Pectinesterase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19150 AT2G19150 AT2G47280 AT5G26810 |
| fragaria_vesca | FvH4_1g18321 FvH4_1g18330 FvH4_6g07550 FvH4_6g15430 |
| malus_domestica | MD02G1190500.v1.1 MD12G1205100.v1.1 |
| prunus_persica | Prupe.6G215500_v2.0.a1 Prupe.6G215600_v2.0.a1 Prupe.6G215800_v2.0.a1 Prupe.6G312200_v2.0.a1 |
| pyrus_communis | pycom12g19280 |
| rosa_chinensis | RchiOBHm_Chr2g0109001 RchiOBHm_Chr2g0109011 RchiOBHm_Chr3g0457241 |
| rosa_laevigata | RLG00000017700 RLG00000017701 RLG00000025240 RLG00000025241 |
| rosa_multiflora | Rmu_sc0028579.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00134630 Rroxscaffold_2G00134660 Rroxscaffold_6G00422080 Rroxscaffold_6G00422090 |
| rosa_rugosa | Rorug02G0156700 Rorug02G0156800 Rorug02G0156900 Rorug02G0156900 Rorug03G0019600 |
| rosa_samantha | Rh2AG207500 Rh2AG207600 Rh2BG218800 Rh2BG218900 Rh2CG210700 Rh2CG210800 Rh2DG213800 Rh2DG213900 Rh3AG079400 Rh3BG081100 Rh3CG081400 Rh3DG083100 |
| rosa_wichuraiana | Rw0G010980 Rw2G016480 Rw3G006840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 692 |
| AarI | CACCTGC | 1 cut(s) | 340 |
| Acc36I | ACCTGC | 1 cut(s) | 340 |
| AccB1I | GGYRCC | 1 cut(s) | 328 |
| AciI | CCGC | 2 cut(s) | 180, 711 |
| AcoI | YGGCCR | 1 cut(s) | 475 |
| AcsI | RAATTY | 2 cut(s) | 25, 274 |
| AfaI | GTAC | 1 cut(s) | 531 |
| AgsI | TTSAA | 7 cut(s) | 158, 229, 271, 342, 446, 592, 654 |
| AhlI | ACTAGT | 1 cut(s) | 575 |
| AjnI | CCWGG | 2 cut(s) | 532, 769 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 307, 339 |
| AluBI | AGCT | 2 cut(s) | 338, 848 |
| AluI | AGCT | 2 cut(s) | 338, 848 |
| Alw26I | GTCTC | 1 cut(s) | 110 |
| AoxI | GGCC | 2 cut(s) | 475, 616 |
| ApeKI | GCWGC | 1 cut(s) | 335 |
| ApoI | RAATTY | 2 cut(s) | 25, 274 |
| AspLEI | GCGC | 1 cut(s) | 550 |
| AspS9I | GGNCC | 4 cut(s) | 302, 617, 708, 767 |
| AsuC2I | CCSGG | 1 cut(s) | 300 |
| AsuHPI | GGTGA | 1 cut(s) | 766 |
| AvaII | GGWCC | 3 cut(s) | 302, 708, 767 |
| BaeGI | GKGCMC | 1 cut(s) | 331 |
| BanI | GGYRCC | 1 cut(s) | 328 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 304, 336 |
| BbsI | GAAGAC | 1 cut(s) | 640 |
| BbvI | GCAGC | 1 cut(s) | 347 |
| BccI | CCATC | 3 cut(s) | 56, 795, 864 |
| BceAI | ACGGC | 1 cut(s) | 490 |
| BciT130I | CCWGG | 2 cut(s) | 534, 771 |
| BciVI | GTATCC | 2 cut(s) | 98, 803 |
| BcnI | CCSGG | 1 cut(s) | 300 |
| BcoDI | GTCTC | 1 cut(s) | 110 |
| BcuI | ACTAGT | 1 cut(s) | 575 |
| BfaI | CTAG | 2 cut(s) | 168, 576 |
| BfmI | CTRYAG | 2 cut(s) | 333, 453 |
| BfuAI | ACCTGC | 1 cut(s) | 340 |
| BfuI | GTATCC | 2 cut(s) | 98, 803 |
| BisI | GCNGC | 1 cut(s) | 336 |
| BlsI | GCNGC | 1 cut(s) | 337 |
| Bme1390I | CCNGG | 3 cut(s) | 300, 534, 771 |
| Bme18I | GGWCC | 3 cut(s) | 302, 708, 767 |
| BmgT120I | GGNCC | 4 cut(s) | 302, 617, 708, 767 |
| BmiI | GGNNCC | 2 cut(s) | 303, 330 |
| BmrFI | CCNGG | 3 cut(s) | 300, 534, 771 |
| BoxI | GACNNNNGTC | 1 cut(s) | 414 |
| BpiI | GAAGAC | 1 cut(s) | 640 |
| BpmI | CTGGAG | 2 cut(s) | 369, 792 |
| BpuMI | CCSGG | 1 cut(s) | 300 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaAI | YACGTR | 1 cut(s) | 604 |
| BsaI | GGTCTC | 1 cut(s) | 110 |
| BsaJI | CCNNGG | 2 cut(s) | 100, 797 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 794, 824 |
| Bse1I | ACTGG | 2 cut(s) | 499, 735 |
| BseBI | CCWGG | 2 cut(s) | 534, 771 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseDI | CCNNGG | 2 cut(s) | 100, 797 |
| BseGI | GGATG | 2 cut(s) | 412, 875 |
| BseMII | CTCAG | 1 cut(s) | 762 |
| BseNI | ACTGG | 2 cut(s) | 499, 735 |
| BseSI | GKGCMC | 1 cut(s) | 331 |
| BseXI | GCAGC | 1 cut(s) | 347 |
| BshFI | GGCC | 2 cut(s) | 477, 618 |
| BshNI | GGYRCC | 1 cut(s) | 328 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| BsiSI | CCGG | 1 cut(s) | 299 |
| BslFI | GGGAC | 1 cut(s) | 769 |
| BsmAI | GTCTC | 1 cut(s) | 110 |
| BsmFI | GGGAC | 1 cut(s) | 769 |
| BsnI | GGCC | 2 cut(s) | 477, 618 |
| Bso31I | GGTCTC | 1 cut(s) | 110 |
| Bsp1286I | GDGCHC | 1 cut(s) | 331 |
| Bsp143I | GATC | 3 cut(s) | 506, 725, 817 |
| Bsp19I | CCATGG | 1 cut(s) | 100 |
| BspACI | CCGC | 2 cut(s) | 180, 711 |
| BspANI | GGCC | 2 cut(s) | 477, 618 |
| BspCNI | CTCAG | 1 cut(s) | 761 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspLI | GGNNCC | 2 cut(s) | 303, 330 |
| BspMAI | CTGCAG | 1 cut(s) | 337 |
| BspMI | ACCTGC | 1 cut(s) | 340 |
| BspT107I | GGYRCC | 1 cut(s) | 328 |
| BspTNI | GGTCTC | 1 cut(s) | 110 |
| BsrI | ACTGG | 2 cut(s) | 499, 735 |
| BssECI | CCNNGG | 2 cut(s) | 100, 797 |
| BssMI | GATC | 3 cut(s) | 506, 725, 817 |
| BssT1I | CCWWGG | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 2 cut(s) | 534, 771 |
| Bst4CI | ACNGT | 4 cut(s) | 37, 63, 218, 287 |
| BstBAI | YACGTR | 1 cut(s) | 604 |
| BstDEI | CTNAG | 1 cut(s) | 748 |
| BstDSI | CCRYGG | 2 cut(s) | 100, 797 |
| BstF5I | GGATG | 2 cut(s) | 412, 875 |
| BstHHI | GCGC | 1 cut(s) | 550 |
| BstKTI | GATC | 3 cut(s) | 509, 728, 820 |
| BstMAI | GTCTC | 1 cut(s) | 110 |
| BstMBI | GATC | 3 cut(s) | 506, 725, 817 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 335 |
| BstNI | CCWGG | 2 cut(s) | 534, 771 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 414 |
| BstSCI | CCNGG | 3 cut(s) | 298, 532, 769 |
| BstSFI | CTRYAG | 2 cut(s) | 333, 453 |
| BstSLI | GKGCMC | 1 cut(s) | 331 |
| BstSNI | TACGTA | 1 cut(s) | 604 |
| BstV1I | GCAGC | 1 cut(s) | 347 |
| BstV2I | GAAGAC | 1 cut(s) | 640 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 679, 705 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| BsuI | GTATCC | 2 cut(s) | 98, 803 |
| BsuRI | GGCC | 2 cut(s) | 477, 618 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtgI | CCRYGG | 2 cut(s) | 100, 797 |
| BtsCI | GGATG | 2 cut(s) | 412, 875 |
| BtsI | GCAGTG | 1 cut(s) | 211 |
| BtsIMutI | CAGTG | 3 cut(s) | 42, 211, 728 |
| BveI | ACCTGC | 1 cut(s) | 340 |
| CfoI | GCGC | 1 cut(s) | 550 |
| Cfr13I | GGNCC | 4 cut(s) | 302, 617, 708, 767 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| CsiI | ACCWGGT | 1 cut(s) | 532 |
| Csp6I | GTAC | 1 cut(s) | 530 |
| CviAII | CATG | 4 cut(s) | 101, 112, 173, 714 |
| CviJI | RGCY | 7 cut(s) | 47, 338, 452, 477, 564, 618, 848 |
| CviKI_1 | RGCY | 7 cut(s) | 47, 338, 452, 477, 564, 618, 848 |
| CviQI | GTAC | 1 cut(s) | 530 |
| DdeI | CTNAG | 1 cut(s) | 748 |
| DpnI | GATC | 3 cut(s) | 508, 727, 819 |
| DpnII | GATC | 3 cut(s) | 506, 725, 817 |
| EaeI | YGGCCR | 1 cut(s) | 475 |
| Eco105I | TACGTA | 1 cut(s) | 604 |
| Eco130I | CCWWGG | 1 cut(s) | 100 |
| Eco31I | GGTCTC | 1 cut(s) | 110 |
| Eco47I | GGWCC | 3 cut(s) | 302, 708, 767 |
| EcoO109I | RGGNCCY | 2 cut(s) | 617, 767 |
| EcoRI | GAATTC | 1 cut(s) | 274 |
| EcoRII | CCWGG | 2 cut(s) | 532, 769 |
| EcoT14I | CCWWGG | 1 cut(s) | 100 |
| ErhI | CCWWGG | 1 cut(s) | 100 |
| FaeI | CATG | 4 cut(s) | 104, 115, 176, 717 |
| FaqI | GGGAC | 1 cut(s) | 769 |
| FatI | CATG | 4 cut(s) | 100, 111, 172, 713 |
| FauNDI | CATATG | 1 cut(s) | 280 |
| Fnu4HI | GCNGC | 1 cut(s) | 336 |
| FokI | GGATG | 2 cut(s) | 419, 882 |
| Fsp4HI | GCNGC | 1 cut(s) | 336 |
| FspBI | CTAG | 2 cut(s) | 168, 576 |
| GlaI | GCGC | 1 cut(s) | 549 |
| GluI | GCNGC | 1 cut(s) | 336 |
| GsuI | CTGGAG | 2 cut(s) | 369, 792 |
| HaeIII | GGCC | 2 cut(s) | 477, 618 |
| HapII | CCGG | 1 cut(s) | 299 |
| HhaI | GCGC | 1 cut(s) | 550 |
| Hin1II | CATG | 4 cut(s) | 104, 115, 176, 717 |
| Hin6I | GCGC | 1 cut(s) | 548 |
| HinP1I | GCGC | 1 cut(s) | 548 |
| HinfI | GANTC | 3 cut(s) | 53, 82, 127 |
| HpaII | CCGG | 1 cut(s) | 299 |
| HphI | GGTGA | 1 cut(s) | 766 |
| Hpy166II | GTNNAC | 2 cut(s) | 81, 530 |
| Hpy188I | TCNGA | 2 cut(s) | 751, 817 |
| Hpy188III | TCNNGA | 5 cut(s) | 155, 271, 348, 654, 821 |
| Hpy8I | GTNNAC | 2 cut(s) | 81, 530 |
| HpyAV | CCTTC | 3 cut(s) | 152, 440, 860 |
| HpyCH4III | ACNGT | 4 cut(s) | 37, 63, 218, 287 |
| HpyCH4IV | ACGT | 2 cut(s) | 411, 603 |
| HpyCH4V | TGCA | 5 cut(s) | 40, 239, 335, 391, 762 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 335 |
| HpyF3I | CTNAG | 1 cut(s) | 748 |
| HpySE526I | ACGT | 2 cut(s) | 411, 603 |
| Hsp92II | CATG | 4 cut(s) | 104, 115, 176, 717 |
| HspAI | GCGC | 1 cut(s) | 548 |
| Kzo9I | GATC | 3 cut(s) | 506, 725, 817 |
| LmnI | GCTCC | 1 cut(s) | 773 |
| Lsp1109I | GCAGC | 1 cut(s) | 347 |
| MabI | ACCWGGT | 1 cut(s) | 532 |
| MaeI | CTAG | 2 cut(s) | 168, 576 |
| MaeII | ACGT | 2 cut(s) | 411, 603 |
| MaeIII | GTNAC | 2 cut(s) | 419, 511 |
| MalI | GATC | 3 cut(s) | 508, 727, 819 |
| MboI | GATC | 3 cut(s) | 506, 725, 817 |
| MboII | GAAGA | 3 cut(s) | 324, 645, 817 |
| MhlI | GDGCHC | 1 cut(s) | 331 |
| MluCI | AATT | 7 cut(s) | 25, 244, 274, 342, 483, 757, 889 |
| MlyI | GAGTC | 1 cut(s) | 76 |
| MnlI | CCTC | 6 cut(s) | 14, 141, 396, 679, 694, 745 |
| MseI | TTAA | 6 cut(s) | 96, 503, 566, 737, 836, 892 |
| MslI | CAYNNNNRTG | 1 cut(s) | 677 |
| MspI | CCGG | 1 cut(s) | 299 |
| MspR9I | CCNGG | 3 cut(s) | 300, 534, 771 |
| MvaI | CCWGG | 2 cut(s) | 534, 771 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 335 |
| NciI | CCSGG | 1 cut(s) | 300 |
| NcoI | CCATGG | 1 cut(s) | 100 |
| NdeI | CATATG | 1 cut(s) | 280 |
| NdeII | GATC | 3 cut(s) | 506, 725, 817 |
| NlaIII | CATG | 4 cut(s) | 104, 115, 176, 717 |
| NlaIV | GGNNCC | 2 cut(s) | 303, 330 |
| NmuCI | GTSAC | 1 cut(s) | 419 |
| PaqCI | CACCTGC | 1 cut(s) | 340 |
| PfeI | GAWTC | 2 cut(s) | 53, 127 |
| PfoI | TCCNGGA | 1 cut(s) | 769 |
| PkrI | GCNGC | 1 cut(s) | 337 |
| PleI | GAGTC | 1 cut(s) | 76 |
| PpsI | GAGTC | 1 cut(s) | 76 |
| Ppu21I | YACGTR | 1 cut(s) | 604 |
| PpuMI | RGGWCCY | 1 cut(s) | 767 |
| PshAI | GACNNNNGTC | 1 cut(s) | 414 |
| PsiI | TTATAA | 1 cut(s) | 692 |
| Psp5II | RGGWCCY | 1 cut(s) | 767 |
| Psp6I | CCWGG | 2 cut(s) | 532, 769 |
| PspGI | CCWGG | 2 cut(s) | 532, 769 |
| PspN4I | GGNNCC | 2 cut(s) | 303, 330 |
| PspPI | GGNCC | 4 cut(s) | 302, 617, 708, 767 |
| PspPPI | RGGWCCY | 1 cut(s) | 767 |
| PstI | CTGCAG | 1 cut(s) | 337 |
| RsaI | GTAC | 1 cut(s) | 531 |
| RsaNI | GTAC | 1 cut(s) | 530 |
| RseI | CAYNNNNRTG | 1 cut(s) | 677 |
| SaqAI | TTAA | 6 cut(s) | 96, 503, 566, 737, 836, 892 |
| SatI | GCNGC | 1 cut(s) | 336 |
| Sau3AI | GATC | 3 cut(s) | 506, 725, 817 |
| Sau96I | GGNCC | 4 cut(s) | 302, 617, 708, 767 |
| SchI | GAGTC | 1 cut(s) | 76 |
| ScrFI | CCNGG | 3 cut(s) | 300, 534, 771 |
| SduI | GDGCHC | 1 cut(s) | 331 |
| SetI | ASST | 9 cut(s) | 334, 340, 414, 529, 535, 606, 756, 769, 850 |
| SexAI | ACCWGGT | 1 cut(s) | 532 |
| SfcI | CTRYAG | 2 cut(s) | 333, 453 |
| SinI | GGWCC | 3 cut(s) | 302, 708, 767 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 677 |
| SnaBI | TACGTA | 1 cut(s) | 604 |
| SpeI | ACTAGT | 1 cut(s) | 575 |
| Sse9I | AATT | 7 cut(s) | 25, 244, 274, 342, 483, 757, 889 |
| SsiI | CCGC | 2 cut(s) | 180, 711 |
| SspI | AATATT | 2 cut(s) | 267, 688 |
| SspMI | CTAG | 2 cut(s) | 168, 576 |
| StyD4I | CCNGG | 3 cut(s) | 298, 532, 769 |
| StyI | CCWWGG | 1 cut(s) | 100 |
| TaaI | ACNGT | 4 cut(s) | 37, 63, 218, 287 |
| TaiI | ACGT | 2 cut(s) | 414, 606 |
| TaqI | TCGA | 5 cut(s) | 6, 19, 51, 133, 186 |
| TasI | AATT | 7 cut(s) | 25, 244, 274, 342, 483, 757, 889 |
| TfiI | GAWTC | 2 cut(s) | 53, 127 |
| Tru1I | TTAA | 6 cut(s) | 96, 503, 566, 737, 836, 892 |
| Tru9I | TTAA | 6 cut(s) | 96, 503, 566, 737, 836, 892 |
| TscAI | CASTG | 3 cut(s) | 42, 211, 735 |
| TseFI | GTSAC | 1 cut(s) | 419 |
| TseI | GCWGC | 1 cut(s) | 335 |
| Tsp45I | GTSAC | 1 cut(s) | 419 |
| TspDTI | ATGAA | 4 cut(s) | 267, 370, 451, 844 |
| TspGWI | ACGGA | 1 cut(s) | 271 |
| TspRI | CASTG | 3 cut(s) | 42, 211, 735 |
| VpaK11BI | GGWCC | 3 cut(s) | 302, 708, 767 |
| XapI | RAATTY | 2 cut(s) | 25, 274 |
| XspI | CTAG | 2 cut(s) | 168, 576 |