Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001322

Physical Location & Seq

Genomic Coordinates Reverse (-)

4943443 .. 4945017

Gene Structure 1575 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G069600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 564 bp

ATGGGGATTCGGTGCTCCTCTTGCCGCGTGCTCCTTCTCTCTCTCAAAATCCTCATTTCCTCTCCTTTTCTGTATATAAATTCCAAAATCCACTTGGCTTTAGCCACTTCTACCTTGCTCAAGGGGTGCTTCTCTTCTCTTCTGTTGGTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGATCTCTTGTTGTTGAGAGTGAGTCCTGGCAGAGCTGAGCTGAGCTGCAAGATGGATTGGTTGCGTAAGTTGAGGAGAGCTTTGCTTTCTTTCTCTGCCAGACTCAAACTGACTAAATCTGTAGGGCGTGATAGCGGTGAGTATGGCGGAGTAGGCGGTCTGCTAAAGCTTCAAGATGATGTACAAATGTGTGGATATCAAGATGTACAGATAATGTGGAACATTTTAAGCAAAGCTCAGCGAGAGGAGATGATGATCATGGCAACAACAACAACTCAGCCAGCCCCCAAGCACAACAACAAGAAGCAAAGACAGCAACCCTCTTGGTCTTTCAAGACTTTCTTTTGGACCAGCCATGCAAAGAGCCCAGTCTTAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

188

Amino Acids

21.01

Weight (kDa)

10.03

Isoelectric Point (pI)

53.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001322)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43150
fragaria_vesca	FvH4_4g06680 FvH4_4g15440 FvH4_4g15440 FvH4_6g28000
malus_domestica	MD09G1230400.v1.1 MD13G1192200.v1.1 MD15G1072200.v1.1 MD15G1072300.v1.1 MD16G1192800.v1.1 MD17G1229300.v1.1
prunus_persica	Prupe.1G012900_v2.0.a1 Prupe.1G012900_v2.0.a1 Prupe.1G069600_v2.0.a1 Prupe.1G424900_v2.0.a1 Prupe.3G106900_v2.0.a1
pyrus_communis	pycom09g14960 pycom13g21000 pycom15g06760 pycom16g16270 pycom17g23170
rosa_chinensis	RchiOBHm_Chr2g0131671 RchiOBHm_Chr4g0416351 RchiOBHm_Chr6g0284921 RchiOBHm_Chr6g0309331
rosa_laevigata	RLG00000004932 RLG00000009341
rosa_multiflora	Rmu_co8318957.1_g000001 Rmu_co8501331.1_g000001 Rmu_sc0001260.1_g000004 Rmu_sc0005217.1_g000009 Rmu_sc0015692.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112710 Rroxscaffold_5G00343560 Rroxscaffold_5G00360200 Rroxscaffold_7G00159480
rosa_rugosa	Rorug02G0298900 Rorug04G0009700 Rorug06G0371100
rosa_samantha	Rh2AG351500 Rh2BG358400 Rh2CG337100 Rh2DG375800 Rh4AG087600 Rh4AG203300 Rh4BG084200 Rh4CG095800 Rh4CG214700 Rh4DG079100 Rh6BG493700 Rh6CG498600
rosa_wichuraiana	Rw2G028550 Rw4G017190 Rw6G042180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	148
AccII	CGCG	1 cut(s)	27
AciI	CCGC	4 cut(s)	25, 318, 330, 339
AcsI	RAATTY	1 cut(s)	79
AfaI	GTAC	2 cut(s)	366, 390
AgsI	TTSAA	2 cut(s)	356, 517
AjnI	CCWGG	1 cut(s)	208
AluBI	AGCT	6 cut(s)	218, 223, 228, 263, 352, 419
AluI	AGCT	6 cut(s)	218, 223, 228, 263, 352, 419
Alw21I	GWGCWC	2 cut(s)	17, 33
ApeKI	GCWGC	1 cut(s)	228
ApoI	RAATTY	1 cut(s)	79
AspS9I	GGNCC	1 cut(s)	531
AsuHPI	GGTGA	1 cut(s)	332
AvaII	GGWCC	1 cut(s)	531
BanI	GGYRCC	1 cut(s)	148
BanII	GRGCYC	1 cut(s)	551
Bbv12I	GWGCWC	2 cut(s)	17, 33
BbvI	GCAGC	1 cut(s)	215
BccI	CCATC	1 cut(s)	229
BciT130I	CCWGG	1 cut(s)	210
BclI	TGATCA	1 cut(s)	438
BfmI	CTRYAG	1 cut(s)	303
BisI	GCNGC	2 cut(s)	25, 229
BlpI	GCTNAGC	3 cut(s)	219, 224, 420
BlsI	GCNGC	2 cut(s)	26, 230
Bme1390I	CCNGG	1 cut(s)	210
Bme18I	GGWCC	1 cut(s)	531
BmgT120I	GGNCC	1 cut(s)	531
BmiI	GGNNCC	1 cut(s)	150
BmrFI	CCNGG	1 cut(s)	210
BmrI	ACTGGG	1 cut(s)	545
BmuI	ACTGGG	1 cut(s)	545
Bpu1102I	GCTNAGC	3 cut(s)	219, 224, 420
BpuEI	CTTGAG	1 cut(s)	104
BsaBI	GATNNNNATC	1 cut(s)	437
Bse1I	ACTGG	1 cut(s)	551
Bse8I	GATNNNNATC	1 cut(s)	437
BseBI	CCWGG	1 cut(s)	210
BseJI	GATNNNNATC	1 cut(s)	437
BseMII	CTCAG	4 cut(s)	210, 215, 434, 473
BseNI	ACTGG	1 cut(s)	551
BseRI	GAGGAG	3 cut(s)	7, 271, 443
BseXI	GCAGC	1 cut(s)	215
Bsh1236I	CGCG	1 cut(s)	27
BshNI	GGYRCC	1 cut(s)	148
BsiHKAI	GWGCWC	2 cut(s)	17, 33
Bsp1286I	GDGCHC	3 cut(s)	17, 33, 551
Bsp1407I	TGTACA	2 cut(s)	364, 388
Bsp143I	GATC	2 cut(s)	184, 438
Bsp1720I	GCTNAGC	3 cut(s)	219, 224, 420
BspACI	CCGC	4 cut(s)	25, 318, 330, 339
BspCNI	CTCAG	4 cut(s)	211, 216, 433, 472
BspFNI	CGCG	1 cut(s)	27
BspLI	GGNNCC	1 cut(s)	150
BspT107I	GGYRCC	1 cut(s)	148
BsrGI	TGTACA	2 cut(s)	364, 388
BsrI	ACTGG	1 cut(s)	551
BssMI	GATC	2 cut(s)	184, 438
Bst2UI	CCWGG	1 cut(s)	210
Bst6I	CTCTTC	2 cut(s)	139, 144
BstAUI	TGTACA	2 cut(s)	364, 388
BstC8I	GCNNGC	2 cut(s)	29, 465
BstDEI	CTNAG	5 cut(s)	219, 224, 420, 459, 556
BstFNI	CGCG	1 cut(s)	27
BstKTI	GATC	2 cut(s)	187, 441
BstMBI	GATC	2 cut(s)	184, 438
BstMWI	GCNNNNNNNGC	3 cut(s)	21, 336, 496
BstNI	CCWGG	1 cut(s)	210
BstSCI	CCNGG	1 cut(s)	208
BstSFI	CTRYAG	1 cut(s)	303
BstUI	CGCG	1 cut(s)	27
BstV1I	GCAGC	1 cut(s)	215
Cac8I	GCNNGC	2 cut(s)	29, 465
Cfr13I	GGNCC	1 cut(s)	531
Csp6I	GTAC	2 cut(s)	365, 389
CviAII	CATG	2 cut(s)	442, 539
CviQI	GTAC	2 cut(s)	365, 389
DdeI	CTNAG	5 cut(s)	219, 224, 420, 459, 556
DpnI	GATC	2 cut(s)	186, 440
DpnII	GATC	2 cut(s)	184, 438
Eam1104I	CTCTTC	2 cut(s)	139, 144
EarI	CTCTTC	2 cut(s)	139, 144
EciI	GGCGGA	1 cut(s)	345
Eco24I	GRGCYC	1 cut(s)	551
Eco32I	GATATC	1 cut(s)	380
Eco47I	GGWCC	1 cut(s)	531
EcoRII	CCWGG	1 cut(s)	208
EcoRV	GATATC	1 cut(s)	380
EcoT38I	GRGCYC	1 cut(s)	551
FaeI	CATG	2 cut(s)	445, 542
FaiI	YATR	6 cut(s)	75, 77, 183, 327, 443, 540
FalI	AAGNNNNNCTT	4 cut(s)	113, 145, 509, 541
FatI	CATG	2 cut(s)	441, 538
FbaI	TGATCA	1 cut(s)	438
Fnu4HI	GCNGC	2 cut(s)	25, 229
FriOI	GRGCYC	1 cut(s)	551
Fsp4HI	GCNGC	2 cut(s)	25, 229
GluI	GCNGC	2 cut(s)	25, 229
Hin1II	CATG	2 cut(s)	445, 542
HindIII	AAGCTT	1 cut(s)	350
HinfI	GANTC	3 cut(s)	7, 205, 285
HphI	GGTGA	1 cut(s)	332
Hpy188III	TCNNGA	3 cut(s)	356, 383, 517
HpyAV	CCTTC	1 cut(s)	44
HpyCH4V	TGCA	2 cut(s)	231, 542
HpyF10VI	GCNNNNNNNGC	3 cut(s)	21, 336, 496
HpyF3I	CTNAG	5 cut(s)	219, 224, 420, 459, 556
Hsp92II	CATG	2 cut(s)	445, 542
Ksp22I	TGATCA	1 cut(s)	438
Kzo9I	GATC	2 cut(s)	184, 438
LmnI	GCTCC	2 cut(s)	20, 36
LpnPI	CCDG	5 cut(s)	195, 222, 295, 477, 547
Lsp1109I	GCAGC	1 cut(s)	215
MalI	GATC	2 cut(s)	186, 440
MboI	GATC	2 cut(s)	184, 438
MboII	GAAGA	2 cut(s)	126, 131
MhlI	GDGCHC	3 cut(s)	17, 33, 551
MluCI	AATT	1 cut(s)	79
MlyI	GAGTC	2 cut(s)	214, 279
MnlI	CCTC	7 cut(s)	28, 62, 70, 162, 249, 421, 514
MseI	TTAA	1 cut(s)	410
MspR9I	CCNGG	1 cut(s)	210
MvaI	CCWGG	1 cut(s)	210
MvnI	CGCG	1 cut(s)	27
MwoI	GCNNNNNNNGC	3 cut(s)	21, 336, 496
NdeII	GATC	2 cut(s)	184, 438
NlaIII	CATG	2 cut(s)	445, 542
NlaIV	GGNNCC	1 cut(s)	150
PfeI	GAWTC	1 cut(s)	7
PkrI	GCNGC	2 cut(s)	26, 230
PleI	GAGTC	2 cut(s)	213, 279
PpsI	GAGTC	2 cut(s)	213, 279
Psp6I	CCWGG	1 cut(s)	208
PspGI	CCWGG	1 cut(s)	208
PspN4I	GGNNCC	1 cut(s)	150
PspPI	GGNCC	1 cut(s)	531
RsaI	GTAC	2 cut(s)	366, 390
RsaNI	GTAC	2 cut(s)	365, 389
SaqAI	TTAA	1 cut(s)	410
SatI	GCNGC	2 cut(s)	25, 229
Sau3AI	GATC	2 cut(s)	184, 438
Sau96I	GGNCC	1 cut(s)	531
SchI	GAGTC	2 cut(s)	214, 279
ScrFI	CCNGG	1 cut(s)	210
SduI	GDGCHC	3 cut(s)	17, 33, 551
SetI	ASST	7 cut(s)	116, 220, 225, 230, 265, 354, 421
SfcI	CTRYAG	1 cut(s)	303
SinI	GGWCC	1 cut(s)	531
SmlI	CTYRAG	1 cut(s)	119
SmoI	CTYRAG	1 cut(s)	119
Sse9I	AATT	1 cut(s)	79
SsiI	CCGC	4 cut(s)	25, 318, 330, 339
StyD4I	CCNGG	1 cut(s)	208
TasI	AATT	1 cut(s)	79
TatI	WGTACW	2 cut(s)	364, 388
TauI	GCSGC	1 cut(s)	27
TfiI	GAWTC	1 cut(s)	7
Tru1I	TTAA	1 cut(s)	410
Tru9I	TTAA	1 cut(s)	410
TseI	GCWGC	1 cut(s)	228
VpaK11BI	GGWCC	1 cut(s)	531
XapI	RAATTY	1 cut(s)	79
XcmI	CCANNNNNNNNNTGG	1 cut(s)	91

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.