Toll - interleukin 1 - resistance
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20142 |
| fragaria_vesca | FvH4_5g10730 FvH4_5g10730 FvH4_5g10730 FvH4_5g10730 FvH4_5g10730 |
| malus_domestica | MD05G1140000.v1.1 |
| prunus_persica | Prupe.1G120200_v2.0.a1 |
| pyrus_communis | pycom03g08420 pycom04g02910 pycom10g12010 pycom10g12080 pycom10g12100 |
| rosa_chinensis | RchiOBHm_Chr3g0451631 RchiOBHm_Chr5g0026391 RchiOBHm_Chr7g0241711 |
| rosa_laevigata | RLG00000004786 RLG00000004787 RLG00000029480 |
| rosa_multiflora | Rmu_co8097864.1_g000001 Rmu_sc0001689.1_g000015 Rmu_sc0002354.1_g000038 Rmu_sc0003469.1_g000013 Rmu_sc0006326.1_g000044 Rmu_sc0038436.1_g000001 Rmu_sc0043107.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00053220 Rroxscaffold_3G00218740 Rroxscaffold_3G00267480 Rroxscaffold_4G00317010 Rroxscaffold_6G00397670 Rroxscaffold_6G00397680 |
| rosa_rugosa | Rorug01G0112600 Rorug05G0000700 Rorug06G0259600 Rorug07G0346700 |
| rosa_samantha | Rh7AG085700 |
| rosa_wichuraiana | Rw1G011340 Rw7G007550 Rw7G042350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 150 |
| AciI | CCGC | 2 cut(s) | 148, 246 |
| AcoI | YGGCCR | 1 cut(s) | 367 |
| AdeI | CACNNNGTG | 1 cut(s) | 321 |
| AfaI | GTAC | 1 cut(s) | 381 |
| AgeI | ACCGGT | 1 cut(s) | 521 |
| AgsI | TTSAA | 4 cut(s) | 332, 458, 469, 546 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 491, 523 |
| AluBI | AGCT | 1 cut(s) | 503 |
| AluI | AGCT | 1 cut(s) | 503 |
| Alw26I | GTCTC | 1 cut(s) | 225 |
| AoxI | GGCC | 1 cut(s) | 367 |
| ApeKI | GCWGC | 5 cut(s) | 6, 50, 59, 176, 503 |
| AsiGI | ACCGGT | 1 cut(s) | 521 |
| AspS9I | GGNCC | 2 cut(s) | 242, 472 |
| AsuHPI | GGTGA | 2 cut(s) | 295, 499 |
| AvaII | GGWCC | 2 cut(s) | 242, 472 |
| BalI | TGGCCA | 1 cut(s) | 369 |
| BbsI | GAAGAC | 1 cut(s) | 303 |
| BbvI | GCAGC | 4 cut(s) | 37, 46, 163, 490 |
| BccI | CCATC | 3 cut(s) | 174, 367, 412 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 178, 212 |
| BclI | TGATCA | 1 cut(s) | 285 |
| BcoDI | GTCTC | 1 cut(s) | 225 |
| BfmI | CTRYAG | 2 cut(s) | 7, 214 |
| BisI | GCNGC | 5 cut(s) | 7, 51, 60, 177, 504 |
| BlsI | GCNGC | 5 cut(s) | 8, 52, 61, 178, 505 |
| Bme18I | GGWCC | 2 cut(s) | 242, 472 |
| BmgT120I | GGNCC | 2 cut(s) | 242, 472 |
| BmiI | GGNNCC | 1 cut(s) | 244 |
| BmsI | GCATC | 2 cut(s) | 46, 430 |
| BoxI | GACNNNNGTC | 1 cut(s) | 399 |
| BpiI | GAAGAC | 1 cut(s) | 303 |
| BpmI | CTGGAG | 1 cut(s) | 242 |
| BsaWI | WCCGGW | 1 cut(s) | 521 |
| Bse118I | RCCGGY | 1 cut(s) | 521 |
| Bse1I | ACTGG | 1 cut(s) | 399 |
| BseNI | ACTGG | 1 cut(s) | 399 |
| BseRI | GAGGAG | 1 cut(s) | 243 |
| BseXI | GCAGC | 4 cut(s) | 37, 46, 163, 490 |
| Bsh1236I | CGCG | 1 cut(s) | 150 |
| BshFI | GGCC | 1 cut(s) | 369 |
| BshTI | ACCGGT | 1 cut(s) | 521 |
| BsiSI | CCGG | 1 cut(s) | 522 |
| BsmAI | GTCTC | 1 cut(s) | 225 |
| BsmBI | CGTCTC | 1 cut(s) | 225 |
| BsnI | GGCC | 1 cut(s) | 369 |
| Bsp143I | GATC | 3 cut(s) | 11, 285, 489 |
| BspACI | CCGC | 2 cut(s) | 148, 246 |
| BspANI | GGCC | 1 cut(s) | 369 |
| BspFNI | CGCG | 1 cut(s) | 150 |
| BspLI | GGNNCC | 1 cut(s) | 244 |
| BspMAI | CTGCAG | 1 cut(s) | 11 |
| BsrFI | RCCGGY | 1 cut(s) | 521 |
| BsrI | ACTGG | 1 cut(s) | 399 |
| BssAI | RCCGGY | 1 cut(s) | 521 |
| BssMI | GATC | 3 cut(s) | 11, 285, 489 |
| Bst4CI | ACNGT | 1 cut(s) | 476 |
| BstFNI | CGCG | 1 cut(s) | 150 |
| BstKTI | GATC | 3 cut(s) | 14, 288, 492 |
| BstMAI | GTCTC | 1 cut(s) | 225 |
| BstMBI | GATC | 3 cut(s) | 11, 285, 489 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 56, 59, 274 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 399 |
| BstSFI | CTRYAG | 2 cut(s) | 7, 214 |
| BstUI | CGCG | 1 cut(s) | 150 |
| BstV1I | GCAGC | 4 cut(s) | 37, 46, 163, 490 |
| BstV2I | GAAGAC | 1 cut(s) | 303 |
| BsuRI | GGCC | 1 cut(s) | 369 |
| Cfr10I | RCCGGY | 1 cut(s) | 521 |
| Cfr13I | GGNCC | 2 cut(s) | 242, 472 |
| CseI | GACGC | 1 cut(s) | 297 |
| Csp6I | GTAC | 1 cut(s) | 380 |
| CspAI | ACCGGT | 1 cut(s) | 521 |
| CviAII | CATG | 3 cut(s) | 173, 208, 318 |
| CviJI | RGCY | 5 cut(s) | 165, 220, 277, 369, 503 |
| CviKI_1 | RGCY | 5 cut(s) | 165, 220, 277, 369, 503 |
| CviQI | GTAC | 1 cut(s) | 380 |
| DpnI | GATC | 3 cut(s) | 13, 287, 491 |
| DpnII | GATC | 3 cut(s) | 11, 285, 489 |
| DraIII | CACNNNGTG | 1 cut(s) | 321 |
| EaeI | YGGCCR | 1 cut(s) | 367 |
| Eco32I | GATATC | 1 cut(s) | 91 |
| Eco47I | GGWCC | 2 cut(s) | 242, 472 |
| EcoRV | GATATC | 1 cut(s) | 91 |
| EcoT22I | ATGCAT | 1 cut(s) | 445 |
| Esp3I | CGTCTC | 1 cut(s) | 225 |
| FaeI | CATG | 3 cut(s) | 176, 211, 321 |
| FaiI | YATR | 9 cut(s) | 114, 174, 209, 306, 319, 342, 344, 435, 479 |
| FatI | CATG | 3 cut(s) | 172, 207, 317 |
| FauI | CCCGC | 2 cut(s) | 155, 253 |
| FbaI | TGATCA | 1 cut(s) | 285 |
| Fnu4HI | GCNGC | 5 cut(s) | 7, 51, 60, 177, 504 |
| Fsp4HI | GCNGC | 5 cut(s) | 7, 51, 60, 177, 504 |
| GluI | GCNGC | 5 cut(s) | 7, 51, 60, 177, 504 |
| GsuI | CTGGAG | 1 cut(s) | 242 |
| HaeIII | GGCC | 1 cut(s) | 369 |
| HapII | CCGG | 1 cut(s) | 522 |
| HgaI | GACGC | 1 cut(s) | 297 |
| Hin1II | CATG | 3 cut(s) | 176, 211, 321 |
| HpaII | CCGG | 1 cut(s) | 522 |
| HphI | GGTGA | 2 cut(s) | 295, 499 |
| Hpy188I | TCNGA | 2 cut(s) | 134, 409 |
| Hpy188III | TCNNGA | 1 cut(s) | 104 |
| HpyCH4III | ACNGT | 1 cut(s) | 476 |
| HpyCH4V | TGCA | 5 cut(s) | 9, 340, 354, 437, 443 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 56, 59, 274 |
| Hsp92II | CATG | 3 cut(s) | 176, 211, 321 |
| Ksp22I | TGATCA | 1 cut(s) | 285 |
| Kzo9I | GATC | 3 cut(s) | 11, 285, 489 |
| LpnPI | CCDG | 8 cut(s) | 30, 175, 202, 206, 383, 412, 516, 535 |
| Lsp1109I | GCAGC | 4 cut(s) | 37, 46, 163, 490 |
| LweI | GCATC | 2 cut(s) | 46, 430 |
| MalI | GATC | 3 cut(s) | 13, 287, 491 |
| MboI | GATC | 3 cut(s) | 11, 285, 489 |
| MboII | GAAGA | 5 cut(s) | 18, 30, 33, 161, 303 |
| MlsI | TGGCCA | 1 cut(s) | 369 |
| MluCI | AATT | 1 cut(s) | 237 |
| MluNI | TGGCCA | 1 cut(s) | 369 |
| MnlI | CCTC | 5 cut(s) | 40, 128, 133, 221, 418 |
| Mox20I | TGGCCA | 1 cut(s) | 369 |
| Mph1103I | ATGCAT | 1 cut(s) | 445 |
| MscI | TGGCCA | 1 cut(s) | 369 |
| MslI | CAYNNNNRTG | 1 cut(s) | 171 |
| Msp20I | TGGCCA | 1 cut(s) | 369 |
| MspI | CCGG | 1 cut(s) | 522 |
| MvnI | CGCG | 1 cut(s) | 150 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 56, 59, 274 |
| NdeII | GATC | 3 cut(s) | 11, 285, 489 |
| NlaIII | CATG | 3 cut(s) | 176, 211, 321 |
| NlaIV | GGNNCC | 1 cut(s) | 244 |
| NsiI | ATGCAT | 1 cut(s) | 445 |
| PinAI | ACCGGT | 1 cut(s) | 521 |
| PkrI | GCNGC | 5 cut(s) | 8, 52, 61, 178, 505 |
| PshAI | GACNNNNGTC | 1 cut(s) | 399 |
| PspN4I | GGNNCC | 1 cut(s) | 244 |
| PspPI | GGNCC | 2 cut(s) | 242, 472 |
| PstI | CTGCAG | 1 cut(s) | 11 |
| RsaI | GTAC | 1 cut(s) | 381 |
| RsaNI | GTAC | 1 cut(s) | 380 |
| RseI | CAYNNNNRTG | 1 cut(s) | 171 |
| SatI | GCNGC | 5 cut(s) | 7, 51, 60, 177, 504 |
| Sau3AI | GATC | 3 cut(s) | 11, 285, 489 |
| Sau96I | GGNCC | 2 cut(s) | 242, 472 |
| SetI | ASST | 3 cut(s) | 206, 489, 505 |
| SfaNI | GCATC | 2 cut(s) | 46, 430 |
| SfcI | CTRYAG | 2 cut(s) | 7, 214 |
| SinI | GGWCC | 2 cut(s) | 242, 472 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 171 |
| Sse9I | AATT | 1 cut(s) | 237 |
| SsiI | CCGC | 2 cut(s) | 148, 246 |
| TaaI | ACNGT | 1 cut(s) | 476 |
| TaqI | TCGA | 4 cut(s) | 32, 103, 198, 492 |
| TasI | AATT | 1 cut(s) | 237 |
| TseI | GCWGC | 5 cut(s) | 6, 50, 59, 176, 503 |
| TspDTI | ATGAA | 1 cut(s) | 161 |
| VpaK11BI | GGWCC | 2 cut(s) | 242, 472 |
| Zsp2I | ATGCAT | 1 cut(s) | 445 |