pycom07g02510

Glutamate-cysteine ligase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
2060066 .. 2061180
1115 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g02510.1

Sequence Viewer

Length: 204 bp
ATGCCCAAGCAAGTTTTTTTAAATTACATGCCCAAAGTCGGCTCACGAGGAATTGATTCAATGTTCAGGACTTGTAGTGTACAGGTTAATCTCGACTTCAGTTCGGAAACAGATATGATAAGGAAACTCCGTGCTAGTCTTGCTTTGCAGCCTCCCTACCTAGCACGAGGCCTTTTGGGAGCTCACTGGCTTCGGGTTCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004357 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006750 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009403 GO:0009404 GO:0009408 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009700 GO:0009719 GO:0009725 GO:0009753 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010193 GO:0016043 GO:0016143 GO:0016144 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019184 GO:0019438 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0022414 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0033554 GO:0034641 GO:0042221 GO:0042398 GO:0042430 GO:0042435 GO:0042493 GO:0042545 GO:0042742 GO:0043043 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045087 GO:0045229 GO:0046217 GO:0046483 GO:0046677 GO:0046686 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0061458 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0090567 GO:0098542 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
Pfam Domains
Protein Families

Protein Analysis

68

Amino Acids

7.61

Weight (kDa)

10.17

Isoelectric Point (pI)

51.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GCS2 PF04107 6 - 55 1.5e-10 Glutamate-cysteine ligase family 2(GCS2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 82
AfaI GTAC 1 cut(s) 81
AfiI CCNNNNNNNGG 1 cut(s) 38
AgsI TTSAA 1 cut(s) 60
AluBI AGCT 1 cut(s) 182
AluI AGCT 1 cut(s) 182
Alw21I GWGCWC 1 cut(s) 184
AoxI GGCC 1 cut(s) 169
ApeKI GCWGC 1 cut(s) 148
Asp700I GAANNNNTTC 1 cut(s) 55
BanII GRGCYC 1 cut(s) 184
BauI CACGAG 2 cut(s) 45, 165
Bbv12I GWGCWC 1 cut(s) 184
BbvI GCAGC 1 cut(s) 160
BfaI CTAG 2 cut(s) 135, 161
BisI GCNGC 1 cut(s) 149
BlsI GCNGC 1 cut(s) 150
BmiI GGNNCC 1 cut(s) 198
Bsc4I CCNNNNNNNGG 1 cut(s) 38
Bse1I ACTGG 1 cut(s) 191
BseLI CCNNNNNNNGG 1 cut(s) 38
BseNI ACTGG 1 cut(s) 191
BseXI GCAGC 1 cut(s) 160
BshFI GGCC 1 cut(s) 171
BsiHKAI GWGCWC 1 cut(s) 184
BslI CCNNNNNNNGG 1 cut(s) 38
BsnI GGCC 1 cut(s) 171
Bsp1286I GDGCHC 1 cut(s) 184
Bsp1407I TGTACA 1 cut(s) 79
BspANI GGCC 1 cut(s) 171
BspLI GGNNCC 1 cut(s) 198
BsrGI TGTACA 1 cut(s) 79
BsrI ACTGG 1 cut(s) 191
BssSI CACGAG 2 cut(s) 45, 165
Bst2BI CACGAG 2 cut(s) 45, 165
BstAUI TGTACA 1 cut(s) 79
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstNSI RCATGY 1 cut(s) 31
BstV1I GCAGC 1 cut(s) 160
BsuRI GGCC 1 cut(s) 171
BtsIMutI CAGTG 1 cut(s) 184
Csp6I GTAC 1 cut(s) 80
CviAII CATG 1 cut(s) 28
CviJI RGCY 5 cut(s) 42, 151, 171, 182, 190
CviKI_1 RGCY 5 cut(s) 42, 151, 171, 182, 190
CviQI GTAC 1 cut(s) 80
DraI TTTAAA 1 cut(s) 21
Ecl136II GAGCTC 1 cut(s) 182
Eco147I AGGCCT 1 cut(s) 171
Eco24I GRGCYC 1 cut(s) 184
Eco53kI GAGCTC 1 cut(s) 182
Eco57I CTGAAG 1 cut(s) 82
EcoICRI GAGCTC 1 cut(s) 182
EcoT38I GRGCYC 1 cut(s) 184
FaeI CATG 1 cut(s) 31
FaiI YATR 2 cut(s) 29, 116
FatI CATG 1 cut(s) 27
Fnu4HI GCNGC 1 cut(s) 149
FriOI GRGCYC 1 cut(s) 184
Fsp4HI GCNGC 1 cut(s) 149
FspBI CTAG 2 cut(s) 135, 161
GluI GCNGC 1 cut(s) 149
HaeIII GGCC 1 cut(s) 171
Hin1II CATG 1 cut(s) 31
HinfI GANTC 1 cut(s) 56
Hpy166II GTNNAC 1 cut(s) 80
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 3 cut(s) 45, 67, 92
Hpy8I GTNNAC 1 cut(s) 80
HpyCH4V TGCA 1 cut(s) 148
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
Hsp92II CATG 1 cut(s) 31
LmnI GCTCC 1 cut(s) 179
LpnPI CCDG 3 cut(s) 52, 68, 172
Lsp1109I GCAGC 1 cut(s) 160
MaeI CTAG 2 cut(s) 135, 161
MhlI GDGCHC 1 cut(s) 184
MluCI AATT 2 cut(s) 22, 51
MnlI CCTC 3 cut(s) 41, 161, 162
MroXI GAANNNNTTC 1 cut(s) 55
MseI TTAA 2 cut(s) 20, 87
MwoI GCNNNNNNNGC 1 cut(s) 140
NlaIII CATG 1 cut(s) 31
NlaIV GGNNCC 1 cut(s) 198
NspI RCATGY 1 cut(s) 31
PceI AGGCCT 1 cut(s) 171
PdmI GAANNNNTTC 1 cut(s) 55
PfeI GAWTC 1 cut(s) 56
PkrI GCNGC 1 cut(s) 150
Psp124BI GAGCTC 1 cut(s) 184
PspN4I GGNNCC 1 cut(s) 198
RsaI GTAC 1 cut(s) 81
RsaNI GTAC 1 cut(s) 80
SacI GAGCTC 1 cut(s) 184
SaqAI TTAA 2 cut(s) 20, 87
SatI GCNGC 1 cut(s) 149
SduI GDGCHC 1 cut(s) 184
SetI ASST 3 cut(s) 87, 162, 184
Sse9I AATT 2 cut(s) 22, 51
SseBI AGGCCT 1 cut(s) 171
SspMI CTAG 2 cut(s) 135, 161
SstI GAGCTC 1 cut(s) 184
StuI AGGCCT 1 cut(s) 171
TaqI TCGA 1 cut(s) 93
TasI AATT 2 cut(s) 22, 51
TatI WGTACW 1 cut(s) 79
TfiI GAWTC 1 cut(s) 56
Tru1I TTAA 2 cut(s) 20, 87
Tru9I TTAA 2 cut(s) 20, 87
TscAI CASTG 1 cut(s) 191
TseI GCWGC 1 cut(s) 148
TspGWI ACGGA 2 cut(s) 119, 189
TspRI CASTG 1 cut(s) 191
XceI RCATGY 1 cut(s) 31
XmnI GAANNNNTTC 1 cut(s) 55
XspI CTAG 2 cut(s) 135, 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.