Prupe.2G035200_v2.0.a1

Protein NRT1 PTR FAMILY

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
3785982 .. 3789448
3467 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G035200.3

Sequence Viewer

Length: 1716 bp
ATGGCTACCTCTGGCGCTGCACCACCATTAAGGATTCAAAATTACCATGAAGACGGAGAGCAGAATCTCATCAGCCAAGAAGAACTTTCCAGTTCCAGAGGTGGCTGGGGTGCTGCTATTTTCATCATCCTTGTTGAGGTGGCAGAGAGATTTGCTTACTATGGTATGGCTGGTAACCTCATCACATACCTCACAAATGAACTCCATGAGCCAATCCCCATGGCTGCAAAAAATGTAAATACTTGGGTTGGAGTCTCATCTCTCCTCCCATTACTTGGAGCCTTCATAGCTGATGCCTTTCTTGGCAGATTCAGCACCATCTTTGTCTCCTCCATCATATATTTACTGGCAATGGTACTGCTAACCATAACAGTTTCAGTAATTCCTCTGCATTATCAGAAGGCAATGTTCTTTGTAGCACTTTACATGTTGTCAGTTGGACTAGCTGGGCACAAACCCTGTGTGCAAACCTTTGCAGCAGACCAGTTTCGTGAAGACTCACCGGAGGAGAAAAAGGCGAAGAGCTCATTCTTCAACTGGTGGTACTTGGGGATCACAGTTGGTGCCTCTGCTGCCATTTTAGTAGTCATATATGTGCAGGATAATGTTGGGTGGGCGGCAGGGTTTGGCATATTGACAGGGGCAATGGCGGTAGCTTTGGCTGTGTTTCTGTTTGGTTACAAGAAATACAGAAAGCAGGGACCCTTAGGCAGCCCCTTCACCACGGTGGCTCAGGTGTTTGTGGCGGCGGTGAGGAAGCGGCACATCAATGGAACATCCGCTGGTTTTGGTGTGTATTCTAGAGATGACAAGGATCAGCATGAGACTAGGAGGCTTTTGGCACAGACCAGTCAATTGAGATGCTTGGACAAGGCAATTATCATCGACCATCTTGATGCTTCAAGCAAGAACAGAAATCCGTGGAGGTTATGCTCACTAAATCAAGTAGAAGAAGTAAAGCTCGTCCTACGGCTCATTCCCGTATGGATGTGTTGCTTATTGTTTGCAGTAGTCCAATCCTTTGTTCAGACGTTCTTCACCAAGCAAGGAAGCACGATGGTCCGGTCAATTGGTCCAAACTTTAAGCTTCCCCAAGCATCACTACAAATATTCCTTGGCCTCACAATTGCAGTTGCAATACCAATCTATGACCGTGTTTTCGTCCCAACAGCCCGAAAATTCACGGGACACTCCTCTGGCATCACCATCCTACAAAGAATTGGCATTGGCCTATTTCTATCCATAATCAGTATGATGGTGGCAGCTTTGGTAGAAGCCAAAAGGGTTGGCATTGTTATAGACCACAACCTCTTGGACAACCCGAAAGCAATAGTGCCAATGAGAGTGTGGTGGTTAATTCCACAGTACATGGTATGTGGTTTGTCTGATGTATTCGCATTTGTTGGGCTCCAAGAATTCTTCTATGGTCAAACACCGGAGGCAATGAGAAGCATGGGAGCAGCAGCATACCTCAGTGTGGTAGGTGTTGGAAACTTCATATGCAGTGCTATAATAACTTCGGTACAAGCAATTAGCTCAAAGTCTGGTGAAAAGTGGCTTACTGACAATCTCAATCGTGCCCACCTAGATTACTTCTATTGGCTAATTGCAGCATTGAGCACTTTAAATTTGTGTGTTTATGTGTGGATTGCTAAAGGTTTCGTATACAAAAAACTTGAAGCTGAAGAAACCGGTAAGGAGAAAGAGCTGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

572

Amino Acids

63.09

Weight (kDa)

8.99

Isoelectric Point (pI)

31.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 563
AccB7I CCANNNNNTGG 1 cut(s) 275
AccI GTMKAC 1 cut(s) 1665
AciI CCGC 6 cut(s) 617, 650, 746, 749, 760, 780
AclWI GGATC 2 cut(s) 560, 822
AcsI RAATTY 3 cut(s) 1178, 1415, 1627
AcuI CTGAAG 1 cut(s) 1704
AfaI GTAC 4 cut(s) 357, 545, 1367, 1524
AfiI CCNNNNNNNGG 3 cut(s) 136, 275, 1477
AflIII ACRYGT 1 cut(s) 426
AgeI ACCGGT 1 cut(s) 1691
AgsI TTSAA 4 cut(s) 38, 535, 903, 1679
AjuI GAANNNNNNNTTGG 2 cut(s) 1008, 1040
AleI CACNNNNGTG 1 cut(s) 725
Alw21I GWGCWC 2 cut(s) 527, 1622
Alw26I GTCTC 3 cut(s) 259, 331, 818
AlwI GGATC 2 cut(s) 560, 822
AoxI GGCC 2 cut(s) 1117, 1228
ApoI RAATTY 3 cut(s) 1178, 1415, 1627
ArsI GACNNNNNNTTYG 2 cut(s) 1142, 1174
AsiGI ACCGGT 1 cut(s) 1691
AspLEI GCGC 1 cut(s) 17
AspS9I GGNCC 3 cut(s) 701, 1060, 1073
AsuHPI GGTGA 6 cut(s) 492, 712, 763, 1030, 1195, 1559
AvaII GGWCC 3 cut(s) 701, 1060, 1073
AxyI CCTNAGG 1 cut(s) 706
BaeGI GKGCMC 2 cut(s) 453, 1582
BanI GGYRCC 1 cut(s) 563
BanII GRGCYC 2 cut(s) 527, 1410
BbsI GAAGAC 2 cut(s) 57, 501
Bbv12I GWGCWC 2 cut(s) 527, 1622
BccI CCATC 6 cut(s) 326, 341, 897, 1051, 1214, 1249
BceAI ACGGC 1 cut(s) 986
BcoDI GTCTC 3 cut(s) 259, 331, 818
BfaI CTAG 4 cut(s) 443, 801, 828, 1586
BfoI RGCGCY 1 cut(s) 18
Bme18I GGWCC 3 cut(s) 701, 1060, 1073
BmgT120I GGNCC 3 cut(s) 701, 1060, 1073
BmiI GGNNCC 5 cut(s) 280, 565, 702, 703, 1409
BmsI GCATC 5 cut(s) 283, 851, 886, 1106, 1209
BpiI GAAGAC 2 cut(s) 57, 501
Bpu10I CCTNAGC 1 cut(s) 732
BsaJI CCNNGG 4 cut(s) 219, 723, 920, 1114
BsaWI WCCGGW 4 cut(s) 502, 1062, 1435, 1691
Bsc4I CCNNNNNNNGG 3 cut(s) 136, 275, 1477
Bse118I RCCGGY 1 cut(s) 1691
Bse1I ACTGG 5 cut(s) 90, 351, 484, 542, 849
Bse21I CCTNAGG 1 cut(s) 706
Bse3DI GCAATG 4 cut(s) 357, 411, 651, 1449
BseDI CCNNGG 4 cut(s) 219, 723, 920, 1114
BseGI GGATG 4 cut(s) 126, 776, 993, 1206
BseLI CCNNNNNNNGG 3 cut(s) 136, 275, 1477
BseMI GCAATG 4 cut(s) 357, 411, 651, 1449
BseMII CTCAG 2 cut(s) 746, 1486
BseNI ACTGG 5 cut(s) 90, 351, 484, 542, 849
BseRI GAGGAG 4 cut(s) 254, 319, 521, 1183
BseSI GKGCMC 2 cut(s) 453, 1582
BseYI CCCAGC 2 cut(s) 105, 446
BsgI GTGCAG 1 cut(s) 617
BshFI GGCC 2 cut(s) 1119, 1230
BshNI GGYRCC 1 cut(s) 563
BshTI ACCGGT 1 cut(s) 1691
BsiHKAI GWGCWC 2 cut(s) 527, 1622
BsiSI CCGG 4 cut(s) 503, 1063, 1436, 1692
BslFI GGGAC 3 cut(s) 714, 1148, 1200
BslI CCNNNNNNNGG 3 cut(s) 136, 275, 1477
BsmAI GTCTC 3 cut(s) 259, 331, 818
BsmFI GGGAC 3 cut(s) 714, 1148, 1200
BsnI GGCC 2 cut(s) 1119, 1230
Bsp1286I GDGCHC 5 cut(s) 453, 527, 1410, 1582, 1622
Bsp143I GATC 2 cut(s) 552, 814
Bsp19I CCATGG 1 cut(s) 219
BspACI CCGC 6 cut(s) 617, 650, 746, 749, 760, 780
BspANI GGCC 2 cut(s) 1119, 1230
BspCNI CTCAG 2 cut(s) 745, 1485
BspLI GGNNCC 5 cut(s) 280, 565, 702, 703, 1409
BspPI GGATC 2 cut(s) 560, 822
BspQI GCTCTTC 1 cut(s) 515
BspT107I GGYRCC 1 cut(s) 563
BsrDI GCAATG 4 cut(s) 357, 411, 651, 1449
BsrFI RCCGGY 1 cut(s) 1691
BsrI ACTGG 5 cut(s) 90, 351, 484, 542, 849
BssAI RCCGGY 1 cut(s) 1691
BssECI CCNNGG 4 cut(s) 219, 723, 920, 1114
BssMI GATC 2 cut(s) 552, 814
BssNAI GTATAC 1 cut(s) 1666
BssT1I CCWWGG 2 cut(s) 219, 1114
Bst1107I GTATAC 1 cut(s) 1666
Bst4CI ACNGT 5 cut(s) 373, 559, 727, 1154, 1365
Bst6I CTCTTC 1 cut(s) 515
BstC8I GCNNGC 1 cut(s) 1710
BstDEI CTNAG 3 cut(s) 706, 732, 1472
BstDSI CCRYGG 3 cut(s) 219, 723, 920
BstEII GGTNACC 1 cut(s) 173
BstENI CCTNNNNNAGG 1 cut(s) 134
BstF5I GGATG 4 cut(s) 126, 776, 993, 1206
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 2 cut(s) 555, 817
BstMAI GTCTC 3 cut(s) 259, 331, 818
BstMBI GATC 2 cut(s) 552, 814
BstMWI GCNNNNNNNGC 3 cut(s) 287, 312, 572
BstNSI RCATGY 1 cut(s) 430
BstPI GGTNACC 1 cut(s) 173
BstSLI GKGCMC 2 cut(s) 453, 1582
BstV2I GAAGAC 2 cut(s) 57, 501
BstZ17I GTATAC 1 cut(s) 1666
Bsu36I CCTNAGG 1 cut(s) 706
BsuRI GGCC 2 cut(s) 1119, 1230
BtgI CCRYGG 3 cut(s) 219, 723, 920
BtsCI GGATG 4 cut(s) 126, 776, 993, 1206
BtsI GCAGTG 1 cut(s) 1510
BtsIMutI CAGTG 2 cut(s) 1480, 1510
Cac8I GCNNGC 1 cut(s) 1710
CfoI GCGC 1 cut(s) 17
Cfr10I RCCGGY 1 cut(s) 1691
Cfr13I GGNCC 3 cut(s) 701, 1060, 1073
Csp6I GTAC 4 cut(s) 356, 544, 1366, 1523
CspAI ACCGGT 1 cut(s) 1691
CviAII CATG 7 cut(s) 47, 206, 220, 427, 821, 1369, 1453
CviQI GTAC 4 cut(s) 356, 544, 1366, 1523
DdeI CTNAG 3 cut(s) 706, 732, 1472
DpnI GATC 2 cut(s) 554, 816
DpnII GATC 2 cut(s) 552, 814
DraI TTTAAA 1 cut(s) 1626
Eam1104I CTCTTC 1 cut(s) 515
EarI CTCTTC 1 cut(s) 515
Ecl136II GAGCTC 1 cut(s) 525
Eco130I CCWWGG 2 cut(s) 219, 1114
Eco24I GRGCYC 2 cut(s) 527, 1410
Eco47I GGWCC 3 cut(s) 701, 1060, 1073
Eco53kI GAGCTC 1 cut(s) 525
Eco57I CTGAAG 1 cut(s) 1704
Eco81I CCTNAGG 1 cut(s) 706
Eco91I GGTNACC 1 cut(s) 173
EcoICRI GAGCTC 1 cut(s) 525
EcoNI CCTNNNNNAGG 1 cut(s) 134
EcoO109I RGGNCCY 1 cut(s) 701
EcoO65I GGTNACC 1 cut(s) 173
EcoRI GAATTC 1 cut(s) 1415
EcoT14I CCWWGG 2 cut(s) 219, 1114
EcoT38I GRGCYC 2 cut(s) 527, 1410
ErhI CCWWGG 2 cut(s) 219, 1114
FaeI CATG 7 cut(s) 50, 209, 223, 430, 824, 1372, 1456
FalI AAGNNNNNCTT 2 cut(s) 69, 101
FaqI GGGAC 3 cut(s) 714, 1148, 1200
FatI CATG 7 cut(s) 46, 205, 219, 426, 820, 1368, 1452
FauNDI CATATG 1 cut(s) 1499
FblI GTMKAC 1 cut(s) 1665
FokI GGATG 4 cut(s) 113, 763, 1000, 1193
FriOI GRGCYC 2 cut(s) 527, 1410
FspBI CTAG 4 cut(s) 443, 801, 828, 1586
GlaI GCGC 1 cut(s) 16
GsaI CCCAGC 2 cut(s) 109, 450
HaeII RGCGCY 1 cut(s) 18
HaeIII GGCC 2 cut(s) 1119, 1230
HapII CCGG 4 cut(s) 503, 1063, 1436, 1692
HhaI GCGC 1 cut(s) 17
Hin1II CATG 7 cut(s) 50, 209, 223, 430, 824, 1372, 1456
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 1085
HinfI GANTC 5 cut(s) 34, 64, 252, 309, 497
HpaII CCGG 4 cut(s) 503, 1063, 1436, 1692
HphI GGTGA 6 cut(s) 492, 712, 763, 1030, 1195, 1559
Hpy166II GTNNAC 1 cut(s) 1666
Hpy188I TCNGA 3 cut(s) 399, 1029, 1387
Hpy188III TCNNGA 4 cut(s) 96, 491, 801, 893
Hpy8I GTNNAC 1 cut(s) 1666
HpyAV CCTTC 3 cut(s) 292, 394, 727
HpyCH4III ACNGT 5 cut(s) 373, 559, 727, 1154, 1365
HpyCH4IV ACGT 1 cut(s) 1031
HpyF10VI GCNNNNNNNGC 3 cut(s) 287, 312, 572
HpyF3I CTNAG 3 cut(s) 706, 732, 1472
HpySE526I ACGT 1 cut(s) 1031
Hsp92II CATG 7 cut(s) 50, 209, 223, 430, 824, 1372, 1456
HspAI GCGC 1 cut(s) 15
KflI GGGWCCC 1 cut(s) 701
Kzo9I GATC 2 cut(s) 552, 814
LguI GCTCTTC 1 cut(s) 515
LmnI GCTCC 3 cut(s) 278, 1413, 1457
LweI GCATC 5 cut(s) 283, 851, 886, 1106, 1209
MaeI CTAG 4 cut(s) 443, 801, 828, 1586
MaeII ACGT 1 cut(s) 1031
MaeIII GTNAC 2 cut(s) 173, 677
MalI GATC 2 cut(s) 554, 816
MboI GATC 2 cut(s) 552, 814
MboII GAAGA 9 cut(s) 62, 92, 506, 523, 532, 962, 1027, 1411, 1697
MfeI CAATTG 3 cut(s) 854, 1068, 1125
MhlI GDGCHC 5 cut(s) 453, 527, 1410, 1582, 1622
MlyI GAGTC 2 cut(s) 261, 491
MmeI TCCRAC 3 cut(s) 229, 418, 1468
MseI TTAA 5 cut(s) 29, 1083, 1355, 1625, 1714
MslI CAYNNNNRTG 4 cut(s) 593, 725, 768, 894
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 4 cut(s) 503, 1063, 1436, 1692
MunI CAATTG 3 cut(s) 854, 1068, 1125
MwoI GCNNNNNNNGC 3 cut(s) 287, 312, 572
NcoI CCATGG 1 cut(s) 219
NdeI CATATG 1 cut(s) 1499
NdeII GATC 2 cut(s) 552, 814
NlaIII CATG 7 cut(s) 50, 209, 223, 430, 824, 1372, 1456
NlaIV GGNNCC 5 cut(s) 280, 565, 702, 703, 1409
NspI RCATGY 1 cut(s) 430
OliI CACNNNNGTG 1 cut(s) 725
PciI ACATGT 1 cut(s) 426
PciSI GCTCTTC 1 cut(s) 515
PfeI GAWTC 3 cut(s) 34, 64, 309
PflMI CCANNNNNTGG 1 cut(s) 275
PinAI ACCGGT 1 cut(s) 1691
PleI GAGTC 2 cut(s) 260, 491
PpsI GAGTC 2 cut(s) 260, 491
PpuMI RGGWCCY 1 cut(s) 701
PscI ACATGT 1 cut(s) 426
Psp124BI GAGCTC 1 cut(s) 527
Psp5II RGGWCCY 1 cut(s) 701
PspEI GGTNACC 1 cut(s) 173
PspFI CCCAGC 2 cut(s) 105, 446
PspN4I GGNNCC 5 cut(s) 280, 565, 702, 703, 1409
PspPI GGNCC 3 cut(s) 701, 1060, 1073
PspPPI RGGWCCY 1 cut(s) 701
RsaI GTAC 4 cut(s) 357, 545, 1367, 1524
RsaNI GTAC 4 cut(s) 356, 544, 1366, 1523
RseI CAYNNNNRTG 4 cut(s) 593, 725, 768, 894
SacI GAGCTC 1 cut(s) 527
SapI GCTCTTC 1 cut(s) 515
SaqAI TTAA 5 cut(s) 29, 1083, 1355, 1625, 1714
Sau3AI GATC 2 cut(s) 552, 814
Sau96I GGNCC 3 cut(s) 701, 1060, 1073
SchI GAGTC 2 cut(s) 261, 491
SduI GDGCHC 5 cut(s) 453, 527, 1410, 1582, 1622
SfaNI GCATC 5 cut(s) 283, 851, 886, 1106, 1209
SinI GGWCC 3 cut(s) 701, 1060, 1073
SmiMI CAYNNNNRTG 4 cut(s) 593, 725, 768, 894
SsiI CCGC 6 cut(s) 617, 650, 746, 749, 760, 780
SspI AATATT 1 cut(s) 1110
SspMI CTAG 4 cut(s) 443, 801, 828, 1586
SstI GAGCTC 1 cut(s) 527
StyI CCWWGG 2 cut(s) 219, 1114
TaaI ACNGT 5 cut(s) 373, 559, 727, 1154, 1365
TaiI ACGT 1 cut(s) 1034
TaqI TCGA 1 cut(s) 885
TatI WGTACW 1 cut(s) 1365
TauI GCSGC 3 cut(s) 620, 749, 763
TfiI GAWTC 3 cut(s) 34, 64, 309
Tru1I TTAA 5 cut(s) 29, 1083, 1355, 1625, 1714
Tru9I TTAA 5 cut(s) 29, 1083, 1355, 1625, 1714
TscAI CASTG 2 cut(s) 1480, 1510
TspDTI ATGAA 5 cut(s) 63, 112, 213, 274, 1486
TspGWI ACGGA 2 cut(s) 69, 909
TspRI CASTG 2 cut(s) 1480, 1510
Van91I CCANNNNNTGG 1 cut(s) 275
VpaK11BI GGWCC 3 cut(s) 701, 1060, 1073
XagI CCTNNNNNAGG 1 cut(s) 134
XapI RAATTY 3 cut(s) 1178, 1415, 1627
XbaI TCTAGA 1 cut(s) 800
XceI RCATGY 1 cut(s) 430
XcmI CCANNNNNNNNNTGG 1 cut(s) 1344
XmiI GTMKAC 1 cut(s) 1665
XspI CTAG 4 cut(s) 443, 801, 828, 1586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.