Prupe.6G063400_v2.0.a1

Sugar phosphate phosphate translocator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000810
Physical Location & Seq
Reverse (-)
4367135 .. 4370250
3116 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G063400.2

Sequence Viewer

Length: 951 bp
ATGTCAGACAGGTTTTTCACGGTCGGATTAATAACAGCCTGGTACTCATCGAACATCGGAGTCTTGTTGTTGAACAAGTTTTTGCTGAGCAATTACGGGTTCAAGTACCCGATCTTCTTGACCCTTTGCCACATGCTGGCTTGCTCTCTCCTGAGCTACGTAGCCATTTCATGGATCAAGGTGGTGCCCATGCAGAGCATCAAGTCACGTGTCCAGTTCCTCAAGATATCGTCCCTCGGTTTCATCTTCTGTTTGTCCGTCGTTGGCGGGAACATCTCGCTCCGGTATCTGGCCGTGTCGTTTAACCAGGCTGTTGGCGCCACGACGCCGTTTTTCACCGCGGTGTTTGCGTATCTTATGACCCTCAAGAAAGAGGGCTGGCTCACCTATGTTACTCTCATACCGGTTGTCACCGGTGTTGTTATTGCCAGTGGGGGAGAACCAAGTTTTCATGTCTTCGGATTCATAATGTGTGTTGGTGCTACAGCAGCAAGGGCACTCAAGTCAGTGCTCCAAGGGATATTGCTGTCTTCTGAAGGGGAAAAGCTTAATTCTATGAACCTCCTCATGTACATGGGTCCTGTAGCTGTTGCATTCCTTCTACCTGCAGCACTTTATATGGAAGAGGATGTGGTTGGGATCACAATTGCACTTGCAAGAGATGATGTGTCCATCGTATGGTATCTAGTATTCAATTCTGCTCTCGCATATTTTGTCAATTTGACCAATTTCTTGGTAACAAAACACACCAGTGCCTTGACCCTCCAGGTAAAAATATTATCCCTCTTTGCAATTTTGAATTTATTTGTGACAAATGCATTATCCAAAACAAAGCTTAAATGTGGGACAAATGCGTGCCTGTTTGCCTACTTAATGCTACCTAGTCGAATCTCATCTCAATGCTCTCTTCGTTCTGAGAAAAACTTATGTGAGGTTGTTCATGTCACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPT

Protein Analysis

317

Amino Acids

34.66

Weight (kDa)

9.23

Isoelectric Point (pI)

32.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 613
AccB1I GGYRCC 2 cut(s) 184, 317
AccB7I CCANNNNNTGG 3 cut(s) 136, 171, 678
AccII CGCG 1 cut(s) 341
AciI CCGC 3 cut(s) 267, 339, 341
AclWI GGATC 2 cut(s) 182, 647
AcoI YGGCCR 1 cut(s) 291
AcsI RAATTY 1 cut(s) 799
AcuI CTGAAG 1 cut(s) 555
AcvI CACGTG 2 cut(s) 209, 948
AcyI GRCGYC 2 cut(s) 318, 326
AfaI GTAC 3 cut(s) 44, 107, 572
AfiI CCNNNNNNNGG 4 cut(s) 136, 171, 289, 678
AflIII ACRYGT 1 cut(s) 208
AgeI ACCGGT 2 cut(s) 403, 413
AgsI TTSAA 4 cut(s) 73, 103, 694, 799
AjnI CCWGG 3 cut(s) 38, 306, 765
AleI CACNNNNGTG 2 cut(s) 341, 750
AluBI AGCT 4 cut(s) 156, 547, 587, 835
AluI AGCT 4 cut(s) 156, 547, 587, 835
Alw21I GWGCWC 1 cut(s) 513
AlwI GGATC 2 cut(s) 182, 647
AoxI GGCC 1 cut(s) 291
ApeKI GCWGC 2 cut(s) 488, 608
ApoI RAATTY 1 cut(s) 799
AseI ATTAAT 1 cut(s) 29
AsiGI ACCGGT 2 cut(s) 403, 413
AspLEI GCGC 1 cut(s) 320
AspS9I GGNCC 1 cut(s) 578
AsuHPI GGTGA 3 cut(s) 328, 376, 403
AvaII GGWCC 1 cut(s) 578
BaeGI GKGCMC 2 cut(s) 189, 499
BanI GGYRCC 2 cut(s) 184, 317
BarI GAAGNNNNNNTAC 2 cut(s) 98, 130
BbrPI CACGTG 2 cut(s) 209, 948
BbsI GAAGAC 2 cut(s) 448, 522
Bbv12I GWGCWC 1 cut(s) 513
BbvI GCAGC 2 cut(s) 500, 620
BccI CCATC 1 cut(s) 680
BceAI ACGGC 2 cut(s) 278, 313
BciT130I CCWGG 3 cut(s) 40, 308, 767
BfaI CTAG 2 cut(s) 686, 882
BfmI CTRYAG 3 cut(s) 483, 582, 606
BfoI RGCGCY 1 cut(s) 321
BfuAI ACCTGC 1 cut(s) 613
BisI GCNGC 2 cut(s) 489, 609
BlpI GCTNAGC 1 cut(s) 86
BlsI GCNGC 2 cut(s) 490, 610
Bme1390I CCNGG 3 cut(s) 40, 308, 767
Bme18I GGWCC 1 cut(s) 578
BmgT120I GGNCC 1 cut(s) 578
BmiI GGNNCC 3 cut(s) 186, 319, 579
BmrFI CCNGG 3 cut(s) 40, 308, 767
BmsI GCATC 1 cut(s) 207
BpiI GAAGAC 2 cut(s) 448, 522
BpmI CTGGAG 1 cut(s) 749
Bpu10I CCTNAGC 1 cut(s) 152
Bpu1102I GCTNAGC 1 cut(s) 86
BpuEI CTTGAG 3 cut(s) 206, 350, 485
BsaAI YACGTR 3 cut(s) 160, 209, 948
BsaHI GRCGYC 2 cut(s) 318, 326
BsaJI CCNNGG 3 cut(s) 235, 339, 514
BsaWI WCCGGW 3 cut(s) 282, 403, 413
Bsc4I CCNNNNNNNGG 4 cut(s) 136, 171, 289, 678
Bse118I RCCGGY 2 cut(s) 403, 413
Bse1I ACTGG 3 cut(s) 214, 429, 750
BseBI CCWGG 3 cut(s) 40, 308, 767
BseDI CCNNGG 3 cut(s) 235, 339, 514
BseGI GGATG 1 cut(s) 634
BseLI CCNNNNNNNGG 4 cut(s) 136, 171, 289, 678
BseMII CTCAG 3 cut(s) 77, 143, 906
BseNI ACTGG 3 cut(s) 214, 429, 750
BseRI GAGGAG 1 cut(s) 554
BseSI GKGCMC 2 cut(s) 189, 499
BseXI GCAGC 2 cut(s) 500, 620
Bsh1236I CGCG 1 cut(s) 341
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 1 cut(s) 293
BshNI GGYRCC 2 cut(s) 184, 317
BshTI ACCGGT 2 cut(s) 403, 413
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 513
BsiSI CCGG 3 cut(s) 283, 404, 414
BslFI GGGAC 2 cut(s) 217, 859
BslI CCNNNNNNNGG 4 cut(s) 136, 171, 289, 678
BsmFI GGGAC 2 cut(s) 217, 859
BsmI GAATGC 1 cut(s) 593
BsnI GGCC 1 cut(s) 293
Bsp1286I GDGCHC 3 cut(s) 189, 499, 513
Bsp1407I TGTACA 1 cut(s) 570
Bsp143I GATC 3 cut(s) 111, 174, 639
Bsp1720I GCTNAGC 1 cut(s) 86
BspACI CCGC 3 cut(s) 267, 339, 341
BspANI GGCC 1 cut(s) 293
BspCNI CTCAG 3 cut(s) 78, 144, 907
BspFNI CGCG 1 cut(s) 341
BspLI GGNNCC 3 cut(s) 186, 319, 579
BspMAI CTGCAG 1 cut(s) 610
BspMI ACCTGC 1 cut(s) 613
BspPI GGATC 2 cut(s) 182, 647
BspT107I GGYRCC 2 cut(s) 184, 317
BsrFI RCCGGY 2 cut(s) 403, 413
BsrGI TGTACA 1 cut(s) 570
BsrI ACTGG 3 cut(s) 214, 429, 750
BssAI RCCGGY 2 cut(s) 403, 413
BssECI CCNNGG 3 cut(s) 235, 339, 514
BssMI GATC 3 cut(s) 111, 174, 639
BssNI GRCGYC 2 cut(s) 318, 326
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 3 cut(s) 40, 308, 767
Bst4CI ACNGT 1 cut(s) 22
Bst6I CTCTTC 2 cut(s) 618, 912
BstACI GRCGYC 2 cut(s) 318, 326
BstAUI TGTACA 1 cut(s) 570
BstBAI YACGTR 3 cut(s) 160, 209, 948
BstC8I GCNNGC 4 cut(s) 138, 142, 380, 856
BstDEI CTNAG 3 cut(s) 86, 152, 915
BstDSI CCRYGG 1 cut(s) 339
BstF5I GGATG 1 cut(s) 634
BstFNI CGCG 1 cut(s) 341
BstH2I RGCGCY 1 cut(s) 321
BstHHI GCGC 1 cut(s) 320
BstKTI GATC 3 cut(s) 114, 177, 642
BstMBI GATC 3 cut(s) 111, 174, 639
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 4 cut(s) 317, 347, 488, 494
BstNI CCWGG 3 cut(s) 40, 308, 767
BstNSI RCATGY 1 cut(s) 136
BstSCI CCNGG 3 cut(s) 38, 306, 765
BstSFI CTRYAG 3 cut(s) 483, 582, 606
BstSLI GKGCMC 2 cut(s) 189, 499
BstSNI TACGTA 1 cut(s) 160
BstUI CGCG 1 cut(s) 341
BstV1I GCAGC 2 cut(s) 500, 620
BstV2I GAAGAC 2 cut(s) 448, 522
BstXI CCANNNNNNTGG 2 cut(s) 314, 733
BsuRI GGCC 1 cut(s) 293
BtgI CCRYGG 1 cut(s) 339
BtsCI GGATG 1 cut(s) 634
BtsIMutI CAGTG 3 cut(s) 436, 513, 757
BveI ACCTGC 1 cut(s) 613
Cac8I GCNNGC 4 cut(s) 138, 142, 380, 856
CfoI GCGC 1 cut(s) 320
Cfr10I RCCGGY 2 cut(s) 403, 413
Cfr13I GGNCC 1 cut(s) 578
Cfr42I CCGCGG 1 cut(s) 342
CseI GACGC 1 cut(s) 334
Csp6I GTAC 3 cut(s) 43, 106, 571
CspAI ACCGGT 2 cut(s) 403, 413
CviAII CATG 7 cut(s) 133, 171, 190, 452, 568, 574, 941
CviQI GTAC 3 cut(s) 43, 106, 571
DdeI CTNAG 3 cut(s) 86, 152, 915
DinI GGCGCC 1 cut(s) 319
DpnI GATC 3 cut(s) 113, 176, 641
DpnII GATC 3 cut(s) 111, 174, 639
EaeI YGGCCR 1 cut(s) 291
Eam1104I CTCTTC 2 cut(s) 618, 912
EarI CTCTTC 2 cut(s) 618, 912
Eco105I TACGTA 1 cut(s) 160
Eco130I CCWWGG 1 cut(s) 514
Eco32I GATATC 1 cut(s) 228
Eco47I GGWCC 1 cut(s) 578
Eco57I CTGAAG 1 cut(s) 555
Eco72I CACGTG 2 cut(s) 209, 948
EcoO109I RGGNCCY 1 cut(s) 578
EcoRII CCWGG 3 cut(s) 38, 306, 765
EcoRV GATATC 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 514
EcoT22I ATGCAT 1 cut(s) 820
EgeI GGCGCC 1 cut(s) 319
EheI GGCGCC 1 cut(s) 319
ErhI CCWWGG 1 cut(s) 514
FaeI CATG 7 cut(s) 136, 174, 193, 455, 571, 577, 944
FaqI GGGAC 2 cut(s) 217, 859
FatI CATG 7 cut(s) 132, 170, 189, 451, 567, 573, 940
FauI CCCGC 1 cut(s) 260
Fnu4HI GCNGC 2 cut(s) 489, 609
FokI GGATG 1 cut(s) 641
Fsp4HI GCNGC 2 cut(s) 489, 609
FspBI CTAG 2 cut(s) 686, 882
GlaI GCGC 1 cut(s) 319
GluI GCNGC 2 cut(s) 489, 609
GsuI CTGGAG 1 cut(s) 749
HaeII RGCGCY 1 cut(s) 321
HaeIII GGCC 1 cut(s) 293
HapII CCGG 3 cut(s) 283, 404, 414
HgaI GACGC 1 cut(s) 334
HhaI GCGC 1 cut(s) 320
Hin1I GRCGYC 2 cut(s) 318, 326
Hin1II CATG 7 cut(s) 136, 174, 193, 455, 571, 577, 944
Hin6I GCGC 1 cut(s) 318
HinP1I GCGC 1 cut(s) 318
HindIII AAGCTT 2 cut(s) 545, 833
HinfI GANTC 3 cut(s) 60, 462, 888
HpaII CCGG 3 cut(s) 283, 404, 414
HphI GGTGA 3 cut(s) 328, 376, 403
Hpy188I TCNGA 6 cut(s) 7, 26, 59, 461, 535, 916
Hpy188III TCNNGA 4 cut(s) 118, 151, 223, 367
Hpy99I CGWCG 2 cut(s) 263, 328
HpyAV CCTTC 2 cut(s) 530, 608
HpyCH4III ACNGT 1 cut(s) 22
HpyCH4IV ACGT 3 cut(s) 159, 208, 947
HpyCH4V TGCA 7 cut(s) 193, 593, 608, 650, 656, 791, 818
HpyF10VI GCNNNNNNNGC 4 cut(s) 317, 347, 488, 494
HpyF3I CTNAG 3 cut(s) 86, 152, 915
HpySE526I ACGT 3 cut(s) 159, 208, 947
Hsp92I GRCGYC 2 cut(s) 318, 326
Hsp92II CATG 7 cut(s) 136, 174, 193, 455, 571, 577, 944
HspAI GCGC 1 cut(s) 318
KasI GGCGCC 1 cut(s) 317
KspI CCGCGG 1 cut(s) 342
Kzo9I GATC 3 cut(s) 111, 174, 639
LmnI GCTCC 2 cut(s) 285, 516
Lsp1109I GCAGC 2 cut(s) 500, 620
LweI GCATC 1 cut(s) 207
MaeI CTAG 2 cut(s) 686, 882
MaeII ACGT 3 cut(s) 159, 208, 947
MaeIII GTNAC 6 cut(s) 204, 391, 409, 736, 808, 943
MalI GATC 3 cut(s) 113, 176, 641
MboI GATC 3 cut(s) 111, 174, 639
MboII GAAGA 6 cut(s) 106, 238, 448, 522, 635, 899
MfeI CAATTG 1 cut(s) 645
MhlI GDGCHC 3 cut(s) 189, 499, 513
MluCI AATT 8 cut(s) 91, 550, 645, 694, 718, 727, 792, 799
Mly113I GGCGCC 1 cut(s) 318
MlyI GAGTC 1 cut(s) 69
MmeI TCCRAC 1 cut(s) 4
Mph1103I ATGCAT 1 cut(s) 820
MseI TTAA 5 cut(s) 29, 303, 549, 837, 872
MslI CAYNNNNRTG 4 cut(s) 341, 572, 750, 898
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 3 cut(s) 283, 404, 414
MspR9I CCNGG 3 cut(s) 40, 308, 767
MunI CAATTG 1 cut(s) 645
Mva1269I GAATGC 1 cut(s) 593
MvaI CCWGG 3 cut(s) 40, 308, 767
MvnI CGCG 1 cut(s) 341
MwoI GCNNNNNNNGC 4 cut(s) 317, 347, 488, 494
NarI GGCGCC 1 cut(s) 318
NdeII GATC 3 cut(s) 111, 174, 639
NlaIII CATG 7 cut(s) 136, 174, 193, 455, 571, 577, 944
NlaIV GGNNCC 3 cut(s) 186, 319, 579
NmuCI GTSAC 4 cut(s) 204, 409, 808, 943
NsiI ATGCAT 1 cut(s) 820
NspI RCATGY 1 cut(s) 136
OliI CACNNNNGTG 2 cut(s) 341, 750
PctI GAATGC 1 cut(s) 593
PfeI GAWTC 2 cut(s) 462, 888
PflMI CCANNNNNTGG 3 cut(s) 136, 171, 678
PinAI ACCGGT 2 cut(s) 403, 413
PkrI GCNGC 2 cut(s) 490, 610
PleI GAGTC 1 cut(s) 68
PluTI GGCGCC 1 cut(s) 321
PmaCI CACGTG 2 cut(s) 209, 948
PmlI CACGTG 2 cut(s) 209, 948
PpsI GAGTC 1 cut(s) 68
Ppu21I YACGTR 3 cut(s) 160, 209, 948
PpuMI RGGWCCY 1 cut(s) 578
PshBI ATTAAT 1 cut(s) 29
Psp5II RGGWCCY 1 cut(s) 578
Psp6I CCWGG 3 cut(s) 38, 306, 765
PspCI CACGTG 2 cut(s) 209, 948
PspGI CCWGG 3 cut(s) 38, 306, 765
PspN4I GGNNCC 3 cut(s) 186, 319, 579
PspPI GGNCC 1 cut(s) 578
PspPPI RGGWCCY 1 cut(s) 578
PstI CTGCAG 1 cut(s) 610
RsaI GTAC 3 cut(s) 44, 107, 572
RsaNI GTAC 3 cut(s) 43, 106, 571
RseI CAYNNNNRTG 4 cut(s) 341, 572, 750, 898
SacII CCGCGG 1 cut(s) 342
SaqAI TTAA 5 cut(s) 29, 303, 549, 837, 872
SatI GCNGC 2 cut(s) 489, 609
Sau3AI GATC 3 cut(s) 111, 174, 639
Sau96I GGNCC 1 cut(s) 578
SchI GAGTC 1 cut(s) 69
ScrFI CCNGG 3 cut(s) 40, 308, 767
SduI GDGCHC 3 cut(s) 189, 499, 513
SfaNI GCATC 1 cut(s) 207
SfcI CTRYAG 3 cut(s) 483, 582, 606
SfoI GGCGCC 1 cut(s) 319
Sfr303I CCGCGG 1 cut(s) 342
SgrAI CRCCGGYG 1 cut(s) 413
SgrBI CCGCGG 1 cut(s) 342
SinI GGWCC 1 cut(s) 578
SmiMI CAYNNNNRTG 4 cut(s) 341, 572, 750, 898
SmlI CTYRAG 3 cut(s) 221, 365, 500
SmoI CTYRAG 3 cut(s) 221, 365, 500
SnaBI TACGTA 1 cut(s) 160
Sse9I AATT 8 cut(s) 91, 550, 645, 694, 718, 727, 792, 799
SsiI CCGC 3 cut(s) 267, 339, 341
SspDI GGCGCC 1 cut(s) 317
SspI AATATT 1 cut(s) 777
SspMI CTAG 2 cut(s) 686, 882
StyD4I CCNGG 3 cut(s) 38, 306, 765
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 1 cut(s) 22
TaiI ACGT 3 cut(s) 162, 211, 950
TaqI TCGA 2 cut(s) 50, 886
TasI AATT 8 cut(s) 91, 550, 645, 694, 718, 727, 792, 799
TatI WGTACW 1 cut(s) 570
TfiI GAWTC 2 cut(s) 462, 888
Tru1I TTAA 5 cut(s) 29, 303, 549, 837, 872
Tru9I TTAA 5 cut(s) 29, 303, 549, 837, 872
TscAI CASTG 3 cut(s) 436, 513, 757
TseFI GTSAC 4 cut(s) 204, 409, 808, 943
TseI GCWGC 2 cut(s) 488, 608
Tsp45I GTSAC 4 cut(s) 204, 409, 808, 943
TspDTI ATGAA 6 cut(s) 159, 232, 440, 454, 572, 929
TspGWI ACGGA 1 cut(s) 247
TspRI CASTG 3 cut(s) 436, 513, 757
Van91I CCANNNNNTGG 3 cut(s) 136, 171, 678
VpaK11BI GGWCC 1 cut(s) 578
VspI ATTAAT 1 cut(s) 29
XapI RAATTY 1 cut(s) 799
XceI RCATGY 1 cut(s) 136
XspI CTAG 2 cut(s) 686, 882
Zsp2I ATGCAT 1 cut(s) 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.