Protein NRT1 PTR FAMILY
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 36 - 100 | 8.5e-10 | Reverse transcriptase-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 188 |
| AclI | AACGTT | 1 cut(s) | 108 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 295 |
| AgsI | TTSAA | 1 cut(s) | 23 |
| AleI | CACNNNNGTG | 1 cut(s) | 279 |
| AluBI | AGCT | 1 cut(s) | 257 |
| AluI | AGCT | 1 cut(s) | 257 |
| AoxI | GGCC | 3 cut(s) | 145, 189, 386 |
| AspS9I | GGNCC | 1 cut(s) | 387 |
| BbsI | GAAGAC | 1 cut(s) | 65 |
| BccI | CCATC | 2 cut(s) | 107, 235 |
| BisI | GCNGC | 1 cut(s) | 189 |
| BlsI | GCNGC | 1 cut(s) | 190 |
| BmgT120I | GGNCC | 1 cut(s) | 387 |
| BmsI | GCATC | 2 cut(s) | 44, 348 |
| BpiI | GAAGAC | 1 cut(s) | 65 |
| BpuEI | CTTGAG | 2 cut(s) | 32, 123 |
| BsaJI | CCNNGG | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 295 |
| BseDI | CCNNGG | 1 cut(s) | 148 |
| BseGI | GGATG | 2 cut(s) | 35, 339 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 295 |
| BseMII | CTCAG | 1 cut(s) | 285 |
| BseRI | GAGGAG | 1 cut(s) | 29 |
| BsgI | GTGCAG | 1 cut(s) | 370 |
| BshFI | GGCC | 3 cut(s) | 147, 191, 388 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 295 |
| BsnI | GGCC | 3 cut(s) | 147, 191, 388 |
| Bsp143I | GATC | 1 cut(s) | 353 |
| BspACI | CCGC | 1 cut(s) | 188 |
| BspANI | GGCC | 3 cut(s) | 147, 191, 388 |
| BspCNI | CTCAG | 1 cut(s) | 286 |
| BssECI | CCNNGG | 1 cut(s) | 148 |
| BssMI | GATC | 1 cut(s) | 353 |
| Bst4CI | ACNGT | 2 cut(s) | 201, 278 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 41 |
| BstDEI | CTNAG | 1 cut(s) | 294 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 293 |
| BstF5I | GGATG | 2 cut(s) | 35, 339 |
| BstKTI | GATC | 1 cut(s) | 356 |
| BstMBI | GATC | 1 cut(s) | 353 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 41, 194 |
| BstNSI | RCATGY | 1 cut(s) | 215 |
| BstV2I | GAAGAC | 1 cut(s) | 65 |
| BsuRI | GGCC | 3 cut(s) | 147, 191, 388 |
| BtsCI | GGATG | 2 cut(s) | 35, 339 |
| BtsIMutI | CAGTG | 1 cut(s) | 274 |
| Cfr13I | GGNCC | 1 cut(s) | 387 |
| CviAII | CATG | 2 cut(s) | 6, 212 |
| CviJI | RGCY | 6 cut(s) | 10, 147, 191, 245, 257, 388 |
| CviKI_1 | RGCY | 6 cut(s) | 10, 147, 191, 245, 257, 388 |
| DdeI | CTNAG | 1 cut(s) | 294 |
| DpnI | GATC | 1 cut(s) | 355 |
| DpnII | GATC | 1 cut(s) | 353 |
| Eco32I | GATATC | 1 cut(s) | 319 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 293 |
| EcoRV | GATATC | 1 cut(s) | 319 |
| FaeI | CATG | 2 cut(s) | 9, 215 |
| FaiI | YATR | 5 cut(s) | 7, 213, 248, 362, 382 |
| FatI | CATG | 2 cut(s) | 5, 211 |
| Fnu4HI | GCNGC | 1 cut(s) | 189 |
| FokI | GGATG | 2 cut(s) | 22, 326 |
| Fsp4HI | GCNGC | 1 cut(s) | 189 |
| GluI | GCNGC | 1 cut(s) | 189 |
| HaeIII | GGCC | 3 cut(s) | 147, 191, 388 |
| Hin1II | CATG | 2 cut(s) | 9, 215 |
| HinfI | GANTC | 2 cut(s) | 27, 167 |
| Hpy188I | TCNGA | 1 cut(s) | 295 |
| Hpy188III | TCNNGA | 2 cut(s) | 164, 343 |
| HpyAV | CCTTC | 1 cut(s) | 138 |
| HpyCH4III | ACNGT | 2 cut(s) | 201, 278 |
| HpyCH4IV | ACGT | 1 cut(s) | 108 |
| HpyCH4V | TGCA | 6 cut(s) | 35, 70, 197, 262, 351, 364 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 41, 194 |
| HpyF3I | CTNAG | 1 cut(s) | 294 |
| HpySE526I | ACGT | 1 cut(s) | 108 |
| Hsp92II | CATG | 2 cut(s) | 9, 215 |
| Kzo9I | GATC | 1 cut(s) | 353 |
| LpnPI | CCDG | 2 cut(s) | 93, 356 |
| LweI | GCATC | 2 cut(s) | 44, 348 |
| MaeII | ACGT | 1 cut(s) | 108 |
| MaeIII | GTNAC | 1 cut(s) | 214 |
| MalI | GATC | 1 cut(s) | 355 |
| MboI | GATC | 1 cut(s) | 353 |
| MboII | GAAGA | 1 cut(s) | 70 |
| MluCI | AATT | 1 cut(s) | 179 |
| MlyI | GAGTC | 1 cut(s) | 36 |
| MmeI | TCCRAC | 2 cut(s) | 280, 312 |
| MnlI | CCTC | 4 cut(s) | 7, 49, 158, 289 |
| MseI | TTAA | 1 cut(s) | 134 |
| MslI | CAYNNNNRTG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 41, 194 |
| NdeII | GATC | 1 cut(s) | 353 |
| NlaIII | CATG | 2 cut(s) | 9, 215 |
| NmuCI | GTSAC | 1 cut(s) | 214 |
| NspI | RCATGY | 1 cut(s) | 215 |
| OliI | CACNNNNGTG | 1 cut(s) | 279 |
| PfeI | GAWTC | 1 cut(s) | 167 |
| PkrI | GCNGC | 1 cut(s) | 190 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| Psp1406I | AACGTT | 1 cut(s) | 108 |
| PspPI | GGNCC | 1 cut(s) | 387 |
| RseI | CAYNNNNRTG | 1 cut(s) | 279 |
| SaqAI | TTAA | 1 cut(s) | 134 |
| SatI | GCNGC | 1 cut(s) | 189 |
| Sau3AI | GATC | 1 cut(s) | 353 |
| Sau96I | GGNCC | 1 cut(s) | 387 |
| SchI | GAGTC | 1 cut(s) | 36 |
| SetI | ASST | 7 cut(s) | 100, 111, 130, 145, 259, 291, 300 |
| SfaNI | GCATC | 2 cut(s) | 44, 348 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 279 |
| SmlI | CTYRAG | 2 cut(s) | 11, 138 |
| SmoI | CTYRAG | 2 cut(s) | 11, 138 |
| Sse9I | AATT | 1 cut(s) | 179 |
| SsiI | CCGC | 1 cut(s) | 188 |
| TaaI | ACNGT | 2 cut(s) | 201, 278 |
| TaiI | ACGT | 1 cut(s) | 111 |
| TaqI | TCGA | 1 cut(s) | 163 |
| TasI | AATT | 1 cut(s) | 179 |
| TauI | GCSGC | 1 cut(s) | 191 |
| TfiI | GAWTC | 1 cut(s) | 167 |
| Tru1I | TTAA | 1 cut(s) | 134 |
| Tru9I | TTAA | 1 cut(s) | 134 |
| TscAI | CASTG | 1 cut(s) | 281 |
| TseFI | GTSAC | 1 cut(s) | 214 |
| Tsp45I | GTSAC | 1 cut(s) | 214 |
| TspDTI | ATGAA | 1 cut(s) | 120 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| TspRI | CASTG | 1 cut(s) | 281 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 293 |
| XceI | RCATGY | 1 cut(s) | 215 |