Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0001576

Physical Location & Seq

Genomic Coordinates Forward (+)

20591210 .. 20594681

Gene Structure 3472 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGTCTCGCTGCCACCACCCACGATCGTCATCACTGCAATCATCTCCACCTCCACCACCACACTATCATCACCACCATCTCAGTCCGCTCCGCTCCACTCCACTCCACCATCACATTTCAGCCATGGCGGAGCTCAAGCTCTCAGAGAGTCGAGACCTGACCCGAATAGAGCGCATAGGCGCACACTCCCACATCCGCGGCCTCGGCCTCGATTCTGCCCTAGAAGCCCGCGACGTCTCCCAAGGCATGGTGGGCCAGACTTCCGCCCGAAAGGCCGCTGGCGTCATTCTCCAGATGATCAAGGAAGGAAAAATCGCGGGTCGGGCTGTTCTTCTGGCGGGTCAGCCGGGAACCGGCAAGACCGCCATCGCCATGGGCATGGCGAAGTCGCTCGGCCTCGAAACCCCGTTCGCGATGATGGCCGGAAGCGAGCTCTTTTCTCTGGAGATGTCGAAGACCGAAGCCCTAATGCAAGCTTTTAGGAAAGCCATTGGGGTTAGAATCAAGGAAGAGACTGAGATCATCGAGGGCGAGGTCGTGGAGGTTCAAATTGACCGGCCTGCGGTGGCCGGAGCAGCTTCGAAGACGGGGAAATTGACGCTGAAGACAACGGAGATGGAGACTGTGTACGACTTGGGGGCCAAGATGATTGAGGCTTTGGGGAAGGAGAAGGTGCAGAGTGGGGATGTGATTGCCATCGATAAAGCTTCTGGGAAGATTACCAAGCTTGGTAGGTCATTTTCGAGGTCGAGGGACTACGATGCCATGGGACCGCAGGTTAAATTTATGCAGTGCCCGGACGGGGAGTTGCAGAAGCGCAAGGAGGTTGTGCATTGCGTCACACTTCATGAGATTGATGTCATCAACAGCAGAACACAGGGATTTCTGGCTCTCTTTACCGGTGATACTGGTGAAATCCGCTCAGAAGTGAGAGAACAAATTGACACAAAGGTAGCAGAGTGGAGGGAGGAAGGGAAGGCAGAAATTGTACCAGGTGTTCTCTTTATTGATGAGGTGCACATGCTTGACATTGAGTGCTTTTCATTTTTGAATCGTGCATTGGAGAATGAGATGGCTCCCATATTAGTTGTTGCTACCAACAGAGGAATCACTACAATCAGAGGCACAAATTATAAATCCCCTCATGGAATTCCTATTGATCTCCTTGATCGACTGCTTATTATCACCACCCAGCCTTACACAGAGGATGAAATTAGTAAGATTCTGAACATCAGATGCCAGGAAGAAGAAGTCGAGATGTCCGAAGAAGCAAAGCATTTGTTGACCAAGATTGGTGTTGATGCATCCTTGAGATATGCTATACATCTCATAACAGCTTCTGCGTTGGCATGCCAAAAGCGAAAGGGAAATATTGTGGAGATGGAGGATATTAACCGAGTTTACCATCTGTTTTTGGATGTGAAGAGATCAACACAATACTTGATGGAGTATCAGAGTCAGTACATGTTCAGCGAGGAAGGTGACGACGATGATACCAATGCCATGCAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000812 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0031974 GO:0031981 GO:0032991 GO:0034708 GO:0035097 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0044665 GO:0070013 GO:0070603 GO:0071339 GO:0097346 GO:1902494 GO:1904949 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP49

Protein Analysis

505

Amino Acids

55.87

Weight (kDa)

5.98

Isoelectric Point (pI)

51.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP49	PF06068	58 - 402	2.9e-166	TIP49 P-loop domain
DnaB_C	PF03796	102 - 234	2.5e-07	DnaB-like helicase C terminal domain
AAA	PF00004	110 - 162	5.1e-06	ATPase family associated with various cellular activities (AAA)
TIP49_C	PF17856	408 - 473	6.1e-26	TIP49 AAA-lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49830 AT5G67630
fragaria_vesca	FvH4_1g17590
malus_domestica	MD02G1184700.v1.1 MD08G1213300.v1.1
prunus_persica	Prupe.1G544700_v2.0.a1
pyrus_communis	pycom02g14980 pycom15g25960
rosa_chinensis	RchiOBHm_Chr2g0107901 RchiOBHm_Chr6g0265871 RchiOBHm_Chr6g0265881 RchiOBHm_Chr6g0265891 RchiOBHm_Chr6g0265911
rosa_laevigata	RLG00000014147 RLG00000014151 RLG00000014152 RLG00000017626 RLG00000030880
rosa_multiflora	Rmu_sc0000149.1_g000017 Rmu_sc0001484.1_g000033 Rmu_sc0006952.1_g000010 Rmu_sc0006952.1_g000012 Rmu_sc0006952.1_g000034 Rmu_sc0013320.1_g000004 Rmu_sc0013320.1_g000009
rosa_roxburghii	Rroxscaffold_2G00135810 Rroxscaffold_7G00202230 Rroxscaffold_7G00202270 Rroxscaffold_7G00202280 Rroxscaffold_7G00202290
rosa_rugosa	Rorug02G0148600 Rorug02G0148600 Rorug06G0021100 Rorug06G0021100 Rorug06G0021300
rosa_samantha	Rh2AG197900 Rh2BG210800 Rh2CG202600 Rh2DG205600 Rh6BG142600 Rh6BG142700 Rh6CG139200 Rh6CG139300 Rh6DG126800 Rh6DG126900
rosa_wichuraiana	Rw0G009670 Rw0G009680 Rw2G015700 Rw6G012330 Rw6G012340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1134
AatII	GACGTC	1 cut(s)	237
Acc36I	ACCTGC	1 cut(s)	766
AccB7I	CCANNNNNTGG	1 cut(s)	247
AccBSI	CCGCTC	3 cut(s)	88, 93, 921
AccII	CGCG	4 cut(s)	198, 231, 317, 413
AcoI	YGGCCR	2 cut(s)	420, 567
AcsI	RAATTY	2 cut(s)	782, 1149
AcuI	CTGAAG	1 cut(s)	623
AcyI	GRCGYC	2 cut(s)	234, 282
AfaI	GTAC	3 cut(s)	629, 990, 1463
AfiI	CCNNNNNNNGG	4 cut(s)	247, 353, 562, 802
AflIII	ACRYGT	1 cut(s)	1464
AgeI	ACCGGT	1 cut(s)	899
AgsI	TTSAA	2 cut(s)	548, 1051
AjnI	CCWGG	2 cut(s)	991, 1239
AjuI	GAANNNNNNNTTGG	2 cut(s)	1043, 1075
AluBI	AGCT	8 cut(s)	133, 139, 433, 476, 578, 707, 727, 1337
AluI	AGCT	8 cut(s)	133, 139, 433, 476, 578, 707, 727, 1337
Alw21I	GWGCWC	3 cut(s)	135, 435, 1020
Alw26I	GTCTC	5 cut(s)	9, 147, 241, 506, 614
Alw44I	GTGCAC	1 cut(s)	1016
AlwNI	CAGNNNCTG	1 cut(s)	1340
AoxI	GGCC	9 cut(s)	199, 205, 253, 273, 394, 420, 557, 567, 639
ApaLI	GTGCAC	1 cut(s)	1016
ApeKI	GCWGC	2 cut(s)	9, 575
ApoI	RAATTY	2 cut(s)	782, 1149
AsiGI	ACCGGT	1 cut(s)	899
AspLEI	GCGC	3 cut(s)	174, 182, 819
AspS9I	GGNCC	3 cut(s)	253, 639, 770
AsuC2I	CCSGG	2 cut(s)	348, 797
AsuHPI	GGTGA	5 cut(s)	62, 914, 923, 1177, 1493
AsuII	TTCGAA	1 cut(s)	581
AvaII	GGWCC	1 cut(s)	770
BaeGI	GKGCMC	2 cut(s)	797, 1020
BanII	GRGCYC	2 cut(s)	135, 435
BbsI	GAAGAC	3 cut(s)	461, 590, 611
Bbv12I	GWGCWC	3 cut(s)	135, 435, 1020
BbvI	GCAGC	1 cut(s)	587
BciT130I	CCWGG	2 cut(s)	993, 1241
BclI	TGATCA	1 cut(s)	297
BcnI	CCSGG	2 cut(s)	348, 797
BcoDI	GTCTC	5 cut(s)	9, 147, 241, 506, 614
BfaI	CTAG	1 cut(s)	221
BfuAI	ACCTGC	1 cut(s)	766
BglI	GCCNNNNNGGC	1 cut(s)	272
BisI	GCNGC	4 cut(s)	10, 199, 276, 576
BlsI	GCNGC	4 cut(s)	11, 200, 277, 577
Bme1390I	CCNGG	4 cut(s)	348, 797, 993, 1241
Bme18I	GGWCC	1 cut(s)	770
BmgT120I	GGNCC	3 cut(s)	253, 639, 770
BmiI	GGNNCC	4 cut(s)	352, 640, 771, 1077
BmrFI	CCNGG	4 cut(s)	348, 797, 993, 1241
BmsI	GCATC	4 cut(s)	751, 1226, 1291, 1313
BpiI	GAAGAC	3 cut(s)	461, 590, 611
BpmI	CTGGAG	2 cut(s)	275, 464
Bpu14I	TTCGAA	1 cut(s)	581
BpuEI	CTTGAG	2 cut(s)	119, 1330
BpuMI	CCSGG	2 cut(s)	348, 797
Bsa29I	ATCGAT	1 cut(s)	699
BsaBI	GATNNNNATC	2 cut(s)	28, 695
BsaHI	GRCGYC	2 cut(s)	234, 282
BsaI	GGTCTC	1 cut(s)	147
BsaJI	CCNNGG	6 cut(s)	123, 196, 202, 241, 372, 765
BsaWI	WCCGGW	1 cut(s)	899
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	4 cut(s)	247, 353, 562, 802
Bse118I	RCCGGY	3 cut(s)	353, 555, 899
Bse1I	ACTGG	1 cut(s)	913
Bse3DI	GCAATG	1 cut(s)	832
Bse8I	GATNNNNATC	2 cut(s)	28, 695
BseBI	CCWGG	2 cut(s)	993, 1241
BseCI	ATCGAT	1 cut(s)	699
BseDI	CCNNGG	6 cut(s)	123, 196, 202, 241, 372, 765
BseGI	GGATG	5 cut(s)	192, 691, 1213, 1304, 1423
BseJI	GATNNNNATC	2 cut(s)	28, 695
BseLI	CCNNNNNNNGG	4 cut(s)	247, 353, 562, 802
BseMI	GCAATG	1 cut(s)	832
BseMII	CTCAG	4 cut(s)	94, 156, 507, 936
BseNI	ACTGG	1 cut(s)	913
BseSI	GKGCMC	2 cut(s)	797, 1020
BseXI	GCAGC	1 cut(s)	587
BseYI	CCCAGC	1 cut(s)	1191
BsgI	GTGCAG	1 cut(s)	695
Bsh1236I	CGCG	4 cut(s)	198, 231, 317, 413
Bsh1285I	CGRYCG	1 cut(s)	26
BshFI	GGCC	9 cut(s)	201, 207, 255, 275, 396, 422, 559, 569, 641
BshTI	ACCGGT	1 cut(s)	899
BshVI	ATCGAT	1 cut(s)	699
BsiEI	CGRYCG	1 cut(s)	26
BsiHKAI	GWGCWC	3 cut(s)	135, 435, 1020
BsiSI	CCGG	7 cut(s)	347, 354, 423, 556, 570, 797, 900
BslFI	GGGAC	2 cut(s)	767, 783
BslI	CCNNNNNNNGG	4 cut(s)	247, 353, 562, 802
BsmAI	GTCTC	5 cut(s)	9, 147, 241, 506, 614
BsmBI	CGTCTC	1 cut(s)	241
BsmFI	GGGAC	2 cut(s)	767, 783
BsnI	GGCC	9 cut(s)	201, 207, 255, 275, 396, 422, 559, 569, 641
Bso31I	GGTCTC	1 cut(s)	147
Bsp119I	TTCGAA	1 cut(s)	581
Bsp1286I	GDGCHC	4 cut(s)	135, 435, 797, 1020
Bsp143I	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
Bsp19I	CCATGG	3 cut(s)	123, 372, 765
Bsp68I	TCGCGA	1 cut(s)	413
BspANI	GGCC	9 cut(s)	201, 207, 255, 275, 396, 422, 559, 569, 641
BspCNI	CTCAG	4 cut(s)	93, 155, 508, 935
BspDI	ATCGAT	1 cut(s)	699
BspFNI	CGCG	4 cut(s)	198, 231, 317, 413
BspHI	TCATGA	1 cut(s)	847
BspLI	GGNNCC	4 cut(s)	352, 640, 771, 1077
BspMI	ACCTGC	1 cut(s)	766
BspT104I	TTCGAA	1 cut(s)	581
BspTNI	GGTCTC	1 cut(s)	147
BsrBI	CCGCTC	3 cut(s)	88, 93, 921
BsrDI	GCAATG	1 cut(s)	832
BsrFI	RCCGGY	3 cut(s)	353, 555, 899
BsrI	ACTGG	1 cut(s)	913
BssAI	RCCGGY	3 cut(s)	353, 555, 899
BssECI	CCNNGG	6 cut(s)	123, 196, 202, 241, 372, 765
BssMI	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
BssNI	GRCGYC	2 cut(s)	234, 282
BssT1I	CCWWGG	4 cut(s)	123, 241, 372, 765
Bst2UI	CCWGG	2 cut(s)	993, 1241
Bst4CI	ACNGT	1 cut(s)	625
Bst6I	CTCTTC	2 cut(s)	504, 1418
BstACI	GRCGYC	2 cut(s)	234, 282
BstBI	TTCGAA	1 cut(s)	581
BstC8I	GCNNGC	6 cut(s)	229, 280, 431, 474, 561, 1351
BstDEI	CTNAG	4 cut(s)	80, 142, 516, 922
BstDSI	CCRYGG	4 cut(s)	123, 196, 372, 765
BstF5I	GGATG	5 cut(s)	192, 691, 1213, 1304, 1423
BstFNI	CGCG	4 cut(s)	198, 231, 317, 413
BstHHI	GCGC	3 cut(s)	174, 182, 819
BstKTI	GATC	6 cut(s)	26, 300, 522, 1162, 1171, 1430
BstMAI	GTCTC	5 cut(s)	9, 147, 241, 506, 614
BstMBI	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
BstMCI	CGRYCG	1 cut(s)	26
BstMWI	GCNNNNNNNGC	7 cut(s)	204, 224, 252, 272, 323, 419, 575
BstNI	CCWGG	2 cut(s)	993, 1241
BstNSI	RCATGY	3 cut(s)	1024, 1353, 1468
BstSCI	CCNGG	4 cut(s)	346, 795, 991, 1239
BstSLI	GKGCMC	2 cut(s)	797, 1020
BstUI	CGCG	4 cut(s)	198, 231, 317, 413
BstV1I	GCAGC	1 cut(s)	587
BstV2I	GAAGAC	3 cut(s)	461, 590, 611
BstXI	CCANNNNNNTGG	2 cut(s)	373, 379
Bsu15I	ATCGAT	1 cut(s)	699
BsuRI	GGCC	9 cut(s)	201, 207, 255, 275, 396, 422, 559, 569, 641
BsuTUI	ATCGAT	1 cut(s)	699
BtgI	CCRYGG	4 cut(s)	123, 196, 372, 765
BtgZI	GCGATG	2 cut(s)	352, 428
BtsCI	GGATG	5 cut(s)	192, 691, 1213, 1304, 1423
BtsI	GCAGTG	2 cut(s)	32, 797
BtsIMutI	CAGTG	2 cut(s)	32, 797
BtuMI	TCGCGA	1 cut(s)	413
BveI	ACCTGC	1 cut(s)	766
Cac8I	GCNNGC	6 cut(s)	229, 280, 431, 474, 561, 1351
CaiI	CAGNNNCTG	1 cut(s)	1340
CciI	TCATGA	1 cut(s)	847
CfoI	GCGC	3 cut(s)	174, 182, 819
Cfr10I	RCCGGY	3 cut(s)	353, 555, 899
Cfr13I	GGNCC	3 cut(s)	253, 639, 770
Cfr42I	CCGCGG	1 cut(s)	199
ClaI	ATCGAT	1 cut(s)	699
CseI	GACGC	3 cut(s)	271, 607, 826
CsiI	ACCWGGT	1 cut(s)	991
Csp6I	GTAC	3 cut(s)	628, 989, 1462
CspAI	ACCGGT	1 cut(s)	899
CviQI	GTAC	3 cut(s)	628, 989, 1462
DdeI	CTNAG	4 cut(s)	80, 142, 516, 922
DpnI	GATC	6 cut(s)	25, 299, 521, 1161, 1170, 1429
DpnII	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
EaeI	YGGCCR	2 cut(s)	420, 567
Eam1104I	CTCTTC	2 cut(s)	504, 1418
EarI	CTCTTC	2 cut(s)	504, 1418
EciI	GGCGGA	2 cut(s)	143, 253
Ecl136II	GAGCTC	2 cut(s)	133, 433
Eco130I	CCWWGG	4 cut(s)	123, 241, 372, 765
Eco24I	GRGCYC	2 cut(s)	135, 435
Eco31I	GGTCTC	1 cut(s)	147
Eco47I	GGWCC	1 cut(s)	770
Eco53kI	GAGCTC	2 cut(s)	133, 433
Eco57I	CTGAAG	1 cut(s)	623
EcoICRI	GAGCTC	2 cut(s)	133, 433
EcoRI	GAATTC	1 cut(s)	1149
EcoRII	CCWGG	2 cut(s)	991, 1239
EcoT14I	CCWWGG	4 cut(s)	123, 241, 372, 765
EcoT22I	ATGCAT	1 cut(s)	1306
EcoT38I	GRGCYC	2 cut(s)	135, 435
ErhI	CCWWGG	4 cut(s)	123, 241, 372, 765
Esp3I	CGTCTC	1 cut(s)	241
FaqI	GGGAC	2 cut(s)	767, 783
FauI	CCCGC	3 cut(s)	236, 310, 331
FbaI	TGATCA	1 cut(s)	297
Fnu4HI	GCNGC	4 cut(s)	10, 199, 276, 576
FokI	GGATG	5 cut(s)	179, 698, 1220, 1291, 1430
FriOI	GRGCYC	2 cut(s)	135, 435
Fsp4HI	GCNGC	4 cut(s)	10, 199, 276, 576
FspBI	CTAG	1 cut(s)	221
GlaI	GCGC	3 cut(s)	173, 181, 818
GluI	GCNGC	4 cut(s)	10, 199, 276, 576
GsaI	CCCAGC	1 cut(s)	1195
GsuI	CTGGAG	2 cut(s)	275, 464
HaeIII	GGCC	9 cut(s)	201, 207, 255, 275, 396, 422, 559, 569, 641
HapII	CCGG	7 cut(s)	347, 354, 423, 556, 570, 797, 900
HgaI	GACGC	3 cut(s)	271, 607, 826
HhaI	GCGC	3 cut(s)	174, 182, 819
Hin1I	GRCGYC	2 cut(s)	234, 282
Hin6I	GCGC	3 cut(s)	172, 180, 817
HinP1I	GCGC	3 cut(s)	172, 180, 817
HincII	GTYRAC	1 cut(s)	1284
HindII	GTYRAC	1 cut(s)	1284
HindIII	AAGCTT	3 cut(s)	474, 705, 725
HinfI	GANTC	7 cut(s)	148, 212, 501, 1051, 1107, 1222, 1456
HpaII	CCGG	7 cut(s)	347, 354, 423, 556, 570, 797, 900
HphI	GGTGA	5 cut(s)	62, 914, 923, 1177, 1493
Hpy166II	GTNNAC	4 cut(s)	628, 1018, 1284, 1402
Hpy188I	TCNGA	7 cut(s)	145, 925, 1121, 1227, 1235, 1264, 1455
Hpy188III	TCNNGA	7 cut(s)	152, 292, 412, 443, 848, 1255, 1512
Hpy8I	GTNNAC	4 cut(s)	628, 1018, 1284, 1402
Hpy99I	CGWCG	2 cut(s)	236, 1490
HpyAV	CCTTC	6 cut(s)	299, 658, 664, 965, 970, 1472
HpyCH4III	ACNGT	1 cut(s)	625
HpyCH4IV	ACGT	1 cut(s)	234
HpyF10VI	GCNNNNNNNGC	7 cut(s)	204, 224, 252, 272, 323, 419, 575
HpyF3I	CTNAG	4 cut(s)	80, 142, 516, 922
HpySE526I	ACGT	1 cut(s)	234
Hsp92I	GRCGYC	2 cut(s)	234, 282
HspAI	GCGC	3 cut(s)	172, 180, 817
Ksp22I	TGATCA	1 cut(s)	297
KspI	CCGCGG	1 cut(s)	199
Kzo9I	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
LmnI	GCTCC	5 cut(s)	93, 98, 130, 572, 1081
Lsp1109I	GCAGC	1 cut(s)	587
LweI	GCATC	4 cut(s)	751, 1226, 1291, 1313
MabI	ACCWGGT	1 cut(s)	991
MaeI	CTAG	1 cut(s)	221
MaeII	ACGT	1 cut(s)	234
MaeIII	GTNAC	2 cut(s)	838, 1481
MalI	GATC	6 cut(s)	25, 299, 521, 1161, 1170, 1429
MbiI	CCGCTC	3 cut(s)	88, 93, 921
MboI	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
MhlI	GDGCHC	4 cut(s)	135, 435, 797, 1020
MluCI	AATT	8 cut(s)	549, 593, 782, 939, 984, 1129, 1149, 1212
MlyI	GAGTC	2 cut(s)	157, 1465
Mph1103I	ATGCAT	1 cut(s)	1306
MseI	TTAA	2 cut(s)	780, 1392
MslI	CAYNNNNRTG	2 cut(s)	371, 377
MspA1I	CMGCKG	2 cut(s)	198, 278
MspI	CCGG	7 cut(s)	347, 354, 423, 556, 570, 797, 900
MspR9I	CCNGG	4 cut(s)	348, 797, 993, 1241
MvaI	CCWGG	2 cut(s)	993, 1241
MvnI	CGCG	4 cut(s)	198, 231, 317, 413
MwoI	GCNNNNNNNGC	7 cut(s)	204, 224, 252, 272, 323, 419, 575
NciI	CCSGG	2 cut(s)	348, 797
NcoI	CCATGG	3 cut(s)	123, 372, 765
NdeII	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
NlaIV	GGNNCC	4 cut(s)	352, 640, 771, 1077
NmeAIII	GCCGAG	2 cut(s)	183, 372
NmuCI	GTSAC	2 cut(s)	838, 1481
NruI	TCGCGA	1 cut(s)	413
NsiI	ATGCAT	1 cut(s)	1306
NspI	RCATGY	3 cut(s)	1024, 1353, 1468
NspV	TTCGAA	1 cut(s)	581
PaeI	GCATGC	1 cut(s)	1353
PagI	TCATGA	1 cut(s)	847
PciI	ACATGT	1 cut(s)	1464
PcsI	WCGNNNNNNNCGW	1 cut(s)	1260
PfeI	GAWTC	5 cut(s)	212, 501, 1051, 1107, 1222
PflMI	CCANNNNNTGG	1 cut(s)	247
PinAI	ACCGGT	1 cut(s)	899
PkrI	GCNGC	4 cut(s)	11, 200, 277, 577
Ple19I	CGATCG	1 cut(s)	26
PleI	GAGTC	2 cut(s)	156, 1464
PpsI	GAGTC	2 cut(s)	156, 1464
PscI	ACATGT	1 cut(s)	1464
PsiI	TTATAA	1 cut(s)	1134
Psp124BI	GAGCTC	2 cut(s)	135, 435
Psp6I	CCWGG	2 cut(s)	991, 1239
PspFI	CCCAGC	1 cut(s)	1191
PspGI	CCWGG	2 cut(s)	991, 1239
PspN4I	GGNNCC	4 cut(s)	352, 640, 771, 1077
PspPI	GGNCC	3 cut(s)	253, 639, 770
PsrI	GAACNNNNNNTAC	2 cut(s)	981, 1013
PstNI	CAGNNNCTG	1 cut(s)	1340
PvuI	CGATCG	1 cut(s)	26
RruI	TCGCGA	1 cut(s)	413
RsaI	GTAC	3 cut(s)	629, 990, 1463
RsaNI	GTAC	3 cut(s)	628, 989, 1462
RseI	CAYNNNNRTG	2 cut(s)	371, 377
SacI	GAGCTC	2 cut(s)	135, 435
SacII	CCGCGG	1 cut(s)	199
SaqAI	TTAA	2 cut(s)	780, 1392
SatI	GCNGC	4 cut(s)	10, 199, 276, 576
Sau3AI	GATC	6 cut(s)	23, 297, 519, 1159, 1168, 1427
Sau96I	GGNCC	3 cut(s)	253, 639, 770
SchI	GAGTC	2 cut(s)	157, 1465
ScrFI	CCNGG	4 cut(s)	348, 797, 993, 1241
SduI	GDGCHC	4 cut(s)	135, 435, 797, 1020
SexAI	ACCWGGT	1 cut(s)	991
SfaNI	GCATC	4 cut(s)	751, 1226, 1291, 1313
Sfr303I	CCGCGG	1 cut(s)	199
SfuI	TTCGAA	1 cut(s)	581
SgrBI	CCGCGG	1 cut(s)	199
SinI	GGWCC	1 cut(s)	770
SmiMI	CAYNNNNRTG	2 cut(s)	371, 377
SmlI	CTYRAG	2 cut(s)	134, 1309
SmoI	CTYRAG	2 cut(s)	134, 1309
SphI	GCATGC	1 cut(s)	1353
Sse9I	AATT	8 cut(s)	549, 593, 782, 939, 984, 1129, 1149, 1212
SspI	AATATT	1 cut(s)	1372
SspMI	CTAG	1 cut(s)	221
SstI	GAGCTC	2 cut(s)	135, 435
StyD4I	CCNGG	4 cut(s)	346, 795, 991, 1239
StyI	CCWWGG	4 cut(s)	123, 241, 372, 765
TaaI	ACNGT	1 cut(s)	625
TaiI	ACGT	1 cut(s)	237
TaqII	GACCGA	1 cut(s)	473
TasI	AATT	8 cut(s)	549, 593, 782, 939, 984, 1129, 1149, 1212
TatI	WGTACW	1 cut(s)	1461
TauI	GCSGC	2 cut(s)	201, 278
TfiI	GAWTC	5 cut(s)	212, 501, 1051, 1107, 1222
Tru1I	TTAA	2 cut(s)	780, 1392
Tru9I	TTAA	2 cut(s)	780, 1392
TscAI	CASTG	2 cut(s)	39, 797
TseFI	GTSAC	2 cut(s)	838, 1481
TseI	GCWGC	2 cut(s)	9, 575
Tsp45I	GTSAC	2 cut(s)	838, 1481
TspDTI	ATGAA	3 cut(s)	836, 1032, 1224
TspGWI	ACGGA	1 cut(s)	626
TspRI	CASTG	2 cut(s)	39, 797
Van91I	CCANNNNNTGG	1 cut(s)	247
VneI	GTGCAC	1 cut(s)	1016
VpaK11BI	GGWCC	1 cut(s)	770
XapI	RAATTY	2 cut(s)	782, 1149
XceI	RCATGY	3 cut(s)	1024, 1353, 1468
XspI	CTAG	1 cut(s)	221
ZraI	GACGTC	1 cut(s)	235
Zsp2I	ATGCAT	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.