Rh7BG170100

Glutamate-cysteine ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001519
Physical Location & Seq
Forward (+)
13251159 .. 13257140
5982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG170100.1

Sequence Viewer

Length: 243 bp
ATGGACGGTGATAACATTATTGGACTCAAAAAGCAGAGTATATCACTTGAACCTGGAGGTCAGTTTGAGCTTAGAGGTGCACCTCTTGAAACTCTGCATCAAGTTTGTATTGAAGTCAATTCACAACTCTGTCAGGTCAATCTGGAACTCAGTTCTGAAGCAGACATGAAACAGAAACTTCGTGCTAGTCTTGCTTTGCAGCCTGTGAGGAAAACTGGCATGAACCTTTTTTTTCCCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004357 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006750 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009403 GO:0009404 GO:0009408 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009700 GO:0009719 GO:0009725 GO:0009753 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010193 GO:0016043 GO:0016143 GO:0016144 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019184 GO:0019438 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0022414 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0033554 GO:0034641 GO:0042221 GO:0042398 GO:0042430 GO:0042435 GO:0042493 GO:0042545 GO:0042742 GO:0043043 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045087 GO:0045229 GO:0046217 GO:0046483 GO:0046677 GO:0046686 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0061458 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0090567 GO:0098542 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
ko00270 ko00480 ko01100 map00270 map00480 map01100
Pfam Domains
Protein Families
GCS2

Protein Analysis

80

Amino Acids

8.84

Weight (kDa)

5.7

Isoelectric Point (pI)

51.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 177
AgsI TTSAA 3 cut(s) 50, 89, 113
AjnI CCWGG 1 cut(s) 52
AluBI AGCT 1 cut(s) 70
AluI AGCT 1 cut(s) 70
Alw21I GWGCWC 1 cut(s) 82
Alw44I GTGCAC 1 cut(s) 78
ApaLI GTGCAC 1 cut(s) 78
ApeKI GCWGC 1 cut(s) 199
AsuHPI GGTGA 1 cut(s) 20
BaeGI GKGCMC 1 cut(s) 82
Bbv12I GWGCWC 1 cut(s) 82
BbvI GCAGC 1 cut(s) 211
BciT130I CCWGG 1 cut(s) 54
BfaI CTAG 1 cut(s) 186
BisI GCNGC 1 cut(s) 200
BlsI GCNGC 1 cut(s) 201
Bme1390I CCNGG 1 cut(s) 54
BmrFI CCNGG 1 cut(s) 54
BmsI GCATC 1 cut(s) 106
BpmI CTGGAG 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 220
BseBI CCWGG 1 cut(s) 54
BseMII CTCAG 1 cut(s) 163
BseNI ACTGG 1 cut(s) 220
BseSI GKGCMC 1 cut(s) 82
BseXI GCAGC 1 cut(s) 211
BsiHKAI GWGCWC 1 cut(s) 82
Bsp1286I GDGCHC 1 cut(s) 82
BspCNI CTCAG 1 cut(s) 162
BsrI ACTGG 1 cut(s) 220
Bst2UI CCWGG 1 cut(s) 54
Bst4CI ACNGT 1 cut(s) 8
BstDEI CTNAG 2 cut(s) 71, 149
BstMWI GCNNNNNNNGC 1 cut(s) 191
BstNI CCWGG 1 cut(s) 54
BstSCI CCNGG 1 cut(s) 52
BstSLI GKGCMC 1 cut(s) 82
BstV1I GCAGC 1 cut(s) 211
CviAII CATG 2 cut(s) 166, 220
CviJI RGCY 2 cut(s) 70, 202
CviKI_1 RGCY 2 cut(s) 70, 202
DdeI CTNAG 2 cut(s) 71, 149
Eco57I CTGAAG 1 cut(s) 177
EcoRII CCWGG 1 cut(s) 52
FaeI CATG 2 cut(s) 169, 223
FaiI YATR 3 cut(s) 41, 167, 221
FatI CATG 2 cut(s) 165, 219
Fnu4HI GCNGC 1 cut(s) 200
Fsp4HI GCNGC 1 cut(s) 200
FspBI CTAG 1 cut(s) 186
GluI GCNGC 1 cut(s) 200
GsuI CTGGAG 1 cut(s) 75
Hin1II CATG 2 cut(s) 169, 223
HinfI GANTC 1 cut(s) 24
HphI GGTGA 1 cut(s) 20
Hpy166II GTNNAC 1 cut(s) 80
Hpy188I TCNGA 1 cut(s) 157
Hpy188III TCNNGA 2 cut(s) 86, 143
Hpy8I GTNNAC 1 cut(s) 80
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4V TGCA 3 cut(s) 80, 97, 199
HpyF10VI GCNNNNNNNGC 1 cut(s) 191
HpyF3I CTNAG 2 cut(s) 71, 149
Hsp92II CATG 2 cut(s) 169, 223
LpnPI CCDG 6 cut(s) 39, 66, 119, 128, 201, 216
Lsp1109I GCAGC 1 cut(s) 211
LweI GCATC 1 cut(s) 106
MaeI CTAG 1 cut(s) 186
MhlI GDGCHC 1 cut(s) 82
MluCI AATT 1 cut(s) 118
MlyI GAGTC 1 cut(s) 18
MnlI CCTC 4 cut(s) 50, 68, 93, 201
MspR9I CCNGG 1 cut(s) 54
MvaI CCWGG 1 cut(s) 54
MwoI GCNNNNNNNGC 1 cut(s) 191
NlaIII CATG 2 cut(s) 169, 223
PkrI GCNGC 1 cut(s) 201
PleI GAGTC 1 cut(s) 18
PpsI GAGTC 1 cut(s) 18
Psp6I CCWGG 1 cut(s) 52
PspGI CCWGG 1 cut(s) 52
SatI GCNGC 1 cut(s) 200
SchI GAGTC 1 cut(s) 18
ScrFI CCNGG 1 cut(s) 54
SduI GDGCHC 1 cut(s) 82
SetI ASST 7 cut(s) 55, 61, 72, 79, 85, 138, 228
SfaNI GCATC 1 cut(s) 106
Sse9I AATT 1 cut(s) 118
SspMI CTAG 1 cut(s) 186
StyD4I CCNGG 1 cut(s) 52
TaaI ACNGT 1 cut(s) 8
TasI AATT 1 cut(s) 118
TseI GCWGC 1 cut(s) 199
TspDTI ATGAA 2 cut(s) 182, 236
VneI GTGCAC 1 cut(s) 78
XspI CTAG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.