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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1137 |
| Acc16I | TGCGCA | 1 cut(s) | 103 |
| Acc36I | ACCTGC | 1 cut(s) | 137 |
| AccB1I | GGYRCC | 1 cut(s) | 760 |
| AccI | GTMKAC | 2 cut(s) | 383, 438 |
| AclI | AACGTT | 1 cut(s) | 143 |
| AclWI | GGATC | 2 cut(s) | 736, 1108 |
| AcoI | YGGCCR | 4 cut(s) | 509, 845, 940, 963 |
| AcsI | RAATTY | 1 cut(s) | 996 |
| AcuI | CTGAAG | 1 cut(s) | 314 |
| AcyI | GRCGYC | 1 cut(s) | 1134 |
| AfaI | GTAC | 3 cut(s) | 66, 356, 1051 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 43, 175, 191, 432, 483, 730 |
| AflIII | ACRYGT | 2 cut(s) | 81, 351 |
| AgeI | ACCGGT | 2 cut(s) | 441, 462 |
| AgsI | TTSAA | 3 cut(s) | 541, 989, 1079 |
| AjnI | CCWGG | 2 cut(s) | 496, 723 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 629, 661 |
| AluBI | AGCT | 4 cut(s) | 814, 918, 946, 1022 |
| AluI | AGCT | 4 cut(s) | 814, 918, 946, 1022 |
| Alw21I | GWGCWC | 4 cut(s) | 214, 462, 557, 816 |
| Alw26I | GTCTC | 4 cut(s) | 100, 407, 706, 891 |
| Alw44I | GTGCAC | 1 cut(s) | 458 |
| AlwI | GGATC | 2 cut(s) | 736, 1108 |
| Ama87I | CYCGRG | 1 cut(s) | 258 |
| AoxI | GGCC | 6 cut(s) | 177, 499, 509, 845, 940, 963 |
| ApaLI | GTGCAC | 1 cut(s) | 458 |
| ApeKI | GCWGC | 3 cut(s) | 132, 372, 1124 |
| ApoI | RAATTY | 1 cut(s) | 996 |
| AseI | ATTAAT | 1 cut(s) | 651 |
| AsiGI | ACCGGT | 2 cut(s) | 441, 462 |
| AspLEI | GCGC | 5 cut(s) | 104, 368, 409, 530, 1011 |
| AspS9I | GGNCC | 4 cut(s) | 254, 423, 444, 1083 |
| AsuC2I | CCSGG | 3 cut(s) | 221, 513, 793 |
| AsuHPI | GGTGA | 1 cut(s) | 1100 |
| AvaI | CYCGRG | 1 cut(s) | 258 |
| AvaII | GGWCC | 4 cut(s) | 254, 423, 444, 1083 |
| BaeGI | GKGCMC | 1 cut(s) | 462 |
| BalI | TGGCCA | 1 cut(s) | 965 |
| BanI | GGYRCC | 1 cut(s) | 760 |
| BanII | GRGCYC | 2 cut(s) | 676, 816 |
| BauI | CACGAG | 2 cut(s) | 97, 213 |
| BbsI | GAAGAC | 3 cut(s) | 301, 685, 977 |
| Bbv12I | GWGCWC | 4 cut(s) | 214, 462, 557, 816 |
| BbvCI | CCTCAGC | 1 cut(s) | 902 |
| BbvI | GCAGC | 3 cut(s) | 119, 359, 1111 |
| BccI | CCATC | 2 cut(s) | 102, 974 |
| BceAI | ACGGC | 3 cut(s) | 43, 364, 832 |
| BciT130I | CCWGG | 2 cut(s) | 498, 725 |
| BcnI | CCSGG | 3 cut(s) | 221, 513, 793 |
| BcoDI | GTCTC | 4 cut(s) | 100, 407, 706, 891 |
| BfaI | CTAG | 3 cut(s) | 698, 915, 1002 |
| BfoI | RGCGCY | 1 cut(s) | 531 |
| BfuAI | ACCTGC | 1 cut(s) | 137 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 185 |
| BisI | GCNGC | 6 cut(s) | 133, 230, 373, 940, 1106, 1125 |
| BlsI | GCNGC | 6 cut(s) | 134, 231, 374, 941, 1107, 1126 |
| Bme1390I | CCNGG | 5 cut(s) | 221, 498, 513, 725, 793 |
| Bme18I | GGWCC | 4 cut(s) | 254, 423, 444, 1083 |
| BmeT110I | CYCGRG | 1 cut(s) | 258 |
| BmgT120I | GGNCC | 4 cut(s) | 254, 423, 444, 1083 |
| BmiI | GGNNCC | 3 cut(s) | 35, 762, 790 |
| BmrFI | CCNGG | 5 cut(s) | 221, 498, 513, 725, 793 |
| BmsI | GCATC | 3 cut(s) | 56, 272, 706 |
| BpiI | GAAGAC | 3 cut(s) | 301, 685, 977 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 218, 250 |
| Bpu10I | CCTNAGC | 1 cut(s) | 902 |
| BpuMI | CCSGG | 3 cut(s) | 221, 513, 793 |
| BsaHI | GRCGYC | 1 cut(s) | 1134 |
| BsaI | GGTCTC | 1 cut(s) | 891 |
| BsaJI | CCNNGG | 6 cut(s) | 257, 426, 636, 724, 792, 937 |
| BsaWI | WCCGGW | 3 cut(s) | 441, 462, 1085 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 43, 175, 191, 432, 483, 730 |
| Bse118I | RCCGGY | 6 cut(s) | 175, 184, 441, 462, 483, 757 |
| Bse3DI | GCAATG | 1 cut(s) | 969 |
| BseBI | CCWGG | 2 cut(s) | 498, 725 |
| BseDI | CCNNGG | 6 cut(s) | 257, 426, 636, 724, 792, 937 |
| BseGI | GGATG | 5 cut(s) | 113, 287, 646, 742, 930 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 43, 175, 191, 432, 483, 730 |
| BseMI | GCAATG | 1 cut(s) | 969 |
| BseMII | CTCAG | 1 cut(s) | 916 |
| BseRI | GAGGAG | 1 cut(s) | 158 |
| BseSI | GKGCMC | 1 cut(s) | 462 |
| BseXI | GCAGC | 3 cut(s) | 119, 359, 1111 |
| BsgI | GTGCAG | 1 cut(s) | 265 |
| Bsh1285I | CGRYCG | 6 cut(s) | 325, 333, 361, 387, 442, 467 |
| BshFI | GGCC | 6 cut(s) | 179, 501, 511, 847, 942, 965 |
| BshNI | GGYRCC | 1 cut(s) | 760 |
| BshTI | ACCGGT | 2 cut(s) | 441, 462 |
| BsiEI | CGRYCG | 6 cut(s) | 325, 333, 361, 387, 442, 467 |
| BsiHKAI | GWGCWC | 4 cut(s) | 214, 462, 557, 816 |
| BsiHKCI | CYCGRG | 1 cut(s) | 258 |
| BsiWI | CGTACG | 1 cut(s) | 354 |
| BslFI | GGGAC | 5 cut(s) | 143, 203, 459, 970, 1022 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 43, 175, 191, 432, 483, 730 |
| BsmAI | GTCTC | 4 cut(s) | 100, 407, 706, 891 |
| BsmBI | CGTCTC | 2 cut(s) | 100, 407 |
| BsmFI | GGGAC | 5 cut(s) | 143, 203, 459, 970, 1022 |
| BsnI | GGCC | 6 cut(s) | 179, 501, 511, 847, 942, 965 |
| Bso31I | GGTCTC | 1 cut(s) | 891 |
| BsoBI | CYCGRG | 1 cut(s) | 258 |
| Bsp1286I | GDGCHC | 5 cut(s) | 214, 462, 557, 676, 816 |
| Bsp1407I | TGTACA | 1 cut(s) | 1049 |
| Bsp143I | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| Bsp68I | TCGCGA | 1 cut(s) | 1139 |
| BspANI | GGCC | 6 cut(s) | 179, 501, 511, 847, 942, 965 |
| BspCNI | CTCAG | 1 cut(s) | 915 |
| BspLI | GGNNCC | 3 cut(s) | 35, 762, 790 |
| BspMI | ACCTGC | 1 cut(s) | 137 |
| BspPI | GGATC | 2 cut(s) | 736, 1108 |
| BspT107I | GGYRCC | 1 cut(s) | 760 |
| BspTNI | GGTCTC | 1 cut(s) | 891 |
| BsrDI | GCAATG | 1 cut(s) | 969 |
| BsrFI | RCCGGY | 6 cut(s) | 175, 184, 441, 462, 483, 757 |
| BsrGI | TGTACA | 1 cut(s) | 1049 |
| BssAI | RCCGGY | 6 cut(s) | 175, 184, 441, 462, 483, 757 |
| BssECI | CCNNGG | 6 cut(s) | 257, 426, 636, 724, 792, 937 |
| BssMI | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| BssNI | GRCGYC | 1 cut(s) | 1134 |
| BssSI | CACGAG | 2 cut(s) | 97, 213 |
| BssT1I | CCWWGG | 2 cut(s) | 426, 636 |
| Bst2BI | CACGAG | 2 cut(s) | 97, 213 |
| Bst2UI | CCWGG | 2 cut(s) | 498, 725 |
| Bst4CI | ACNGT | 4 cut(s) | 56, 362, 388, 694 |
| BstACI | GRCGYC | 1 cut(s) | 1134 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 238 |
| BstAUI | TGTACA | 1 cut(s) | 1049 |
| BstDEI | CTNAG | 3 cut(s) | 853, 902, 950 |
| BstDSI | CCRYGG | 1 cut(s) | 937 |
| BstF5I | GGATG | 5 cut(s) | 113, 287, 646, 742, 930 |
| BstH2I | RGCGCY | 1 cut(s) | 531 |
| BstHHI | GCGC | 5 cut(s) | 104, 368, 409, 530, 1011 |
| BstKTI | GATC | 5 cut(s) | 325, 333, 686, 731, 1103 |
| BstMAI | GTCTC | 4 cut(s) | 100, 407, 706, 891 |
| BstMBI | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| BstMCI | CGRYCG | 6 cut(s) | 325, 333, 361, 387, 442, 467 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 181, 185, 238, 298, 372, 527, 971 |
| BstNI | CCWGG | 2 cut(s) | 498, 725 |
| BstSCI | CCNGG | 5 cut(s) | 219, 496, 511, 723, 791 |
| BstSLI | GKGCMC | 1 cut(s) | 462 |
| BstV1I | GCAGC | 3 cut(s) | 119, 359, 1111 |
| BstV2I | GAAGAC | 3 cut(s) | 301, 685, 977 |
| BsuRI | GGCC | 6 cut(s) | 179, 501, 511, 847, 942, 965 |
| BtgI | CCRYGG | 1 cut(s) | 937 |
| BtsCI | GGATG | 5 cut(s) | 113, 287, 646, 742, 930 |
| BtsIMutI | CAGTG | 1 cut(s) | 1148 |
| BtuMI | TCGCGA | 1 cut(s) | 1139 |
| BveI | ACCTGC | 1 cut(s) | 137 |
| CfoI | GCGC | 5 cut(s) | 104, 368, 409, 530, 1011 |
| Cfr10I | RCCGGY | 6 cut(s) | 175, 184, 441, 462, 483, 757 |
| Cfr13I | GGNCC | 4 cut(s) | 254, 423, 444, 1083 |
| Cfr42I | CCGCGG | 1 cut(s) | 940 |
| CpoI | CGGWCCG | 1 cut(s) | 444 |
| CseI | GACGC | 4 cut(s) | 72, 89, 359, 1119 |
| Csp6I | GTAC | 3 cut(s) | 65, 355, 1050 |
| CspAI | ACCGGT | 2 cut(s) | 441, 462 |
| CspI | CGGWCCG | 1 cut(s) | 444 |
| CviAII | CATG | 2 cut(s) | 588, 843 |
| CviQI | GTAC | 3 cut(s) | 65, 355, 1050 |
| DdeI | CTNAG | 3 cut(s) | 853, 902, 950 |
| DpnI | GATC | 5 cut(s) | 324, 332, 685, 730, 1102 |
| DpnII | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| EaeI | YGGCCR | 4 cut(s) | 509, 845, 940, 963 |
| EciI | GGCGGA | 3 cut(s) | 436, 744, 749 |
| Ecl136II | GAGCTC | 1 cut(s) | 814 |
| Eco130I | CCWWGG | 2 cut(s) | 426, 636 |
| Eco24I | GRGCYC | 2 cut(s) | 676, 816 |
| Eco31I | GGTCTC | 1 cut(s) | 891 |
| Eco47I | GGWCC | 4 cut(s) | 254, 423, 444, 1083 |
| Eco53kI | GAGCTC | 1 cut(s) | 814 |
| Eco57I | CTGAAG | 1 cut(s) | 314 |
| Eco88I | CYCGRG | 1 cut(s) | 258 |
| EcoICRI | GAGCTC | 1 cut(s) | 814 |
| EcoRI | GAATTC | 1 cut(s) | 996 |
| EcoRII | CCWGG | 2 cut(s) | 496, 723 |
| EcoT14I | CCWWGG | 2 cut(s) | 426, 636 |
| EcoT38I | GRGCYC | 2 cut(s) | 676, 816 |
| ErhI | CCWWGG | 2 cut(s) | 426, 636 |
| Esp3I | CGTCTC | 2 cut(s) | 100, 407 |
| FaeI | CATG | 2 cut(s) | 591, 846 |
| FaiI | YATR | 9 cut(s) | 589, 602, 710, 768, 802, 830, 844, 921, 962 |
| FaqI | GGGAC | 5 cut(s) | 143, 203, 459, 970, 1022 |
| FatI | CATG | 2 cut(s) | 587, 842 |
| FauI | CCCGC | 5 cut(s) | 77, 181, 377, 1106, 1136 |
| FblI | GTMKAC | 2 cut(s) | 383, 438 |
| Fnu4HI | GCNGC | 6 cut(s) | 133, 230, 373, 940, 1106, 1125 |
| FokI | GGATG | 5 cut(s) | 120, 294, 653, 749, 917 |
| FriOI | GRGCYC | 2 cut(s) | 676, 816 |
| Fsp4HI | GCNGC | 6 cut(s) | 133, 230, 373, 940, 1106, 1125 |
| FspBI | CTAG | 3 cut(s) | 698, 915, 1002 |
| FspI | TGCGCA | 1 cut(s) | 103 |
| GlaI | GCGC | 5 cut(s) | 103, 367, 408, 529, 1010 |
| GluI | GCNGC | 6 cut(s) | 133, 230, 373, 940, 1106, 1125 |
| HaeII | RGCGCY | 1 cut(s) | 531 |
| HaeIII | GGCC | 6 cut(s) | 179, 501, 511, 847, 942, 965 |
| HgaI | GACGC | 4 cut(s) | 72, 89, 359, 1119 |
| HhaI | GCGC | 5 cut(s) | 104, 368, 409, 530, 1011 |
| Hin1I | GRCGYC | 1 cut(s) | 1134 |
| Hin1II | CATG | 2 cut(s) | 591, 846 |
| Hin6I | GCGC | 5 cut(s) | 102, 366, 407, 528, 1009 |
| HinP1I | GCGC | 5 cut(s) | 102, 366, 407, 528, 1009 |
| HincII | GTYRAC | 4 cut(s) | 384, 439, 889, 1030 |
| HindII | GTYRAC | 4 cut(s) | 384, 439, 889, 1030 |
| HinfI | GANTC | 4 cut(s) | 90, 751, 824, 1013 |
| HpaI | GTTAAC | 1 cut(s) | 889 |
| HphI | GGTGA | 1 cut(s) | 1100 |
| Hpy166II | GTNNAC | 7 cut(s) | 384, 439, 460, 889, 1030, 1052, 1148 |
| Hpy188I | TCNGA | 6 cut(s) | 281, 322, 330, 576, 688, 1100 |
| Hpy188III | TCNNGA | 5 cut(s) | 87, 313, 656, 821, 1138 |
| Hpy8I | GTNNAC | 7 cut(s) | 384, 439, 460, 889, 1030, 1052, 1148 |
| HpyAV | CCTTC | 3 cut(s) | 131, 289, 487 |
| HpyCH4III | ACNGT | 4 cut(s) | 56, 362, 388, 694 |
| HpyCH4IV | ACGT | 3 cut(s) | 143, 1035, 1134 |
| HpyCH4V | TGCA | 4 cut(s) | 246, 460, 842, 974 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 181, 185, 238, 298, 372, 527, 971 |
| HpyF3I | CTNAG | 3 cut(s) | 853, 902, 950 |
| HpySE526I | ACGT | 3 cut(s) | 143, 1035, 1134 |
| Hsp92I | GRCGYC | 1 cut(s) | 1134 |
| Hsp92II | CATG | 2 cut(s) | 591, 846 |
| HspAI | GCGC | 5 cut(s) | 102, 366, 407, 528, 1009 |
| KroI | GCCGGC | 4 cut(s) | 175, 184, 483, 757 |
| KroNI | GCCGGC | 4 cut(s) | 177, 186, 485, 759 |
| KspAI | GTTAAC | 1 cut(s) | 889 |
| KspI | CCGCGG | 1 cut(s) | 940 |
| Kzo9I | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| LmnI | GCTCC | 4 cut(s) | 39, 499, 863, 1071 |
| Lsp1109I | GCAGC | 3 cut(s) | 119, 359, 1111 |
| LweI | GCATC | 3 cut(s) | 56, 272, 706 |
| MaeI | CTAG | 3 cut(s) | 698, 915, 1002 |
| MaeII | ACGT | 3 cut(s) | 143, 1035, 1134 |
| MaeIII | GTNAC | 2 cut(s) | 532, 739 |
| MalI | GATC | 5 cut(s) | 324, 332, 685, 730, 1102 |
| MboI | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| MboII | GAAGA | 4 cut(s) | 301, 553, 690, 977 |
| MfeI | CAATTG | 1 cut(s) | 975 |
| MhlI | GDGCHC | 5 cut(s) | 214, 462, 557, 676, 816 |
| MlsI | TGGCCA | 1 cut(s) | 965 |
| MluCI | AATT | 6 cut(s) | 10, 505, 545, 880, 975, 996 |
| MluI | ACGCGT | 2 cut(s) | 81, 351 |
| MluNI | TGGCCA | 1 cut(s) | 965 |
| MlyI | GAGTC | 2 cut(s) | 745, 1022 |
| MmeI | TCCRAC | 1 cut(s) | 401 |
| Mox20I | TGGCCA | 1 cut(s) | 965 |
| MreI | CGCCGGCG | 1 cut(s) | 184 |
| MroNI | GCCGGC | 4 cut(s) | 175, 184, 483, 757 |
| MscI | TGGCCA | 1 cut(s) | 965 |
| MseI | TTAA | 4 cut(s) | 504, 651, 879, 888 |
| MslI | CAYNNNNRTG | 1 cut(s) | 586 |
| Msp20I | TGGCCA | 1 cut(s) | 965 |
| MspA1I | CMGCKG | 2 cut(s) | 372, 939 |
| MspR9I | CCNGG | 5 cut(s) | 221, 498, 513, 725, 793 |
| MunI | CAATTG | 1 cut(s) | 975 |
| MvaI | CCWGG | 2 cut(s) | 498, 725 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 181, 185, 238, 298, 372, 527, 971 |
| NaeI | GCCGGC | 4 cut(s) | 177, 186, 485, 759 |
| NciI | CCSGG | 3 cut(s) | 221, 513, 793 |
| NdeII | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| NgoMIV | GCCGGC | 4 cut(s) | 175, 184, 483, 757 |
| NlaIII | CATG | 2 cut(s) | 591, 846 |
| NlaIV | GGNNCC | 3 cut(s) | 35, 762, 790 |
| NruI | TCGCGA | 1 cut(s) | 1139 |
| NsbI | TGCGCA | 1 cut(s) | 103 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 350, 354, 1070, 1128 |
| PdiI | GCCGGC | 4 cut(s) | 177, 186, 485, 759 |
| PfeI | GAWTC | 2 cut(s) | 90, 824 |
| Pfl23II | CGTACG | 1 cut(s) | 354 |
| PflFI | GACNNNGTC | 1 cut(s) | 1034 |
| PfoI | TCCNGGA | 1 cut(s) | 219 |
| PinAI | ACCGGT | 2 cut(s) | 441, 462 |
| PkrI | GCNGC | 6 cut(s) | 134, 231, 374, 941, 1107, 1126 |
| Ple19I | CGATCG | 2 cut(s) | 325, 333 |
| PleI | GAGTC | 2 cut(s) | 745, 1021 |
| PpsI | GAGTC | 2 cut(s) | 745, 1021 |
| PshBI | ATTAAT | 1 cut(s) | 651 |
| Psp124BI | GAGCTC | 1 cut(s) | 816 |
| Psp1406I | AACGTT | 1 cut(s) | 143 |
| Psp6I | CCWGG | 2 cut(s) | 496, 723 |
| PspGI | CCWGG | 2 cut(s) | 496, 723 |
| PspLI | CGTACG | 1 cut(s) | 354 |
| PspN4I | GGNNCC | 3 cut(s) | 35, 762, 790 |
| PspPI | GGNCC | 4 cut(s) | 254, 423, 444, 1083 |
| PsyI | GACNNNGTC | 1 cut(s) | 1034 |
| PvuI | CGATCG | 2 cut(s) | 325, 333 |
| RruI | TCGCGA | 1 cut(s) | 1139 |
| RsaI | GTAC | 3 cut(s) | 66, 356, 1051 |
| RsaNI | GTAC | 3 cut(s) | 65, 355, 1050 |
| RseI | CAYNNNNRTG | 1 cut(s) | 586 |
| Rsr2I | CGGWCCG | 1 cut(s) | 444 |
| RsrII | CGGWCCG | 1 cut(s) | 444 |
| SacI | GAGCTC | 1 cut(s) | 816 |
| SacII | CCGCGG | 1 cut(s) | 940 |
| SalI | GTCGAC | 2 cut(s) | 382, 437 |
| SaqAI | TTAA | 4 cut(s) | 504, 651, 879, 888 |
| SatI | GCNGC | 6 cut(s) | 133, 230, 373, 940, 1106, 1125 |
| Sau3AI | GATC | 5 cut(s) | 322, 330, 683, 728, 1100 |
| Sau96I | GGNCC | 4 cut(s) | 254, 423, 444, 1083 |
| SchI | GAGTC | 2 cut(s) | 745, 1022 |
| ScrFI | CCNGG | 5 cut(s) | 221, 498, 513, 725, 793 |
| SduI | GDGCHC | 5 cut(s) | 214, 462, 557, 676, 816 |
| SfaNI | GCATC | 3 cut(s) | 56, 272, 706 |
| Sfr303I | CCGCGG | 1 cut(s) | 940 |
| SgrAI | CRCCGGYG | 1 cut(s) | 184 |
| SgrBI | CCGCGG | 1 cut(s) | 940 |
| SinI | GGWCC | 4 cut(s) | 254, 423, 444, 1083 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 586 |
| Sse9I | AATT | 6 cut(s) | 10, 505, 545, 880, 975, 996 |
| SspMI | CTAG | 3 cut(s) | 698, 915, 1002 |
| SstI | GAGCTC | 1 cut(s) | 816 |
| StyD4I | CCNGG | 5 cut(s) | 219, 496, 511, 723, 791 |
| StyI | CCWWGG | 2 cut(s) | 426, 636 |
| TaaI | ACNGT | 4 cut(s) | 56, 362, 388, 694 |
| TaiI | ACGT | 3 cut(s) | 146, 1038, 1137 |
| TaqII | GACCGA | 1 cut(s) | 242 |
| TasI | AATT | 6 cut(s) | 10, 505, 545, 880, 975, 996 |
| TatI | WGTACW | 1 cut(s) | 1049 |
| TauI | GCSGC | 3 cut(s) | 232, 942, 1108 |
| TfiI | GAWTC | 2 cut(s) | 90, 824 |
| Tru1I | TTAA | 4 cut(s) | 504, 651, 879, 888 |
| Tru9I | TTAA | 4 cut(s) | 504, 651, 879, 888 |
| TscAI | CASTG | 1 cut(s) | 1155 |
| TseI | GCWGC | 3 cut(s) | 132, 372, 1124 |
| TspDTI | ATGAA | 2 cut(s) | 64, 637 |
| TspGWI | ACGGA | 4 cut(s) | 26, 256, 389, 874 |
| TspRI | CASTG | 1 cut(s) | 1155 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1034 |
| VneI | GTGCAC | 1 cut(s) | 458 |
| VpaK11BI | GGWCC | 4 cut(s) | 254, 423, 444, 1083 |
| VspI | ATTAAT | 1 cut(s) | 651 |
| XapI | RAATTY | 1 cut(s) | 996 |
| XmiI | GTMKAC | 2 cut(s) | 383, 438 |
| XspI | CTAG | 3 cut(s) | 698, 915, 1002 |
| ZraI | GACGTC | 1 cut(s) | 1135 |