Prupe.2G244900_v2.0.a1

sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000810
Physical Location & Seq
Forward (+)
26247014 .. 26252201
5188 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G244900.1

Sequence Viewer

Length: 1215 bp
ATGGCACAGATTCAATTGACTGCTTCAGCCCCTCTTGTACCCTTCAATTGTGGTGCAAAGCAACTGAGTAAATCAGTTCTTGTCTGTTCTTCAAGAAGATGTGCAAGTTTTTCTACACTATCATTCACAAGTTTCAGAAGCACAAAAGTTCGAAACTTTGAATTGGGTGCAAGCACAGCAGCAGCTAGTAATGAAGGTTTCGAAGAGGTGGTTGAAGGTCAACCACTACCAGCTTTGGGCTCTTCTTATACATGGCCGGATAAGAAGCCGTCCCATCGAGACCCACCTCATAAAATGAAGGGCAAGAGCCGTTTGTTCACGATCGGGCTTGTCACCGCCTGGTACTCATCCAACATTGGGGTTCTGCTGCTGAACAAGTACTTACTCAGCAACTATGGCTTCAAGTACCCGATCTTCCTCACCATGTGCCACATGACCGCCTGTTCTTTGCTCAGCTACATAGCAATTGCTTGGATGAAGATGGTTCCTATGCAAACCATTCGATCCCGGGTCCAATTCTTGAAGATCACGGCGCTGAGCCTTGTGTTTTGTGTGTCGGTCGTTTTTGGGAACATTTCGCTTCGGTATTTGCCGGTCTCGTTTAACCAGGCTATTGGGGCCACCACGCCTTTCTTCACTGCGGTCTTCGCCTACTTTATGACTCTCAAAAGGGAAGCTTGGCTCACCTATCTCACCCTCGTTCCTGTTGTTACAGGGGTCATCATTGCAAGTGGGGGTGAACCAAGCTTCCATCTGTTTGGTTTCTTAATTTGTGTCGCAGCAACTGCTGCAAGGGCACTTAAATCAGTGCTTCAAGGGATTTTGCTTTCTTCCGAAGGGGAGAAGCTGAATTCCATGAACCTCCTTCTATATATGGCTCCGATAGCTGTTGTTTTCCTACTTCCTGCAACACTTATCATGGAAGAAAATGTGGTTGGTATAACACTAGCTCTTGCAAGAGATGATGTCAAGATCATATGGTATCTACTATTCAATTCAGCATTGGCATATTTTGTAAATCTGACCAACTTCTTGGTCACAAAACACACCAGTGCTCTGACTCTTCAGGTACTAGGAAATGCTAAAGGAGCTGTAGCTGTGGTGGTCTCAATATTAATTTTTAGAAACCCTGTTTCCGTGACTGGAATGATGGGTTATTCTCTCACAGTCTTTGGAGTGATCCTTTACAGTGAAGCCAAGAAACGAAGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

405

Amino Acids

44.18

Weight (kDa)

9.72

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 336, 438, 641
AclWI GGATC 2 cut(s) 498, 1174
AcoI YGGCCR 1 cut(s) 254
AcsI RAATTY 1 cut(s) 850
AcuI CTGAAG 2 cut(s) 9, 1049
AdeI CACNNNGTG 1 cut(s) 426
AfaI GTAC 5 cut(s) 39, 344, 380, 407, 1071
AfiI CCNNNNNNNGG 2 cut(s) 236, 357
AgsI TTSAA 9 cut(s) 14, 46, 93, 161, 215, 403, 523, 815, 994
AjnI CCWGG 2 cut(s) 338, 606
AjuI GAANNNNNNNTTGG 2 cut(s) 918, 950
AleI CACNNNNGTG 1 cut(s) 1050
AloI GAACNNNNNNTCC 2 cut(s) 732, 764
Alw21I GWGCWC 1 cut(s) 1057
Alw26I GTCTC 3 cut(s) 273, 601, 1111
AlwI GGATC 2 cut(s) 498, 1174
AlwNI CAGNNNCTG 1 cut(s) 785
Ama87I CYCGRG 1 cut(s) 507
AoxI GGCC 2 cut(s) 254, 618
ApeKI GCWGC 5 cut(s) 179, 182, 367, 779, 788
ApoI RAATTY 1 cut(s) 850
AseI ATTAAT 1 cut(s) 1115
AspLEI GCGC 1 cut(s) 535
AspS9I GGNCC 2 cut(s) 511, 618
AsuC2I CCSGG 2 cut(s) 508, 509
AsuHPI GGTGA 5 cut(s) 325, 412, 676, 685, 749
AsuII TTCGAA 2 cut(s) 151, 201
AvaI CYCGRG 1 cut(s) 507
AvaII GGWCC 1 cut(s) 511
BaeGI GKGCMC 1 cut(s) 799
BanII GRGCYC 1 cut(s) 242
BarI GAAGNNNNNNTAC 2 cut(s) 398, 430
BbsI GAAGAC 1 cut(s) 637
Bbv12I GWGCWC 1 cut(s) 1057
BbvI GCAGC 5 cut(s) 191, 194, 354, 775, 791
BccI CCATC 4 cut(s) 282, 475, 759, 1144
BceAI ACGGC 3 cut(s) 253, 294, 546
BcgI CGANNNNNNTGC 2 cut(s) 482, 516
BciT130I CCWGG 2 cut(s) 340, 608
BcnI CCSGG 2 cut(s) 508, 509
BcoDI GTCTC 3 cut(s) 273, 601, 1111
BfaI CTAG 3 cut(s) 186, 947, 1073
BfmI CTRYAG 1 cut(s) 1092
BfoI RGCGCY 1 cut(s) 536
BisI GCNGC 5 cut(s) 180, 183, 368, 780, 789
BlpI GCTNAGC 2 cut(s) 452, 536
BlsI GCNGC 5 cut(s) 181, 184, 369, 781, 790
BmcAI AGTACT 1 cut(s) 380
Bme1390I CCNGG 4 cut(s) 340, 508, 509, 608
Bme18I GGWCC 1 cut(s) 511
BmeT110I CYCGRG 1 cut(s) 507
BmgT120I GGNCC 2 cut(s) 511, 618
BmiI GGNNCC 4 cut(s) 486, 512, 619, 879
BmrFI CCNGG 4 cut(s) 340, 508, 509, 608
BpiI GAAGAC 1 cut(s) 637
Bpu1102I GCTNAGC 2 cut(s) 452, 536
Bpu14I TTCGAA 2 cut(s) 151, 201
BpuMI CCSGG 2 cut(s) 508, 509
BsaI GGTCTC 3 cut(s) 273, 601, 1111
BsaJI CCNNGG 1 cut(s) 507
Bsc4I CCNNNNNNNGG 2 cut(s) 236, 357
Bse118I RCCGGY 1 cut(s) 592
Bse1I ACTGG 2 cut(s) 1050, 1147
Bse3DI GCAATG 1 cut(s) 723
BseBI CCWGG 2 cut(s) 340, 608
BseDI CCNNGG 1 cut(s) 507
BseGI GGATG 2 cut(s) 347, 480
BseLI CCNNNNNNNGG 2 cut(s) 236, 357
BseMI GCAATG 1 cut(s) 723
BseMII CTCAG 4 cut(s) 56, 400, 466, 527
BseNI ACTGG 2 cut(s) 1050, 1147
BseSI GKGCMC 1 cut(s) 799
BseXI GCAGC 5 cut(s) 191, 194, 354, 775, 791
Bsh1285I CGRYCG 2 cut(s) 324, 561
BshFI GGCC 2 cut(s) 256, 620
BsiEI CGRYCG 2 cut(s) 324, 561
BsiHKAI GWGCWC 1 cut(s) 1057
BsiHKCI CYCGRG 1 cut(s) 507
BsiSI CCGG 3 cut(s) 257, 508, 593
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 2 cut(s) 236, 357
BsmAI GTCTC 3 cut(s) 273, 601, 1111
BsmFI GGGAC 1 cut(s) 256
BsnI GGCC 2 cut(s) 256, 620
Bso31I GGTCTC 3 cut(s) 273, 601, 1111
BsoBI CYCGRG 1 cut(s) 507
Bsp119I TTCGAA 2 cut(s) 151, 201
Bsp1286I GDGCHC 3 cut(s) 242, 799, 1057
Bsp143I GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
Bsp1720I GCTNAGC 2 cut(s) 452, 536
BspACI CCGC 3 cut(s) 336, 438, 641
BspANI GGCC 2 cut(s) 256, 620
BspCNI CTCAG 4 cut(s) 57, 399, 465, 528
BspLI GGNNCC 4 cut(s) 486, 512, 619, 879
BspPI GGATC 2 cut(s) 498, 1174
BspQI GCTCTTC 1 cut(s) 247
BspT104I TTCGAA 2 cut(s) 151, 201
BspTNI GGTCTC 3 cut(s) 273, 601, 1111
BsrDI GCAATG 1 cut(s) 723
BsrFI RCCGGY 1 cut(s) 592
BsrI ACTGG 2 cut(s) 1050, 1147
BssAI RCCGGY 1 cut(s) 592
BssECI CCNNGG 1 cut(s) 507
BssMI GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
Bst2UI CCWGG 2 cut(s) 340, 608
Bst4CI ACNGT 2 cut(s) 1168, 1190
Bst6I CTCTTC 3 cut(s) 198, 247, 1068
BstAPI GCANNNNNTGC 2 cut(s) 785, 788
BstBI TTCGAA 2 cut(s) 151, 201
BstC8I GCNNGC 1 cut(s) 172
BstDEI CTNAG 4 cut(s) 65, 386, 452, 536
BstF5I GGATG 2 cut(s) 347, 480
BstH2I RGCGCY 1 cut(s) 536
BstHHI GCGC 1 cut(s) 535
BstKTI GATC 6 cut(s) 324, 414, 506, 528, 975, 1182
BstMAI GTCTC 3 cut(s) 273, 601, 1111
BstMBI GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
BstMCI CGRYCG 2 cut(s) 324, 561
BstMWI GCNNNNNNNGC 9 cut(s) 176, 396, 617, 647, 785, 788, 794, 884, 1088
BstNI CCWGG 2 cut(s) 340, 608
BstSCI CCNGG 4 cut(s) 338, 506, 507, 606
BstSFI CTRYAG 1 cut(s) 1092
BstSLI GKGCMC 1 cut(s) 799
BstV1I GCAGC 5 cut(s) 191, 194, 354, 775, 791
BstV2I GAAGAC 1 cut(s) 637
BstXI CCANNNNNNTGG 3 cut(s) 614, 758, 1033
BsuRI GGCC 2 cut(s) 256, 620
BtsCI GGATG 2 cut(s) 347, 480
BtsI GCAGTG 1 cut(s) 636
BtsIMutI CAGTG 4 cut(s) 636, 813, 1057, 1195
Cac8I GCNNGC 1 cut(s) 172
CaiI CAGNNNCTG 1 cut(s) 785
CfoI GCGC 1 cut(s) 535
Cfr10I RCCGGY 1 cut(s) 592
Cfr13I GGNCC 2 cut(s) 511, 618
Cfr9I CCCGGG 1 cut(s) 507
Csp6I GTAC 5 cut(s) 38, 343, 379, 406, 1070
CviAII CATG 5 cut(s) 252, 424, 433, 856, 919
CviQI GTAC 5 cut(s) 38, 343, 379, 406, 1070
DdeI CTNAG 4 cut(s) 65, 386, 452, 536
DpnI GATC 6 cut(s) 323, 413, 505, 527, 974, 1181
DpnII GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
DraIII CACNNNGTG 1 cut(s) 426
EaeI YGGCCR 1 cut(s) 254
Eam1104I CTCTTC 3 cut(s) 198, 247, 1068
EarI CTCTTC 3 cut(s) 198, 247, 1068
Eco24I GRGCYC 1 cut(s) 242
Eco31I GGTCTC 3 cut(s) 273, 601, 1111
Eco47I GGWCC 1 cut(s) 511
Eco57I CTGAAG 2 cut(s) 9, 1049
Eco88I CYCGRG 1 cut(s) 507
EcoRI GAATTC 1 cut(s) 850
EcoRII CCWGG 2 cut(s) 338, 606
EcoT38I GRGCYC 1 cut(s) 242
FaeI CATG 5 cut(s) 255, 427, 436, 859, 922
FalI AAGNNNNNCTT 2 cut(s) 661, 693
FaqI GGGAC 1 cut(s) 256
FatI CATG 5 cut(s) 251, 423, 432, 855, 918
FauNDI CATATG 1 cut(s) 977
Fnu4HI GCNGC 5 cut(s) 180, 183, 368, 780, 789
FokI GGATG 2 cut(s) 334, 487
FriOI GRGCYC 1 cut(s) 242
Fsp4HI GCNGC 5 cut(s) 180, 183, 368, 780, 789
FspBI CTAG 3 cut(s) 186, 947, 1073
GlaI GCGC 1 cut(s) 534
GluI GCNGC 5 cut(s) 180, 183, 368, 780, 789
HaeII RGCGCY 1 cut(s) 536
HaeIII GGCC 2 cut(s) 256, 620
HapII CCGG 3 cut(s) 257, 508, 593
HhaI GCGC 1 cut(s) 535
Hin1II CATG 5 cut(s) 255, 427, 436, 859, 922
Hin6I GCGC 1 cut(s) 533
HinP1I GCGC 1 cut(s) 533
HincII GTYRAC 1 cut(s) 221
HindII GTYRAC 1 cut(s) 221
HindIII AAGCTT 2 cut(s) 675, 745
HinfI GANTC 3 cut(s) 10, 661, 1060
HpaII CCGG 3 cut(s) 257, 508, 593
HphI GGTGA 5 cut(s) 325, 412, 676, 685, 749
Hpy166II GTNNAC 3 cut(s) 221, 318, 740
Hpy188I TCNGA 5 cut(s) 137, 835, 882, 1023, 1059
Hpy188III TCNNGA 5 cut(s) 93, 278, 319, 520, 970
Hpy8I GTNNAC 3 cut(s) 221, 318, 740
HpyAV CCTTC 6 cut(s) 52, 188, 209, 292, 830, 875
HpyCH4III ACNGT 2 cut(s) 1168, 1190
HpyCH4V TGCA 8 cut(s) 56, 104, 170, 493, 728, 791, 908, 956
HpyF10VI GCNNNNNNNGC 9 cut(s) 176, 396, 617, 647, 785, 788, 794, 884, 1088
HpyF3I CTNAG 4 cut(s) 65, 386, 452, 536
Hsp92II CATG 5 cut(s) 255, 427, 436, 859, 922
HspAI GCGC 1 cut(s) 533
Kzo9I GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
LguI GCTCTTC 1 cut(s) 247
LmnI GCTCC 2 cut(s) 883, 1088
Lsp1109I GCAGC 5 cut(s) 191, 194, 354, 775, 791
MaeI CTAG 3 cut(s) 186, 947, 1073
MaeIII GTNAC 4 cut(s) 331, 709, 1036, 1138
MalI GATC 6 cut(s) 323, 413, 505, 527, 974, 1181
MboI GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
MfeI CAATTG 3 cut(s) 14, 46, 465
MhlI GDGCHC 3 cut(s) 242, 799, 1057
MluCI AATT 9 cut(s) 14, 46, 161, 465, 515, 768, 850, 994, 1116
MlyI GAGTC 2 cut(s) 655, 1054
MmeI TCCRAC 1 cut(s) 375
MnlI CCTC 6 cut(s) 42, 199, 297, 428, 707, 872
MseI TTAA 4 cut(s) 603, 767, 801, 1115
MslI CAYNNNNRTG 1 cut(s) 1050
MspI CCGG 3 cut(s) 257, 508, 593
MspR9I CCNGG 4 cut(s) 340, 508, 509, 608
MunI CAATTG 3 cut(s) 14, 46, 465
MvaI CCWGG 2 cut(s) 340, 608
MwoI GCNNNNNNNGC 9 cut(s) 176, 396, 617, 647, 785, 788, 794, 884, 1088
NciI CCSGG 2 cut(s) 508, 509
NdeI CATATG 1 cut(s) 977
NdeII GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
NlaIII CATG 5 cut(s) 255, 427, 436, 859, 922
NlaIV GGNNCC 4 cut(s) 486, 512, 619, 879
NmuCI GTSAC 3 cut(s) 331, 1036, 1138
NspV TTCGAA 2 cut(s) 151, 201
OliI CACNNNNGTG 1 cut(s) 1050
PciSI GCTCTTC 1 cut(s) 247
PfeI GAWTC 1 cut(s) 10
PkrI GCNGC 5 cut(s) 181, 184, 369, 781, 790
Ple19I CGATCG 1 cut(s) 324
PleI GAGTC 2 cut(s) 655, 1054
PpsI GAGTC 2 cut(s) 655, 1054
PshBI ATTAAT 1 cut(s) 1115
Psp6I CCWGG 2 cut(s) 338, 606
PspGI CCWGG 2 cut(s) 338, 606
PspN4I GGNNCC 4 cut(s) 486, 512, 619, 879
PspPI GGNCC 2 cut(s) 511, 618
PstNI CAGNNNCTG 1 cut(s) 785
PvuI CGATCG 1 cut(s) 324
RsaI GTAC 5 cut(s) 39, 344, 380, 407, 1071
RsaNI GTAC 5 cut(s) 38, 343, 379, 406, 1070
RseI CAYNNNNRTG 1 cut(s) 1050
SapI GCTCTTC 1 cut(s) 247
SaqAI TTAA 4 cut(s) 603, 767, 801, 1115
SatI GCNGC 5 cut(s) 180, 183, 368, 780, 789
Sau3AI GATC 6 cut(s) 321, 411, 503, 525, 972, 1179
Sau96I GGNCC 2 cut(s) 511, 618
ScaI AGTACT 1 cut(s) 380
SchI GAGTC 2 cut(s) 655, 1054
ScrFI CCNGG 4 cut(s) 340, 508, 509, 608
SduI GDGCHC 3 cut(s) 242, 799, 1057
SfcI CTRYAG 1 cut(s) 1092
SfuI TTCGAA 2 cut(s) 151, 201
SinI GGWCC 1 cut(s) 511
SmaI CCCGGG 1 cut(s) 509
SmiMI CAYNNNNRTG 1 cut(s) 1050
Sse9I AATT 9 cut(s) 14, 46, 161, 465, 515, 768, 850, 994, 1116
SsiI CCGC 3 cut(s) 336, 438, 641
SspI AATATT 1 cut(s) 1113
SspMI CTAG 3 cut(s) 186, 947, 1073
StyD4I CCNGG 4 cut(s) 338, 506, 507, 606
TaaI ACNGT 2 cut(s) 1168, 1190
TaqI TCGA 4 cut(s) 151, 201, 277, 502
TaqII GACCGA 1 cut(s) 547
TasI AATT 9 cut(s) 14, 46, 161, 465, 515, 768, 850, 994, 1116
TatI WGTACW 1 cut(s) 378
TfiI GAWTC 1 cut(s) 10
Tru1I TTAA 4 cut(s) 603, 767, 801, 1115
Tru9I TTAA 4 cut(s) 603, 767, 801, 1115
TscAI CASTG 4 cut(s) 643, 813, 1057, 1195
TseFI GTSAC 3 cut(s) 331, 1036, 1138
TseI GCWGC 5 cut(s) 179, 182, 367, 779, 788
Tsp45I GTSAC 3 cut(s) 331, 1036, 1138
TspDTI ATGAA 4 cut(s) 207, 311, 491, 872
TspGWI ACGGA 1 cut(s) 1126
TspMI CCCGGG 1 cut(s) 507
TspRI CASTG 4 cut(s) 643, 813, 1057, 1195
VpaK11BI GGWCC 1 cut(s) 511
VspI ATTAAT 1 cut(s) 1115
XapI RAATTY 1 cut(s) 850
XmaI CCCGGG 1 cut(s) 507
XspI CTAG 3 cut(s) 186, 947, 1073
ZrmI AGTACT 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.