Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000920

Physical Location & Seq

Genomic Coordinates Reverse (-)

25633419 .. 25635861

Gene Structure 2443 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G280800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGGCATGGAGGTTAATTCACCAAGATGCTCTGCCAGTCGCAGCCATGCTGACAGTGGAATGCACCAACGTGGGCTTAAACGTCTTATTCAAGGCAGCCACCTCAAAAGGGCTAAGCTACTATGTCTTCATCGTCTACTCTAATATAATTGCCACTCTGGTTCTCCTCCCTCTGTTTTTCATCTTTCGCAGAACAGGGCTTCCTTCATTCAACCTCTCTCTGCTCTCCAAAATTTTCCTCCTCGGACTGATTGGGTTTTTGGCTGATATTTGTGGATATAAAGGTCTAAATTACAGCTCACCAACTCTATCTTCAGCCATGAGCAACCTCACTCCAGCATTTACCTTCATCCTTGCCGTCTTCTTCAGGATGGAAAAGCTAGCCTTGAGAAGCTCTAGCACTCAAGCCAAAATCATGGGCACTTTGGTATCAATATCAGGTGCACTCGTAGTGGTTCTTTACAAGGGCCCTACAATTTTATCCACTGCATCTACAGTTTTATCCCCTCCATCTGCAGTTTTAGGCACGTCAGAAAAAAATTGGGTTGTTGGAGGGCTACTACTTGCTGTTCAGTACCTCCTGTCCTCAACCTGGTATATCCTTCAGACCCATGTCATGAAGACGTACCCGGCAGAGATAGTTTTGGTCTTCTTATTCAACTTGTGTGGGACAATTATATCGGCTCCAGTATGTTTAATTGCAGAAACAAACTTGAGTGCCTGGAGACTAAGGCCTGGCATAGCATTGGTCGCCATTATATGCTCGGGATGCCTTGGCTCATCTTTCAGCTCCCTTGTGCACACATGGGGCCTGCACTTGAAAGGGCCTGTGTTTATATCAATCTTCAAGCCATTGTCAATTGCCATTGCTGCTGCTTTCAGTGTCATATTCCTTGGTGATGCCCTCTCTCTTGGGAGTGTTGTTGGAGCTATAATACTTTCCATGGGCTTTTATGCTGTGATATGGGGTAAAGCAAAGGAAGACGAAACGAGTGAAGACTGCCGCTTTGAAAGCTCGAGAGCCTTACCCATTGCTCTTGGAAAAACCCCTTTGTTGGAAAGCCACAAAGTTGAAAATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

361

Amino Acids

38.72

Weight (kDa)

9.13

Isoelectric Point (pI)

35.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15540 AT4G15540 AT5G40230 AT5G40240 AT5G40240 AT5G40240
fragaria_vesca	FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50391
malus_domestica	MD09G1036800.v1.1
prunus_persica	Prupe.3G280800_v2.0.a1 Prupe.3G280800_v2.0.a1 Prupe.3G280800_v2.0.a1 Prupe.3G280800_v2.0.a1
pyrus_communis	pycom111g02960
rosa_chinensis	RchiOBHm_Chr2g0170711 RchiOBHm_Chr2g0170721 RchiOBHm_Chr2g0170741 RchiOBHm_Chr2g0170751 RchiOBHm_Chr2g0170771 RchiOBHm_Chr2g0170791
rosa_laevigata	RLG00000021977 RLG00000021978 RLG00000021979 RLG00000021980
rosa_multiflora	Rmu_co8399817.1_g000001 Rmu_sc0003787.1_g000001 Rmu_sc0003787.1_g000006 Rmu_sc0030505.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042170 Rroxscaffold_2G00081070 Rroxscaffold_2G00081080 Rroxscaffold_2G00081090 Rroxscaffold_2G00081100 Rroxscaffold_2G00096620 Rroxscaffold_6G00402650
rosa_rugosa	Rorug02G0550600 Rorug02G0550700 Rorug02G0550800 Rorug02G0550900 Rorug02G0551000 Rorug02G0551100 Rorug02G0551200
rosa_samantha	Rh2AG623600 Rh2AG623700 Rh2AG623800 Rh2BG634100 Rh2BG634200 Rh2BG634300 Rh2BG634400 Rh2BG634500 Rh2BG634600 Rh2CG603400 Rh2DG646600
rosa_wichuraiana	Rw2G051650 Rw2G051660 Rw2G051670 Rw2G051680 Rw2G051690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	135
AciI	CCGC	1 cut(s)	1003
AcsI	RAATTY	1 cut(s)	231
AcuI	CTGAAG	3 cut(s)	297, 349, 587
AfaI	GTAC	2 cut(s)	575, 626
AfiI	CCNNNNNNNGG	3 cut(s)	108, 591, 1054
AgsI	TTSAA	7 cut(s)	91, 211, 658, 820, 847, 1010, 1073
AjiI	CACGTC	1 cut(s)	528
AjnI	CCWGG	3 cut(s)	590, 719, 733
AjuI	GAANNNNNNNTTGG	2 cut(s)	295, 327
AleI	CACNNNNGTG	1 cut(s)	68
AloI	GAACNNNNNNTCC	2 cut(s)	184, 216
AluBI	AGCT	7 cut(s)	117, 297, 379, 393, 789, 929, 1014
AluI	AGCT	7 cut(s)	117, 297, 379, 393, 789, 929, 1014
Alw21I	GWGCWC	2 cut(s)	445, 801
Alw26I	GTCTC	1 cut(s)	718
Alw44I	GTGCAC	2 cut(s)	441, 797
Ama87I	CYCGRG	2 cut(s)	763, 1015
AoxI	GGCC	4 cut(s)	466, 731, 808, 824
ApaI	GGGCCC	1 cut(s)	470
ApaLI	GTGCAC	2 cut(s)	441, 797
ApeKI	GCWGC	4 cut(s)	41, 95, 869, 872
ApoI	RAATTY	1 cut(s)	231
ArsI	GACNNNNNNTTYG	2 cut(s)	989, 1021
AspS9I	GGNCC	4 cut(s)	466, 467, 808, 824
AsuC2I	CCSGG	1 cut(s)	629
AsuHPI	GGTGA	3 cut(s)	11, 291, 908
AsuNHI	GCTAGC	1 cut(s)	379
AvaI	CYCGRG	2 cut(s)	763, 1015
BaeGI	GKGCMC	4 cut(s)	422, 445, 470, 801
BaeI	ACNNNNGTAYC	2 cut(s)	411, 444
BanII	GRGCYC	1 cut(s)	470
BbsI	GAAGAC	6 cut(s)	118, 352, 626, 640, 987, 1002
Bbv12I	GWGCWC	2 cut(s)	445, 801
BbvI	GCAGC	4 cut(s)	53, 107, 856, 859
BccI	CCATC	2 cut(s)	364, 517
BceAI	ACGGC	1 cut(s)	341
BciT130I	CCWGG	3 cut(s)	592, 721, 735
BcnI	CCSGG	1 cut(s)	629
BcoDI	GTCTC	1 cut(s)	718
BfaI	CTAG	2 cut(s)	380, 396
BfmI	CTRYAG	2 cut(s)	492, 513
BisI	GCNGC	5 cut(s)	42, 96, 870, 873, 1003
BlpI	GCTNAGC	1 cut(s)	113
BlsI	GCNGC	5 cut(s)	43, 97, 871, 874, 1004
Bme1390I	CCNGG	4 cut(s)	592, 629, 721, 735
BmeT110I	CYCGRG	2 cut(s)	763, 1015
BmgBI	CACGTC	1 cut(s)	528
BmgT120I	GGNCC	4 cut(s)	466, 467, 808, 824
BmiI	GGNNCC	3 cut(s)	468, 684, 809
BmrFI	CCNGG	4 cut(s)	592, 629, 721, 735
BmsI	GCATC	4 cut(s)	16, 497, 758, 889
BmtI	GCTAGC	1 cut(s)	383
BoxI	GACNNNNGTC	1 cut(s)	611
BpiI	GAAGAC	6 cut(s)	118, 352, 626, 640, 987, 1002
BpmI	CTGGAG	3 cut(s)	318, 669, 742
Bpu1102I	GCTNAGC	1 cut(s)	113
BpuEI	CTTGAG	3 cut(s)	387, 406, 733
BpuMI	CCSGG	1 cut(s)	629
BsaJI	CCNNGG	4 cut(s)	241, 772, 892, 942
Bsc4I	CCNNNNNNNGG	3 cut(s)	108, 591, 1054
Bse1I	ACTGG	2 cut(s)	35, 686
Bse3DI	GCAATG	2 cut(s)	864, 1029
BseBI	CCWGG	3 cut(s)	592, 721, 735
BseDI	CCNNGG	4 cut(s)	241, 772, 892, 942
BseGI	GGATG	3 cut(s)	348, 375, 773
BseLI	CCNNNNNNNGG	3 cut(s)	108, 591, 1054
BseMI	GCAATG	2 cut(s)	864, 1029
BseNI	ACTGG	2 cut(s)	35, 686
BseRI	GAGGAG	2 cut(s)	155, 230
BseSI	GKGCMC	4 cut(s)	422, 445, 470, 801
BseXI	GCAGC	4 cut(s)	53, 107, 856, 859
BsgI	GTGCAG	1 cut(s)	797
BshFI	GGCC	4 cut(s)	468, 733, 810, 826
BsiHKAI	GWGCWC	2 cut(s)	445, 801
BsiHKCI	CYCGRG	2 cut(s)	763, 1015
BsiSI	CCGG	1 cut(s)	629
BslFI	GGGAC	1 cut(s)	682
BslI	CCNNNNNNNGG	3 cut(s)	108, 591, 1054
BsmAI	GTCTC	1 cut(s)	718
BsmFI	GGGAC	1 cut(s)	682
BsmI	GAATGC	1 cut(s)	65
BsnI	GGCC	4 cut(s)	468, 733, 810, 826
BsoBI	CYCGRG	2 cut(s)	763, 1015
Bsp120I	GGGCCC	1 cut(s)	466
Bsp1286I	GDGCHC	4 cut(s)	422, 445, 470, 801
Bsp1720I	GCTNAGC	1 cut(s)	113
Bsp19I	CCATGG	1 cut(s)	942
BspACI	CCGC	1 cut(s)	1003
BspANI	GGCC	4 cut(s)	468, 733, 810, 826
BspHI	TCATGA	1 cut(s)	615
BspLI	GGNNCC	3 cut(s)	468, 684, 809
BspMAI	CTGCAG	1 cut(s)	517
BspOI	GCTAGC	1 cut(s)	383
BsrDI	GCAATG	2 cut(s)	864, 1029
BsrI	ACTGG	2 cut(s)	35, 686
BssECI	CCNNGG	4 cut(s)	241, 772, 892, 942
BssT1I	CCWWGG	3 cut(s)	772, 892, 942
Bst2UI	CCWGG	3 cut(s)	592, 721, 735
Bst4CI	ACNGT	2 cut(s)	55, 496
BstC8I	GCNNGC	2 cut(s)	381, 812
BstDEI	CTNAG	2 cut(s)	113, 728
BstDSI	CCRYGG	1 cut(s)	942
BstF5I	GGATG	3 cut(s)	348, 375, 773
BstMAI	GTCTC	1 cut(s)	718
BstMWI	GCNNNNNNNGC	4 cut(s)	749, 768, 869, 1011
BstNI	CCWGG	3 cut(s)	592, 721, 735
BstPAI	GACNNNNGTC	1 cut(s)	611
BstSCI	CCNGG	4 cut(s)	590, 627, 719, 733
BstSFI	CTRYAG	2 cut(s)	492, 513
BstSLI	GKGCMC	4 cut(s)	422, 445, 470, 801
BstV1I	GCAGC	4 cut(s)	53, 107, 856, 859
BstV2I	GAAGAC	6 cut(s)	118, 352, 626, 640, 987, 1002
BstXI	CCANNNNNNTGG	1 cut(s)	415
BsuRI	GGCC	4 cut(s)	468, 733, 810, 826
BtgI	CCRYGG	1 cut(s)	942
BtrI	CACGTC	1 cut(s)	528
BtsCI	GGATG	3 cut(s)	348, 375, 773
BtsI	GCAGTG	1 cut(s)	483
BtsIMutI	CAGTG	3 cut(s)	60, 483, 886
Cac8I	GCNNGC	2 cut(s)	381, 812
CciI	TCATGA	1 cut(s)	615
Cfr13I	GGNCC	4 cut(s)	466, 467, 808, 824
CsiI	ACCWGGT	1 cut(s)	590
Csp6I	GTAC	2 cut(s)	574, 625
CspCI	CAANNNNNGTGG	2 cut(s)	646, 681
CviAII	CATG	8 cut(s)	6, 46, 319, 415, 611, 616, 804, 943
CviQI	GTAC	2 cut(s)	574, 625
DdeI	CTNAG	2 cut(s)	113, 728
Eco130I	CCWWGG	3 cut(s)	772, 892, 942
Eco147I	AGGCCT	1 cut(s)	733
Eco24I	GRGCYC	1 cut(s)	470
Eco57I	CTGAAG	3 cut(s)	297, 349, 587
Eco88I	CYCGRG	2 cut(s)	763, 1015
EcoO109I	RGGNCCY	4 cut(s)	466, 467, 808, 824
EcoRII	CCWGG	3 cut(s)	590, 719, 733
EcoT14I	CCWWGG	3 cut(s)	772, 892, 942
EcoT38I	GRGCYC	1 cut(s)	470
ErhI	CCWWGG	3 cut(s)	772, 892, 942
FaeI	CATG	8 cut(s)	9, 49, 322, 418, 614, 619, 807, 946
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	1 cut(s)	682
FatI	CATG	8 cut(s)	5, 45, 318, 414, 610, 615, 803, 942
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	5 cut(s)	42, 96, 870, 873, 1003
FokI	GGATG	3 cut(s)	335, 382, 780
FriOI	GRGCYC	1 cut(s)	470
Fsp4HI	GCNGC	5 cut(s)	42, 96, 870, 873, 1003
FspBI	CTAG	2 cut(s)	380, 396
GluI	GCNGC	5 cut(s)	42, 96, 870, 873, 1003
GsuI	CTGGAG	3 cut(s)	318, 669, 742
HaeIII	GGCC	4 cut(s)	468, 733, 810, 826
HapII	CCGG	1 cut(s)	629
Hin1II	CATG	8 cut(s)	9, 49, 322, 418, 614, 619, 807, 946
HpaII	CCGG	1 cut(s)	629
HphI	GGTGA	3 cut(s)	11, 291, 908
Hpy166II	GTNNAC	3 cut(s)	136, 443, 799
Hpy188I	TCNGA	3 cut(s)	245, 532, 606
Hpy188III	TCNNGA	4 cut(s)	367, 616, 765, 1017
Hpy8I	GTNNAC	3 cut(s)	136, 443, 799
HpyAV	CCTTC	3 cut(s)	213, 355, 611
HpyCH4III	ACNGT	2 cut(s)	55, 496
HpyCH4IV	ACGT	4 cut(s)	69, 81, 527, 623
HpyCH4V	TGCA	7 cut(s)	63, 443, 488, 515, 701, 799, 814
HpyF10VI	GCNNNNNNNGC	4 cut(s)	749, 768, 869, 1011
HpyF3I	CTNAG	2 cut(s)	113, 728
HpySE526I	ACGT	4 cut(s)	69, 81, 527, 623
Hsp92II	CATG	8 cut(s)	9, 49, 322, 418, 614, 619, 807, 946
LmnI	GCTCC	3 cut(s)	688, 794, 926
Lsp1109I	GCAGC	4 cut(s)	53, 107, 856, 859
LweI	GCATC	4 cut(s)	16, 497, 758, 889
MabI	ACCWGGT	1 cut(s)	590
MaeI	CTAG	2 cut(s)	380, 396
MaeII	ACGT	4 cut(s)	69, 81, 527, 623
MboII	GAAGA	9 cut(s)	118, 303, 352, 355, 631, 640, 835, 992, 1007
MfeI	CAATTG	1 cut(s)	858
MhlI	GDGCHC	4 cut(s)	422, 445, 470, 801
MluCI	AATT	9 cut(s)	15, 147, 231, 289, 474, 538, 672, 696, 858
MmeI	TCCRAC	3 cut(s)	529, 904, 1035
MseI	TTAA	3 cut(s)	14, 77, 695
MslI	CAYNNNNRTG	2 cut(s)	24, 68
MspI	CCGG	1 cut(s)	629
MspR9I	CCNGG	4 cut(s)	592, 629, 721, 735
MunI	CAATTG	1 cut(s)	858
Mva1269I	GAATGC	1 cut(s)	65
MvaI	CCWGG	3 cut(s)	592, 721, 735
MwoI	GCNNNNNNNGC	4 cut(s)	749, 768, 869, 1011
NciI	CCSGG	1 cut(s)	629
NcoI	CCATGG	1 cut(s)	942
NheI	GCTAGC	1 cut(s)	379
NlaIII	CATG	8 cut(s)	9, 49, 322, 418, 614, 619, 807, 946
NlaIV	GGNNCC	3 cut(s)	468, 684, 809
OliI	CACNNNNGTG	1 cut(s)	68
PaeR7I	CTCGAG	1 cut(s)	1015
PagI	TCATGA	1 cut(s)	615
PceI	AGGCCT	1 cut(s)	733
PctI	GAATGC	1 cut(s)	65
PkrI	GCNGC	5 cut(s)	43, 97, 871, 874, 1004
PshAI	GACNNNNGTC	1 cut(s)	611
Psp6I	CCWGG	3 cut(s)	590, 719, 733
PspGI	CCWGG	3 cut(s)	590, 719, 733
PspN4I	GGNNCC	3 cut(s)	468, 684, 809
PspOMI	GGGCCC	1 cut(s)	466
PspPI	GGNCC	4 cut(s)	466, 467, 808, 824
PstI	CTGCAG	1 cut(s)	517
RsaI	GTAC	2 cut(s)	575, 626
RsaNI	GTAC	2 cut(s)	574, 625
RseI	CAYNNNNRTG	2 cut(s)	24, 68
SaqAI	TTAA	3 cut(s)	14, 77, 695
SatI	GCNGC	5 cut(s)	42, 96, 870, 873, 1003
Sau96I	GGNCC	4 cut(s)	466, 467, 808, 824
ScrFI	CCNGG	4 cut(s)	592, 629, 721, 735
SduI	GDGCHC	4 cut(s)	422, 445, 470, 801
SexAI	ACCWGGT	1 cut(s)	590
SfaNI	GCATC	4 cut(s)	16, 497, 758, 889
SfcI	CTRYAG	2 cut(s)	492, 513
Sfr274I	CTCGAG	1 cut(s)	1015
SlaI	CTCGAG	1 cut(s)	1015
SmiMI	CAYNNNNRTG	2 cut(s)	24, 68
SmlI	CTYRAG	4 cut(s)	385, 402, 712, 1015
SmoI	CTYRAG	4 cut(s)	385, 402, 712, 1015
Sse9I	AATT	9 cut(s)	15, 147, 231, 289, 474, 538, 672, 696, 858
SseBI	AGGCCT	1 cut(s)	733
SsiI	CCGC	1 cut(s)	1003
SspMI	CTAG	2 cut(s)	380, 396
StuI	AGGCCT	1 cut(s)	733
StyD4I	CCNGG	4 cut(s)	590, 627, 719, 733
StyI	CCWWGG	3 cut(s)	772, 892, 942
TaaI	ACNGT	2 cut(s)	55, 496
TaiI	ACGT	4 cut(s)	72, 84, 530, 626
TaqI	TCGA	1 cut(s)	1016
TasI	AATT	9 cut(s)	15, 147, 231, 289, 474, 538, 672, 696, 858
TauI	GCSGC	1 cut(s)	1005
Tru1I	TTAA	3 cut(s)	14, 77, 695
Tru9I	TTAA	3 cut(s)	14, 77, 695
TscAI	CASTG	3 cut(s)	60, 490, 886
TseI	GCWGC	4 cut(s)	41, 95, 869, 872
TspDTI	ATGAA	5 cut(s)	118, 169, 195, 337, 632
TspRI	CASTG	3 cut(s)	60, 490, 886
VneI	GTGCAC	2 cut(s)	441, 797
XapI	RAATTY	1 cut(s)	231
XcmI	CCANNNNNNNNNTGG	1 cut(s)	52
XhoI	CTCGAG	1 cut(s)	1015
XmiI	GTMKAC	1 cut(s)	135
XspI	CTAG	2 cut(s)	380, 396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.