RLG00000003911

Glutamate-cysteine ligase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
54226793 .. 54229906
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003911

Sequence Viewer

Length: 1455 bp
ATGGCACTCATTTCCCAGACAAGTTCATCAAACTACTGCAGAAGCATTGGCTTCTCTTCCTCTGCATTTTATTCTACCACTGCTAGGAACATACAGATTTTGCATACAGACAATGTTGCAGCACAGAAACAAGGACGAAGGAGTGCGATAGTTGCTACAAGTCCTATCACAGAAGATGCAGTAGTAGCTACAATGCCGCTGACAAAAGAAGATCTTGTAGGCCATCTTGCCTCTGGATGCAAGCCTAAAGAGAAATGGAGAATTGGCGTGGAACATGAGAGGTTTGGCTTCGATTTAAAAAGTTTACGTCCCATGCAATATCAACAAATAGCTGAGCTGCTAAATGGGATTGCTGAGAGATTTAAGTGGGAGAAAATCGTGGAAGGTGATAACATTATTGGACTCAGACAGGGTAAGCAGAGTATATCACTTGAACCTGGAGGTCAGTTTGAGCTGAGTGGTGCACCTCTTGAATCTCTGCATCAAGTTTGTTCGGAAGTCGATTCACAACTCTGTCAGGTTAAAGCAGTTGCAGAGAAAATGGGAATCGGATTTCTTGATATTGGTGGTCAGCCGAAATGGAGCAATCAAGACATACCTCTGATGCCCAGGGGAAGACATGAGATTGTTTATAATTACATGCCAAAAGTTGGCTCGCTTGGACATGATTTGATGTTCAGGATAAGCAGTGTACAGGTCAATCTGGACTTCAGTTCTGAAGCAGACATGAAACGGAAACTTCGTGCTAGTCTTGCTTTGCAGCCTATAGCAACAGCTTTGTTTGCAAATTCACCTTTTACTGAAGGAAAGCCAAATGGTTTTTTAAGCAGGAGAAGTCACATCTATACTGATACTGACAAGGATCGCACTGGCATTCTTCCTTTTGCTTTCGATGACTCCTTTGGGTTTGAGCGATATGTTGATTATGCTCTTGATGTTCCCATGTACTGTGTTTATCGGAAAAAGAAGTGTATCGACTGTACTGGAATGACCTTTCGGGACTTTATGGCAGGAAAGCTTCACTGCCTTCCGGGTGAATTACCGACCCTGAATGATTGGGAGAATCATTTGGGAACTCTATATCCAGAGGTCAGGCTGAGGAGATACTTAGAGATGAGGGGTGCTGATGGAGGGCCTTGGAGGCGGTTATGTGCTTTGCCTGCATTTTGGGTGGGTTTACTGTATGATGAGGTGTCCCTGCAGAATGTGTTAGATATGATAGCTGATTGGACTCCTGAAGAAAGACAGATGCTGAGAGATAAGCAAGTTGCCGAAGATGTAGTAAAGTTTGCAAAGGATGGCCTGGAAAGAAGAGGCTTTAAGGAATCAGGGTACTTAAATGAAGCGGTGGAGGTTGTGAGAACAGGTGTAACACCAGCTGAGAAGCTATTGGAGTTGTATAATGGGAAGTGGAAACAACAGATAGACCCAGTTTTTGAAGAGCTACTATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000302 GO:0001101 GO:0002213 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004357 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006518 GO:0006575 GO:0006725 GO:0006749 GO:0006750 GO:0006790 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009403 GO:0009404 GO:0009408 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009700 GO:0009719 GO:0009725 GO:0009753 GO:0009791 GO:0009814 GO:0009816 GO:0009908 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010193 GO:0016043 GO:0016143 GO:0016144 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019184 GO:0019438 GO:0019748 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0022414 GO:0032501 GO:0032502 GO:0033036 GO:0033037 GO:0033554 GO:0034641 GO:0042221 GO:0042398 GO:0042430 GO:0042435 GO:0042493 GO:0042545 GO:0042742 GO:0043043 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045087 GO:0045229 GO:0046217 GO:0046483 GO:0046677 GO:0046686 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0050832 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051641 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052386 GO:0052482 GO:0052542 GO:0052543 GO:0052544 GO:0052545 GO:0061458 GO:0070727 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0090567 GO:0098542 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659 GO:1901700
Pfam Domains
Protein Families

Protein Analysis

485

Amino Acids

54.71

Weight (kDa)

6.2

Isoelectric Point (pI)

45.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GCS2 PF04107 87 - 480 4.3e-88 Glutamate-cysteine ligase family 2(GCS2)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 633
AccB7I CCANNNNNTGG 1 cut(s) 650
AciI CCGC 3 cut(s) 197, 1144, 1346
AclWI GGATC 1 cut(s) 870
AcsI RAATTY 1 cut(s) 787
AcuI CTGAAG 4 cut(s) 694, 738, 822, 1257
AfaI GTAC 4 cut(s) 693, 947, 982, 1334
AfiI CCNNNNNNNGG 2 cut(s) 84, 650
AgsI TTSAA 3 cut(s) 434, 473, 1439
AjnI CCWGG 3 cut(s) 436, 608, 1302
AloI GAACNNNNNNTCC 2 cut(s) 1066, 1098
Alw21I GWGCWC 1 cut(s) 466
Alw44I GTGCAC 1 cut(s) 462
AlwI GGATC 1 cut(s) 870
AlwNI CAGNNNCTG 1 cut(s) 1252
AoxI GGCC 3 cut(s) 220, 1133, 1300
ApaLI GTGCAC 1 cut(s) 462
ApeKI GCWGC 3 cut(s) 119, 337, 760
ApoI RAATTY 1 cut(s) 787
ArsI GACNNNNNNTTYG 2 cut(s) 1418, 1450
AspS9I GGNCC 1 cut(s) 1133
AsuC2I CCSGG 1 cut(s) 1032
AsuHPI GGTGA 3 cut(s) 398, 783, 1046
BaeGI GKGCMC 1 cut(s) 466
BbsI GAAGAC 1 cut(s) 622
Bbv12I GWGCWC 1 cut(s) 466
BbvCI CCTCAGC 1 cut(s) 1097
BbvI GCAGC 3 cut(s) 131, 324, 772
BccI CCATC 3 cut(s) 231, 1121, 1292
BciT130I CCWGG 3 cut(s) 438, 610, 1304
BcnI CCSGG 1 cut(s) 1032
BfaI CTAG 2 cut(s) 84, 747
BfmI CTRYAG 3 cut(s) 37, 765, 1199
BglI GCCNNNNNGGC 1 cut(s) 1141
BglII AGATCT 1 cut(s) 211
BisI GCNGC 4 cut(s) 120, 197, 338, 761
BlpI GCTNAGC 1 cut(s) 333
BlsI GCNGC 4 cut(s) 121, 198, 339, 762
Bme1390I CCNGG 4 cut(s) 438, 610, 1032, 1304
BmgT120I GGNCC 1 cut(s) 1133
BmrFI CCNGG 4 cut(s) 438, 610, 1032, 1304
BmrI ACTGGG 1 cut(s) 1424
BmsI GCATC 5 cut(s) 166, 227, 490, 594, 1239
BmuI ACTGGG 1 cut(s) 1424
BpiI GAAGAC 1 cut(s) 622
BpmI CTGGAG 1 cut(s) 459
Bpu10I CCTNAGC 1 cut(s) 1097
Bpu1102I GCTNAGC 1 cut(s) 333
BpuMI CCSGG 1 cut(s) 1032
BsaJI CCNNGG 3 cut(s) 608, 609, 1136
Bsc4I CCNNNNNNNGG 2 cut(s) 84, 650
Bse1I ACTGG 3 cut(s) 874, 988, 1430
BseBI CCWGG 3 cut(s) 438, 610, 1304
BseDI CCNNGG 3 cut(s) 608, 609, 1136
BseGI GGATG 2 cut(s) 242, 1303
BseLI CCNNNNNNNGG 2 cut(s) 84, 650
BseMII CTCAG 7 cut(s) 324, 345, 418, 446, 1088, 1244, 1371
BseNI ACTGG 3 cut(s) 874, 988, 1430
BseRI GAGGAG 1 cut(s) 1114
BseSI GKGCMC 1 cut(s) 466
BseXI GCAGC 3 cut(s) 131, 324, 772
BshFI GGCC 3 cut(s) 222, 1135, 1302
BsiHKAI GWGCWC 1 cut(s) 466
BsiSI CCGG 1 cut(s) 1031
BslFI GGGAC 3 cut(s) 294, 1013, 1180
BslI CCNNNNNNNGG 2 cut(s) 84, 650
BsmFI GGGAC 3 cut(s) 294, 1013, 1180
BsmI GAATGC 1 cut(s) 873
BsnI GGCC 3 cut(s) 222, 1135, 1302
Bsp1286I GDGCHC 1 cut(s) 466
Bsp1407I TGTACA 1 cut(s) 691
Bsp143I GATC 2 cut(s) 211, 862
Bsp1720I GCTNAGC 1 cut(s) 333
BspACI CCGC 3 cut(s) 197, 1144, 1346
BspANI GGCC 3 cut(s) 222, 1135, 1302
BspCNI CTCAG 7 cut(s) 325, 346, 417, 447, 1089, 1245, 1372
BspMAI CTGCAG 2 cut(s) 41, 1203
BspPI GGATC 1 cut(s) 870
BspQI GCTCTTC 1 cut(s) 1434
BsrGI TGTACA 1 cut(s) 691
BsrI ACTGG 3 cut(s) 874, 988, 1430
BssECI CCNNGG 3 cut(s) 608, 609, 1136
BssMI GATC 2 cut(s) 211, 862
BssT1I CCWWGG 1 cut(s) 1136
Bst2UI CCWGG 3 cut(s) 438, 610, 1304
Bst4CI ACNGT 3 cut(s) 950, 980, 1182
Bst6I CTCTTC 3 cut(s) 61, 1306, 1434
BstAUI TGTACA 1 cut(s) 691
BstC8I GCNNGC 3 cut(s) 242, 656, 1161
BstDEI CTNAG 8 cut(s) 333, 354, 404, 455, 1097, 1108, 1253, 1380
BstF5I GGATG 2 cut(s) 242, 1303
BstKTI GATC 2 cut(s) 214, 865
BstMBI GATC 2 cut(s) 211, 862
BstMWI GCNNNNNNNGC 6 cut(s) 152, 185, 752, 782, 1141, 1160
BstNI CCWGG 3 cut(s) 438, 610, 1304
BstNSI RCATGY 1 cut(s) 643
BstSCI CCNGG 4 cut(s) 436, 608, 1030, 1302
BstSFI CTRYAG 3 cut(s) 37, 765, 1199
BstSLI GKGCMC 1 cut(s) 466
BstV1I GCAGC 3 cut(s) 131, 324, 772
BstV2I GAAGAC 1 cut(s) 622
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BsuRI GGCC 3 cut(s) 222, 1135, 1302
BtsCI GGATG 2 cut(s) 242, 1303
BtsI GCAGTG 3 cut(s) 78, 694, 1021
BtsIMutI CAGTG 4 cut(s) 78, 694, 867, 1021
Cac8I GCNNGC 3 cut(s) 242, 656, 1161
CaiI CAGNNNCTG 1 cut(s) 1252
Cfr13I GGNCC 1 cut(s) 1133
Csp6I GTAC 4 cut(s) 692, 946, 981, 1333
CviAII CATG 7 cut(s) 275, 313, 620, 640, 665, 727, 943
CviQI GTAC 4 cut(s) 692, 946, 981, 1333
DdeI CTNAG 8 cut(s) 333, 354, 404, 455, 1097, 1108, 1253, 1380
DpnI GATC 2 cut(s) 213, 864
DpnII GATC 2 cut(s) 211, 862
DraI TTTAAA 1 cut(s) 297
Eam1104I CTCTTC 3 cut(s) 61, 1306, 1434
EarI CTCTTC 3 cut(s) 61, 1306, 1434
Eco130I CCWWGG 1 cut(s) 1136
Eco57I CTGAAG 4 cut(s) 694, 738, 822, 1257
EcoO109I RGGNCCY 1 cut(s) 1133
EcoRII CCWGG 3 cut(s) 436, 608, 1302
EcoT14I CCWWGG 1 cut(s) 1136
ErhI CCWWGG 1 cut(s) 1136
FaeI CATG 7 cut(s) 278, 316, 623, 643, 668, 730, 946
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FaqI GGGAC 3 cut(s) 294, 1013, 1180
FatI CATG 7 cut(s) 274, 312, 619, 639, 664, 726, 942
Fnu4HI GCNGC 4 cut(s) 120, 197, 338, 761
FokI GGATG 2 cut(s) 249, 1310
Fsp4HI GCNGC 4 cut(s) 120, 197, 338, 761
FspBI CTAG 2 cut(s) 84, 747
GluI GCNGC 4 cut(s) 120, 197, 338, 761
GsuI CTGGAG 1 cut(s) 459
HaeIII GGCC 3 cut(s) 222, 1135, 1302
HapII CCGG 1 cut(s) 1031
Hin1II CATG 7 cut(s) 278, 316, 623, 643, 668, 730, 946
HindIII AAGCTT 1 cut(s) 1016
HinfI GANTC 8 cut(s) 402, 473, 503, 546, 896, 1063, 1231, 1325
HpaII CCGG 1 cut(s) 1031
HphI GGTGA 3 cut(s) 398, 783, 1046
Hpy166II GTNNAC 4 cut(s) 305, 464, 692, 1178
Hpy188I TCNGA 6 cut(s) 407, 496, 551, 603, 718, 960
Hpy8I GTNNAC 4 cut(s) 305, 464, 692, 1178
HpyAV CCTTC 4 cut(s) 132, 377, 797, 1037
HpyCH4III ACNGT 3 cut(s) 950, 980, 1182
HpyCH4IV ACGT 1 cut(s) 307
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 185, 752, 782, 1141, 1160
HpyF3I CTNAG 8 cut(s) 333, 354, 404, 455, 1097, 1108, 1253, 1380
HpySE526I ACGT 1 cut(s) 307
Hsp92II CATG 7 cut(s) 278, 316, 623, 643, 668, 730, 946
Kzo9I GATC 2 cut(s) 211, 862
LguI GCTCTTC 1 cut(s) 1434
LmnI GCTCC 1 cut(s) 582
Lsp1109I GCAGC 3 cut(s) 131, 324, 772
LweI GCATC 5 cut(s) 166, 227, 490, 594, 1239
MaeI CTAG 2 cut(s) 84, 747
MaeII ACGT 1 cut(s) 307
MaeIII GTNAC 2 cut(s) 836, 1369
MalI GATC 2 cut(s) 213, 864
MboI GATC 2 cut(s) 211, 862
MboII GAAGA 9 cut(s) 48, 185, 221, 627, 869, 1250, 1286, 1323, 1451
MflI RGATCY 1 cut(s) 211
MhlI GDGCHC 1 cut(s) 466
MluCI AATT 4 cut(s) 261, 634, 787, 1037
MlyI GAGTC 3 cut(s) 396, 890, 1225
MseI TTAA 6 cut(s) 296, 363, 522, 824, 1320, 1337
MspA1I CMGCKG 2 cut(s) 199, 1379
MspI CCGG 1 cut(s) 1031
MspR9I CCNGG 4 cut(s) 438, 610, 1032, 1304
Mva1269I GAATGC 1 cut(s) 873
MvaI CCWGG 3 cut(s) 438, 610, 1304
MwoI GCNNNNNNNGC 6 cut(s) 152, 185, 752, 782, 1141, 1160
NciI CCSGG 1 cut(s) 1032
NdeII GATC 2 cut(s) 211, 862
NlaIII CATG 7 cut(s) 278, 316, 623, 643, 668, 730, 946
NmuCI GTSAC 1 cut(s) 836
NspI RCATGY 1 cut(s) 643
PasI CCCWGGG 1 cut(s) 609
PciSI GCTCTTC 1 cut(s) 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 739
PctI GAATGC 1 cut(s) 873
PfeI GAWTC 5 cut(s) 473, 503, 546, 1063, 1325
PflMI CCANNNNNTGG 1 cut(s) 650
PkrI GCNGC 4 cut(s) 121, 198, 339, 762
PleI GAGTC 3 cut(s) 396, 890, 1225
PpsI GAGTC 3 cut(s) 396, 890, 1225
PsiI TTATAA 1 cut(s) 633
Psp6I CCWGG 3 cut(s) 436, 608, 1302
PspGI CCWGG 3 cut(s) 436, 608, 1302
PspPI GGNCC 1 cut(s) 1133
PstI CTGCAG 2 cut(s) 41, 1203
PstNI CAGNNNCTG 1 cut(s) 1252
PsuI RGATCY 1 cut(s) 211
PvuII CAGCTG 1 cut(s) 1379
RsaI GTAC 4 cut(s) 693, 947, 982, 1334
RsaNI GTAC 4 cut(s) 692, 946, 981, 1333
SapI GCTCTTC 1 cut(s) 1434
SaqAI TTAA 6 cut(s) 296, 363, 522, 824, 1320, 1337
SatI GCNGC 4 cut(s) 120, 197, 338, 761
Sau3AI GATC 2 cut(s) 211, 862
Sau96I GGNCC 1 cut(s) 1133
SchI GAGTC 3 cut(s) 396, 890, 1225
ScrFI CCNGG 4 cut(s) 438, 610, 1032, 1304
SduI GDGCHC 1 cut(s) 466
SfaNI GCATC 5 cut(s) 166, 227, 490, 594, 1239
SfcI CTRYAG 3 cut(s) 37, 765, 1199
Sse9I AATT 4 cut(s) 261, 634, 787, 1037
SsiI CCGC 3 cut(s) 197, 1144, 1346
SspMI CTAG 2 cut(s) 84, 747
StyD4I CCNGG 4 cut(s) 436, 608, 1030, 1302
StyI CCWWGG 1 cut(s) 1136
TaaI ACNGT 3 cut(s) 950, 980, 1182
TaiI ACGT 1 cut(s) 310
TaqI TCGA 4 cut(s) 291, 501, 891, 975
TasI AATT 4 cut(s) 261, 634, 787, 1037
TatI WGTACW 3 cut(s) 691, 945, 980
TauI GCSGC 1 cut(s) 199
TfiI GAWTC 5 cut(s) 473, 503, 546, 1063, 1325
Tru1I TTAA 6 cut(s) 296, 363, 522, 824, 1320, 1337
Tru9I TTAA 6 cut(s) 296, 363, 522, 824, 1320, 1337
TscAI CASTG 4 cut(s) 85, 694, 874, 1028
TseFI GTSAC 1 cut(s) 836
TseI GCWGC 3 cut(s) 119, 337, 760
Tsp45I GTSAC 1 cut(s) 836
TspDTI ATGAA 3 cut(s) 15, 743, 1356
TspGWI ACGGA 1 cut(s) 748
TspRI CASTG 4 cut(s) 85, 694, 874, 1028
Van91I CCANNNNNTGG 1 cut(s) 650
VneI GTGCAC 1 cut(s) 462
XapI RAATTY 1 cut(s) 787
XceI RCATGY 1 cut(s) 643
XcmI CCANNNNNNNNNTGG 1 cut(s) 230
XspI CTAG 2 cut(s) 84, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.