TMV resistance protein N-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20142 |
| fragaria_vesca | FvH4_5g10730 FvH4_5g10730 FvH4_5g10730 FvH4_5g10730 FvH4_5g10730 |
| malus_domestica | MD05G1140000.v1.1 |
| prunus_persica | Prupe.1G120200_v2.0.a1 |
| pyrus_communis | pycom03g08420 pycom04g02910 pycom10g12010 pycom10g12080 pycom10g12100 |
| rosa_chinensis | RchiOBHm_Chr3g0451631 RchiOBHm_Chr5g0026391 RchiOBHm_Chr7g0241711 |
| rosa_laevigata | RLG00000004786 RLG00000004787 RLG00000029480 |
| rosa_multiflora | Rmu_co8097864.1_g000001 Rmu_sc0001689.1_g000015 Rmu_sc0002354.1_g000038 Rmu_sc0003469.1_g000013 Rmu_sc0006326.1_g000044 Rmu_sc0038436.1_g000001 Rmu_sc0043107.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00053220 Rroxscaffold_3G00218740 Rroxscaffold_3G00267480 Rroxscaffold_4G00317010 Rroxscaffold_6G00397670 Rroxscaffold_6G00397680 |
| rosa_rugosa | Rorug01G0112600 Rorug05G0000700 Rorug06G0259600 Rorug07G0346700 |
| rosa_samantha | Rh7AG085700 |
| rosa_wichuraiana | Rw1G011340 Rw7G007550 Rw7G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 355 |
| AccII | CGCG | 1 cut(s) | 539 |
| AciI | CCGC | 3 cut(s) | 250, 539, 543 |
| AcoI | YGGCCR | 1 cut(s) | 540 |
| AcuI | CTGAAG | 2 cut(s) | 272, 308 |
| AdeI | CACNNNGTG | 1 cut(s) | 423 |
| AfaI | GTAC | 1 cut(s) | 516 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 204, 205, 358 |
| AgsI | TTSAA | 6 cut(s) | 185, 302, 560, 571, 613, 648 |
| AjiI | CACGTC | 1 cut(s) | 203 |
| AluBI | AGCT | 2 cut(s) | 188, 436 |
| AluI | AGCT | 2 cut(s) | 188, 436 |
| Alw21I | GWGCWC | 2 cut(s) | 120, 594 |
| Alw44I | GTGCAC | 1 cut(s) | 590 |
| AoxI | GGCC | 1 cut(s) | 540 |
| ApaLI | GTGCAC | 1 cut(s) | 590 |
| ApeKI | GCWGC | 3 cut(s) | 155, 278, 620 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 336, 368 |
| AsuII | TTCGAA | 1 cut(s) | 355 |
| BaeGI | GKGCMC | 1 cut(s) | 594 |
| BbsI | GAAGAC | 1 cut(s) | 620 |
| Bbv12I | GWGCWC | 2 cut(s) | 120, 594 |
| BbvI | GCAGC | 3 cut(s) | 142, 265, 632 |
| BceAI | ACGGC | 1 cut(s) | 237 |
| BfmI | CTRYAG | 1 cut(s) | 618 |
| BfuAI | ACCTGC | 1 cut(s) | 355 |
| BisI | GCNGC | 5 cut(s) | 156, 279, 540, 543, 621 |
| BlsI | GCNGC | 5 cut(s) | 157, 280, 541, 544, 622 |
| BmgBI | CACGTC | 1 cut(s) | 203 |
| BpiI | GAAGAC | 1 cut(s) | 620 |
| BpmI | CTGGAG | 1 cut(s) | 180 |
| Bpu14I | TTCGAA | 1 cut(s) | 355 |
| BsaJI | CCNNGG | 1 cut(s) | 253 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 204, 205, 358 |
| BseDI | CCNNGG | 1 cut(s) | 253 |
| BseGI | GGATG | 7 cut(s) | 15, 51, 57, 63, 69, 99, 436 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 204, 205, 358 |
| BseMII | CTCAG | 1 cut(s) | 133 |
| BseSI | GKGCMC | 1 cut(s) | 594 |
| BseX3I | CGGCCG | 1 cut(s) | 540 |
| BseXI | GCAGC | 3 cut(s) | 142, 265, 632 |
| Bsh1236I | CGCG | 1 cut(s) | 539 |
| Bsh1285I | CGRYCG | 1 cut(s) | 543 |
| BshFI | GGCC | 1 cut(s) | 542 |
| BsiEI | CGRYCG | 1 cut(s) | 543 |
| BsiHKAI | GWGCWC | 2 cut(s) | 120, 594 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 204, 205, 358 |
| BsmI | GAATGC | 2 cut(s) | 379, 458 |
| BsnI | GGCC | 1 cut(s) | 542 |
| Bsp119I | TTCGAA | 1 cut(s) | 355 |
| Bsp1286I | GDGCHC | 2 cut(s) | 120, 594 |
| Bsp143I | GATC | 1 cut(s) | 625 |
| BspACI | CCGC | 3 cut(s) | 250, 539, 543 |
| BspANI | GGCC | 1 cut(s) | 542 |
| BspCNI | CTCAG | 1 cut(s) | 132 |
| BspFNI | CGCG | 1 cut(s) | 539 |
| BspMAI | CTGCAG | 1 cut(s) | 622 |
| BspMI | ACCTGC | 1 cut(s) | 355 |
| BspT104I | TTCGAA | 1 cut(s) | 355 |
| BssECI | CCNNGG | 1 cut(s) | 253 |
| BssMI | GATC | 1 cut(s) | 625 |
| Bst4CI | ACNGT | 1 cut(s) | 578 |
| BstBI | TTCGAA | 1 cut(s) | 355 |
| BstC8I | GCNNGC | 1 cut(s) | 606 |
| BstDEI | CTNAG | 1 cut(s) | 119 |
| BstDSI | CCRYGG | 1 cut(s) | 253 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 356 |
| BstF5I | GGATG | 7 cut(s) | 15, 51, 57, 63, 69, 99, 436 |
| BstFNI | CGCG | 1 cut(s) | 539 |
| BstKTI | GATC | 1 cut(s) | 628 |
| BstMBI | GATC | 1 cut(s) | 625 |
| BstMCI | CGRYCG | 1 cut(s) | 543 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 548 |
| BstSFI | CTRYAG | 1 cut(s) | 618 |
| BstSLI | GKGCMC | 1 cut(s) | 594 |
| BstUI | CGCG | 1 cut(s) | 539 |
| BstV1I | GCAGC | 3 cut(s) | 142, 265, 632 |
| BstV2I | GAAGAC | 1 cut(s) | 620 |
| BstZI | CGGCCG | 1 cut(s) | 540 |
| BsuRI | GGCC | 1 cut(s) | 542 |
| BtgI | CCRYGG | 1 cut(s) | 253 |
| BtrI | CACGTC | 1 cut(s) | 203 |
| BtsCI | GGATG | 7 cut(s) | 15, 51, 57, 63, 69, 99, 436 |
| BveI | ACCTGC | 1 cut(s) | 355 |
| Cac8I | GCNNGC | 1 cut(s) | 606 |
| CciNI | GCGGCCGC | 1 cut(s) | 540 |
| Csp6I | GTAC | 1 cut(s) | 515 |
| CviAII | CATG | 3 cut(s) | 275, 420, 656 |
| CviJI | RGCY | 5 cut(s) | 188, 267, 436, 542, 623 |
| CviKI_1 | RGCY | 5 cut(s) | 188, 267, 436, 542, 623 |
| CviQI | GTAC | 1 cut(s) | 515 |
| DdeI | CTNAG | 1 cut(s) | 119 |
| DpnI | GATC | 1 cut(s) | 627 |
| DpnII | GATC | 1 cut(s) | 625 |
| DraIII | CACNNNGTG | 1 cut(s) | 423 |
| EaeI | YGGCCR | 1 cut(s) | 540 |
| EagI | CGGCCG | 1 cut(s) | 540 |
| EclXI | CGGCCG | 1 cut(s) | 540 |
| Eco52I | CGGCCG | 1 cut(s) | 540 |
| Eco57I | CTGAAG | 2 cut(s) | 272, 308 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 356 |
| FaeI | CATG | 3 cut(s) | 278, 423, 659 |
| FatI | CATG | 3 cut(s) | 274, 419, 655 |
| FauI | CCCGC | 1 cut(s) | 257 |
| Fnu4HI | GCNGC | 5 cut(s) | 156, 279, 540, 543, 621 |
| FokI | GGATG | 7 cut(s) | 22, 58, 64, 70, 76, 106, 443 |
| Fsp4HI | GCNGC | 5 cut(s) | 156, 279, 540, 543, 621 |
| GluI | GCNGC | 5 cut(s) | 156, 279, 540, 543, 621 |
| GsuI | CTGGAG | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 542 |
| Hin1II | CATG | 3 cut(s) | 278, 423, 659 |
| HincII | GTYRAC | 1 cut(s) | 129 |
| HindII | GTYRAC | 1 cut(s) | 129 |
| HpaI | GTTAAC | 1 cut(s) | 129 |
| Hpy166II | GTNNAC | 2 cut(s) | 129, 592 |
| Hpy188I | TCNGA | 7 cut(s) | 122, 236, 291, 327, 344, 474, 511 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 367 |
| Hpy8I | GTNNAC | 2 cut(s) | 129, 592 |
| Hpy99I | CGWCG | 1 cut(s) | 207 |
| HpyAV | CCTTC | 2 cut(s) | 362, 469 |
| HpyCH4III | ACNGT | 1 cut(s) | 578 |
| HpyCH4IV | ACGT | 1 cut(s) | 202 |
| HpyCH4V | TGCA | 3 cut(s) | 442, 592, 620 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 548 |
| HpyF3I | CTNAG | 1 cut(s) | 119 |
| HpySE526I | ACGT | 1 cut(s) | 202 |
| Hsp92II | CATG | 3 cut(s) | 278, 423, 659 |
| KspAI | GTTAAC | 1 cut(s) | 129 |
| Kzo9I | GATC | 1 cut(s) | 625 |
| LpnPI | CCDG | 4 cut(s) | 144, 277, 360, 618 |
| Lsp1109I | GCAGC | 3 cut(s) | 142, 265, 632 |
| MaeII | ACGT | 1 cut(s) | 202 |
| MaeIII | GTNAC | 1 cut(s) | 533 |
| MalI | GATC | 1 cut(s) | 627 |
| MboI | GATC | 1 cut(s) | 625 |
| MboII | GAAGA | 5 cut(s) | 129, 263, 304, 405, 625 |
| MhlI | GDGCHC | 2 cut(s) | 120, 594 |
| MluCI | AATT | 1 cut(s) | 297 |
| MnlI | CCTC | 4 cut(s) | 154, 230, 235, 594 |
| MseI | TTAA | 1 cut(s) | 128 |
| MslI | CAYNNNNRTG | 1 cut(s) | 273 |
| Mva1269I | GAATGC | 2 cut(s) | 379, 458 |
| MvnI | CGCG | 1 cut(s) | 539 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 548 |
| NdeII | GATC | 1 cut(s) | 625 |
| NlaIII | CATG | 3 cut(s) | 278, 423, 659 |
| NotI | GCGGCCGC | 1 cut(s) | 540 |
| NspV | TTCGAA | 1 cut(s) | 355 |
| PctI | GAATGC | 2 cut(s) | 379, 458 |
| PkrI | GCNGC | 5 cut(s) | 157, 280, 541, 544, 622 |
| PstI | CTGCAG | 1 cut(s) | 622 |
| RsaI | GTAC | 1 cut(s) | 516 |
| RsaNI | GTAC | 1 cut(s) | 515 |
| RseI | CAYNNNNRTG | 1 cut(s) | 273 |
| SaqAI | TTAA | 1 cut(s) | 128 |
| SatI | GCNGC | 5 cut(s) | 156, 279, 540, 543, 621 |
| Sau3AI | GATC | 1 cut(s) | 625 |
| SduI | GDGCHC | 2 cut(s) | 120, 594 |
| SetI | ASST | 8 cut(s) | 190, 205, 241, 308, 349, 438, 480, 591 |
| SfcI | CTRYAG | 1 cut(s) | 618 |
| SfuI | TTCGAA | 1 cut(s) | 355 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 273 |
| Sse9I | AATT | 1 cut(s) | 297 |
| SsiI | CCGC | 3 cut(s) | 250, 539, 543 |
| TaaI | ACNGT | 1 cut(s) | 578 |
| TaiI | ACGT | 1 cut(s) | 205 |
| TaqI | TCGA | 3 cut(s) | 355, 366, 450 |
| TasI | AATT | 1 cut(s) | 297 |
| TauI | GCSGC | 2 cut(s) | 542, 545 |
| Tru1I | TTAA | 1 cut(s) | 128 |
| Tru9I | TTAA | 1 cut(s) | 128 |
| TseI | GCWGC | 3 cut(s) | 155, 278, 620 |
| TspDTI | ATGAA | 1 cut(s) | 263 |
| VneI | GTGCAC | 1 cut(s) | 590 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 356 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 424 |