Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002120

Physical Location & Seq

Genomic Coordinates Forward (+)

21875748 .. 21877484

Gene Structure 1737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G264700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGGACACAACCAACGAGGAAGAAACAGTGCCCGAGTCCGGATCGGACTGGGCCGAGTTGACCCAGGAGTGCCTGATCAACATACTGGGTCGGGTCAGCCTGGAGCAGCGCTGGCGTGGGGCGATGCTGGTCTGCAAGTCATGGCTGCAGGCGTGCAAGGAGCCTTGCCTCAACTCCGCCTTCGACCTCCAGCCTCACTTCGAGTCCGCTCGCTGGTGGACCCCGGAGTTCGAGAGAAAGGTTGATTCCATTCTCCAATCTGTCGTTGATTGGAGCGCTGGCTCGCTTCGACACATTCGTACCACCCACTGCTCTAATCACTCTCTCTCTTTCGTCGCTCAAAGGTGCCCGAACCTCGAGGTTCTTTCAATCAAGTGCTGCCCGAATGTAACTGATTCATCCATGGCTGACATAGCTTTTCGGTGCCCCATGATCCTGGAACTTGACATCAGCTATTGCCATGAAATATCTCATGAGTCTCTGGTGTTGATTGGAAGGAATTGCCCAAATCTCAAAATCTTGAAAAGGAATTTAATGAATTGGTTAGATCCTTCCGAGCACACTGGGGTAGTTCCTGACGAGTACTTAAAAACTTGCCCTCAGGATGGAAATTCAGAAGCTGCTGCAATTGGCAAATCTATGCCCAATTTGGAGCACCTTGAACTTCGGTTCTCCAAGGTATCGGCTAAAGGGTTTGCTTTGATATCTGTAGGATGTCCAAATCTTGAGTATTTGGATTTGTTTGGGTGTGTAAACTTGACCAGTCGCGATATTGAGAATGCAACATCTAATCTGAAGAATTTGAAGGAGATTAAAAAGCCAAATTTTTACATCCCCAGGTCAGTGTTCCATACAGAGAGGTATGGCCATTGGAGGCTGTATGACGAGAGATTCCAGACAGATGTTTTCAGAATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0005575 GO:0005622 GO:0005623 GO:0019005 GO:0031461 GO:0032991 GO:0044424 GO:0044464 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like LRR_6

Protein Analysis

306

Amino Acids

34.9

Weight (kDa)

5.72

Isoelectric Point (pI)

47.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002120)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30640 AT5G57900
fragaria_vesca	FvH4_1g00760 FvH4_5g27030 FvH4_5g27040
malus_domestica	MD02G1006200.v1.1 MD15G1151100.v1.1 MD15G1151200.v1.1
prunus_persica	Prupe.7G264700_v2.0.a1
pyrus_communis	pycom02g00510
rosa_chinensis	RchiOBHm_Chr2g0085481 RchiOBHm_Chr6g0300051
rosa_laevigata	RLG00000001865 RLG00000007816 RLG00000008610 RLG00000008650 RLG00000014167 RLG00000015002 RLG00000015694 RLG00000018338 RLG00000033648
rosa_multiflora	Rmu_sc0000338.1_g000005 Rmu_sc0000543.1_g000045 Rmu_sc0000689.1_g000007 Rmu_sc0007908.1_g000009
rosa_roxburghii	Rroxscaffold_2G00092530 Rroxscaffold_2G00109180 Rroxscaffold_2G00155350
rosa_rugosa	Rorug01G0460700 Rorug05G0551200
rosa_samantha	Rh1AG261800 Rh1BG259100 Rh2AG009000 Rh2BG010300 Rh2CG010800 Rh2DG011500 Rh3DG119500 Rh4AG166900 Rh4BG384000 Rh5AG445400 Rh5CG438700 Rh5DG458200
rosa_wichuraiana	Rw2G000860 Rw3G009680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	356
AccB1I	GGYRCC	2 cut(s)	345, 423
AccBSI	CCGCTC	1 cut(s)	209
AccII	CGCG	1 cut(s)	768
AccIII	TCCGGA	1 cut(s)	38
AciI	CCGC	2 cut(s)	177, 207
AclWI	GGATC	3 cut(s)	49, 427, 542
AcoI	YGGCCR	1 cut(s)	865
AcsI	RAATTY	4 cut(s)	529, 610, 799, 823
AcuI	CTGAAG	1 cut(s)	815
AfaI	GTAC	2 cut(s)	301, 584
AfeI	AGCGCT	2 cut(s)	110, 277
AfiI	CCNNNNNNNGG	3 cut(s)	38, 213, 605
AgsI	TTSAA	4 cut(s)	369, 523, 662, 805
AjnI	CCWGG	4 cut(s)	63, 99, 435, 836
AluBI	AGCT	3 cut(s)	416, 453, 620
AluI	AGCT	3 cut(s)	416, 453, 620
Alw21I	GWGCWC	2 cut(s)	561, 657
Alw26I	GTCTC	1 cut(s)	483
AlwI	GGATC	3 cut(s)	49, 427, 542
AlwNI	CAGNNNCTG	1 cut(s)	620
Ama87I	CYCGRG	2 cut(s)	32, 356
Aor13HI	TCCGGA	1 cut(s)	38
Aor51HI	AGCGCT	2 cut(s)	110, 277
AoxI	GGCC	2 cut(s)	51, 865
ApeKI	GCWGC	5 cut(s)	106, 145, 378, 620, 623
ApoI	RAATTY	4 cut(s)	529, 610, 799, 823
AspLEI	GCGC	2 cut(s)	111, 278
AspS9I	GGNCC	2 cut(s)	51, 219
AsuC2I	CCSGG	1 cut(s)	224
AvaI	CYCGRG	2 cut(s)	32, 356
AvaII	GGWCC	1 cut(s)	219
AxyI	CCTNAGG	1 cut(s)	600
BaeGI	GKGCMC	3 cut(s)	33, 350, 428
BaeI	ACNNNNGTAYC	2 cut(s)	283, 316
BalI	TGGCCA	1 cut(s)	867
BanI	GGYRCC	2 cut(s)	345, 423
Bbv12I	GWGCWC	2 cut(s)	561, 657
BbvI	GCAGC	5 cut(s)	118, 132, 365, 607, 610
BccI	CCATC	1 cut(s)	599
BciT130I	CCWGG	4 cut(s)	65, 101, 437, 838
BclI	TGATCA	1 cut(s)	75
BcnI	CCSGG	1 cut(s)	224
BcoDI	GTCTC	1 cut(s)	483
BfmI	CTRYAG	2 cut(s)	146, 708
BfoI	RGCGCY	2 cut(s)	112, 279
BisI	GCNGC	5 cut(s)	107, 146, 379, 621, 624
BlsI	GCNGC	5 cut(s)	108, 147, 380, 622, 625
BmcAI	AGTACT	1 cut(s)	584
Bme1390I	CCNGG	5 cut(s)	65, 101, 224, 437, 838
Bme18I	GGWCC	1 cut(s)	219
BmeT110I	CYCGRG	2 cut(s)	32, 356
BmgT120I	GGNCC	2 cut(s)	51, 219
BmiI	GGNNCC	4 cut(s)	162, 221, 347, 425
BmrFI	CCNGG	5 cut(s)	65, 101, 224, 437, 838
BmrI	ACTGGG	3 cut(s)	58, 95, 573
BmsI	GCATC	1 cut(s)	114
BmuI	ACTGGG	3 cut(s)	58, 95, 573
BpmI	CTGGAG	2 cut(s)	122, 173
BpuEI	CTTGAG	1 cut(s)	746
BpuMI	CCSGG	1 cut(s)	224
BsaJI	CCNNGG	5 cut(s)	63, 222, 402, 675, 836
BsaWI	WCCGGW	1 cut(s)	38
Bsc4I	CCNNNNNNNGG	3 cut(s)	38, 213, 605
Bse1I	ACTGG	4 cut(s)	53, 90, 568, 762
Bse21I	CCTNAGG	1 cut(s)	600
BseAI	TCCGGA	1 cut(s)	38
BseBI	CCWGG	4 cut(s)	65, 101, 437, 838
BseDI	CCNNGG	5 cut(s)	63, 222, 402, 675, 836
BseGI	GGATG	4 cut(s)	398, 610, 719, 831
BseLI	CCNNNNNNNGG	3 cut(s)	38, 213, 605
BseMII	CTCAG	1 cut(s)	614
BseNI	ACTGG	4 cut(s)	53, 90, 568, 762
BseSI	GKGCMC	3 cut(s)	33, 350, 428
BseXI	GCAGC	5 cut(s)	118, 132, 365, 607, 610
Bsh1236I	CGCG	1 cut(s)	768
BshFI	GGCC	2 cut(s)	53, 867
BshNI	GGYRCC	2 cut(s)	345, 423
BsiHKAI	GWGCWC	2 cut(s)	561, 657
BsiHKCI	CYCGRG	2 cut(s)	32, 356
BsiSI	CCGG	2 cut(s)	39, 224
BslI	CCNNNNNNNGG	3 cut(s)	38, 213, 605
BsmAI	GTCTC	1 cut(s)	483
BsmI	GAATGC	1 cut(s)	784
BsnI	GGCC	2 cut(s)	53, 867
BsoBI	CYCGRG	2 cut(s)	32, 356
Bsp1286I	GDGCHC	5 cut(s)	33, 350, 428, 561, 657
Bsp13I	TCCGGA	1 cut(s)	38
Bsp143I	GATC	4 cut(s)	41, 75, 432, 547
Bsp19I	CCATGG	1 cut(s)	402
Bsp68I	TCGCGA	1 cut(s)	768
BspACI	CCGC	2 cut(s)	177, 207
BspANI	GGCC	2 cut(s)	53, 867
BspCNI	CTCAG	1 cut(s)	613
BspEI	TCCGGA	1 cut(s)	38
BspFNI	CGCG	1 cut(s)	768
BspHI	TCATGA	1 cut(s)	472
BspLI	GGNNCC	4 cut(s)	162, 221, 347, 425
BspMAI	CTGCAG	1 cut(s)	150
BspPI	GGATC	3 cut(s)	49, 427, 542
BspT107I	GGYRCC	2 cut(s)	345, 423
BsrBI	CCGCTC	1 cut(s)	209
BsrI	ACTGG	4 cut(s)	53, 90, 568, 762
BssECI	CCNNGG	5 cut(s)	63, 222, 402, 675, 836
BssMI	GATC	4 cut(s)	41, 75, 432, 547
BssT1I	CCWWGG	2 cut(s)	402, 675
Bst2UI	CCWGG	4 cut(s)	65, 101, 437, 838
Bst4CI	ACNGT	1 cut(s)	28
BstC8I	GCNNGC	6 cut(s)	113, 150, 154, 211, 280, 284
BstDEI	CTNAG	1 cut(s)	600
BstDSI	CCRYGG	1 cut(s)	402
BstF5I	GGATG	4 cut(s)	398, 610, 719, 831
BstFNI	CGCG	1 cut(s)	768
BstH2I	RGCGCY	2 cut(s)	112, 279
BstHHI	GCGC	2 cut(s)	111, 278
BstKTI	GATC	4 cut(s)	44, 78, 435, 550
BstMAI	GTCTC	1 cut(s)	483
BstMBI	GATC	4 cut(s)	41, 75, 432, 547
BstMWI	GCNNNNNNNGC	2 cut(s)	112, 413
BstNI	CCWGG	4 cut(s)	65, 101, 437, 838
BstSCI	CCNGG	5 cut(s)	63, 99, 222, 435, 836
BstSFI	CTRYAG	2 cut(s)	146, 708
BstSLI	GKGCMC	3 cut(s)	33, 350, 428
BstUI	CGCG	1 cut(s)	768
BstV1I	GCAGC	5 cut(s)	118, 132, 365, 607, 610
BstX2I	RGATCY	1 cut(s)	547
BstXI	CCANNNNNNTGG	1 cut(s)	436
BstYI	RGATCY	1 cut(s)	547
Bsu36I	CCTNAGG	1 cut(s)	600
BsuRI	GGCC	2 cut(s)	53, 867
BtgI	CCRYGG	1 cut(s)	402
BtgZI	GCGATG	1 cut(s)	137
BtsCI	GGATG	4 cut(s)	398, 610, 719, 831
BtsI	GCAGTG	1 cut(s)	307
BtsIMutI	CAGTG	4 cut(s)	33, 307, 561, 849
BtuMI	TCGCGA	1 cut(s)	768
Cac8I	GCNNGC	6 cut(s)	113, 150, 154, 211, 280, 284
CaiI	CAGNNNCTG	1 cut(s)	620
CciI	TCATGA	1 cut(s)	472
CfoI	GCGC	2 cut(s)	111, 278
Cfr13I	GGNCC	2 cut(s)	51, 219
Csp6I	GTAC	2 cut(s)	300, 583
CviAII	CATG	5 cut(s)	141, 403, 430, 461, 473
CviQI	GTAC	2 cut(s)	300, 583
DdeI	CTNAG	1 cut(s)	600
DpnI	GATC	4 cut(s)	43, 77, 434, 549
DpnII	GATC	4 cut(s)	41, 75, 432, 547
EaeI	YGGCCR	1 cut(s)	865
EciI	GGCGGA	1 cut(s)	166
Eco130I	CCWWGG	2 cut(s)	402, 675
Eco32I	GATATC	1 cut(s)	705
Eco47I	GGWCC	1 cut(s)	219
Eco47III	AGCGCT	2 cut(s)	110, 277
Eco57I	CTGAAG	1 cut(s)	815
Eco81I	CCTNAGG	1 cut(s)	600
Eco88I	CYCGRG	2 cut(s)	32, 356
EcoRII	CCWGG	4 cut(s)	63, 99, 435, 836
EcoRV	GATATC	1 cut(s)	705
EcoT14I	CCWWGG	2 cut(s)	402, 675
ErhI	CCWWGG	2 cut(s)	402, 675
FaeI	CATG	5 cut(s)	144, 406, 433, 464, 476
FatI	CATG	5 cut(s)	140, 402, 429, 460, 472
FbaI	TGATCA	1 cut(s)	75
Fnu4HI	GCNGC	5 cut(s)	107, 146, 379, 621, 624
FokI	GGATG	4 cut(s)	385, 617, 726, 818
Fsp4HI	GCNGC	5 cut(s)	107, 146, 379, 621, 624
GlaI	GCGC	2 cut(s)	110, 277
GluI	GCNGC	5 cut(s)	107, 146, 379, 621, 624
GsuI	CTGGAG	2 cut(s)	122, 173
HaeII	RGCGCY	2 cut(s)	112, 279
HaeIII	GGCC	2 cut(s)	53, 867
HapII	CCGG	2 cut(s)	39, 224
HhaI	GCGC	2 cut(s)	111, 278
Hin1II	CATG	5 cut(s)	144, 406, 433, 464, 476
Hin6I	GCGC	2 cut(s)	109, 276
HinP1I	GCGC	2 cut(s)	109, 276
HincII	GTYRAC	1 cut(s)	60
HindII	GTYRAC	1 cut(s)	60
HinfI	GANTC	7 cut(s)	35, 203, 245, 395, 476, 891, 912
HpaII	CCGG	2 cut(s)	39, 224
Hpy166II	GTNNAC	3 cut(s)	60, 219, 754
Hpy188I	TCNGA	5 cut(s)	46, 556, 616, 795, 911
Hpy188III	TCNNGA	9 cut(s)	39, 232, 473, 520, 575, 602, 725, 767, 895
Hpy8I	GTNNAC	3 cut(s)	60, 219, 754
Hpy99I	CGWCG	1 cut(s)	338
HpyAV	CCTTC	4 cut(s)	190, 489, 561, 799
HpyCH4III	ACNGT	1 cut(s)	28
HpyCH4V	TGCA	5 cut(s)	135, 148, 156, 626, 782
HpyF10VI	GCNNNNNNNGC	2 cut(s)	112, 413
HpyF3I	CTNAG	1 cut(s)	600
Hsp92II	CATG	5 cut(s)	144, 406, 433, 464, 476
HspAI	GCGC	2 cut(s)	109, 276
Kpn2I	TCCGGA	1 cut(s)	38
Ksp22I	TGATCA	1 cut(s)	75
Kzo9I	GATC	4 cut(s)	41, 75, 432, 547
LmnI	GCTCC	4 cut(s)	103, 160, 273, 652
Lsp1109I	GCAGC	5 cut(s)	118, 132, 365, 607, 610
LweI	GCATC	1 cut(s)	114
MaeIII	GTNAC	1 cut(s)	388
MalI	GATC	4 cut(s)	43, 77, 434, 549
MbiI	CCGCTC	1 cut(s)	209
MboI	GATC	4 cut(s)	41, 75, 432, 547
MboII	GAAGA	2 cut(s)	32, 808
MfeI	CAATTG	1 cut(s)	627
MflI	RGATCY	1 cut(s)	547
MhlI	GDGCHC	5 cut(s)	33, 350, 428, 561, 657
MlsI	TGGCCA	1 cut(s)	867
MluCI	AATT	8 cut(s)	499, 529, 538, 610, 627, 646, 799, 823
MluNI	TGGCCA	1 cut(s)	867
MlyI	GAGTC	3 cut(s)	44, 212, 485
MnlI	CCTC	9 cut(s)	10, 179, 197, 204, 352, 365, 609, 852, 867
Mox20I	TGGCCA	1 cut(s)	867
MroI	TCCGGA	1 cut(s)	38
MscI	TGGCCA	1 cut(s)	867
MseI	TTAA	3 cut(s)	533, 587, 813
Msp20I	TGGCCA	1 cut(s)	867
MspI	CCGG	2 cut(s)	39, 224
MspR9I	CCNGG	5 cut(s)	65, 101, 224, 437, 838
MunI	CAATTG	1 cut(s)	627
Mva1269I	GAATGC	1 cut(s)	784
MvaI	CCWGG	4 cut(s)	65, 101, 437, 838
MvnI	CGCG	1 cut(s)	768
MwoI	GCNNNNNNNGC	2 cut(s)	112, 413
NciI	CCSGG	1 cut(s)	224
NcoI	CCATGG	1 cut(s)	402
NdeII	GATC	4 cut(s)	41, 75, 432, 547
NlaIII	CATG	5 cut(s)	144, 406, 433, 464, 476
NlaIV	GGNNCC	4 cut(s)	162, 221, 347, 425
NmeAIII	GCCGAG	1 cut(s)	79
NruI	TCGCGA	1 cut(s)	768
PaeR7I	CTCGAG	1 cut(s)	356
PagI	TCATGA	1 cut(s)	472
PcsI	WCGNNNNNNNCGW	1 cut(s)	295
PctI	GAATGC	1 cut(s)	784
PfeI	GAWTC	4 cut(s)	245, 395, 891, 912
PfoI	TCCNGGA	1 cut(s)	435
PkrI	GCNGC	5 cut(s)	108, 147, 380, 622, 625
PleI	GAGTC	3 cut(s)	43, 211, 484
PpsI	GAGTC	3 cut(s)	43, 211, 484
Psp6I	CCWGG	4 cut(s)	63, 99, 435, 836
PspGI	CCWGG	4 cut(s)	63, 99, 435, 836
PspN4I	GGNNCC	4 cut(s)	162, 221, 347, 425
PspPI	GGNCC	2 cut(s)	51, 219
PspXI	VCTCGAGB	1 cut(s)	356
PstI	CTGCAG	1 cut(s)	150
PstNI	CAGNNNCTG	1 cut(s)	620
PsuI	RGATCY	1 cut(s)	547
RruI	TCGCGA	1 cut(s)	768
RsaI	GTAC	2 cut(s)	301, 584
RsaNI	GTAC	2 cut(s)	300, 583
SaqAI	TTAA	3 cut(s)	533, 587, 813
SatI	GCNGC	5 cut(s)	107, 146, 379, 621, 624
Sau3AI	GATC	4 cut(s)	41, 75, 432, 547
Sau96I	GGNCC	2 cut(s)	51, 219
ScaI	AGTACT	1 cut(s)	584
SchI	GAGTC	3 cut(s)	44, 212, 485
ScrFI	CCNGG	5 cut(s)	65, 101, 224, 437, 838
SduI	GDGCHC	5 cut(s)	33, 350, 428, 561, 657
SfaNI	GCATC	1 cut(s)	114
SfcI	CTRYAG	2 cut(s)	146, 708
Sfr274I	CTCGAG	1 cut(s)	356
SinI	GGWCC	1 cut(s)	219
SlaI	CTCGAG	1 cut(s)	356
SmlI	CTYRAG	2 cut(s)	356, 725
SmoI	CTYRAG	2 cut(s)	356, 725
Sse9I	AATT	8 cut(s)	499, 529, 538, 610, 627, 646, 799, 823
SsiI	CCGC	2 cut(s)	177, 207
StyD4I	CCNGG	5 cut(s)	63, 99, 222, 435, 836
StyI	CCWWGG	2 cut(s)	402, 675
TaaI	ACNGT	1 cut(s)	28
TaqI	TCGA	5 cut(s)	183, 201, 231, 289, 357
TasI	AATT	8 cut(s)	499, 529, 538, 610, 627, 646, 799, 823
TatI	WGTACW	1 cut(s)	582
TfiI	GAWTC	4 cut(s)	245, 395, 891, 912
Tru1I	TTAA	3 cut(s)	533, 587, 813
Tru9I	TTAA	3 cut(s)	533, 587, 813
TscAI	CASTG	4 cut(s)	33, 314, 568, 849
TseI	GCWGC	5 cut(s)	106, 145, 378, 620, 623
TspDTI	ATGAA	3 cut(s)	387, 477, 551
TspRI	CASTG	4 cut(s)	33, 314, 568, 849
VpaK11BI	GGWCC	1 cut(s)	219
XapI	RAATTY	4 cut(s)	529, 610, 799, 823
XhoI	CTCGAG	1 cut(s)	356
ZrmI	AGTACT	1 cut(s)	584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.