Rroxscaffold_4G00325910

Protein NRT1 PTR FAMILY

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000830
Physical Location & Seq
Forward (+)
57932226 .. 57938990
6765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00325910.1

Sequence Viewer

Length: 1632 bp
ATGCGAGGGATGGGTTTCGGTGGAGAGAGGGTGAAATCCACCGGGCACTTAGGTGAGGAGCTGGGCTCACTTCAATTGGATGAGGGATTTTCTTTTGAGTTGGATGCGAAGATGAATTCAATGCATGTTTCTAAAATAGAAGCTACTGGATTGGAATTAGTCCTAATTAAACTGAAAAAGAATTATTATGAATCGGTGAAGTTGTGCAAGATGGAATGCGACCTCTGGCCAGTGAACAATGACCCAGAAAACCCTCAAAACATTATACCTGGGACATCTCCGACGAAAGTCATGATTGTATACACCAAGCTCTCCACCCTCCAAAAACCCACTCGAGGTGGCTGGGATGCTGCTATTTTCATCATCTTTGTAGAGGCAGCAGAGAGGTTTGCGTATTATGGCTTATCTGGTAACCTCATCATATACCTCACAAATTATCTTCACCAGCCCACAGCCATCGCAGCCAAGAACGTCAACATATGGATCGGTGTGTCGTCCCTCTTTGCTCTTCTTGGCGCCATTGTAGCCGATTCTTTCCTGGGTCGGTTCAAGACCATCATTTTATCCACCTCCATTTATTTGATGGGAATGGTTTTACTATGCCTATCCGTCTCCAGTGTTCCTATTCATTATCGTGAAGCAGTGTTCTTTGTTGCGCTTTACATTTTGTCAGTTGGCGAAGGTGGGCACAAGCCTTGCGTCCAAACATTTGCTGCAGATCAGTTTGATGAGGACACCCCGATCAGAAAAGGACAAAGAGCTCATTCTTCAACTGGTGGAATCAAGAGATATAGGAACAAAGGACCGCTTGGAAGCGCCTTTACCACCGTGGCGCAAGTTTTCATGGCGGCAGCAAGGAAGTGGCGTGTGGATGAGACGCTTCATTCTGATATTTTCTACGAGGATGAGAGGAGTGGATCTCATATGGGAGTTCAGCTTCAATCGCAACTCCATACCTACTTCACGAAACAAGGCTCCATGATGATCAGATCCATCGGATCCCACTTTCGCCTTCCCCCCGCATCACTCCAAGCCCTAGTTGGCATCGTGATCGTTATCACCGTCCCAATCTATGACCGGATTATTGTCCCAAAAGCACGAGAGTTCACAGGACATCCAGCGGGCATAATGGTGCTCCAACGAATTGGGGTTGGCCTATTCTTGTCTGTAGTCAACATGGTTGTGGCAGCTCTAGTGGAAGCCAAAAGGGTTAGTGTTGCAAGAGAACATGACCTCATGGATGATCCTGATGCAATAGTACCAATGAGAGTATGGTGGTTGCTCCCACAATACATACTAACCGGTATGTCAGACGCATTCACGGTTGTAGGACTCCAGGAATTGTTCTATCATCAAATGCCAGATGCAATGAGGAGCTTGGGAGCTGCTGCGTACATTAGCATTCTTGGAGTTGGAAGCTTTGTTAGCAGTTTCATCATATCATTGGTGGAAGCTATTAGCAGAAACTCTGGTGAGCCGTGGTTAGGTAACAATATCAACCAAGCGCACCTTGATGACTTCTACTGGGTACTTGCAGGACTAAGCGCTCTATTTTTTGGTGTTTATGTGTGGGTTGCAACATGTTTTGTGTACAAGAAAGTTGTTGGGGAAGAAACAAGTGGGGTGGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

543

Amino Acids

59.92

Weight (kDa)

6.93

Isoelectric Point (pI)

33.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 115 - 243 2.1e-06 Major Facilitator Superfamily
PTR2 PF00854 183 - 252 5.5e-15 POT family
PTR2 PF00854 313 - 488 3.3e-36 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 515
AccI GTMKAC 1 cut(s) 300
AciI CCGC 4 cut(s) 806, 848, 1020, 1121
AclWI GGATC 6 cut(s) 491, 925, 984, 993, 1006, 1238
AcoI YGGCCR 1 cut(s) 227
AcsI RAATTY 1 cut(s) 115
AcyI GRCGYC 1 cut(s) 516
AfaI GTAC 4 cut(s) 1260, 1394, 1530, 1592
AfeI AGCGCT 1 cut(s) 1546
AfiI CCNNNNNNNGG 2 cut(s) 335, 1484
AflIII ACRYGT 1 cut(s) 1580
AgeI ACCGGT 1 cut(s) 1301
AgsI TTSAA 5 cut(s) 74, 120, 550, 771, 941
AjnI CCWGG 3 cut(s) 268, 537, 1335
AleI CACNNNNGTG 1 cut(s) 51
Alw21I GWGCWC 2 cut(s) 763, 1137
Alw26I GTCTC 2 cut(s) 616, 869
AlwI GGATC 6 cut(s) 491, 925, 984, 993, 1006, 1238
Ama87I CYCGRG 1 cut(s) 333
Aor51HI AGCGCT 1 cut(s) 1546
AoxI GGCC 2 cut(s) 227, 1153
ApeKI GCWGC 8 cut(s) 350, 377, 461, 713, 851, 1187, 1385, 1388
ApoI RAATTY 1 cut(s) 115
AsiGI ACCGGT 1 cut(s) 1301
AspLEI GCGC 6 cut(s) 518, 658, 818, 835, 1507, 1547
AspS9I GGNCC 1 cut(s) 803
AsuC2I CCSGG 1 cut(s) 43
AsuHPI GGTGA 6 cut(s) 43, 65, 208, 434, 1051, 1484
AvaI CYCGRG 1 cut(s) 333
AvaII GGWCC 1 cut(s) 803
BaeGI GKGCMC 2 cut(s) 48, 690
BalI TGGCCA 1 cut(s) 229
BamHI GGATCC 1 cut(s) 998
BanI GGYRCC 1 cut(s) 515
BanII GRGCYC 2 cut(s) 68, 763
BarI GAAGNNNNNNTAC 2 cut(s) 805, 837
BauI CACGAG 1 cut(s) 1098
Bbv12I GWGCWC 2 cut(s) 763, 1137
BbvI GCAGC 8 cut(s) 337, 389, 473, 700, 863, 1199, 1372, 1375
BccI CCATC 6 cut(s) 4, 205, 464, 563, 577, 1001
BceAI ACGGC 1 cut(s) 1462
BcgI CGANNNNNNTGC 2 cut(s) 1033, 1067
BciT130I CCWGG 3 cut(s) 270, 539, 1337
BclI TGATCA 1 cut(s) 984
BcnI CCSGG 1 cut(s) 43
BcoDI GTCTC 2 cut(s) 616, 869
BfaI CTAG 2 cut(s) 1037, 1193
BfmI CTRYAG 2 cut(s) 714, 1167
BfoI RGCGCY 3 cut(s) 519, 819, 1548
BisI GCNGC 9 cut(s) 351, 378, 462, 714, 849, 852, 1188, 1386, 1389
BlsI GCNGC 9 cut(s) 352, 379, 463, 715, 850, 853, 1189, 1387, 1390
Bme1390I CCNGG 4 cut(s) 43, 270, 539, 1337
Bme18I GGWCC 1 cut(s) 803
BmeT110I CYCGRG 1 cut(s) 333
BmgT120I GGNCC 1 cut(s) 803
BmiI GGNNCC 3 cut(s) 517, 976, 1000
BmrFI CCNGG 4 cut(s) 43, 270, 539, 1337
BmrI ACTGGG 1 cut(s) 1534
BmsI GCATC 6 cut(s) 94, 337, 1031, 1053, 1240, 1354
BmuI ACTGGG 1 cut(s) 1534
BoxI GACNNNNGTC 1 cut(s) 287
BplI GAGNNNNNCTC 4 cut(s) 50, 82, 904, 936
BpmI CTGGAG 2 cut(s) 598, 1319
BpuMI CCSGG 1 cut(s) 43
BsaBI GATNNNNATC 1 cut(s) 1055
BsaHI GRCGYC 1 cut(s) 516
BsaJI CCNNGG 4 cut(s) 269, 538, 828, 1478
BsaWI WCCGGW 2 cut(s) 1077, 1301
BsaXI ACNNNNNCTCC 2 cut(s) 15, 45
Bsc4I CCNNNNNNNGG 2 cut(s) 335, 1484
Bse118I RCCGGY 1 cut(s) 1301
Bse1I ACTGG 5 cut(s) 151, 230, 615, 778, 1529
Bse3DI GCAATG 1 cut(s) 1374
Bse8I GATNNNNATC 1 cut(s) 1055
BseBI CCWGG 3 cut(s) 270, 539, 1337
BseDI CCNNGG 4 cut(s) 269, 538, 828, 1478
BseGI GGATG 8 cut(s) 15, 85, 109, 352, 877, 910, 1114, 1246
BseJI GATNNNNATC 1 cut(s) 1055
BseLI CCNNNNNNNGG 2 cut(s) 335, 1484
BseMI GCAATG 1 cut(s) 1374
BseNI ACTGG 5 cut(s) 151, 230, 615, 778, 1529
BseRI GAGGAG 3 cut(s) 71, 925, 1387
BseSI GKGCMC 2 cut(s) 48, 690
BseXI GCAGC 8 cut(s) 337, 389, 473, 700, 863, 1199, 1372, 1375
BseYI CCCAGC 2 cut(s) 61, 342
BshFI GGCC 2 cut(s) 229, 1155
BshNI GGYRCC 1 cut(s) 515
BshTI ACCGGT 1 cut(s) 1301
BsiHKAI GWGCWC 2 cut(s) 763, 1137
BsiHKCI CYCGRG 1 cut(s) 333
BsiSI CCGG 3 cut(s) 42, 1078, 1302
BslFI GGGAC 4 cut(s) 286, 481, 1049, 1073
BslI CCNNNNNNNGG 2 cut(s) 335, 1484
BsmAI GTCTC 2 cut(s) 616, 869
BsmBI CGTCTC 2 cut(s) 616, 869
BsmFI GGGAC 4 cut(s) 286, 481, 1049, 1073
BsmI GAATGC 3 cut(s) 221, 1316, 1401
BsnI GGCC 2 cut(s) 229, 1155
BsoBI CYCGRG 1 cut(s) 333
Bsp1286I GDGCHC 5 cut(s) 48, 68, 690, 763, 1137
Bsp1407I TGTACA 1 cut(s) 1590
Bsp143I GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
BspACI CCGC 4 cut(s) 806, 848, 1020, 1121
BspANI GGCC 2 cut(s) 229, 1155
BspHI TCATGA 1 cut(s) 291
BspLI GGNNCC 3 cut(s) 517, 976, 1000
BspMAI CTGCAG 1 cut(s) 718
BspPI GGATC 6 cut(s) 491, 925, 984, 993, 1006, 1238
BspQI GCTCTTC 1 cut(s) 513
BspT107I GGYRCC 1 cut(s) 515
BsrDI GCAATG 1 cut(s) 1374
BsrFI RCCGGY 1 cut(s) 1301
BsrGI TGTACA 1 cut(s) 1590
BsrI ACTGG 5 cut(s) 151, 230, 615, 778, 1529
BssAI RCCGGY 1 cut(s) 1301
BssECI CCNNGG 4 cut(s) 269, 538, 828, 1478
BssMI GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
BssNAI GTATAC 1 cut(s) 301
BssNI GRCGYC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 1098
Bst1107I GTATAC 1 cut(s) 301
Bst2BI CACGAG 1 cut(s) 1098
Bst2UI CCWGG 3 cut(s) 270, 539, 1337
Bst4CI ACNGT 3 cut(s) 829, 1063, 1324
Bst6I CTCTTC 1 cut(s) 513
BstACI GRCGYC 1 cut(s) 516
BstAUI TGTACA 1 cut(s) 1590
BstC8I GCNNGC 1 cut(s) 1123
BstDEI CTNAG 2 cut(s) 49, 1541
BstDSI CCRYGG 2 cut(s) 828, 1478
BstEII GGTNACC 1 cut(s) 410
BstF5I GGATG 8 cut(s) 15, 85, 109, 352, 877, 910, 1114, 1246
BstH2I RGCGCY 3 cut(s) 519, 819, 1548
BstHHI GCGC 6 cut(s) 518, 658, 818, 835, 1507, 1547
BstKTI GATC 9 cut(s) 486, 721, 744, 920, 987, 992, 1001, 1053, 1246
BstMAI GTCTC 2 cut(s) 616, 869
BstMBI GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
BstMWI GCNNNNNNNGC 4 cut(s) 461, 524, 943, 1425
BstNI CCWGG 3 cut(s) 270, 539, 1337
BstNSI RCATGY 2 cut(s) 128, 1584
BstPAI GACNNNNGTC 1 cut(s) 287
BstPI GGTNACC 1 cut(s) 410
BstSCI CCNGG 4 cut(s) 41, 268, 537, 1335
BstSFI CTRYAG 2 cut(s) 714, 1167
BstSLI GKGCMC 2 cut(s) 48, 690
BstV1I GCAGC 8 cut(s) 337, 389, 473, 700, 863, 1199, 1372, 1375
BstX2I RGATCY 3 cut(s) 917, 989, 998
BstXI CCANNNNNNTGG 1 cut(s) 1145
BstYI RGATCY 3 cut(s) 917, 989, 998
BstZ17I GTATAC 1 cut(s) 301
BsuRI GGCC 2 cut(s) 229, 1155
BtgI CCRYGG 2 cut(s) 828, 1478
BtgZI GCGATG 1 cut(s) 442
BtsCI GGATG 8 cut(s) 15, 85, 109, 352, 877, 910, 1114, 1246
BtsI GCAGTG 1 cut(s) 648
BtsIMutI CAGTG 3 cut(s) 237, 622, 648
Cac8I GCNNGC 1 cut(s) 1123
CciI TCATGA 1 cut(s) 291
CfoI GCGC 6 cut(s) 518, 658, 818, 835, 1507, 1547
Cfr10I RCCGGY 1 cut(s) 1301
Cfr13I GGNCC 1 cut(s) 803
CseI GACGC 3 cut(s) 688, 886, 1322
Csp6I GTAC 4 cut(s) 1259, 1393, 1529, 1591
CspAI ACCGGT 1 cut(s) 1301
CspCI CAANNNNNGTGG 1 cut(s) 1605
CviAII CATG 8 cut(s) 125, 292, 844, 979, 1177, 1229, 1237, 1581
CviQI GTAC 4 cut(s) 1259, 1393, 1529, 1591
DdeI CTNAG 2 cut(s) 49, 1541
DinI GGCGCC 1 cut(s) 517
DpnI GATC 9 cut(s) 485, 720, 743, 919, 986, 991, 1000, 1052, 1245
DpnII GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
EaeI YGGCCR 1 cut(s) 227
Eam1104I CTCTTC 1 cut(s) 513
EarI CTCTTC 1 cut(s) 513
Ecl136II GAGCTC 1 cut(s) 761
Eco24I GRGCYC 2 cut(s) 68, 763
Eco47I GGWCC 1 cut(s) 803
Eco47III AGCGCT 1 cut(s) 1546
Eco53kI GAGCTC 1 cut(s) 761
Eco88I CYCGRG 1 cut(s) 333
Eco91I GGTNACC 1 cut(s) 410
EcoICRI GAGCTC 1 cut(s) 761
EcoO65I GGTNACC 1 cut(s) 410
EcoRI GAATTC 1 cut(s) 115
EcoRII CCWGG 3 cut(s) 268, 537, 1335
EcoT22I ATGCAT 1 cut(s) 126
EcoT38I GRGCYC 2 cut(s) 68, 763
EgeI GGCGCC 1 cut(s) 517
EheI GGCGCC 1 cut(s) 517
Esp3I CGTCTC 2 cut(s) 616, 869
FaeI CATG 8 cut(s) 128, 295, 847, 982, 1180, 1232, 1240, 1584
FalI AAGNNNNNCTT 4 cut(s) 792, 824, 1494, 1526
FaqI GGGAC 4 cut(s) 286, 481, 1049, 1073
FatI CATG 8 cut(s) 124, 291, 843, 978, 1176, 1228, 1236, 1580
FauI CCCGC 2 cut(s) 1027, 1114
FauNDI CATATG 2 cut(s) 479, 924
FbaI TGATCA 1 cut(s) 984
FblI GTMKAC 1 cut(s) 300
Fnu4HI GCNGC 9 cut(s) 351, 378, 462, 714, 849, 852, 1188, 1386, 1389
FokI GGATG 8 cut(s) 22, 92, 116, 359, 884, 917, 1101, 1253
FriOI GRGCYC 2 cut(s) 68, 763
Fsp4HI GCNGC 9 cut(s) 351, 378, 462, 714, 849, 852, 1188, 1386, 1389
FspBI CTAG 2 cut(s) 1037, 1193
GlaI GCGC 6 cut(s) 517, 657, 817, 834, 1506, 1546
GluI GCNGC 9 cut(s) 351, 378, 462, 714, 849, 852, 1188, 1386, 1389
GsaI CCCAGC 2 cut(s) 65, 346
GsuI CTGGAG 2 cut(s) 598, 1319
HaeII RGCGCY 3 cut(s) 519, 819, 1548
HaeIII GGCC 2 cut(s) 229, 1155
HapII CCGG 3 cut(s) 42, 1078, 1302
HgaI GACGC 3 cut(s) 688, 886, 1322
HhaI GCGC 6 cut(s) 518, 658, 818, 835, 1507, 1547
Hin1I GRCGYC 1 cut(s) 516
Hin1II CATG 8 cut(s) 128, 295, 847, 982, 1180, 1232, 1240, 1584
Hin6I GCGC 6 cut(s) 516, 656, 816, 833, 1505, 1545
HinP1I GCGC 6 cut(s) 516, 656, 816, 833, 1505, 1545
HincII GTYRAC 2 cut(s) 475, 1174
HindII GTYRAC 2 cut(s) 475, 1174
HindIII AAGCTT 1 cut(s) 1417
HinfI GANTC 4 cut(s) 191, 530, 780, 1332
HpaII CCGG 3 cut(s) 42, 1078, 1302
HphI GGTGA 6 cut(s) 43, 65, 208, 434, 1051, 1484
Hpy166II GTNNAC 6 cut(s) 235, 301, 475, 1107, 1174, 1591
Hpy188I TCNGA 6 cut(s) 282, 746, 889, 989, 998, 1312
Hpy188III TCNNGA 7 cut(s) 292, 550, 635, 784, 964, 1048, 1247
Hpy8I GTNNAC 6 cut(s) 235, 301, 475, 1107, 1174, 1591
Hpy99I CGWCG 1 cut(s) 286
HpyAV CCTTC 2 cut(s) 674, 1022
HpyCH4III ACNGT 3 cut(s) 829, 1063, 1324
HpyCH4IV ACGT 1 cut(s) 471
HpyCH4V TGCA 8 cut(s) 124, 207, 716, 1220, 1253, 1367, 1535, 1577
HpyF10VI GCNNNNNNNGC 4 cut(s) 461, 524, 943, 1425
HpyF3I CTNAG 2 cut(s) 49, 1541
HpySE526I ACGT 1 cut(s) 471
Hsp92I GRCGYC 1 cut(s) 516
Hsp92II CATG 8 cut(s) 128, 295, 847, 982, 1180, 1232, 1240, 1584
HspAI GCGC 6 cut(s) 516, 656, 816, 833, 1505, 1545
KasI GGCGCC 1 cut(s) 515
Ksp22I TGATCA 1 cut(s) 984
Kzo9I GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
LguI GCTCTTC 1 cut(s) 513
LmnI GCTCC 6 cut(s) 58, 980, 1140, 1287, 1374, 1382
Lsp1109I GCAGC 8 cut(s) 337, 389, 473, 700, 863, 1199, 1372, 1375
LweI GCATC 6 cut(s) 94, 337, 1031, 1053, 1240, 1354
MaeI CTAG 2 cut(s) 1037, 1193
MaeII ACGT 1 cut(s) 471
MaeIII GTNAC 2 cut(s) 410, 1487
MalI GATC 9 cut(s) 485, 720, 743, 919, 986, 991, 1000, 1052, 1245
MboI GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
MboII GAAGA 5 cut(s) 121, 431, 500, 759, 1622
MfeI CAATTG 1 cut(s) 74
MflI RGATCY 3 cut(s) 917, 989, 998
MhlI GDGCHC 5 cut(s) 48, 68, 690, 763, 1137
MlsI TGGCCA 1 cut(s) 229
MluCI AATT 8 cut(s) 74, 115, 155, 165, 181, 433, 1143, 1340
MluNI TGGCCA 1 cut(s) 229
Mly113I GGCGCC 1 cut(s) 516
MlyI GAGTC 1 cut(s) 1326
MmeI TCCRAC 4 cut(s) 81, 305, 1162, 1393
Mox20I TGGCCA 1 cut(s) 229
Mph1103I ATGCAT 1 cut(s) 126
MscI TGGCCA 1 cut(s) 229
MseI TTAA 1 cut(s) 168
MslI CAYNNNNRTG 5 cut(s) 51, 633, 1130, 1181, 1512
Msp20I TGGCCA 1 cut(s) 229
MspA1I CMGCKG 1 cut(s) 1121
MspI CCGG 3 cut(s) 42, 1078, 1302
MspR9I CCNGG 4 cut(s) 43, 270, 539, 1337
MunI CAATTG 1 cut(s) 74
Mva1269I GAATGC 3 cut(s) 221, 1316, 1401
MvaI CCWGG 3 cut(s) 270, 539, 1337
MwoI GCNNNNNNNGC 4 cut(s) 461, 524, 943, 1425
NarI GGCGCC 1 cut(s) 516
NciI CCSGG 1 cut(s) 43
NdeI CATATG 2 cut(s) 479, 924
NdeII GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
NlaIII CATG 8 cut(s) 128, 295, 847, 982, 1180, 1232, 1240, 1584
NlaIV GGNNCC 3 cut(s) 517, 976, 1000
NsiI ATGCAT 1 cut(s) 126
NspI RCATGY 2 cut(s) 128, 1584
OliI CACNNNNGTG 1 cut(s) 51
PaeR7I CTCGAG 1 cut(s) 333
PagI TCATGA 1 cut(s) 291
PciI ACATGT 1 cut(s) 1580
PciSI GCTCTTC 1 cut(s) 513
PcsI WCGNNNNNNNCGW 1 cut(s) 1059
PctI GAATGC 3 cut(s) 221, 1316, 1401
PfeI GAWTC 3 cut(s) 191, 530, 780
PfoI TCCNGGA 1 cut(s) 1335
PinAI ACCGGT 1 cut(s) 1301
PkrI GCNGC 9 cut(s) 352, 379, 463, 715, 850, 853, 1189, 1387, 1390
PleI GAGTC 1 cut(s) 1326
PluTI GGCGCC 1 cut(s) 519
PpsI GAGTC 1 cut(s) 1326
PscI ACATGT 1 cut(s) 1580
PshAI GACNNNNGTC 1 cut(s) 287
Psp124BI GAGCTC 1 cut(s) 763
Psp6I CCWGG 3 cut(s) 268, 537, 1335
PspEI GGTNACC 1 cut(s) 410
PspFI CCCAGC 2 cut(s) 61, 342
PspGI CCWGG 3 cut(s) 268, 537, 1335
PspN4I GGNNCC 3 cut(s) 517, 976, 1000
PspPI GGNCC 1 cut(s) 803
PspXI VCTCGAGB 1 cut(s) 333
PstI CTGCAG 1 cut(s) 718
PsuI RGATCY 3 cut(s) 917, 989, 998
RsaI GTAC 4 cut(s) 1260, 1394, 1530, 1592
RsaNI GTAC 4 cut(s) 1259, 1393, 1529, 1591
RseI CAYNNNNRTG 5 cut(s) 51, 633, 1130, 1181, 1512
SacI GAGCTC 1 cut(s) 763
SapI GCTCTTC 1 cut(s) 513
SaqAI TTAA 1 cut(s) 168
SatI GCNGC 9 cut(s) 351, 378, 462, 714, 849, 852, 1188, 1386, 1389
Sau3AI GATC 9 cut(s) 483, 718, 741, 917, 984, 989, 998, 1050, 1243
Sau96I GGNCC 1 cut(s) 803
SchI GAGTC 1 cut(s) 1326
ScrFI CCNGG 4 cut(s) 43, 270, 539, 1337
SduI GDGCHC 5 cut(s) 48, 68, 690, 763, 1137
SfaNI GCATC 6 cut(s) 94, 337, 1031, 1053, 1240, 1354
SfcI CTRYAG 2 cut(s) 714, 1167
SfoI GGCGCC 1 cut(s) 517
Sfr274I CTCGAG 1 cut(s) 333
SinI GGWCC 1 cut(s) 803
SlaI CTCGAG 1 cut(s) 333
SmiMI CAYNNNNRTG 5 cut(s) 51, 633, 1130, 1181, 1512
SmlI CTYRAG 1 cut(s) 333
SmoI CTYRAG 1 cut(s) 333
Sse9I AATT 8 cut(s) 74, 115, 155, 165, 181, 433, 1143, 1340
SsiI CCGC 4 cut(s) 806, 848, 1020, 1121
SspDI GGCGCC 1 cut(s) 515
SspMI CTAG 2 cut(s) 1037, 1193
SstI GAGCTC 1 cut(s) 763
StyD4I CCNGG 4 cut(s) 41, 268, 537, 1335
TaaI ACNGT 3 cut(s) 829, 1063, 1324
TaiI ACGT 1 cut(s) 474
TaqI TCGA 1 cut(s) 334
TasI AATT 8 cut(s) 74, 115, 155, 165, 181, 433, 1143, 1340
TatI WGTACW 1 cut(s) 1590
TauI GCSGC 1 cut(s) 851
TfiI GAWTC 3 cut(s) 191, 530, 780
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TscAI CASTG 3 cut(s) 237, 622, 648
TseI GCWGC 8 cut(s) 350, 377, 461, 713, 851, 1187, 1385, 1388
TspDTI ATGAA 7 cut(s) 128, 204, 349, 617, 832, 872, 1423
TspGWI ACGGA 1 cut(s) 598
TspRI CASTG 3 cut(s) 237, 622, 648
VpaK11BI GGWCC 1 cut(s) 803
XapI RAATTY 1 cut(s) 115
XceI RCATGY 2 cut(s) 128, 1584
XcmI CCANNNNNNNNNTGG 3 cut(s) 580, 1037, 1269
XhoI CTCGAG 1 cut(s) 333
XmiI GTMKAC 1 cut(s) 300
XspI CTAG 2 cut(s) 1037, 1193
Zsp2I ATGCAT 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.