Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000920

Physical Location & Seq

Genomic Coordinates Forward (+)

67829336 .. 67832714

Gene Structure 3379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0551000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGTTTGACATATTGTTCGGGTGGAGAAAAGCTTCAAAGTGCAAGCAGCTGATCAAACAGGTGCAGTGCCGGCTCAAGTTGCTGAAGATCAAGAGGGCTACTATTGTGAGGCAATTGCGAGAAGACGCGGCGGAGCTGATCAAGAATGGCTACGAAGGCAAAGCCTTCAATAGGGTTGAGCAGATAATCAAAGATGAATGCATAGTGGCAGTGTATGAACTGTTGGATAATTTCTGTGAATTTATCCTCCTTCACCTTTCATATATCCGAAGACACAAGGACTGTCCAAATGACATAAATGAAGCAGTTTCAAGTCTTATATATGCTTCTGCTAGATGTGGAGATCTCCCTGAGCTTAGAACAATCCGAAAGCTCTTCGGAGAACGTTATGGTCAGAAATATGTGATTTCTGCTCTTGAACTATTCCCCGGGAACCTTGTGAACTGTCAGGTAATAGAGAAACTGTCCCTAAAGTCAGTAACAGATGATATGAAGCACAGATTGGTCAATGAAATAGCAAGGAATTACTGCATCAAACCAGAGGTTTTAGCCATCGAATACTATTCCGATTGGCAACAGAAGGTAAAGGAAATTAGTGGACATCAAGCACTGGATTCAAATGTTCGGACTTATTACAAAAGATCTGAAATGCAAATTTGCTCTGTCGAAGGACTTGAAACAGAAGATGTTCATGATTCCAGTATATCTACTACTACTTCTTCAGTAGCTAAGCTGGCCCCGACTATATCAGACTCTCCGGTGCATAATGAAATACAGGAAGAACAGGACTTTGCTGAAGTGGATTCTCCAAGGGGTGGAGAAATAGTGGTGTACAATAATGACATTGAAGAGGTTCAGTCTTGCACAACAAGAGATGGAGATGACAGCCAGGACCAAAGAGCTTTCAAGTTCAAAGCTAGTGTTCCGAAAAAGGAGAATCTTGAAAACAGCTTTGATCGTGGTCATGTGAACACATGGAGTGTGAATTCAGGGTCAAGAGTCTCTACGAGAAGTTTTGGGGGAAATGGGAAAAGACCAAGGAAGAGATCAGTGTCTCAGGAAAATCAGTTTTCGAAGGATAGTGAAATATTTCCAAGTTACTATGCTAGGAAGCATCAGAAGAAATTGGGACCTAACATTTTGTCATGCAAGTGCAGCCTGGTAAATCCATGTTATGTTTGCAATGGGAATGAAAATGTCGAATTTGAAGTTCCAACATTGAAGCAAAATAGAGGGATTTCAACTAGGGTGGGATTTGCTAATCCTGGTCATGAACATAAAAGTTTGGTGTACAATGTTTTCACTTACCCTGATCACCAGCCAAAACAGCAAAGCAAAGCGTTCAAAGGAAACATAGAGGAATCTGGTTTTCAATGCAAGCTTCCCTCTTATACTTCGTCTTCATCATCATCATCTTCTCCAACTGTGACTAGTTCTTGGACGAGAAAAGAAATGGTACCTCCTTACTTCAGAAATGTGACAATGCCGCCGGAAAGAGTCAACGACAAGCGGAAAGAAGAGTTTCAACGATCCATTTCGGACTGTTTTCAGTATCCTACTCATGTTCATCCAAAGCTGCCAGATTATGATGATATTGCAGCTAAATTCATGGCTCTCAAGAAAGAACGTCTTCAAACTAAGCCTCCTCTCAGCAATCAGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

554

Amino Acids

63.37

Weight (kDa)

8.67

Isoelectric Point (pI)

49.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ist1	PF03398	15 - 178	6.4e-50	Regulator of Vps4 activity in the MVB pathway

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15540 AT4G15540 AT5G40230 AT5G40240 AT5G40240 AT5G40240
fragaria_vesca	FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50361 FvH4_6g50391
malus_domestica	MD09G1036800.v1.1
prunus_persica	Prupe.3G280800_v2.0.a1 Prupe.3G280800_v2.0.a1 Prupe.3G280800_v2.0.a1 Prupe.3G280800_v2.0.a1
pyrus_communis	pycom111g02960
rosa_chinensis	RchiOBHm_Chr2g0170711 RchiOBHm_Chr2g0170721 RchiOBHm_Chr2g0170741 RchiOBHm_Chr2g0170751 RchiOBHm_Chr2g0170771 RchiOBHm_Chr2g0170791
rosa_laevigata	RLG00000021977 RLG00000021978 RLG00000021979 RLG00000021980
rosa_multiflora	Rmu_co8399817.1_g000001 Rmu_sc0003787.1_g000001 Rmu_sc0003787.1_g000006 Rmu_sc0030505.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042170 Rroxscaffold_2G00081070 Rroxscaffold_2G00081080 Rroxscaffold_2G00081090 Rroxscaffold_2G00081100 Rroxscaffold_2G00096620 Rroxscaffold_6G00402650
rosa_rugosa	Rorug02G0550600 Rorug02G0550700 Rorug02G0550800 Rorug02G0550900 Rorug02G0551000 Rorug02G0551100 Rorug02G0551200
rosa_samantha	Rh2AG623600 Rh2AG623700 Rh2AG623800 Rh2BG634100 Rh2BG634200 Rh2BG634300 Rh2BG634400 Rh2BG634500 Rh2BG634600 Rh2CG603400 Rh2DG646600
rosa_wichuraiana	Rw2G051650 Rw2G051660 Rw2G051670 Rw2G051680 Rw2G051690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1456
AccB1I	GGYRCC	1 cut(s)	1456
AccB7I	CCANNNNNTGG	1 cut(s)	815
AccII	CGCG	1 cut(s)	128
AciI	CCGC	4 cut(s)	128, 131, 1487, 1510
AclI	AACGTT	1 cut(s)	385
AclWI	GGATC	1 cut(s)	1524
AcsI	RAATTY	5 cut(s)	239, 654, 985, 1202, 1604
AcuI	CTGAAG	4 cut(s)	104, 705, 816, 1453
AfaI	GTAC	3 cut(s)	833, 1292, 1458
AfiI	CCNNNNNNNGG	2 cut(s)	171, 815
AhlI	ACTAGT	1 cut(s)	1430
AjnI	CCWGG	3 cut(s)	888, 1158, 1264
AjuI	GAANNNNNNNTTGG	2 cut(s)	485, 517
Alw26I	GTCTC	2 cut(s)	1006, 1059
AlwI	GGATC	1 cut(s)	1524
Ama87I	CYCGRG	1 cut(s)	428
AoxI	GGCC	1 cut(s)	735
ApeKI	GCWGC	4 cut(s)	46, 1155, 1576, 1598
ApoI	RAATTY	5 cut(s)	239, 654, 985, 1202, 1604
ArsI	GACNNNNNNTTYG	1 cut(s)	31
Asp700I	GAANNNNTTC	6 cut(s)	31, 687, 852, 1089, 1521, 1629
Asp718I	GGTACC	1 cut(s)	1456
AspS9I	GGNCC	3 cut(s)	736, 892, 1130
AsuC2I	CCSGG	2 cut(s)	429, 430
AsuHPI	GGTGA	2 cut(s)	245, 1307
AsuII	TTCGAA	1 cut(s)	1073
AvaI	CYCGRG	1 cut(s)	428
AvaII	GGWCC	2 cut(s)	892, 1130
BanI	GGYRCC	1 cut(s)	1456
BbsI	GAAGAC	4 cut(s)	129, 277, 1392, 1622
BbvI	GCAGC	4 cut(s)	58, 1167, 1563, 1610
BccI	CCATC	2 cut(s)	560, 869
BciT130I	CCWGG	3 cut(s)	890, 1160, 1266
BciVI	GTATCC	1 cut(s)	1563
BclI	TGATCA	3 cut(s)	51, 138, 1312
BcnI	CCSGG	2 cut(s)	429, 430
BcoDI	GTCTC	2 cut(s)	1006, 1059
BcuI	ACTAGT	1 cut(s)	1430
BfaI	CTAG	5 cut(s)	333, 918, 1107, 1245, 1431
BfuI	GTATCC	1 cut(s)	1563
BglII	AGATCT	2 cut(s)	343, 641
BisI	GCNGC	6 cut(s)	47, 129, 1156, 1487, 1577, 1599
BlpI	GCTNAGC	1 cut(s)	729
BlsI	GCNGC	6 cut(s)	48, 130, 1157, 1488, 1578, 1600
Bme1390I	CCNGG	5 cut(s)	429, 430, 890, 1160, 1266
Bme18I	GGWCC	2 cut(s)	892, 1130
BmeT110I	CYCGRG	1 cut(s)	428
BmgT120I	GGNCC	3 cut(s)	736, 892, 1130
BmiI	GGNNCC	4 cut(s)	434, 738, 1131, 1458
BmrFI	CCNGG	5 cut(s)	429, 430, 890, 1160, 1266
BmsI	GCATC	2 cut(s)	540, 1123
BpiI	GAAGAC	4 cut(s)	129, 277, 1392, 1622
Bpu10I	CCTNAGC	1 cut(s)	351
Bpu1102I	GCTNAGC	1 cut(s)	729
Bpu14I	TTCGAA	1 cut(s)	1073
BpuEI	CTTGAG	2 cut(s)	59, 1601
BpuMI	CCSGG	2 cut(s)	429, 430
BsaJI	CCNNGG	4 cut(s)	427, 428, 809, 1037
BsaWI	WCCGGW	1 cut(s)	757
BsaXI	ACNNNNNCTCC	4 cut(s)	810, 840, 1627, 1657
Bsc4I	CCNNNNNNNGG	2 cut(s)	171, 815
Bse118I	RCCGGY	1 cut(s)	69
Bse1I	ACTGG	2 cut(s)	615, 699
Bse3DI	GCAATG	1 cut(s)	1189
BseBI	CCWGG	3 cut(s)	890, 1160, 1266
BseDI	CCNNGG	4 cut(s)	427, 428, 809, 1037
BseGI	GGATG	1 cut(s)	1567
BseLI	CCNNNNNNNGG	2 cut(s)	171, 815
BseMI	GCAATG	1 cut(s)	1189
BseMII	CTCAG	3 cut(s)	342, 1070, 1663
BseNI	ACTGG	2 cut(s)	615, 699
BseRI	GAGGAG	1 cut(s)	1635
BseXI	GCAGC	4 cut(s)	58, 1167, 1563, 1610
BsgI	GTGCAG	2 cut(s)	83, 1174
Bsh1236I	CGCG	1 cut(s)	128
BshFI	GGCC	1 cut(s)	737
BshNI	GGYRCC	1 cut(s)	1456
BsiHKCI	CYCGRG	1 cut(s)	428
BsiSI	CCGG	4 cut(s)	70, 429, 758, 1490
BslFI	GGGAC	2 cut(s)	451, 1143
BslI	CCNNNNNNNGG	2 cut(s)	171, 815
BsmAI	GTCTC	2 cut(s)	1006, 1059
BsmFI	GGGAC	2 cut(s)	451, 1143
BsmI	GAATGC	1 cut(s)	203
BsnI	GGCC	1 cut(s)	737
BsoBI	CYCGRG	1 cut(s)	428
Bsp119I	TTCGAA	1 cut(s)	1073
Bsp1407I	TGTACA	2 cut(s)	831, 1290
Bsp143I	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
Bsp1720I	GCTNAGC	1 cut(s)	729
BspACI	CCGC	4 cut(s)	128, 131, 1487, 1510
BspANI	GGCC	1 cut(s)	737
BspCNI	CTCAG	3 cut(s)	343, 1069, 1662
BspFNI	CGCG	1 cut(s)	128
BspHI	TCATGA	2 cut(s)	691, 1270
BspLI	GGNNCC	4 cut(s)	434, 738, 1131, 1458
BspPI	GGATC	1 cut(s)	1524
BspQI	GCTCTTC	1 cut(s)	380
BspT104I	TTCGAA	1 cut(s)	1073
BspT107I	GGYRCC	1 cut(s)	1456
BsrDI	GCAATG	1 cut(s)	1189
BsrFI	RCCGGY	1 cut(s)	69
BsrGI	TGTACA	2 cut(s)	831, 1290
BsrI	ACTGG	2 cut(s)	615, 699
BssAI	RCCGGY	1 cut(s)	69
BssECI	CCNNGG	4 cut(s)	427, 428, 809, 1037
BssMI	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
BssT1I	CCWWGG	2 cut(s)	809, 1037
Bst2UI	CCWGG	3 cut(s)	890, 1160, 1266
Bst4CI	ACNGT	6 cut(s)	222, 284, 446, 465, 1426, 1544
Bst6I	CTCTTC	4 cut(s)	380, 843, 1037, 1512
BstAUI	TGTACA	2 cut(s)	831, 1290
BstBI	TTCGAA	1 cut(s)	1073
BstC8I	GCNNGC	4 cut(s)	44, 71, 735, 1379
BstDEI	CTNAG	6 cut(s)	351, 356, 729, 1056, 1638, 1649
BstENI	CCTNNNNNAGG	1 cut(s)	169
BstF5I	GGATG	1 cut(s)	1567
BstFNI	CGCG	1 cut(s)	128
BstKTI	GATC	9 cut(s)	54, 90, 141, 346, 644, 958, 1049, 1315, 1532
BstMAI	GTCTC	2 cut(s)	1006, 1059
BstMBI	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
BstMWI	GCNNNNNNNGC	6 cut(s)	70, 79, 156, 734, 1155, 1327
BstNI	CCWGG	3 cut(s)	890, 1160, 1266
BstSCI	CCNGG	5 cut(s)	427, 428, 888, 1158, 1264
BstUI	CGCG	1 cut(s)	128
BstV1I	GCAGC	4 cut(s)	58, 1167, 1563, 1610
BstV2I	GAAGAC	4 cut(s)	129, 277, 1392, 1622
BstX2I	RGATCY	2 cut(s)	343, 641
BstYI	RGATCY	2 cut(s)	343, 641
BsuI	GTATCC	1 cut(s)	1563
BsuRI	GGCC	1 cut(s)	737
BtsCI	GGATG	1 cut(s)	1567
BtsI	GCAGTG	2 cut(s)	71, 216
BtsIMutI	CAGTG	4 cut(s)	71, 216, 608, 1056
Cac8I	GCNNGC	4 cut(s)	44, 71, 735, 1379
CciI	TCATGA	2 cut(s)	691, 1270
Cfr10I	RCCGGY	1 cut(s)	69
Cfr13I	GGNCC	3 cut(s)	736, 892, 1130
Cfr9I	CCCGGG	1 cut(s)	428
CseI	GACGC	1 cut(s)	134
Csp6I	GTAC	3 cut(s)	832, 1291, 1457
CspCI	CAANNNNNGTGG	2 cut(s)	1230, 1265
CviAII	CATG	8 cut(s)	692, 965, 975, 1146, 1170, 1271, 1562, 1609
CviQI	GTAC	3 cut(s)	832, 1291, 1457
DdeI	CTNAG	6 cut(s)	351, 356, 729, 1056, 1638, 1649
DpnI	GATC	9 cut(s)	53, 89, 140, 345, 643, 957, 1048, 1314, 1531
DpnII	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
Eam1104I	CTCTTC	4 cut(s)	380, 843, 1037, 1512
EarI	CTCTTC	4 cut(s)	380, 843, 1037, 1512
EciI	GGCGGA	1 cut(s)	146
Eco130I	CCWWGG	2 cut(s)	809, 1037
Eco47I	GGWCC	2 cut(s)	892, 1130
Eco57I	CTGAAG	4 cut(s)	104, 705, 816, 1453
Eco88I	CYCGRG	1 cut(s)	428
EcoNI	CCTNNNNNAGG	1 cut(s)	169
EcoO109I	RGGNCCY	1 cut(s)	1130
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	3 cut(s)	888, 1158, 1264
EcoT14I	CCWWGG	2 cut(s)	809, 1037
EcoT22I	ATGCAT	1 cut(s)	203
ErhI	CCWWGG	2 cut(s)	809, 1037
FaeI	CATG	8 cut(s)	695, 968, 978, 1149, 1173, 1274, 1565, 1612
FalI	AAGNNNNNCTT	2 cut(s)	1614, 1646
FaqI	GGGAC	2 cut(s)	451, 1143
FatI	CATG	8 cut(s)	691, 964, 974, 1145, 1169, 1270, 1561, 1608
FbaI	TGATCA	3 cut(s)	51, 138, 1312
Fnu4HI	GCNGC	6 cut(s)	47, 129, 1156, 1487, 1577, 1599
FokI	GGATG	1 cut(s)	1554
Fsp4HI	GCNGC	6 cut(s)	47, 129, 1156, 1487, 1577, 1599
FspBI	CTAG	5 cut(s)	333, 918, 1107, 1245, 1431
GluI	GCNGC	6 cut(s)	47, 129, 1156, 1487, 1577, 1599
HaeIII	GGCC	1 cut(s)	737
HapII	CCGG	4 cut(s)	70, 429, 758, 1490
HgaI	GACGC	1 cut(s)	134
Hin1II	CATG	8 cut(s)	695, 968, 978, 1149, 1173, 1274, 1565, 1612
HincII	GTYRAC	1 cut(s)	1501
HindII	GTYRAC	1 cut(s)	1501
HindIII	AAGCTT	2 cut(s)	30, 1379
HinfI	GANTC	8 cut(s)	614, 695, 752, 803, 937, 999, 1361, 1497
HpaII	CCGG	4 cut(s)	70, 429, 758, 1490
HphI	GGTGA	2 cut(s)	245, 1307
Hpy166II	GTNNAC	6 cut(s)	442, 599, 832, 970, 1291, 1501
Hpy188III	TCNNGA	9 cut(s)	91, 142, 416, 692, 941, 996, 1058, 1271, 1618
Hpy8I	GTNNAC	6 cut(s)	442, 599, 832, 970, 1291, 1501
HpyAV	CCTTC	6 cut(s)	149, 175, 260, 574, 662, 1069
HpyCH4III	ACNGT	6 cut(s)	222, 284, 446, 465, 1426, 1544
HpyCH4IV	ACGT	2 cut(s)	385, 1627
HpyF10VI	GCNNNNNNNGC	6 cut(s)	70, 79, 156, 734, 1155, 1327
HpyF3I	CTNAG	6 cut(s)	351, 356, 729, 1056, 1638, 1649
HpySE526I	ACGT	2 cut(s)	385, 1627
Hsp92II	CATG	8 cut(s)	695, 968, 978, 1149, 1173, 1274, 1565, 1612
KpnI	GGTACC	1 cut(s)	1460
KroI	GCCGGC	1 cut(s)	69
KroNI	GCCGGC	1 cut(s)	71
Ksp22I	TGATCA	3 cut(s)	51, 138, 1312
Kzo9I	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
LguI	GCTCTTC	1 cut(s)	380
LmnI	GCTCC	1 cut(s)	133
Lsp1109I	GCAGC	4 cut(s)	58, 1167, 1563, 1610
LweI	GCATC	2 cut(s)	540, 1123
MaeI	CTAG	5 cut(s)	333, 918, 1107, 1245, 1431
MaeII	ACGT	2 cut(s)	385, 1627
MaeIII	GTNAC	4 cut(s)	478, 1097, 1426, 1477
MalI	GATC	9 cut(s)	53, 89, 140, 345, 643, 957, 1048, 1314, 1531
MboI	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
MfeI	CAATTG	1 cut(s)	113
MflI	RGATCY	2 cut(s)	343, 641
MlyI	GAGTC	3 cut(s)	746, 1008, 1506
MmeI	TCCRAC	3 cut(s)	204, 1238, 1445
Mph1103I	ATGCAT	1 cut(s)	203
MroNI	GCCGGC	1 cut(s)	69
MroXI	GAANNNNTTC	6 cut(s)	31, 687, 852, 1089, 1521, 1629
MslI	CAYNNNNRTG	1 cut(s)	1150
MspA1I	CMGCKG	1 cut(s)	49
MspI	CCGG	4 cut(s)	70, 429, 758, 1490
MspR9I	CCNGG	5 cut(s)	429, 430, 890, 1160, 1266
MunI	CAATTG	1 cut(s)	113
Mva1269I	GAATGC	1 cut(s)	203
MvaI	CCWGG	3 cut(s)	890, 1160, 1266
MvnI	CGCG	1 cut(s)	128
MwoI	GCNNNNNNNGC	6 cut(s)	70, 79, 156, 734, 1155, 1327
NaeI	GCCGGC	1 cut(s)	71
NciI	CCSGG	2 cut(s)	429, 430
NdeII	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
NgoMIV	GCCGGC	1 cut(s)	69
NlaIII	CATG	8 cut(s)	695, 968, 978, 1149, 1173, 1274, 1565, 1612
NlaIV	GGNNCC	4 cut(s)	434, 738, 1131, 1458
NmuCI	GTSAC	2 cut(s)	1426, 1477
NsiI	ATGCAT	1 cut(s)	203
NspV	TTCGAA	1 cut(s)	1073
PagI	TCATGA	2 cut(s)	691, 1270
PciSI	GCTCTTC	1 cut(s)	380
PctI	GAATGC	1 cut(s)	203
PdiI	GCCGGC	1 cut(s)	71
PdmI	GAANNNNTTC	6 cut(s)	31, 687, 852, 1089, 1521, 1629
PfeI	GAWTC	5 cut(s)	614, 695, 803, 937, 1361
PflMI	CCANNNNNTGG	1 cut(s)	815
PkrI	GCNGC	6 cut(s)	48, 130, 1157, 1488, 1578, 1600
PleI	GAGTC	3 cut(s)	746, 1007, 1505
PpsI	GAGTC	3 cut(s)	746, 1007, 1505
PpuMI	RGGWCCY	1 cut(s)	1130
Psp1406I	AACGTT	1 cut(s)	385
Psp5II	RGGWCCY	1 cut(s)	1130
Psp6I	CCWGG	3 cut(s)	888, 1158, 1264
PspGI	CCWGG	3 cut(s)	888, 1158, 1264
PspN4I	GGNNCC	4 cut(s)	434, 738, 1131, 1458
PspPI	GGNCC	3 cut(s)	736, 892, 1130
PspPPI	RGGWCCY	1 cut(s)	1130
PsuI	RGATCY	2 cut(s)	343, 641
PvuII	CAGCTG	1 cut(s)	49
RsaI	GTAC	3 cut(s)	833, 1292, 1458
RsaNI	GTAC	3 cut(s)	832, 1291, 1457
RseI	CAYNNNNRTG	1 cut(s)	1150
SapI	GCTCTTC	1 cut(s)	380
SatI	GCNGC	6 cut(s)	47, 129, 1156, 1487, 1577, 1599
Sau3AI	GATC	9 cut(s)	51, 87, 138, 343, 641, 955, 1046, 1312, 1529
Sau96I	GGNCC	3 cut(s)	736, 892, 1130
SchI	GAGTC	3 cut(s)	746, 1008, 1506
ScrFI	CCNGG	5 cut(s)	429, 430, 890, 1160, 1266
SfaNI	GCATC	2 cut(s)	540, 1123
SfuI	TTCGAA	1 cut(s)	1073
SinI	GGWCC	2 cut(s)	892, 1130
SmaI	CCCGGG	1 cut(s)	430
SmiMI	CAYNNNNRTG	1 cut(s)	1150
SmlI	CTYRAG	2 cut(s)	74, 1616
SmoI	CTYRAG	2 cut(s)	74, 1616
SpeI	ACTAGT	1 cut(s)	1430
SsiI	CCGC	4 cut(s)	128, 131, 1487, 1510
SspI	AATATT	1 cut(s)	1089
SspMI	CTAG	5 cut(s)	333, 918, 1107, 1245, 1431
StyD4I	CCNGG	5 cut(s)	427, 428, 888, 1158, 1264
StyI	CCWWGG	2 cut(s)	809, 1037
TaaI	ACNGT	6 cut(s)	222, 284, 446, 465, 1426, 1544
TaiI	ACGT	2 cut(s)	388, 1630
TaqI	TCGA	4 cut(s)	555, 666, 1073, 1200
TatI	WGTACW	2 cut(s)	831, 1290
TauI	GCSGC	2 cut(s)	131, 1489
TfiI	GAWTC	5 cut(s)	614, 695, 803, 937, 1361
TscAI	CASTG	4 cut(s)	71, 216, 615, 1056
TseFI	GTSAC	2 cut(s)	1426, 1477
TseI	GCWGC	4 cut(s)	46, 1155, 1576, 1598
Tsp45I	GTSAC	2 cut(s)	1426, 1477
TspMI	CCCGGG	1 cut(s)	428
TspRI	CASTG	4 cut(s)	71, 216, 615, 1056
Van91I	CCANNNNNTGG	1 cut(s)	815
VpaK11BI	GGWCC	2 cut(s)	892, 1130
XagI	CCTNNNNNAGG	1 cut(s)	169
XapI	RAATTY	5 cut(s)	239, 654, 985, 1202, 1604
XmaI	CCCGGG	1 cut(s)	428
XmnI	GAANNNNTTC	6 cut(s)	31, 687, 852, 1089, 1521, 1629
XspI	CTAG	5 cut(s)	333, 918, 1107, 1245, 1431
Zsp2I	ATGCAT	1 cut(s)	203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.