No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 421, 2964 |
| AatII | GACGTC | 2 cut(s) | 425, 2040 |
| Acc16I | TGCGCA | 1 cut(s) | 107 |
| Acc36I | ACCTGC | 1 cut(s) | 141 |
| AccB1I | GGYRCC | 4 cut(s) | 523, 604, 1612, 1693 |
| AccBSI | CCGCTC | 5 cut(s) | 914, 933, 2147, 2552, 2571 |
| AccI | GTMKAC | 9 cut(s) | 387, 1092, 1176, 1229, 1260, 1302, 1390, 1462, 2852 |
| AclI | AACGTT | 1 cut(s) | 147 |
| AclWI | GGATC | 4 cut(s) | 442, 1442, 1588, 2011 |
| AcoI | YGGCCR | 8 cut(s) | 942, 1135, 1748, 1843, 1866, 2580, 2811, 2919 |
| AcsI | RAATTY | 3 cut(s) | 988, 1899, 2626 |
| AcuI | CTGAAG | 1 cut(s) | 318 |
| AcyI | GRCGYC | 9 cut(s) | 416, 422, 738, 2037, 2124, 2247, 2379, 2846, 2915 |
| AfaI | GTAC | 5 cut(s) | 70, 360, 1954, 2158, 2883 |
| AflIII | ACRYGT | 2 cut(s) | 85, 355 |
| AgsI | TTSAA | 6 cut(s) | 689, 954, 1892, 1982, 2592, 2950 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 965, 2603 |
| AjiI | CACGTC | 1 cut(s) | 2095 |
| AjnI | CCWGG | 8 cut(s) | 440, 610, 732, 963, 1575, 1699, 2373, 2601 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1481, 1513 |
| AluBI | AGCT | 7 cut(s) | 949, 1331, 1821, 1849, 1925, 2587, 2929 |
| AluI | AGCT | 7 cut(s) | 949, 1331, 1821, 1849, 1925, 2587, 2929 |
| Alw21I | GWGCWC | 2 cut(s) | 218, 2931 |
| Alw26I | GTCTC | 6 cut(s) | 104, 411, 477, 1558, 1794, 2837 |
| AlwI | GGATC | 4 cut(s) | 442, 1442, 1588, 2011 |
| ApeKI | GCWGC | 5 cut(s) | 136, 376, 1358, 2027, 2870 |
| ApoI | RAATTY | 3 cut(s) | 988, 1899, 2626 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 820, 852, 2458, 2490 |
| AseI | ATTAAT | 1 cut(s) | 1503 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2086 |
| AsuHPI | GGTGA | 1 cut(s) | 2003 |
| AsuNHI | GCTAGC | 1 cut(s) | 1361 |
| AvaII | GGWCC | 8 cut(s) | 258, 836, 1414, 1986, 2474, 2765, 2789, 2957 |
| BaeGI | GKGCMC | 4 cut(s) | 607, 726, 1696, 2367 |
| BalI | TGGCCA | 1 cut(s) | 1868 |
| BanI | GGYRCC | 4 cut(s) | 523, 604, 1612, 1693 |
| BanII | GRGCYC | 4 cut(s) | 1528, 2121, 2145, 2931 |
| BauI | CACGAG | 2 cut(s) | 101, 217 |
| BbsI | GAAGAC | 4 cut(s) | 305, 1537, 1880, 2248 |
| Bbv12I | GWGCWC | 2 cut(s) | 218, 2931 |
| BbvCI | CCTCAGC | 1 cut(s) | 1805 |
| BbvI | GCAGC | 5 cut(s) | 123, 363, 1345, 2014, 2882 |
| BccI | CCATC | 4 cut(s) | 106, 684, 1877, 2710 |
| BciT130I | CCWGG | 8 cut(s) | 442, 612, 734, 965, 1577, 1701, 2375, 2603 |
| BcoDI | GTCTC | 6 cut(s) | 104, 411, 477, 1558, 1794, 2837 |
| BfaI | CTAG | 7 cut(s) | 1038, 1362, 1374, 1550, 1818, 1905, 2676 |
| BfuAI | ACCTGC | 1 cut(s) | 141 |
| BglI | GCCNNNNNGGC | 5 cut(s) | 189, 914, 1071, 2552, 2885 |
| Bme18I | GGWCC | 8 cut(s) | 258, 836, 1414, 1986, 2474, 2765, 2789, 2957 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 965, 2603 |
| BmgBI | CACGTC | 1 cut(s) | 2095 |
| BmsI | GCATC | 6 cut(s) | 60, 276, 1344, 1558, 2313, 2719 |
| BmtI | GCTAGC | 1 cut(s) | 1365 |
| BpiI | GAAGAC | 4 cut(s) | 305, 1537, 1880, 2248 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 222, 254 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1805 |
| Bsa29I | ATCGAT | 1 cut(s) | 2307 |
| BsaHI | GRCGYC | 9 cut(s) | 416, 422, 738, 2037, 2124, 2247, 2379, 2846, 2915 |
| BsaI | GGTCTC | 1 cut(s) | 1794 |
| BsaWI | WCCGGW | 2 cut(s) | 1411, 1988 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2834, 2864 |
| Bse118I | RCCGGY | 8 cut(s) | 179, 188, 520, 1609, 2103, 2169, 2762, 2884 |
| Bse1I | ACTGG | 1 cut(s) | 455 |
| Bse3DI | GCAATG | 1 cut(s) | 1872 |
| BseBI | CCWGG | 8 cut(s) | 442, 612, 734, 965, 1577, 1701, 2375, 2603 |
| BseCI | ATCGAT | 1 cut(s) | 2307 |
| BseGI | GGATG | 8 cut(s) | 117, 291, 505, 1498, 1594, 1833, 2721, 2749 |
| BseMI | GCAATG | 1 cut(s) | 1872 |
| BseMII | CTCAG | 1 cut(s) | 1819 |
| BseNI | ACTGG | 1 cut(s) | 455 |
| BsePI | GCGCGC | 6 cut(s) | 2207, 2234, 2236, 2873, 2875, 2904 |
| BseRI | GAGGAG | 1 cut(s) | 162 |
| BseSI | GKGCMC | 4 cut(s) | 607, 726, 1696, 2367 |
| BseX3I | CGGCCG | 2 cut(s) | 942, 2580 |
| BseXI | GCAGC | 5 cut(s) | 123, 363, 1345, 2014, 2882 |
| BsgI | GTGCAG | 1 cut(s) | 269 |
| BshNI | GGYRCC | 4 cut(s) | 523, 604, 1612, 1693 |
| BshVI | ATCGAT | 1 cut(s) | 2307 |
| BsiHKAI | GWGCWC | 2 cut(s) | 218, 2931 |
| BsiWI | CGTACG | 1 cut(s) | 358 |
| BslFI | GGGAC | 8 cut(s) | 147, 207, 792, 1469, 1873, 1925, 2111, 2431 |
| BsmAI | GTCTC | 6 cut(s) | 104, 411, 477, 1558, 1794, 2837 |
| BsmBI | CGTCTC | 3 cut(s) | 104, 411, 2837 |
| BsmFI | GGGAC | 8 cut(s) | 147, 207, 792, 1469, 1873, 1925, 2111, 2431 |
| BsmI | GAATGC | 1 cut(s) | 439 |
| Bso31I | GGTCTC | 1 cut(s) | 1794 |
| Bsp1286I | GDGCHC | 9 cut(s) | 218, 607, 726, 1528, 1696, 2121, 2145, 2367, 2931 |
| Bsp1407I | TGTACA | 1 cut(s) | 1952 |
| Bsp19I | CCATGG | 3 cut(s) | 1138, 1233, 1264 |
| Bsp68I | TCGCGA | 1 cut(s) | 2042 |
| BspCNI | CTCAG | 1 cut(s) | 1818 |
| BspDI | ATCGAT | 1 cut(s) | 2307 |
| BspMI | ACCTGC | 1 cut(s) | 141 |
| BspOI | GCTAGC | 1 cut(s) | 1365 |
| BspPI | GGATC | 4 cut(s) | 442, 1442, 1588, 2011 |
| BspT107I | GGYRCC | 4 cut(s) | 523, 604, 1612, 1693 |
| BspTNI | GGTCTC | 1 cut(s) | 1794 |
| BsrBI | CCGCTC | 5 cut(s) | 914, 933, 2147, 2552, 2571 |
| BsrDI | GCAATG | 1 cut(s) | 1872 |
| BsrFI | RCCGGY | 8 cut(s) | 179, 188, 520, 1609, 2103, 2169, 2762, 2884 |
| BsrGI | TGTACA | 1 cut(s) | 1952 |
| BsrI | ACTGG | 1 cut(s) | 455 |
| BssAI | RCCGGY | 8 cut(s) | 179, 188, 520, 1609, 2103, 2169, 2762, 2884 |
| BssHII | GCGCGC | 6 cut(s) | 2207, 2234, 2236, 2873, 2875, 2904 |
| BssNI | GRCGYC | 9 cut(s) | 416, 422, 738, 2037, 2124, 2247, 2379, 2846, 2915 |
| BssSI | CACGAG | 2 cut(s) | 101, 217 |
| BssT1I | CCWWGG | 7 cut(s) | 1138, 1233, 1243, 1264, 1488, 2186, 2960 |
| Bst2BI | CACGAG | 2 cut(s) | 101, 217 |
| Bst2UI | CCWGG | 8 cut(s) | 442, 612, 734, 965, 1577, 1701, 2375, 2603 |
| Bst6I | CTCTTC | 1 cut(s) | 422 |
| BstACI | GRCGYC | 9 cut(s) | 416, 422, 738, 2037, 2124, 2247, 2379, 2846, 2915 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 242 |
| BstAUI | TGTACA | 1 cut(s) | 1952 |
| BstDEI | CTNAG | 3 cut(s) | 1756, 1805, 1853 |
| BstDSI | CCRYGG | 8 cut(s) | 1096, 1138, 1180, 1233, 1264, 1306, 1840, 2838 |
| BstEII | GGTNACC | 2 cut(s) | 977, 2615 |
| BstF5I | GGATG | 8 cut(s) | 117, 291, 505, 1498, 1594, 1833, 2721, 2749 |
| BstMAI | GTCTC | 6 cut(s) | 104, 411, 477, 1558, 1794, 2837 |
| BstNI | CCWGG | 8 cut(s) | 442, 612, 734, 965, 1577, 1701, 2375, 2603 |
| BstPI | GGTNACC | 2 cut(s) | 977, 2615 |
| BstSLI | GKGCMC | 4 cut(s) | 607, 726, 1696, 2367 |
| BstV1I | GCAGC | 5 cut(s) | 123, 363, 1345, 2014, 2882 |
| BstV2I | GAAGAC | 4 cut(s) | 305, 1537, 1880, 2248 |
| BstZI | CGGCCG | 2 cut(s) | 942, 2580 |
| Bsu15I | ATCGAT | 1 cut(s) | 2307 |
| BsuTUI | ATCGAT | 1 cut(s) | 2307 |
| BtgI | CCRYGG | 8 cut(s) | 1096, 1138, 1180, 1233, 1264, 1306, 1840, 2838 |
| BtgZI | GCGATG | 1 cut(s) | 2742 |
| BtrI | CACGTC | 1 cut(s) | 2095 |
| BtsCI | GGATG | 8 cut(s) | 117, 291, 505, 1498, 1594, 1833, 2721, 2749 |
| BtsIMutI | CAGTG | 1 cut(s) | 2051 |
| BtuMI | TCGCGA | 1 cut(s) | 2042 |
| BveI | ACCTGC | 1 cut(s) | 141 |
| Cfr10I | RCCGGY | 8 cut(s) | 179, 188, 520, 1609, 2103, 2169, 2762, 2884 |
| Cfr42I | CCGCGG | 2 cut(s) | 1843, 2841 |
| Cfr9I | CCCGGG | 5 cut(s) | 769, 2136, 2150, 2408, 2820 |
| ClaI | ATCGAT | 1 cut(s) | 2307 |
| CpoI | CGGWCCG | 1 cut(s) | 2765 |
| CsiI | ACCWGGT | 1 cut(s) | 440 |
| Csp6I | GTAC | 5 cut(s) | 69, 359, 1953, 2157, 2882 |
| CspI | CGGWCCG | 1 cut(s) | 2765 |
| CviQI | GTAC | 5 cut(s) | 69, 359, 1953, 2157, 2882 |
| DdeI | CTNAG | 3 cut(s) | 1756, 1805, 1853 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 421, 2964 |
| DriI | GACNNNNNGTC | 2 cut(s) | 965, 2603 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 421, 2964 |
| EaeI | YGGCCR | 8 cut(s) | 942, 1135, 1748, 1843, 1866, 2580, 2811, 2919 |
| EagI | CGGCCG | 2 cut(s) | 942, 2580 |
| Eam1104I | CTCTTC | 1 cut(s) | 422 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 965, 2603 |
| EarI | CTCTTC | 1 cut(s) | 422 |
| EciI | GGCGGA | 6 cut(s) | 507, 801, 1596, 1601, 2440, 2757 |
| Ecl136II | GAGCTC | 1 cut(s) | 2929 |
| EclXI | CGGCCG | 2 cut(s) | 942, 2580 |
| Eco130I | CCWWGG | 7 cut(s) | 1138, 1233, 1243, 1264, 1488, 2186, 2960 |
| Eco24I | GRGCYC | 4 cut(s) | 1528, 2121, 2145, 2931 |
| Eco31I | GGTCTC | 1 cut(s) | 1794 |
| Eco32I | GATATC | 1 cut(s) | 2291 |
| Eco47I | GGWCC | 8 cut(s) | 258, 836, 1414, 1986, 2474, 2765, 2789, 2957 |
| Eco52I | CGGCCG | 2 cut(s) | 942, 2580 |
| Eco53kI | GAGCTC | 1 cut(s) | 2929 |
| Eco57I | CTGAAG | 1 cut(s) | 318 |
| Eco91I | GGTNACC | 2 cut(s) | 977, 2615 |
| EcoICRI | GAGCTC | 1 cut(s) | 2929 |
| EcoO109I | RGGNCCY | 2 cut(s) | 836, 2474 |
| EcoO65I | GGTNACC | 2 cut(s) | 977, 2615 |
| EcoRI | GAATTC | 1 cut(s) | 1899 |
| EcoRII | CCWGG | 8 cut(s) | 440, 610, 732, 963, 1575, 1699, 2373, 2601 |
| EcoRV | GATATC | 1 cut(s) | 2291 |
| EcoT14I | CCWWGG | 7 cut(s) | 1138, 1233, 1243, 1264, 1488, 2186, 2960 |
| EcoT22I | ATGCAT | 1 cut(s) | 493 |
| EcoT38I | GRGCYC | 4 cut(s) | 1528, 2121, 2145, 2931 |
| ErhI | CCWWGG | 7 cut(s) | 1138, 1233, 1243, 1264, 1488, 2186, 2960 |
| Esp3I | CGTCTC | 3 cut(s) | 104, 411, 2837 |
| FaqI | GGGAC | 8 cut(s) | 147, 207, 792, 1469, 1873, 1925, 2111, 2431 |
| FauNDI | CATATG | 1 cut(s) | 464 |
| FblI | GTMKAC | 9 cut(s) | 387, 1092, 1176, 1229, 1260, 1302, 1390, 1462, 2852 |
| FokI | GGATG | 8 cut(s) | 124, 298, 512, 1505, 1601, 1820, 2728, 2756 |
| FriOI | GRGCYC | 4 cut(s) | 1528, 2121, 2145, 2931 |
| FspBI | CTAG | 7 cut(s) | 1038, 1362, 1374, 1550, 1818, 1905, 2676 |
| FspI | TGCGCA | 1 cut(s) | 107 |
| Hin1I | GRCGYC | 9 cut(s) | 416, 422, 738, 2037, 2124, 2247, 2379, 2846, 2915 |
| HpaI | GTTAAC | 1 cut(s) | 1792 |
| HphI | GGTGA | 1 cut(s) | 2003 |
| Hpy188I | TCNGA | 9 cut(s) | 285, 326, 334, 1439, 1540, 2003, 2070, 2743, 2970 |
| Hpy188III | TCNNGA | 8 cut(s) | 91, 317, 1432, 1508, 1724, 2041, 2703, 2947 |
| HpyAV | CCTTC | 7 cut(s) | 135, 293, 594, 908, 1683, 2122, 2546 |
| HpyCH4IV | ACGT | 9 cut(s) | 147, 422, 630, 790, 1938, 2037, 2094, 2317, 2429 |
| HpyCH4V | TGCA | 5 cut(s) | 250, 491, 661, 1745, 1877 |
| HpyF3I | CTNAG | 3 cut(s) | 1756, 1805, 1853 |
| HpySE526I | ACGT | 9 cut(s) | 147, 422, 630, 790, 1938, 2037, 2094, 2317, 2429 |
| Hsp92I | GRCGYC | 9 cut(s) | 416, 422, 738, 2037, 2124, 2247, 2379, 2846, 2915 |
| KroI | GCCGGC | 5 cut(s) | 179, 188, 520, 1609, 2103 |
| KroNI | GCCGGC | 5 cut(s) | 181, 190, 522, 1611, 2105 |
| KspAI | GTTAAC | 1 cut(s) | 1792 |
| KspI | CCGCGG | 2 cut(s) | 1843, 2841 |
| Lsp1109I | GCAGC | 5 cut(s) | 123, 363, 1345, 2014, 2882 |
| LweI | GCATC | 6 cut(s) | 60, 276, 1344, 1558, 2313, 2719 |
| MabI | ACCWGGT | 1 cut(s) | 440 |
| MaeI | CTAG | 7 cut(s) | 1038, 1362, 1374, 1550, 1818, 1905, 2676 |
| MaeII | ACGT | 9 cut(s) | 147, 422, 630, 790, 1938, 2037, 2094, 2317, 2429 |
| MaeIII | GTNAC | 8 cut(s) | 502, 739, 977, 1040, 1591, 2380, 2615, 2678 |
| MauBI | CGCGCGCG | 1 cut(s) | 2236 |
| MbiI | CCGCTC | 5 cut(s) | 914, 933, 2147, 2552, 2571 |
| MboII | GAAGA | 6 cut(s) | 305, 439, 1542, 1880, 2248, 2324 |
| MfeI | CAATTG | 1 cut(s) | 1878 |
| MhlI | GDGCHC | 9 cut(s) | 218, 607, 726, 1528, 1696, 2121, 2145, 2367, 2931 |
| MlsI | TGGCCA | 1 cut(s) | 1868 |
| MluCI | AATT | 9 cut(s) | 591, 656, 988, 1680, 1783, 1878, 1899, 2626, 2696 |
| MluI | ACGCGT | 2 cut(s) | 85, 355 |
| MluNI | TGGCCA | 1 cut(s) | 1868 |
| MlyI | GAGTC | 8 cut(s) | 508, 690, 1347, 1597, 1925, 2269, 2974, 2991 |
| MmeI | TCCRAC | 1 cut(s) | 2721 |
| Mox20I | TGGCCA | 1 cut(s) | 1868 |
| Mph1103I | ATGCAT | 1 cut(s) | 493 |
| MreI | CGCCGGCG | 1 cut(s) | 188 |
| MroNI | GCCGGC | 5 cut(s) | 179, 188, 520, 1609, 2103 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2086 |
| MscI | TGGCCA | 1 cut(s) | 1868 |
| MseI | TTAA | 9 cut(s) | 482, 585, 992, 1449, 1503, 1674, 1782, 1791, 2630 |
| MslI | CAYNNNNRTG | 8 cut(s) | 492, 1106, 1117, 1148, 1190, 1201, 1274, 1316 |
| Msp20I | TGGCCA | 1 cut(s) | 1868 |
| MspA1I | CMGCKG | 5 cut(s) | 376, 985, 1842, 2623, 2840 |
| MunI | CAATTG | 1 cut(s) | 1878 |
| Mva1269I | GAATGC | 1 cut(s) | 439 |
| MvaI | CCWGG | 8 cut(s) | 442, 612, 734, 965, 1577, 1701, 2375, 2603 |
| NaeI | GCCGGC | 5 cut(s) | 181, 190, 522, 1611, 2105 |
| NcoI | CCATGG | 3 cut(s) | 1138, 1233, 1264 |
| NdeI | CATATG | 1 cut(s) | 464 |
| NgoMIV | GCCGGC | 5 cut(s) | 179, 188, 520, 1609, 2103 |
| NheI | GCTAGC | 1 cut(s) | 1361 |
| NmeAIII | GCCGAG | 9 cut(s) | 743, 820, 970, 2100, 2259, 2274, 2384, 2458, 2608 |
| NmuCI | GTSAC | 2 cut(s) | 739, 2380 |
| NruI | TCGCGA | 1 cut(s) | 2042 |
| NsbI | TGCGCA | 1 cut(s) | 107 |
| NsiI | ATGCAT | 1 cut(s) | 493 |
| PaeI | GCATGC | 6 cut(s) | 1105, 1147, 1189, 1242, 1273, 1315 |
| PauI | GCGCGC | 6 cut(s) | 2207, 2234, 2236, 2873, 2875, 2904 |
| PctI | GAATGC | 1 cut(s) | 439 |
| PdiI | GCCGGC | 5 cut(s) | 181, 190, 522, 1611, 2105 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2086 |
| PfeI | GAWTC | 5 cut(s) | 94, 664, 1031, 1727, 2669 |
| Pfl23II | CGTACG | 1 cut(s) | 358 |
| PflFI | GACNNNGTC | 2 cut(s) | 1937, 2848 |
| PfoI | TCCNGGA | 1 cut(s) | 223 |
| Ple19I | CGATCG | 5 cut(s) | 329, 337, 863, 2775, 2861 |
| PleI | GAGTC | 8 cut(s) | 508, 689, 1347, 1597, 1924, 2269, 2973, 2990 |
| PpsI | GAGTC | 8 cut(s) | 508, 689, 1347, 1597, 1924, 2269, 2973, 2990 |
| PpuMI | RGGWCCY | 2 cut(s) | 836, 2474 |
| PshBI | ATTAAT | 1 cut(s) | 1503 |
| Psp124BI | GAGCTC | 1 cut(s) | 2931 |
| Psp1406I | AACGTT | 1 cut(s) | 147 |
| Psp5II | RGGWCCY | 2 cut(s) | 836, 2474 |
| Psp6I | CCWGG | 8 cut(s) | 440, 610, 732, 963, 1575, 1699, 2373, 2601 |
| PspEI | GGTNACC | 2 cut(s) | 977, 2615 |
| PspGI | CCWGG | 8 cut(s) | 440, 610, 732, 963, 1575, 1699, 2373, 2601 |
| PspLI | CGTACG | 1 cut(s) | 358 |
| PspPPI | RGGWCCY | 2 cut(s) | 836, 2474 |
| PsyI | GACNNNGTC | 2 cut(s) | 1937, 2848 |
| PteI | GCGCGC | 6 cut(s) | 2207, 2234, 2236, 2873, 2875, 2904 |
| PvuI | CGATCG | 5 cut(s) | 329, 337, 863, 2775, 2861 |
| RruI | TCGCGA | 1 cut(s) | 2042 |
| RsaI | GTAC | 5 cut(s) | 70, 360, 1954, 2158, 2883 |
| RsaNI | GTAC | 5 cut(s) | 69, 359, 1953, 2157, 2882 |
| RseI | CAYNNNNRTG | 8 cut(s) | 492, 1106, 1117, 1148, 1190, 1201, 1274, 1316 |
| Rsr2I | CGGWCCG | 1 cut(s) | 2765 |
| RsrII | CGGWCCG | 1 cut(s) | 2765 |
| SacI | GAGCTC | 1 cut(s) | 2931 |
| SacII | CCGCGG | 2 cut(s) | 1843, 2841 |
| SalI | GTCGAC | 9 cut(s) | 386, 1091, 1175, 1228, 1259, 1301, 1389, 1461, 2851 |
| SaqAI | TTAA | 9 cut(s) | 482, 585, 992, 1449, 1503, 1674, 1782, 1791, 2630 |
| SchI | GAGTC | 8 cut(s) | 508, 690, 1347, 1597, 1925, 2269, 2974, 2991 |
| SduI | GDGCHC | 9 cut(s) | 218, 607, 726, 1528, 1696, 2121, 2145, 2367, 2931 |
| SexAI | ACCWGGT | 1 cut(s) | 440 |
| SfaNI | GCATC | 6 cut(s) | 60, 276, 1344, 1558, 2313, 2719 |
| Sfr303I | CCGCGG | 2 cut(s) | 1843, 2841 |
| SgrAI | CRCCGGYG | 2 cut(s) | 188, 2169 |
| SgrBI | CCGCGG | 2 cut(s) | 1843, 2841 |
| SgrDI | CGTCGACG | 1 cut(s) | 2851 |
| SinI | GGWCC | 8 cut(s) | 258, 836, 1414, 1986, 2474, 2765, 2789, 2957 |
| SmaI | CCCGGG | 5 cut(s) | 771, 2138, 2152, 2410, 2822 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 492, 1106, 1117, 1148, 1190, 1201, 1274, 1316 |
| SphI | GCATGC | 6 cut(s) | 1105, 1147, 1189, 1242, 1273, 1315 |
| SrfI | GCCCGGGC | 1 cut(s) | 2822 |
| Sse9I | AATT | 9 cut(s) | 591, 656, 988, 1680, 1783, 1878, 1899, 2626, 2696 |
| SspMI | CTAG | 7 cut(s) | 1038, 1362, 1374, 1550, 1818, 1905, 2676 |
| SstI | GAGCTC | 1 cut(s) | 2931 |
| StyI | CCWWGG | 7 cut(s) | 1138, 1233, 1243, 1264, 1488, 2186, 2960 |
| TaiI | ACGT | 9 cut(s) | 150, 425, 633, 793, 1941, 2040, 2097, 2320, 2432 |
| TaqII | GACCGA | 2 cut(s) | 246, 2806 |
| TasI | AATT | 9 cut(s) | 591, 656, 988, 1680, 1783, 1878, 1899, 2626, 2696 |
| TatI | WGTACW | 1 cut(s) | 1952 |
| TfiI | GAWTC | 5 cut(s) | 94, 664, 1031, 1727, 2669 |
| Tru1I | TTAA | 9 cut(s) | 482, 585, 992, 1449, 1503, 1674, 1782, 1791, 2630 |
| Tru9I | TTAA | 9 cut(s) | 482, 585, 992, 1449, 1503, 1674, 1782, 1791, 2630 |
| TscAI | CASTG | 1 cut(s) | 2058 |
| TseFI | GTSAC | 2 cut(s) | 739, 2380 |
| TseI | GCWGC | 5 cut(s) | 136, 376, 1358, 2027, 2870 |
| Tsp45I | GTSAC | 2 cut(s) | 739, 2380 |
| TspDTI | ATGAA | 3 cut(s) | 68, 1489, 2325 |
| TspGWI | ACGGA | 8 cut(s) | 30, 260, 393, 612, 1701, 1777, 2301, 2970 |
| TspMI | CCCGGG | 5 cut(s) | 769, 2136, 2150, 2408, 2820 |
| TspRI | CASTG | 1 cut(s) | 2058 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1937, 2848 |
| VpaK11BI | GGWCC | 8 cut(s) | 258, 836, 1414, 1986, 2474, 2765, 2789, 2957 |
| VspI | ATTAAT | 1 cut(s) | 1503 |
| XapI | RAATTY | 3 cut(s) | 988, 1899, 2626 |
| XmaI | CCCGGG | 5 cut(s) | 769, 2136, 2150, 2408, 2820 |
| XmiI | GTMKAC | 9 cut(s) | 387, 1092, 1176, 1229, 1260, 1302, 1390, 1462, 2852 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2086 |
| XspI | CTAG | 7 cut(s) | 1038, 1362, 1374, 1550, 1818, 1905, 2676 |
| ZraI | GACGTC | 2 cut(s) | 423, 2038 |
| Zsp2I | ATGCAT | 1 cut(s) | 493 |