
BstACI GRCGYC 1 cut(s) 248
BstBI TTCGAA 1 cut(s) 1802
BstC8I GCNNGC 7 cut(s) 235, 1070, 1509, 1582, 1616, 1774, 1778
BstDEI CTNAG 3 cut(s) 26, 1339, 1706
BstF5I GGATG 5 cut(s) 483, 824, 1095, 1323, 1390
BstKTI GATC 8 cut(s) 607, 655, 751, 910, 1229, 1250, 1391, 1588
BstMAI GTCTC 3 cut(s) 455, 847, 1306
BstMBI GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
BstMWI GCNNNNNNNGC 9 cut(s) 29, 495, 797, 974, 1065, 1364, 1475, 1508, 1598
BstNI CCWGG 6 cut(s) 723, 753, 816, 1032, 1311, 1719
BstNSI RCATGY 2 cut(s) 1121, 1622
BstSCI CCNGG 8 cut(s) 172, 240, 721, 751, 814, 1030, 1309, 1717
BstSFI CTRYAG 1 cut(s) 963
BstV1I GCAGC 5 cut(s) 775, 1059, 1613, 1623, 1733
BstV2I GAAGAC 3 cut(s) 220, 437, 1791
BstX2I RGATCY 3 cut(s) 907, 1247, 1388
BstXI CCANNNNNNTGG 1 cut(s) 155
BstYI RGATCY 3 cut(s) 907, 1247, 1388
BsuRI GGCC 3 cut(s) 483, 501, 1881
BtgZI GCGATG 1 cut(s) 32
BtrI CACGTC 2 cut(s) 1062, 1674
BtsCI GGATG 5 cut(s) 483, 824, 1095, 1323, 1390
BtsI GCAGTG 2 cut(s) 295, 479
BtsIMutI CAGTG 6 cut(s) 153, 295, 479, 1251, 1656, 1842
Cac8I GCNNGC 7 cut(s) 235, 1070, 1509, 1582, 1616, 1774, 1778
CaiI CAGNNNCTG 2 cut(s) 386, 1373
Cfr10I RCCGGY 3 cut(s) 194, 483, 610
Cfr13I GGNCC 4 cut(s) 222, 305, 481, 1145
CseI GACGC 2 cut(s) 256, 1573
CsiI ACCWGGT 1 cut(s) 721
Csp6I GTAC 7 cut(s) 402, 505, 719, 768, 919, 927, 1496
CviAII CATG 6 cut(s) 16, 467, 671, 1118, 1483, 1619
CviQI GTAC 7 cut(s) 402, 505, 719, 768, 919, 927, 1496
DdeI CTNAG 3 cut(s) 26, 1339, 1706
DpnI GATC 8 cut(s) 606, 654, 750, 909, 1228, 1249, 1390, 1587
DpnII GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
DraI TTTAAA 1 cut(s) 1011
EaeI YGGCCR 2 cut(s) 499, 1879
Eam1104I CTCTTC 3 cut(s) 198, 846, 1079
EarI CTCTTC 3 cut(s) 198, 846, 1079
EciI GGCGGA 2 cut(s) 155, 673
Ecl136II GAGCTC 1 cut(s) 23
Eco24I GRGCYC 4 cut(s) 25, 210, 979, 1826
Eco47I GGWCC 3 cut(s) 222, 305, 1145
Eco53kI GAGCTC 1 cut(s) 23
Eco57I CTGAAG 1 cut(s) 822
Eco88I CYCGRG 1 cut(s) 972
EcoICRI GAGCTC 1 cut(s) 23
EcoRI GAATTC 1 cut(s) 1461
EcoRII CCWGG 6 cut(s) 721, 751, 814, 1030, 1309, 1717
EcoT38I GRGCYC 4 cut(s) 25, 210, 979, 1826
FaeI CATG 6 cut(s) 19, 470, 674, 1121, 1486, 1622
FalI AAGNNNNNCTT 2 cut(s) 195, 227
FaqI GGGAC 1 cut(s) 709
FatI CATG 6 cut(s) 15, 466, 670, 1117, 1482, 1618
FauI CCCGC 1 cut(s) 146
Fnu4HI GCNGC 9 cut(s) 169, 499, 789, 1073, 1599, 1602, 1612, 1747, 1770
FokI GGATG 5 cut(s) 490, 811, 1082, 1330, 1397
FriOI GRGCYC 4 cut(s) 25, 210, 979, 1826
Fsp4HI GCNGC 9 cut(s) 169, 499, 789, 1073, 1599, 1602, 1612, 1747, 1770
FspBI CTAG 4 cut(s) 435, 1325, 1470, 1912
GluI GCNGC 9 cut(s) 169, 499, 789, 1073, 1599, 1602, 1612, 1747, 1770
GsaI CCCAGC 1 cut(s) 46
GsuI CTGGAG 2 cut(s) 1053, 1152
HaeIII GGCC 3 cut(s) 483, 501, 1881
HapII CCGG 8 cut(s) 174, 195, 242, 484, 490, 611, 846, 1878
HgaI GACGC 2 cut(s) 256, 1573
Hin1I GRCGYC 1 cut(s) 248
Hin1II CATG 6 cut(s) 19, 470, 674, 1121, 1486, 1622
HincII GTYRAC 1 cut(s) 1436
HindII GTYRAC 1 cut(s) 1436
HinfI GANTC 9 cut(s) 281, 661, 989, 1172, 1237, 1343, 1411, 1753, 1886
HpaII CCGG 8 cut(s) 174, 195, 242, 484, 490, 611, 846, 1878
HphI GGTGA 7 cut(s) 340, 385, 589, 758, 860, 1060, 1573
Hpy166II GTNNAC 5 cut(s) 631, 770, 1123, 1220, 1436
Hpy188I TCNGA 9 cut(s) 13, 29, 451, 529, 571, 1342, 1348, 1758, 1904
Hpy188III TCNNGA 5 cut(s) 381, 949, 1131, 1287, 1392
Hpy8I GTNNAC 5 cut(s) 631, 770, 1123, 1220, 1436
Hpy99I CGWCG 5 cut(s) 203, 250, 313, 409, 1816
HpyCH4III ACNGT 7 cut(s) 545, 700, 887, 1003, 1335, 1651, 1846
HpyCH4IV ACGT 3 cut(s) 404, 1061, 1673
HpyF10VI GCNNNNNNNGC 9 cut(s) 29, 495, 797, 974, 1065, 1364, 1475, 1508, 1598
HpyF3I CTNAG 3 cut(s) 26, 1339, 1706
HpySE526I ACGT 3 cut(s) 404, 1061, 1673
Hsp92I GRCGYC 1 cut(s) 248
Hsp92II CATG 6 cut(s) 19, 470, 674, 1121, 1486, 1622
Kzo9I GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
LguI GCTCTTC 1 cut(s) 198
LmnI GCTCC 8 cut(s) 242, 360, 873, 973, 1159, 1527, 1766, 1821
Lsp1109I GCAGC 5 cut(s) 775, 1059, 1613, 1623, 1733
LweI GCATC 2 cut(s) 55, 833
MabI ACCWGGT 1 cut(s) 721
MaeI CTAG 4 cut(s) 435, 1325, 1470, 1912
MaeII ACGT 3 cut(s) 404, 1061, 1673
MaeIII GTNAC 4 cut(s) 1278, 1375, 1561, 1664
MalI GATC 8 cut(s) 606, 654, 750, 909, 1228, 1249, 1390, 1587
MboI GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
MboII GAAGA 7 cut(s) 215, 220, 442, 863, 1096, 1246, 1796
MflI RGATCY 3 cut(s) 907, 1247, 1388
MhlI GDGCHC 4 cut(s) 25, 210, 979, 1826
MluCI AATT 6 cut(s) 738, 867, 894, 981, 1461, 1605
MmeI TCCRAC 1 cut(s) 626
MseI TTAA 4 cut(s) 737, 1010, 1455, 1544
MspI CCGG 8 cut(s) 174, 195, 242, 484, 490, 611, 846, 1878
MspR9I CCNGG 8 cut(s) 174, 242, 723, 753, 816, 1032, 1311, 1719
Mva1269I GAATGC 2 cut(s) 1061, 1537
MvaI CCWGG 6 cut(s) 723, 753, 816, 1032, 1311, 1719
MwoI GCNNNNNNNGC 9 cut(s) 29, 495, 797, 974, 1065, 1364, 1475, 1508, 1598
NciI CCSGG 2 cut(s) 174, 242
NdeII GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
NlaIII CATG 6 cut(s) 19, 470, 674, 1121, 1486, 1622
NlaIV GGNNCC 9 cut(s) 306, 488, 615, 676, 1249, 1390, 1714, 1768, 1823
NmeAIII GCCGAG 1 cut(s) 618
NmuCI GTSAC 2 cut(s) 1278, 1561
NspI RCATGY 2 cut(s) 1121, 1622
NspV TTCGAA 1 cut(s) 1802
PciSI GCTCTTC 1 cut(s) 198
PcsI WCGNNNNNNNCGW 2 cut(s) 1222, 1808
PctI GAATGC 2 cut(s) 1061, 1537
PfeI GAWTC 9 cut(s) 281, 661, 989, 1172, 1237, 1343, 1411, 1753, 1886
PflMI CCANNNNNTGG 1 cut(s) 671
PfoI TCCNGGA 1 cut(s) 1030
PkrI GCNGC 9 cut(s) 170, 500, 790, 1074, 1600, 1603, 1613, 1748, 1771
Psp124BI GAGCTC 1 cut(s) 25
Psp6I CCWGG 6 cut(s) 721, 751, 814, 1030, 1309, 1717
PspFI CCCAGC 1 cut(s) 42
PspGI CCWGG 6 cut(s) 721, 751, 814, 1030, 1309, 1717
PspN4I GGNNCC 9 cut(s) 306, 488, 615, 676, 1249, 1390, 1714, 1768, 1823
PspPI GGNCC 4 cut(s) 222, 305, 481, 1145
PstNI CAGNNNCTG 2 cut(s) 386, 1373
PsuI RGATCY 3 cut(s) 907, 1247, 1388
RsaI GTAC 7 cut(s) 403, 506, 720, 769, 920, 928, 1497
RsaNI GTAC 7 cut(s) 402, 505, 719, 768, 919, 927, 1496
SacI GAGCTC 1 cut(s) 25
SapI GCTCTTC 1 cut(s) 198
SaqAI TTAA 4 cut(s) 737, 1010, 1455, 1544
SatI GCNGC 9 cut(s) 169, 499, 789, 1073, 1599, 1602, 1612, 1747, 1770
Sau3AI GATC 8 cut(s) 604, 652, 748, 907, 1226, 1247, 1388, 1585
Sau96I GGNCC 4 cut(s) 222, 305, 481, 1145
ScaI AGTACT 2 cut(s) 928, 1497
ScrFI CCNGG 8 cut(s) 174, 242, 723, 753, 816, 1032, 1311, 1719
SduI GDGCHC 4 cut(s) 25, 210, 979, 1826
SexAI ACCWGGT 1 cut(s) 721
SfaNI GCATC 2 cut(s) 55, 833
SfcI CTRYAG 1 cut(s) 963
SfuI TTCGAA 1 cut(s) 1802
SgrAI CRCCGGYG 1 cut(s) 194
SinI GGWCC 3 cut(s) 222, 305, 1145
SmlI CTYRAG 1 cut(s) 922
SmoI CTYRAG 1 cut(s) 922
SpeI ACTAGT 1 cut(s) 434
Sse9I AATT 6 cut(s) 738, 867, 894, 981, 1461, 1605
SsiI CCGC 9 cut(s) 139, 166, 169, 498, 658, 744, 1599, 1770, 1830
SspMI CTAG 4 cut(s) 435, 1325, 1470, 1912
SstI GAGCTC 1 cut(s) 25
StyD4I CCNGG 8 cut(s) 172, 240, 721, 751, 814, 1030, 1309, 1717
TaaI ACNGT 7 cut(s) 545, 700, 887, 1003, 1335, 1651, 1846
TaiI ACGT 3 cut(s) 407, 1064, 1676
TaqI TCGA 6 cut(s) 311, 407, 948, 1225, 1725, 1802
TasI AATT 6 cut(s) 738, 867, 894, 981, 1461, 1605
TatI WGTACW 5 cut(s) 504, 767, 918, 926, 1495
TauI GCSGC 4 cut(s) 171, 501, 1601, 1772
TfiI GAWTC 9 cut(s) 281, 661, 989, 1172, 1237, 1343, 1411, 1753, 1886
Tru1I TTAA 4 cut(s) 737, 1010, 1455, 1544
Tru9I TTAA 4 cut(s) 737, 1010, 1455, 1544
TscAI CASTG 6 cut(s) 160, 295, 479, 1258, 1656, 1849
TseFI GTSAC 2 cut(s) 1278, 1561
TseI GCWGC 5 cut(s) 788, 1072, 1601, 1611, 1746
Tsp45I GTSAC 2 cut(s) 1278, 1561
TspDTI ATGAA 2 cut(s) 717, 1748
TspGWI ACGGA 2 cut(s) 214, 297
TspRI CASTG 6 cut(s) 160, 295, 479, 1258, 1656, 1849
Van91I CCANNNNNTGG 1 cut(s) 671
VpaK11BI GGWCC 3 cut(s) 222, 305, 1145
XapI RAATTY 1 cut(s) 1461
XceI RCATGY 2 cut(s) 1121, 1622
XspI CTAG 4 cut(s) 435, 1325, 1470, 1912
ZrmI AGTACT 2 cut(s) 928, 1497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.