Rh5DG477300

Sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000810
Physical Location & Seq
Forward (+)
75418537 .. 75420377
1841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG477300.1

Sequence Viewer

Length: 918 bp
ATGTCGACGAGCCGGGTCTTCACCGTGGGGTTGATAACGGCATGGTACTCATCCAATATAGGAGTTCTGCTATTGAACAAGTTCCTCCTAACCAATTACGGGTTCAAGTACCCGATCTTCCTGACCCTCTGCCACATGCTGGCTTGCTCTTTCTTAAGCTACGTTGCCATTTCATGGCTCAAGGTGGTTCCCATGCAGAGCATCAGGTCAAGGGTTCAGTTCGTCAAGATATCGTCGCTCGGTTTCATCTTCTGTTTGTCGGTCGTCGGCGGGAACATCTCGCTCCGGTATCTGGCGGTGTCGTTCAACCAGGCGGTGGGCGCCACGACACCGTTTTTCACGGCGGTTTTTGCGTACTTGATGACTCTGAAGAAGGAGGGCTGGCTCACGTACCTTACTCTTGTACCTGTCGTCACCGGCGTTATTATTGCCAGCGGGGGAGAGCCAAGTTTTCATCTCTTTGGATTTATAATGTGCATTGCTGCAACAGCAGCACGGGCGCTCAAGTCAGTTCTTCAAGGGATACTACTGTCTTCTGAAGCGGAAAAGCTAAATTCTATGAACCTCCTCATGTACATGGGACCTGTAGCTTGTGTAATTCTTCTGCCTGCGGCACTTTGGATGGAACAAGATGTGGTTGGGATAACCATTGCTCTTGCAAGAGATGATGTGAGCATCATATGGTATCTAGTATTCAATTCTGCCCTTGCATACTTTGTGAATTTGACCAACTTCTTGGTAACCAAACACACAAGTCCCCTGACTCTCCAGGTTTTGGGAAATGCAAAAGGAGCTGTTGCTGTGGTTGTTTCAATTTTGATATTCAGAAATCCAGTATCAGTAACTGGGATGCTGGGTTACGGTCTCACAGTAACAGGAGTAATCCTATACAGTGAAGCCAAGAAAAGGGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

305

Amino Acids

33.22

Weight (kDa)

9.61

Isoelectric Point (pI)

36.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPT PF03151 11 - 298 7.5e-47 Triose-phosphate Transporter family
UAA PF08449 28 - 300 7.8e-11 UAA transporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 470
AccB1I GGYRCC 1 cut(s) 320
AccB7I CCANNNNNTGG 4 cut(s) 139, 174, 316, 775
AccI GTMKAC 1 cut(s) 5
AciI CCGC 7 cut(s) 270, 296, 314, 344, 435, 542, 611
AcsI RAATTY 2 cut(s) 553, 721
AcuI CTGAAG 2 cut(s) 389, 558
AcyI GRCGYC 1 cut(s) 321
AfaI GTAC 6 cut(s) 47, 110, 356, 392, 405, 575
AfiI CCNNNNNNNGG 7 cut(s) 99, 139, 174, 292, 316, 775, 906
AflII CTTAAG 1 cut(s) 154
AgsI TTSAA 6 cut(s) 76, 106, 307, 518, 697, 813
AjnI CCWGG 2 cut(s) 309, 768
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
AluBI AGCT 4 cut(s) 159, 550, 590, 794
AluI AGCT 4 cut(s) 159, 550, 590, 794
Alw26I GTCTC 1 cut(s) 869
AlwNI CAGNNNCTG 1 cut(s) 845
ApeKI GCWGC 2 cut(s) 482, 491
ApoI RAATTY 2 cut(s) 553, 721
Asp700I GAANNNNTTC 1 cut(s) 80
AspLEI GCGC 2 cut(s) 323, 502
AspS9I GGNCC 1 cut(s) 581
AsuC2I CCSGG 1 cut(s) 14
AsuHPI GGTGA 2 cut(s) 13, 406
AvaII GGWCC 1 cut(s) 581
BaeI ACNNNNGTAYC 4 cut(s) 387, 420, 515, 548
BanI GGYRCC 1 cut(s) 320
BarI GAAGNNNNNNTAC 2 cut(s) 101, 133
BbsI GAAGAC 2 cut(s) 10, 525
BbvI GCAGC 2 cut(s) 469, 503
BccI CCATC 1 cut(s) 616
BceAI ACGGC 2 cut(s) 54, 357
BciT130I CCWGG 2 cut(s) 311, 770
BciVI GTATCC 1 cut(s) 516
BcnI CCSGG 1 cut(s) 14
BcoDI GTCTC 1 cut(s) 869
BfaI CTAG 1 cut(s) 689
BfmI CTRYAG 1 cut(s) 585
BfoI RGCGCY 2 cut(s) 324, 503
BfrI CTTAAG 1 cut(s) 154
BfuI GTATCC 1 cut(s) 516
BisI GCNGC 3 cut(s) 483, 492, 612
BlsI GCNGC 3 cut(s) 484, 493, 613
Bme1390I CCNGG 3 cut(s) 14, 311, 770
Bme18I GGWCC 1 cut(s) 581
BmgT120I GGNCC 1 cut(s) 581
BmiI GGNNCC 3 cut(s) 189, 322, 582
BmrFI CCNGG 3 cut(s) 14, 311, 770
BmrI ACTGGG 1 cut(s) 855
BmsI GCATC 3 cut(s) 210, 684, 840
BmuI ACTGGG 1 cut(s) 855
BpiI GAAGAC 2 cut(s) 10, 525
BpmI CTGGAG 1 cut(s) 752
BpuEI CTTGAG 2 cut(s) 164, 488
BpuMI CCSGG 1 cut(s) 14
BsaAI YACGTR 1 cut(s) 390
BsaHI GRCGYC 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 869
BsaJI CCNNGG 1 cut(s) 24
BsaWI WCCGGW 1 cut(s) 285
Bsc4I CCNNNNNNNGG 7 cut(s) 99, 139, 174, 292, 316, 775, 906
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 2 cut(s) 833, 850
Bse3DI GCAATG 2 cut(s) 477, 648
BseBI CCWGG 2 cut(s) 311, 770
BseDI CCNNGG 1 cut(s) 24
BseGI GGATG 3 cut(s) 50, 627, 855
BseLI CCNNNNNNNGG 7 cut(s) 99, 139, 174, 292, 316, 775, 906
BseMI GCAATG 2 cut(s) 477, 648
BseNI ACTGG 2 cut(s) 833, 850
BseRI GAGGAG 1 cut(s) 557
BseXI GCAGC 2 cut(s) 469, 503
BseYI CCCAGC 1 cut(s) 853
Bsh1285I CGRYCG 1 cut(s) 264
BshNI GGYRCC 1 cut(s) 320
BsiEI CGRYCG 1 cut(s) 264
BsiSI CCGG 3 cut(s) 13, 286, 417
BslFI GGGAC 2 cut(s) 594, 741
BslI CCNNNNNNNGG 7 cut(s) 99, 139, 174, 292, 316, 775, 906
BsmAI GTCTC 1 cut(s) 869
BsmFI GGGAC 2 cut(s) 594, 741
Bso31I GGTCTC 1 cut(s) 869
Bsp1407I TGTACA 1 cut(s) 573
Bsp143I GATC 1 cut(s) 114
BspACI CCGC 7 cut(s) 270, 296, 314, 344, 435, 542, 611
BspLI GGNNCC 3 cut(s) 189, 322, 582
BspT107I GGYRCC 1 cut(s) 320
BspTI CTTAAG 1 cut(s) 154
BspTNI GGTCTC 1 cut(s) 869
BsrDI GCAATG 2 cut(s) 477, 648
BsrFI RCCGGY 1 cut(s) 416
BsrGI TGTACA 1 cut(s) 573
BsrI ACTGG 2 cut(s) 833, 850
BssAI RCCGGY 1 cut(s) 416
BssECI CCNNGG 1 cut(s) 24
BssMI GATC 1 cut(s) 114
BssNI GRCGYC 1 cut(s) 321
Bst2UI CCWGG 2 cut(s) 311, 770
Bst4CI ACNGT 6 cut(s) 25, 333, 531, 863, 871, 893
BstACI GRCGYC 1 cut(s) 321
BstAFI CTTAAG 1 cut(s) 154
BstAUI TGTACA 1 cut(s) 573
BstBAI YACGTR 1 cut(s) 390
BstC8I GCNNGC 5 cut(s) 141, 145, 383, 433, 609
BstDSI CCRYGG 1 cut(s) 24
BstEII GGTNACC 1 cut(s) 739
BstF5I GGATG 3 cut(s) 50, 627, 855
BstH2I RGCGCY 2 cut(s) 324, 503
BstHHI GCGC 2 cut(s) 323, 502
BstKTI GATC 1 cut(s) 117
BstMAI GTCTC 1 cut(s) 869
BstMBI GATC 1 cut(s) 114
BstMCI CGRYCG 1 cut(s) 264
BstMWI GCNNNNNNNGC 6 cut(s) 320, 350, 488, 491, 497, 791
BstNI CCWGG 2 cut(s) 311, 770
BstNSI RCATGY 1 cut(s) 139
BstPI GGTNACC 1 cut(s) 739
BstSCI CCNGG 3 cut(s) 12, 309, 768
BstSFI CTRYAG 1 cut(s) 585
BstV1I GCAGC 2 cut(s) 469, 503
BstV2I GAAGAC 2 cut(s) 10, 525
BstXI CCANNNNNNTGG 1 cut(s) 736
BsuI GTATCC 1 cut(s) 516
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 3 cut(s) 50, 627, 855
BtsIMutI CAGTG 1 cut(s) 898
Cac8I GCNNGC 5 cut(s) 141, 145, 383, 433, 609
CaiI CAGNNNCTG 1 cut(s) 845
CfoI GCGC 2 cut(s) 323, 502
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 1 cut(s) 581
Csp6I GTAC 6 cut(s) 46, 109, 355, 391, 404, 574
CviAII CATG 6 cut(s) 42, 136, 174, 193, 571, 577
CviQI GTAC 6 cut(s) 46, 109, 355, 391, 404, 574
DinI GGCGCC 1 cut(s) 322
DpnI GATC 1 cut(s) 116
DpnII GATC 1 cut(s) 114
Eco31I GGTCTC 1 cut(s) 869
Eco32I GATATC 1 cut(s) 231
Eco47I GGWCC 1 cut(s) 581
Eco57I CTGAAG 2 cut(s) 389, 558
Eco91I GGTNACC 1 cut(s) 739
EcoO109I RGGNCCY 1 cut(s) 581
EcoO65I GGTNACC 1 cut(s) 739
EcoRII CCWGG 2 cut(s) 309, 768
EcoRV GATATC 1 cut(s) 231
EgeI GGCGCC 1 cut(s) 322
EheI GGCGCC 1 cut(s) 322
FaeI CATG 6 cut(s) 45, 139, 177, 196, 574, 580
FaqI GGGAC 2 cut(s) 594, 741
FatI CATG 6 cut(s) 41, 135, 173, 192, 570, 576
FauI CCCGC 2 cut(s) 263, 428
FauNDI CATATG 1 cut(s) 680
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 3 cut(s) 483, 492, 612
FokI GGATG 3 cut(s) 37, 634, 862
Fsp4HI GCNGC 3 cut(s) 483, 492, 612
FspBI CTAG 1 cut(s) 689
GlaI GCGC 2 cut(s) 322, 501
GluI GCNGC 3 cut(s) 483, 492, 612
GsaI CCCAGC 1 cut(s) 857
GsuI CTGGAG 1 cut(s) 752
HaeII RGCGCY 2 cut(s) 324, 503
HapII CCGG 3 cut(s) 13, 286, 417
HhaI GCGC 2 cut(s) 323, 502
Hin1I GRCGYC 1 cut(s) 321
Hin1II CATG 6 cut(s) 45, 139, 177, 196, 574, 580
Hin6I GCGC 2 cut(s) 321, 500
HinP1I GCGC 2 cut(s) 321, 500
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 2 cut(s) 364, 763
HpaII CCGG 3 cut(s) 13, 286, 417
HphI GGTGA 2 cut(s) 13, 406
Hpy166II GTNNAC 1 cut(s) 6
Hpy188I TCNGA 3 cut(s) 369, 538, 827
Hpy188III TCNNGA 2 cut(s) 121, 226
Hpy8I GTNNAC 1 cut(s) 6
Hpy99I CGWCG 3 cut(s) 10, 238, 269
HpyAV CCTTC 1 cut(s) 367
HpyCH4III ACNGT 6 cut(s) 25, 333, 531, 863, 871, 893
HpyCH4IV ACGT 2 cut(s) 162, 389
HpyCH4V TGCA 6 cut(s) 196, 477, 485, 659, 710, 785
HpyF10VI GCNNNNNNNGC 6 cut(s) 320, 350, 488, 491, 497, 791
HpySE526I ACGT 2 cut(s) 162, 389
Hsp92I GRCGYC 1 cut(s) 321
Hsp92II CATG 6 cut(s) 45, 139, 177, 196, 574, 580
HspAI GCGC 2 cut(s) 321, 500
KasI GGCGCC 1 cut(s) 320
Kzo9I GATC 1 cut(s) 114
LmnI GCTCC 2 cut(s) 288, 791
Lsp1109I GCAGC 2 cut(s) 469, 503
LweI GCATC 3 cut(s) 210, 684, 840
MaeI CTAG 1 cut(s) 689
MaeII ACGT 2 cut(s) 162, 389
MaeIII GTNAC 5 cut(s) 412, 739, 841, 857, 871
MalI GATC 1 cut(s) 116
MboI GATC 1 cut(s) 114
MboII GAAGA 7 cut(s) 10, 109, 241, 382, 506, 525, 593
MluCI AATT 6 cut(s) 94, 553, 597, 697, 721, 813
Mly113I GGCGCC 1 cut(s) 321
MlyI GAGTC 2 cut(s) 358, 757
MnlI CCTC 5 cut(s) 95, 137, 370, 575, 578
MroXI GAANNNNTTC 1 cut(s) 80
MseI TTAA 1 cut(s) 155
MslI CAYNNNNRTG 1 cut(s) 575
MspA1I CMGCKG 1 cut(s) 435
MspCI CTTAAG 1 cut(s) 154
MspI CCGG 3 cut(s) 13, 286, 417
MspR9I CCNGG 3 cut(s) 14, 311, 770
MvaI CCWGG 2 cut(s) 311, 770
MwoI GCNNNNNNNGC 6 cut(s) 320, 350, 488, 491, 497, 791
NarI GGCGCC 1 cut(s) 321
NciI CCSGG 1 cut(s) 14
NdeI CATATG 1 cut(s) 680
NdeII GATC 1 cut(s) 114
NlaIII CATG 6 cut(s) 45, 139, 177, 196, 574, 580
NlaIV GGNNCC 3 cut(s) 189, 322, 582
NmuCI GTSAC 1 cut(s) 412
NspI RCATGY 1 cut(s) 139
PcsI WCGNNNNNNNCGW 1 cut(s) 417
PdmI GAANNNNTTC 1 cut(s) 80
PflMI CCANNNNNTGG 4 cut(s) 139, 174, 316, 775
PkrI GCNGC 3 cut(s) 484, 493, 613
PleI GAGTC 2 cut(s) 358, 757
PluTI GGCGCC 1 cut(s) 324
PpsI GAGTC 2 cut(s) 358, 757
Ppu21I YACGTR 1 cut(s) 390
PpuMI RGGWCCY 1 cut(s) 581
PsiI TTATAA 1 cut(s) 470
Psp5II RGGWCCY 1 cut(s) 581
Psp6I CCWGG 2 cut(s) 309, 768
PspEI GGTNACC 1 cut(s) 739
PspFI CCCAGC 1 cut(s) 853
PspGI CCWGG 2 cut(s) 309, 768
PspN4I GGNNCC 3 cut(s) 189, 322, 582
PspPI GGNCC 1 cut(s) 581
PspPPI RGGWCCY 1 cut(s) 581
PstNI CAGNNNCTG 1 cut(s) 845
RsaI GTAC 6 cut(s) 47, 110, 356, 392, 405, 575
RsaNI GTAC 6 cut(s) 46, 109, 355, 391, 404, 574
RseI CAYNNNNRTG 1 cut(s) 575
SalI GTCGAC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 155
SatI GCNGC 3 cut(s) 483, 492, 612
Sau3AI GATC 1 cut(s) 114
Sau96I GGNCC 1 cut(s) 581
SchI GAGTC 2 cut(s) 358, 757
ScrFI CCNGG 3 cut(s) 14, 311, 770
SfaNI GCATC 3 cut(s) 210, 684, 840
SfcI CTRYAG 1 cut(s) 585
SfoI GGCGCC 1 cut(s) 322
SgrAI CRCCGGYG 1 cut(s) 416
SinI GGWCC 1 cut(s) 581
SmiMI CAYNNNNRTG 1 cut(s) 575
SmlI CTYRAG 3 cut(s) 154, 179, 503
SmoI CTYRAG 3 cut(s) 154, 179, 503
Sse9I AATT 6 cut(s) 94, 553, 597, 697, 721, 813
SsiI CCGC 7 cut(s) 270, 296, 314, 344, 435, 542, 611
SspDI GGCGCC 1 cut(s) 320
SspMI CTAG 1 cut(s) 689
StyD4I CCNGG 3 cut(s) 12, 309, 768
TaaI ACNGT 6 cut(s) 25, 333, 531, 863, 871, 893
TaiI ACGT 2 cut(s) 165, 392
TaqI TCGA 1 cut(s) 5
TaqII GACCGA 1 cut(s) 250
TasI AATT 6 cut(s) 94, 553, 597, 697, 721, 813
TatI WGTACW 1 cut(s) 573
TauI GCSGC 1 cut(s) 614
Tru1I TTAA 1 cut(s) 155
Tru9I TTAA 1 cut(s) 155
TscAI CASTG 1 cut(s) 898
TseFI GTSAC 1 cut(s) 412
TseI GCWGC 2 cut(s) 482, 491
Tsp45I GTSAC 1 cut(s) 412
TspDTI ATGAA 4 cut(s) 162, 235, 443, 575
TspRI CASTG 1 cut(s) 898
Van91I CCANNNNNTGG 4 cut(s) 139, 174, 316, 775
Vha464I CTTAAG 1 cut(s) 154
VpaK11BI GGWCC 1 cut(s) 581
XapI RAATTY 2 cut(s) 553, 721
XceI RCATGY 1 cut(s) 139
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 80
XspI CTAG 1 cut(s) 689
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.