Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0000810

Physical Location & Seq

Genomic Coordinates Reverse (-)

32078320 .. 32081571

Gene Structure 3252 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0183800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGTTAGGCCTAGCATACAATGTGGCTACCAAGGTAGCCGCAGCAGTCCACGCTCCTCACAAAACCATTGATGAGGAGTTTAGCCTGTTTGCCATGTCTGACAAGCAGATCTTGCAGGAGATTTACACGACTCATGTCCATGCTGATGAGACCTTGGATGATGATTCTCTCTTCATCATTGTTGAGAATATCATCAAGCATGCAACCCAAAATGTTGATGAAATAGTGCAGGGTATCCAAGTGCATGTGGACAACATAGAGGAGAAAAACCCCAAAGCCGGGTTTAGCGTACCATTGTGCACTCTAAAGGGAATCTCCTGCGAGATGCAATGCAAGCCTCCTGGTGACGAAATCGCCCACAACACAACAGTGGCAATACTCAACAAGCTCTCAAAGTATTCATGGGAAGCAAAGGCATCACTGACCCTAGCTGCTTTTGCTATGGAATATGGTGAATTCTGGCTCCTTGCGCAGCTTCGCGAATCAGACCACCTTGCCAAATCAATTGCAATCCTCAAACGAGTCCCTGTTCTTCTCAAGCCAACGGAGCTGCAAAAGCGCAGGCAATCAATTCTTCAGCTTAACAATCTGATCAAGGACACACTACAATATTCCCGTTATCTCCCAAAAGAATTCCCCGGTTTGTCGATAGCATCGGAACATATTCCGGTTGATGTCTATTGGGCTATCATCACTGTTGTTGCTTGTGCCACTAAGATCACTATACTAACTAGTGATGAGGACAAGGAGTTTGATCTAGCCCCCTATTCTCAAAAAATTCACTATGTCCTTAACAAGCTACCGATTCAGCTGAGAGGTTGCAAAACATATATTGAGGAGGAAGAGACTTACATAAGGATCAAGAAATTGTTCCAAACGCCTACTGAAATTATGGAGGTTTTCAAGGGATTAATATTTACAAAGGATAATGTCCAGCCACTCGTCGATGGTTCAACTAAGCAAACGGTTAACATCAACATCCTAAGCAGGAAGAATGTGCTATTGTTCATTTCCAGTCTAGACATTACGGATGACGACATTTCGATTCTAAAACCGATCCACGAGTTCACAAAGAAAGACAATCAGTATAACATTGTCTGGATACCAATTGTGGAGCAATGGACTGATGACCTGAGAAAGAAGTTCGATATCCTGAAGAACAAGATGCCGTGGTTTACGGTGCAGTACCCTGGACCTATAGCAGGCATCAAGTACATCAAGAAGGACTGGAACTTCAAGGGTAGGCCTACGATGGTGGTGATGAACCCACATGGAAAGGTCGAACACCCTAACGCTGTCCACATGGTTCGGGTATGGGGAGTAAAGGCCTTCCCTTTCACAGAGACAAGAGAAGCAGAACTGTCACATTCTGATGGAGAACAATGGGTTTCCTCCGTTGTTAACGGAATCCACCCATCTCTGCCCACTTGGATCAAAGAAAATAAGTACATCTTCTTCTATGGCGGTAAAGACAACGTATGGATTCAGAATTTTAAAAATAGAGCAACTGCCCTTGCAAAAGATCCAATCTTCAAGGAAGCAAAGATAGAATTGGTTTGCGTTGGAAAAGACAGCAAAGGAGAAGATGACCATGGCGTTCTAGGCCGCTTCTGGACCGGTGTAGAAAGCCTGTTCTTAACCACAGGCCAATGGCAGGTCGACTCGGTCAGTGAAGAAATCCAGAAGCTTCTCTCTTACAAAAACGAAAGTGGATGGGCAGTGCTTTGCAAAGGGTCGACTGTGTTGGTCACGGCTCATGGTGTCTCGGTGTTGAAGGTGGTAGAGGACTTTGAGAAATGGAAGGACCCTGTCAAGGAGAACGGGTTTGAGTTTTGTTTCACAACCTACTATGGGACGATTATTCAAGGTAGCCGTCAACCTTGCTGCCGTGTGGACATTCCGGGGTCTAACGGAAAGGTTCCAGATTCGATGAAGTGCCCTGATTGCCACCGTAGTATGGAGACTATTATCAGTTACAAGTGCTGCCACACTGACGGTCCTATTGCACATCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009987 GO:0010154 GO:0010191 GO:0010214 GO:0012505 GO:0015780 GO:0015931 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048316 GO:0048359 GO:0048608 GO:0048731 GO:0048856 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071705 GO:1901264

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPT

Protein Analysis

671

Amino Acids

76.22

Weight (kDa)

6.36

Isoelectric Point (pI)

35.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SEO_N	PF14576	33 - 294	3.8e-73	Sieve element occlusion N-terminus
SEO_C	PF14577	464 - 529	1.2e-11	Sieve element occlusion C-terminus
SEO_C	PF14577	537 - 663	2.5e-30	Sieve element occlusion C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000810)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11320 AT5G05820
fragaria_vesca	FvH4_3g37700 FvH4_6g12230 FvH4_6g12230 FvH4_7g23830 FvH4_7g23830 FvH4_7g23830 FvH4_7g23830 FvH4_7g23830
malus_domestica	MD01G1145600.v1.1 MD03G1078400.v1.1 MD04G1144900.v1.1 MD07G1212700.v1.1 MD12G1158900.v1.1
prunus_persica	Prupe.2G244900_v2.0.a1 Prupe.2G244900_v2.0.a1 Prupe.2G244900_v2.0.a1 Prupe.6G063400_v2.0.a1 Prupe.6G269300_v2.0.a1 Prupe.6G269300_v2.0.a1
pyrus_communis	pycom01g16510 pycom03g06280 pycom07g19540 pycom12g15080
rosa_chinensis	RchiOBHm_Chr1g0369201 RchiOBHm_Chr3g0464031 RchiOBHm_Chr5g0067971 RchiOBHm_Chr7g0183791
rosa_laevigata	RLG00000024727 RLG00000027147 RLG00000035948
rosa_multiflora	Rmu_co8032292.1_g000001 Rmu_sc0000435.1_g000038 Rmu_sc0001203.1_g000001 Rmu_sc0004616.1_g000004 Rmu_sc0005807.1_g000004 Rmu_sc0019331.1_g000001 Rmu_sc0028685.1_g000001
rosa_roxburghii	Rroxscaffold_1G00012630 Rroxscaffold_1G00013340 Rroxscaffold_4G00287870 Rroxscaffold_4G00291440 Rroxscaffold_5G00365160 Rroxscaffold_6G00416050
rosa_rugosa	Rorug01G0348800 Rorug01G0348800 Rorug01G0348800 Rorug01G0348900 Rorug03G0070200 Rorug04G0183800 Rorug05G0386900
rosa_samantha	Rh1AG355800 Rh1BG319400 Rh1CG333400 Rh1DG350100 Rh3BG131300 Rh3CG133600 Rh3DG132600 Rh5AG445800 Rh5AG536100 Rh5BG463300 Rh5CG485200 Rh5DG477300 Rh7CG459800
rosa_wichuraiana	Rw1G031400 Rw3G010730 Rw5G041630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	471
Acc36I	ACCTGC	1 cut(s)	1645
AccI	GTMKAC	2 cut(s)	1659, 1736
AccII	CGCG	1 cut(s)	480
AciI	CCGC	3 cut(s)	39, 1464, 1606
AclWI	GGATC	4 cut(s)	866, 1051, 1439, 1517
AcsI	RAATTY	4 cut(s)	455, 632, 777, 1489
AcuI	CTGAAG	2 cut(s)	560, 1175
AfaI	GTAC	4 cut(s)	291, 1187, 1214, 1448
AfiI	CCNNNNNNNGG	7 cut(s)	278, 279, 1202, 1654, 1813, 1851, 1957
AgeI	ACCGGT	1 cut(s)	1616
AgsI	TTSAA	6 cut(s)	904, 954, 1237, 1534, 1774, 1865
AhlI	ACTAGT	1 cut(s)	731
AjnI	CCWGG	2 cut(s)	340, 1189
AleI	CACNNNNGTG	1 cut(s)	368
AluBI	AGCT	8 cut(s)	388, 431, 475, 550, 580, 799, 811, 1687
AluI	AGCT	8 cut(s)	388, 431, 475, 550, 580, 799, 811, 1687
Alw21I	GWGCWC	1 cut(s)	302
Alw26I	GTCTC	5 cut(s)	143, 839, 1337, 1768, 1955
Alw44I	GTGCAC	1 cut(s)	298
AlwI	GGATC	4 cut(s)	866, 1051, 1439, 1517
AoxI	GGCC	5 cut(s)	7, 1244, 1326, 1603, 1645
ApaLI	GTGCAC	1 cut(s)	298
ApeKI	GCWGC	6 cut(s)	41, 431, 472, 550, 1884, 1983
ApoI	RAATTY	4 cut(s)	455, 632, 777, 1489
ArsI	GACNNNNNNTTYG	2 cut(s)	734, 766
AseI	ATTAAT	1 cut(s)	911
AsiGI	ACCGGT	1 cut(s)	1616
Asp700I	GAANNNNTTC	2 cut(s)	663, 869
AspLEI	GCGC	2 cut(s)	472, 561
AspS9I	GGNCC	4 cut(s)	1193, 1614, 1804, 1997
AsuC2I	CCSGG	3 cut(s)	280, 639, 1902
AsuHPI	GGTGA	3 cut(s)	356, 464, 1270
AvaII	GGWCC	4 cut(s)	1193, 1614, 1804, 1997
BaeGI	GKGCMC	2 cut(s)	302, 1940
BarI	GAAGNNNNNNTAC	2 cut(s)	1439, 1471
BauI	CACGAG	1 cut(s)	1061
Bbv12I	GWGCWC	1 cut(s)	302
BbvI	GCAGC	6 cut(s)	53, 418, 484, 537, 1871, 1970
BccI	CCATC	5 cut(s)	941, 1246, 1367, 1423, 1707
BceAI	ACGGC	4 cut(s)	1153, 1767, 1857, 1872
BciT130I	CCWGG	2 cut(s)	342, 1191
BciVI	GTATCC	2 cut(s)	245, 1095
BclI	TGATCA	1 cut(s)	591
BcnI	CCSGG	3 cut(s)	280, 639, 1902
BcoDI	GTCTC	5 cut(s)	143, 839, 1337, 1768, 1955
BcuI	ACTAGT	1 cut(s)	731
BfaI	CTAG	6 cut(s)	11, 428, 732, 758, 1019, 1601
BfmI	CTRYAG	1 cut(s)	1197
BfuAI	ACCTGC	1 cut(s)	1645
BfuI	GTATCC	2 cut(s)	245, 1095
BglII	AGATCT	1 cut(s)	108
BisI	GCNGC	8 cut(s)	39, 42, 432, 473, 551, 1606, 1885, 1984
BlsI	GCNGC	8 cut(s)	40, 43, 433, 474, 552, 1607, 1886, 1985
Bme1390I	CCNGG	5 cut(s)	280, 342, 639, 1191, 1902
Bme18I	GGWCC	4 cut(s)	1193, 1614, 1804, 1997
BmgT120I	GGNCC	4 cut(s)	1193, 1614, 1804, 1997
BmiI	GGNNCC	3 cut(s)	464, 1806, 1920
BmrFI	CCNGG	5 cut(s)	280, 342, 639, 1191, 1902
BmsI	GCATC	5 cut(s)	315, 425, 662, 1155, 1215
BoxI	GACNNNNGTC	1 cut(s)	134
Bpu10I	CCTNAGC	1 cut(s)	983
BpuEI	CTTGAG	1 cut(s)	521
BpuMI	CCSGG	3 cut(s)	280, 639, 1902
BsaI	GGTCTC	1 cut(s)	143
BsaJI	CCNNGG	7 cut(s)	30, 153, 637, 1169, 1189, 1591, 1901
BsaWI	WCCGGW	2 cut(s)	667, 1616
BsaXI	ACNNNNNCTCC	2 cut(s)	1808, 1838
Bsc4I	CCNNNNNNNGG	7 cut(s)	278, 279, 1202, 1654, 1813, 1851, 1957
Bse118I	RCCGGY	1 cut(s)	1616
Bse1I	ACTGG	2 cut(s)	1014, 1232
Bse3DI	GCAATG	2 cut(s)	335, 1124
BseBI	CCWGG	2 cut(s)	342, 1191
BseDI	CCNNGG	7 cut(s)	30, 153, 637, 1169, 1189, 1591, 1901
BseGI	GGATG	4 cut(s)	163, 978, 1036, 1718
BseLI	CCNNNNNNNGG	7 cut(s)	278, 279, 1202, 1654, 1813, 1851, 1957
BseMI	GCAATG	2 cut(s)	335, 1124
BseMII	CTCAG	2 cut(s)	803, 1124
BseNI	ACTGG	2 cut(s)	1014, 1232
BseRI	GAGGAG	4 cut(s)	45, 89, 275, 851
BseSI	GKGCMC	2 cut(s)	302, 1940
BseXI	GCAGC	6 cut(s)	53, 418, 484, 537, 1871, 1970
BsgI	GTGCAG	2 cut(s)	248, 1202
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	5 cut(s)	9, 1246, 1328, 1605, 1647
BshTI	ACCGGT	1 cut(s)	1616
BsiHKAI	GWGCWC	1 cut(s)	302
BsiSI	CCGG	5 cut(s)	279, 639, 668, 1617, 1901
BslFI	GGGAC	2 cut(s)	509, 1867
BslI	CCNNNNNNNGG	7 cut(s)	278, 279, 1202, 1654, 1813, 1851, 1957
BsmAI	GTCTC	5 cut(s)	143, 839, 1337, 1768, 1955
BsmFI	GGGAC	2 cut(s)	509, 1867
BsnI	GGCC	5 cut(s)	9, 1246, 1328, 1605, 1647
Bso31I	GGTCTC	1 cut(s)	143
Bsp1286I	GDGCHC	2 cut(s)	302, 1940
Bsp143I	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
Bsp19I	CCATGG	1 cut(s)	1591
Bsp68I	TCGCGA	1 cut(s)	480
BspACI	CCGC	3 cut(s)	39, 1464, 1606
BspANI	GGCC	5 cut(s)	9, 1246, 1328, 1605, 1647
BspCNI	CTCAG	2 cut(s)	804, 1125
BspFNI	CGCG	1 cut(s)	480
BspLI	GGNNCC	3 cut(s)	464, 1806, 1920
BspMI	ACCTGC	1 cut(s)	1645
BspPI	GGATC	4 cut(s)	866, 1051, 1439, 1517
BspTNI	GGTCTC	1 cut(s)	143
BsrDI	GCAATG	2 cut(s)	335, 1124
BsrFI	RCCGGY	1 cut(s)	1616
BsrI	ACTGG	2 cut(s)	1014, 1232
BssAI	RCCGGY	1 cut(s)	1616
BssECI	CCNNGG	7 cut(s)	30, 153, 637, 1169, 1189, 1591, 1901
BssMI	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
BssSI	CACGAG	1 cut(s)	1061
BssT1I	CCWWGG	3 cut(s)	30, 153, 1591
Bst2BI	CACGAG	1 cut(s)	1061
Bst2UI	CCWGG	2 cut(s)	342, 1191
Bst4CI	ACNGT	8 cut(s)	370, 697, 967, 1180, 1362, 1741, 1952, 1997
Bst6I	CTCTTC	2 cut(s)	176, 837
BstAPI	GCANNNNNTGC	1 cut(s)	112
BstC8I	GCNNGC	4 cut(s)	201, 335, 563, 1204
BstDEI	CTNAG	5 cut(s)	714, 812, 957, 983, 1133
BstDSI	CCRYGG	2 cut(s)	1169, 1591
BstENI	CCTNNNNNAGG	1 cut(s)	1200
BstF5I	GGATG	4 cut(s)	163, 978, 1036, 1718
BstFNI	CGCG	1 cut(s)	480
BstHHI	GCGC	2 cut(s)	472, 561
BstKTI	GATC	8 cut(s)	111, 594, 720, 757, 861, 1059, 1434, 1525
BstMAI	GTCTC	5 cut(s)	143, 839, 1337, 1768, 1955
BstMBI	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
BstMWI	GCNNNNNNNGC	9 cut(s)	50, 112, 334, 437, 469, 547, 556, 1602, 1944
BstNI	CCWGG	2 cut(s)	342, 1191
BstNSI	RCATGY	2 cut(s)	203, 248
BstPAI	GACNNNNGTC	1 cut(s)	134
BstSCI	CCNGG	5 cut(s)	278, 340, 637, 1189, 1900
BstSFI	CTRYAG	1 cut(s)	1197
BstSLI	GKGCMC	2 cut(s)	302, 1940
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	6 cut(s)	53, 418, 484, 537, 1871, 1970
BstX2I	RGATCY	2 cut(s)	108, 1522
BstYI	RGATCY	2 cut(s)	108, 1522
BsuI	GTATCC	2 cut(s)	245, 1095
BsuRI	GGCC	5 cut(s)	9, 1246, 1328, 1605, 1647
BtgI	CCRYGG	2 cut(s)	1169, 1591
BtsCI	GGATG	4 cut(s)	163, 978, 1036, 1718
BtsI	GCAGTG	1 cut(s)	1725
BtsIMutI	CAGTG	6 cut(s)	375, 419, 693, 1675, 1725, 1989
BtuMI	TCGCGA	1 cut(s)	480
BveI	ACCTGC	1 cut(s)	1645
Cac8I	GCNNGC	4 cut(s)	201, 335, 563, 1204
CfoI	GCGC	2 cut(s)	472, 561
Cfr10I	RCCGGY	1 cut(s)	1616
Cfr13I	GGNCC	4 cut(s)	1193, 1614, 1804, 1997
Csp6I	GTAC	4 cut(s)	290, 1186, 1213, 1447
CspAI	ACCGGT	1 cut(s)	1616
CviQI	GTAC	4 cut(s)	290, 1186, 1213, 1447
DdeI	CTNAG	5 cut(s)	714, 812, 957, 983, 1133
DpnI	GATC	8 cut(s)	110, 593, 719, 756, 860, 1058, 1433, 1524
DpnII	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
DraI	TTTAAA	1 cut(s)	1495
Eam1104I	CTCTTC	2 cut(s)	176, 837
EarI	CTCTTC	2 cut(s)	176, 837
Eco130I	CCWWGG	3 cut(s)	30, 153, 1591
Eco147I	AGGCCT	3 cut(s)	9, 1246, 1328
Eco31I	GGTCTC	1 cut(s)	143
Eco32I	GATATC	1 cut(s)	1150
Eco47I	GGWCC	4 cut(s)	1193, 1614, 1804, 1997
Eco57I	CTGAAG	2 cut(s)	560, 1175
EcoNI	CCTNNNNNAGG	1 cut(s)	1200
EcoO109I	RGGNCCY	1 cut(s)	1804
EcoRI	GAATTC	2 cut(s)	455, 632
EcoRII	CCWGG	2 cut(s)	340, 1189
EcoRV	GATATC	1 cut(s)	1150
EcoT14I	CCWWGG	3 cut(s)	30, 153, 1591
ErhI	CCWWGG	3 cut(s)	30, 153, 1591
FalI	AAGNNNNNCTT	4 cut(s)	95, 127, 1436, 1468
FaqI	GGGAC	2 cut(s)	509, 1867
FbaI	TGATCA	1 cut(s)	591
FblI	GTMKAC	2 cut(s)	1659, 1736
Fnu4HI	GCNGC	8 cut(s)	39, 42, 432, 473, 551, 1606, 1885, 1984
FokI	GGATG	4 cut(s)	170, 965, 1043, 1725
Fsp4HI	GCNGC	8 cut(s)	39, 42, 432, 473, 551, 1606, 1885, 1984
FspBI	CTAG	6 cut(s)	11, 428, 732, 758, 1019, 1601
FspI	TGCGCA	1 cut(s)	471
GlaI	GCGC	2 cut(s)	471, 560
GluI	GCNGC	8 cut(s)	39, 42, 432, 473, 551, 1606, 1885, 1984
HaeIII	GGCC	5 cut(s)	9, 1246, 1328, 1605, 1647
HapII	CCGG	5 cut(s)	279, 639, 668, 1617, 1901
HhaI	GCGC	2 cut(s)	472, 561
Hin6I	GCGC	2 cut(s)	470, 559
HinP1I	GCGC	2 cut(s)	470, 559
HincII	GTYRAC	5 cut(s)	970, 1402, 1660, 1737, 1877
HindII	GTYRAC	5 cut(s)	970, 1402, 1660, 1737, 1877
HindIII	AAGCTT	1 cut(s)	1685
HpaI	GTTAAC	2 cut(s)	970, 1402
HpaII	CCGG	5 cut(s)	279, 639, 668, 1617, 1901
HphI	GGTGA	3 cut(s)	356, 464, 1270
Hpy188I	TCNGA	6 cut(s)	100, 487, 591, 658, 1372, 1488
Hpy188III	TCNNGA	9 cut(s)	479, 862, 1019, 1099, 1153, 1219, 1612, 1681, 1922
Hpy99I	CGWCG	1 cut(s)	947
HpyAV	CCTTC	4 cut(s)	1216, 1339, 1768, 1795
HpyCH4III	ACNGT	8 cut(s)	370, 697, 967, 1180, 1362, 1741, 1952, 1997
HpyCH4IV	ACGT	1 cut(s)	1476
HpyF10VI	GCNNNNNNNGC	9 cut(s)	50, 112, 334, 437, 469, 547, 556, 1602, 1944
HpyF3I	CTNAG	5 cut(s)	714, 812, 957, 983, 1133
HpySE526I	ACGT	1 cut(s)	1476
HspAI	GCGC	2 cut(s)	470, 559
Ksp22I	TGATCA	1 cut(s)	591
KspAI	GTTAAC	2 cut(s)	970, 1402
Kzo9I	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
LmnI	GCTCC	4 cut(s)	58, 468, 547, 1114
Lsp1109I	GCAGC	6 cut(s)	53, 418, 484, 537, 1871, 1970
LweI	GCATC	5 cut(s)	315, 425, 662, 1155, 1215
MaeI	CTAG	6 cut(s)	11, 428, 732, 758, 1019, 1601
MaeII	ACGT	1 cut(s)	1476
MaeIII	GTNAC	4 cut(s)	344, 1362, 1747, 1973
MalI	GATC	8 cut(s)	110, 593, 719, 756, 860, 1058, 1433, 1524
MboI	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
MfeI	CAATTG	2 cut(s)	504, 1107
MflI	RGATCY	2 cut(s)	108, 1522
MhlI	GDGCHC	2 cut(s)	302, 1940
MlyI	GAGTC	3 cut(s)	124, 531, 1655
MmeI	TCCRAC	1 cut(s)	1543
MroXI	GAANNNNTTC	2 cut(s)	663, 869
MseI	TTAA	8 cut(s)	582, 792, 911, 969, 1401, 1494, 1637, 2014
MslI	CAYNNNNRTG	4 cut(s)	138, 144, 368, 1371
MspA1I	CMGCKG	1 cut(s)	811
MspI	CCGG	5 cut(s)	279, 639, 668, 1617, 1901
MspR9I	CCNGG	5 cut(s)	280, 342, 639, 1191, 1902
MunI	CAATTG	2 cut(s)	504, 1107
MvaI	CCWGG	2 cut(s)	342, 1191
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	9 cut(s)	50, 112, 334, 437, 469, 547, 556, 1602, 1944
NciI	CCSGG	3 cut(s)	280, 639, 1902
NcoI	CCATGG	1 cut(s)	1591
NdeII	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
NlaIV	GGNNCC	3 cut(s)	464, 1806, 1920
NmuCI	GTSAC	3 cut(s)	344, 1362, 1747
NruI	TCGCGA	1 cut(s)	480
NsbI	TGCGCA	1 cut(s)	471
NspI	RCATGY	2 cut(s)	203, 248
OliI	CACNNNNGTG	1 cut(s)	368
PaeI	GCATGC	1 cut(s)	203
PceI	AGGCCT	3 cut(s)	9, 1246, 1328
PdmI	GAANNNNTTC	2 cut(s)	663, 869
PfeI	GAWTC	8 cut(s)	164, 312, 482, 805, 1045, 1407, 1483, 1925
PflFI	GACNNNGTC	2 cut(s)	1664, 1808
PinAI	ACCGGT	1 cut(s)	1616
PkrI	GCNGC	8 cut(s)	40, 43, 433, 474, 552, 1607, 1886, 1985
PleI	GAGTC	3 cut(s)	124, 530, 1655
PpsI	GAGTC	3 cut(s)	124, 530, 1655
PpuMI	RGGWCCY	1 cut(s)	1804
PshAI	GACNNNNGTC	1 cut(s)	134
PshBI	ATTAAT	1 cut(s)	911
Psp5II	RGGWCCY	1 cut(s)	1804
Psp6I	CCWGG	2 cut(s)	340, 1189
PspGI	CCWGG	2 cut(s)	340, 1189
PspN4I	GGNNCC	3 cut(s)	464, 1806, 1920
PspPI	GGNCC	4 cut(s)	1193, 1614, 1804, 1997
PspPPI	RGGWCCY	1 cut(s)	1804
PsuI	RGATCY	2 cut(s)	108, 1522
PsyI	GACNNNGTC	2 cut(s)	1664, 1808
PvuII	CAGCTG	1 cut(s)	811
RruI	TCGCGA	1 cut(s)	480
RsaI	GTAC	4 cut(s)	291, 1187, 1214, 1448
RsaNI	GTAC	4 cut(s)	290, 1186, 1213, 1447
RseI	CAYNNNNRTG	4 cut(s)	138, 144, 368, 1371
SalI	GTCGAC	2 cut(s)	1658, 1735
SaqAI	TTAA	8 cut(s)	582, 792, 911, 969, 1401, 1494, 1637, 2014
SatI	GCNGC	8 cut(s)	39, 42, 432, 473, 551, 1606, 1885, 1984
Sau3AI	GATC	8 cut(s)	108, 591, 717, 754, 858, 1056, 1431, 1522
Sau96I	GGNCC	4 cut(s)	1193, 1614, 1804, 1997
SchI	GAGTC	3 cut(s)	124, 531, 1655
ScrFI	CCNGG	5 cut(s)	280, 342, 639, 1191, 1902
SduI	GDGCHC	2 cut(s)	302, 1940
SfaNI	GCATC	5 cut(s)	315, 425, 662, 1155, 1215
SfcI	CTRYAG	1 cut(s)	1197
SinI	GGWCC	4 cut(s)	1193, 1614, 1804, 1997
SmiMI	CAYNNNNRTG	4 cut(s)	138, 144, 368, 1371
SmlI	CTYRAG	1 cut(s)	536
SmoI	CTYRAG	1 cut(s)	536
SpeI	ACTAGT	1 cut(s)	731
SphI	GCATGC	1 cut(s)	203
SseBI	AGGCCT	3 cut(s)	9, 1246, 1328
SsiI	CCGC	3 cut(s)	39, 1464, 1606
SspI	AATATT	2 cut(s)	611, 915
SspMI	CTAG	6 cut(s)	11, 428, 732, 758, 1019, 1601
StuI	AGGCCT	3 cut(s)	9, 1246, 1328
StyD4I	CCNGG	5 cut(s)	278, 340, 637, 1189, 1900
StyI	CCWWGG	3 cut(s)	30, 153, 1591
TaaI	ACNGT	8 cut(s)	370, 697, 967, 1180, 1362, 1741, 1952, 1997
TaiI	ACGT	1 cut(s)	1479
TaqI	TCGA	8 cut(s)	647, 945, 1043, 1146, 1281, 1659, 1736, 1928
TaqII	GACCGA	1 cut(s)	1654
TatI	WGTACW	2 cut(s)	1212, 1446
TauI	GCSGC	2 cut(s)	41, 1608
TfiI	GAWTC	8 cut(s)	164, 312, 482, 805, 1045, 1407, 1483, 1925
Tru1I	TTAA	8 cut(s)	582, 792, 911, 969, 1401, 1494, 1637, 2014
Tru9I	TTAA	8 cut(s)	582, 792, 911, 969, 1401, 1494, 1637, 2014
TscAI	CASTG	6 cut(s)	375, 426, 700, 1675, 1725, 1996
TseFI	GTSAC	3 cut(s)	344, 1362, 1747
TseI	GCWGC	6 cut(s)	41, 431, 472, 550, 1884, 1983
Tsp45I	GTSAC	3 cut(s)	344, 1362, 1747
TspDTI	ATGAA	6 cut(s)	163, 234, 390, 997, 1277, 1946
TspGWI	ACGGA	5 cut(s)	560, 1043, 1384, 1419, 1926
TspRI	CASTG	6 cut(s)	375, 426, 700, 1675, 1725, 1996
Tth111I	GACNNNGTC	2 cut(s)	1664, 1808
VneI	GTGCAC	1 cut(s)	298
VpaK11BI	GGWCC	4 cut(s)	1193, 1614, 1804, 1997
VspI	ATTAAT	1 cut(s)	911
XagI	CCTNNNNNAGG	1 cut(s)	1200
XapI	RAATTY	4 cut(s)	455, 632, 777, 1489
XbaI	TCTAGA	1 cut(s)	1018
XceI	RCATGY	2 cut(s)	203, 248
XmiI	GTMKAC	2 cut(s)	1659, 1736
XmnI	GAANNNNTTC	2 cut(s)	663, 869
XspI	CTAG	6 cut(s)	11, 428, 732, 758, 1019, 1601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.