Prupe.3G215500_v2.0.a1

Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001118
Physical Location & Seq
Reverse (-)
21828644 .. 21829878
1235 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G215500.1

Sequence Viewer

Length: 546 bp
ATGGCATCAAACCTCATACCAAACCTCAGTGACTTCTCCTTTTCACTACTACTGGTTCTAGCCATGGCTCCATTTTTAGCCCAATCCAGTGAGCTCAAAGAAACCCAATTGGTCTTGTACTTCCAAGACAACGTCTCTGCTGGTCCAAATGCCACAAGCTTACCAGTTGCAGGTATTGCAGGCAAGCTTTGGACCTTCACTCAATTTGGGACAGTTTATGTCACCGACGACCCATTAACCGCAGGCCCGGAACCAAACTCTGCCTCCATAGGCCGGGCCCAAGGCATAACTGTGGCAGCAGCCCTGAATGGACGGAATGCCCTTGTCTTGGTGTCACTTGTGTTCACAAACCAGGAGTATAATGGCAGCACACTAGAGCTACAAGGAAACAGCAAGCAATTTGAGCAAGTTAGAGAGGTGGCAGTAGTATCTGGTACTGGAAAGTTTCGATTTGCTAGGGGATACGCTACGTTTGAAACATATTTGGTGGACCCTGCCACTTCCTACTCCGTCGAGCGATGCAACGTCACGGTGCAACATTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Dirigent

Protein Analysis

182

Amino Acids

19.47

Weight (kDa)

4.89

Isoelectric Point (pI)

22.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 161
AciI CCGC 1 cut(s) 240
AfaI GTAC 2 cut(s) 119, 436
AfiI CCNNNNNNNGG 3 cut(s) 170, 273, 328
AgsI TTSAA 1 cut(s) 476
AjnI CCWGG 1 cut(s) 351
AluBI AGCT 4 cut(s) 94, 159, 187, 379
AluI AGCT 4 cut(s) 94, 159, 187, 379
Alw21I GWGCWC 1 cut(s) 96
Alw26I GTCTC 1 cut(s) 139
AoxI GGCC 3 cut(s) 244, 271, 276
ApaI GGGCCC 1 cut(s) 280
ApeKI GCWGC 3 cut(s) 296, 299, 366
AspS9I GGNCC 6 cut(s) 143, 192, 245, 276, 277, 490
AsuC2I CCSGG 2 cut(s) 248, 275
AsuHPI GGTGA 1 cut(s) 214
AvaII GGWCC 3 cut(s) 143, 192, 490
BaeGI GKGCMC 1 cut(s) 280
BanII GRGCYC 2 cut(s) 96, 280
Bbv12I GWGCWC 1 cut(s) 96
BbvI GCAGC 3 cut(s) 308, 311, 378
BciT130I CCWGG 1 cut(s) 353
BciVI GTATCC 1 cut(s) 455
BcnI CCSGG 2 cut(s) 248, 275
BcoDI GTCTC 1 cut(s) 139
BfaI CTAG 4 cut(s) 59, 374, 456, 544
BfuAI ACCTGC 1 cut(s) 161
BfuI GTATCC 1 cut(s) 455
BisI GCNGC 3 cut(s) 297, 300, 367
BlsI GCNGC 3 cut(s) 298, 301, 368
Bme1390I CCNGG 3 cut(s) 248, 275, 353
Bme18I GGWCC 3 cut(s) 143, 192, 490
BmgT120I GGNCC 6 cut(s) 143, 192, 245, 276, 277, 490
BmiI GGNNCC 4 cut(s) 69, 252, 278, 492
BmrFI CCNGG 3 cut(s) 248, 275, 353
BmsI GCATC 2 cut(s) 14, 509
BpuMI CCSGG 2 cut(s) 248, 275
BsaJI CCNNGG 2 cut(s) 63, 280
BsaXI ACNNNNNCTCC 2 cut(s) 248, 278
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 273, 328
Bse1I ACTGG 4 cut(s) 57, 87, 164, 442
BseBI CCWGG 1 cut(s) 353
BseDI CCNNGG 2 cut(s) 63, 280
BseLI CCNNNNNNNGG 3 cut(s) 170, 273, 328
BseMII CTCAG 1 cut(s) 40
BseNI ACTGG 4 cut(s) 57, 87, 164, 442
BseSI GKGCMC 1 cut(s) 280
BseXI GCAGC 3 cut(s) 308, 311, 378
BshFI GGCC 3 cut(s) 246, 273, 278
BsiHKAI GWGCWC 1 cut(s) 96
BsiSI CCGG 2 cut(s) 248, 274
BslFI GGGAC 1 cut(s) 223
BslI CCNNNNNNNGG 3 cut(s) 170, 273, 328
BsmAI GTCTC 1 cut(s) 139
BsmBI CGTCTC 1 cut(s) 139
BsmFI GGGAC 1 cut(s) 223
BsmI GAATGC 1 cut(s) 322
BsnI GGCC 3 cut(s) 246, 273, 278
Bsp120I GGGCCC 1 cut(s) 276
Bsp1286I GDGCHC 2 cut(s) 96, 280
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 1 cut(s) 240
BspANI GGCC 3 cut(s) 246, 273, 278
BspCNI CTCAG 1 cut(s) 39
BspLI GGNNCC 4 cut(s) 69, 252, 278, 492
BspMI ACCTGC 1 cut(s) 161
BsrI ACTGG 4 cut(s) 57, 87, 164, 442
BssECI CCNNGG 2 cut(s) 63, 280
BssT1I CCWWGG 2 cut(s) 63, 280
Bst2UI CCWGG 1 cut(s) 353
Bst4CI ACNGT 3 cut(s) 214, 292, 532
BstAPI GCANNNNNTGC 1 cut(s) 176
BstC8I GCNNGC 4 cut(s) 181, 185, 244, 395
BstDEI CTNAG 1 cut(s) 26
BstDSI CCRYGG 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 139
BstMWI GCNNNNNNNGC 2 cut(s) 176, 403
BstNI CCWGG 1 cut(s) 353
BstSCI CCNGG 3 cut(s) 246, 273, 351
BstSLI GKGCMC 1 cut(s) 280
BstV1I GCAGC 3 cut(s) 308, 311, 378
BsuI GTATCC 1 cut(s) 455
BsuRI GGCC 3 cut(s) 246, 273, 278
BtgI CCRYGG 1 cut(s) 63
BtgZI GCGATG 1 cut(s) 532
BtsIMutI CAGTG 2 cut(s) 34, 94
BveI ACCTGC 1 cut(s) 161
Cac8I GCNNGC 4 cut(s) 181, 185, 244, 395
Cfr13I GGNCC 6 cut(s) 143, 192, 245, 276, 277, 490
Csp6I GTAC 2 cut(s) 118, 435
CviAII CATG 1 cut(s) 64
CviQI GTAC 2 cut(s) 118, 435
DdeI CTNAG 1 cut(s) 26
Ecl136II GAGCTC 1 cut(s) 94
Eco130I CCWWGG 2 cut(s) 63, 280
Eco24I GRGCYC 2 cut(s) 96, 280
Eco47I GGWCC 3 cut(s) 143, 192, 490
Eco53kI GAGCTC 1 cut(s) 94
EcoICRI GAGCTC 1 cut(s) 94
EcoRII CCWGG 1 cut(s) 351
EcoT14I CCWWGG 2 cut(s) 63, 280
EcoT38I GRGCYC 2 cut(s) 96, 280
ErhI CCWWGG 2 cut(s) 63, 280
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 1 cut(s) 67
FaiI YATR 7 cut(s) 17, 65, 219, 269, 287, 360, 481
FaqI GGGAC 1 cut(s) 223
FatI CATG 1 cut(s) 63
Fnu4HI GCNGC 3 cut(s) 297, 300, 367
FriOI GRGCYC 2 cut(s) 96, 280
Fsp4HI GCNGC 3 cut(s) 297, 300, 367
FspBI CTAG 4 cut(s) 59, 374, 456, 544
GluI GCNGC 3 cut(s) 297, 300, 367
HaeIII GGCC 3 cut(s) 246, 273, 278
HapII CCGG 2 cut(s) 248, 274
Hin1II CATG 1 cut(s) 67
HindIII AAGCTT 2 cut(s) 157, 185
HpaII CCGG 2 cut(s) 248, 274
HphI GGTGA 1 cut(s) 214
Hpy166II GTNNAC 2 cut(s) 345, 490
Hpy8I GTNNAC 2 cut(s) 345, 490
Hpy99I CGWCG 2 cut(s) 230, 515
HpyAV CCTTC 1 cut(s) 205
HpyCH4III ACNGT 3 cut(s) 214, 292, 532
HpyCH4IV ACGT 3 cut(s) 132, 470, 525
HpyCH4V TGCA 4 cut(s) 170, 179, 522, 535
HpyF10VI GCNNNNNNNGC 2 cut(s) 176, 403
HpyF3I CTNAG 1 cut(s) 26
HpySE526I ACGT 3 cut(s) 132, 470, 525
Hsp92II CATG 1 cut(s) 67
LmnI GCTCC 1 cut(s) 73
Lsp1109I GCAGC 3 cut(s) 308, 311, 378
LweI GCATC 2 cut(s) 14, 509
MaeI CTAG 4 cut(s) 59, 374, 456, 544
MaeII ACGT 3 cut(s) 132, 470, 525
MaeIII GTNAC 4 cut(s) 29, 220, 333, 526
MfeI CAATTG 1 cut(s) 107
MhlI GDGCHC 2 cut(s) 96, 280
MluCI AATT 3 cut(s) 107, 203, 398
MnlI CCTC 4 cut(s) 23, 35, 274, 409
MseI TTAA 1 cut(s) 236
MslI CAYNNNNRTG 1 cut(s) 290
MspI CCGG 2 cut(s) 248, 274
MspR9I CCNGG 3 cut(s) 248, 275, 353
MunI CAATTG 1 cut(s) 107
Mva1269I GAATGC 1 cut(s) 322
MvaI CCWGG 1 cut(s) 353
MwoI GCNNNNNNNGC 2 cut(s) 176, 403
NciI CCSGG 2 cut(s) 248, 275
NcoI CCATGG 1 cut(s) 63
NlaIII CATG 1 cut(s) 67
NlaIV GGNNCC 4 cut(s) 69, 252, 278, 492
NmuCI GTSAC 4 cut(s) 29, 220, 333, 526
PctI GAATGC 1 cut(s) 322
PflFI GACNNNGTC 1 cut(s) 131
PkrI GCNGC 3 cut(s) 298, 301, 368
Psp124BI GAGCTC 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 351
PspGI CCWGG 1 cut(s) 351
PspN4I GGNNCC 4 cut(s) 69, 252, 278, 492
PspOMI GGGCCC 1 cut(s) 276
PspPI GGNCC 6 cut(s) 143, 192, 245, 276, 277, 490
PsyI GACNNNGTC 1 cut(s) 131
RsaI GTAC 2 cut(s) 119, 436
RsaNI GTAC 2 cut(s) 118, 435
RseI CAYNNNNRTG 1 cut(s) 290
SacI GAGCTC 1 cut(s) 96
SaqAI TTAA 1 cut(s) 236
SatI GCNGC 3 cut(s) 297, 300, 367
Sau96I GGNCC 6 cut(s) 143, 192, 245, 276, 277, 490
ScrFI CCNGG 3 cut(s) 248, 275, 353
SduI GDGCHC 2 cut(s) 96, 280
SfaNI GCATC 2 cut(s) 14, 509
SinI GGWCC 3 cut(s) 143, 192, 490
SmiMI CAYNNNNRTG 1 cut(s) 290
Sse9I AATT 3 cut(s) 107, 203, 398
SsiI CCGC 1 cut(s) 240
SspMI CTAG 4 cut(s) 59, 374, 456, 544
SstI GAGCTC 1 cut(s) 96
StyD4I CCNGG 3 cut(s) 246, 273, 351
StyI CCWWGG 2 cut(s) 63, 280
TaaI ACNGT 3 cut(s) 214, 292, 532
TaiI ACGT 3 cut(s) 135, 473, 528
TaqI TCGA 2 cut(s) 448, 513
TasI AATT 3 cut(s) 107, 203, 398
TatI WGTACW 1 cut(s) 117
Tru1I TTAA 1 cut(s) 236
Tru9I TTAA 1 cut(s) 236
TscAI CASTG 2 cut(s) 34, 94
TseFI GTSAC 4 cut(s) 29, 220, 333, 526
TseI GCWGC 3 cut(s) 296, 299, 366
Tsp45I GTSAC 4 cut(s) 29, 220, 333, 526
TspGWI ACGGA 2 cut(s) 328, 499
TspRI CASTG 2 cut(s) 34, 94
Tth111I GACNNNGTC 1 cut(s) 131
VpaK11BI GGWCC 3 cut(s) 143, 192, 490
XcmI CCANNNNNNNNNTGG 1 cut(s) 359
XspI CTAG 4 cut(s) 59, 374, 456, 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.