Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1032, 1347 |
| AciI | CCGC | 2 cut(s) | 483, 748 |
| AclWI | GGATC | 1 cut(s) | 1112 |
| AcsI | RAATTY | 2 cut(s) | 430, 769 |
| AcuI | CTGAAG | 2 cut(s) | 317, 1103 |
| AcyI | GRCGYC | 1 cut(s) | 1020 |
| AfaI | GTAC | 7 cut(s) | 216, 349, 732, 814, 1088, 1231, 1503 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 682, 792, 1174, 1232 |
| AflIII | ACRYGT | 1 cut(s) | 504 |
| AgsI | TTSAA | 7 cut(s) | 668, 721, 808, 1047, 1190, 1256, 1493 |
| AjnI | CCWGG | 1 cut(s) | 56 |
| AluBI | AGCT | 5 cut(s) | 956, 1028, 1351, 1489, 1624 |
| AluI | AGCT | 5 cut(s) | 956, 1028, 1351, 1489, 1624 |
| Alw26I | GTCTC | 2 cut(s) | 602, 756 |
| AlwI | GGATC | 1 cut(s) | 1112 |
| AoxI | GGCC | 2 cut(s) | 46, 282 |
| ApaI | GGGCCC | 2 cut(s) | 50, 286 |
| ApeKI | GCWGC | 7 cut(s) | 28, 438, 764, 1286, 1486, 1621, 1624 |
| ApoI | RAATTY | 2 cut(s) | 430, 769 |
| AseI | ATTAAT | 1 cut(s) | 1464 |
| AsiSI | GCGATCGC | 1 cut(s) | 35 |
| AspS9I | GGNCC | 5 cut(s) | 46, 47, 282, 283, 1274 |
| AsuC2I | CCSGG | 2 cut(s) | 1168, 1617 |
| AsuHPI | GGTGA | 2 cut(s) | 481, 1633 |
| AvaII | GGWCC | 1 cut(s) | 1274 |
| BaeGI | GKGCMC | 3 cut(s) | 50, 286, 586 |
| BanII | GRGCYC | 2 cut(s) | 50, 286 |
| BauI | CACGAG | 1 cut(s) | 585 |
| BbsI | GAAGAC | 1 cut(s) | 1004 |
| BbvI | GCAGC | 7 cut(s) | 15, 450, 751, 1273, 1498, 1611, 1633 |
| BccI | CCATC | 3 cut(s) | 58, 834, 893 |
| BciT130I | CCWGG | 1 cut(s) | 58 |
| BclI | TGATCA | 1 cut(s) | 190 |
| BcnI | CCSGG | 2 cut(s) | 1168, 1617 |
| BcoDI | GTCTC | 2 cut(s) | 602, 756 |
| BfaI | CTAG | 1 cut(s) | 1371 |
| BisI | GCNGC | 7 cut(s) | 29, 439, 765, 1287, 1487, 1622, 1625 |
| BlpI | GCTNAGC | 1 cut(s) | 38 |
| BlsI | GCNGC | 7 cut(s) | 30, 440, 766, 1288, 1488, 1623, 1626 |
| BmcAI | AGTACT | 2 cut(s) | 1088, 1503 |
| Bme1390I | CCNGG | 3 cut(s) | 58, 1168, 1617 |
| Bme18I | GGWCC | 1 cut(s) | 1274 |
| BmgT120I | GGNCC | 5 cut(s) | 46, 47, 282, 283, 1274 |
| BmiI | GGNNCC | 6 cut(s) | 47, 48, 234, 249, 284, 285 |
| BmrFI | CCNGG | 3 cut(s) | 58, 1168, 1617 |
| BmrI | ACTGGG | 1 cut(s) | 1221 |
| BmsI | GCATC | 6 cut(s) | 438, 549, 961, 1141, 1171, 1313 |
| BmuI | ACTGGG | 1 cut(s) | 1221 |
| BpiI | GAAGAC | 1 cut(s) | 1004 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 38 |
| BpuMI | CCSGG | 2 cut(s) | 1168, 1617 |
| Bsa29I | ATCGAT | 1 cut(s) | 617 |
| BsaAI | YACGTR | 2 cut(s) | 507, 819 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1295 |
| BsaHI | GRCGYC | 1 cut(s) | 1020 |
| BsaI | GGTCTC | 2 cut(s) | 602, 756 |
| BsaJI | CCNNGG | 2 cut(s) | 657, 1616 |
| BsaWI | WCCGGW | 1 cut(s) | 1232 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 943, 973 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 682, 792, 1174, 1232 |
| Bse1I | ACTGG | 3 cut(s) | 212, 1227, 1677 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1295 |
| BseBI | CCWGG | 1 cut(s) | 58 |
| BseCI | ATCGAT | 1 cut(s) | 617 |
| BseDI | CCNNGG | 2 cut(s) | 657, 1616 |
| BseGI | GGATG | 4 cut(s) | 50, 313, 845, 1328 |
| BseJI | GATNNNNATC | 1 cut(s) | 1295 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 682, 792, 1174, 1232 |
| BseMII | CTCAG | 3 cut(s) | 52, 120, 702 |
| BseNI | ACTGG | 3 cut(s) | 212, 1227, 1677 |
| BseSI | GKGCMC | 3 cut(s) | 50, 286, 586 |
| BseXI | GCAGC | 7 cut(s) | 15, 450, 751, 1273, 1498, 1611, 1633 |
| BsgI | GTGCAG | 2 cut(s) | 1518, 1544 |
| Bsh1285I | CGRYCG | 1 cut(s) | 35 |
| BshFI | GGCC | 2 cut(s) | 48, 284 |
| BshVI | ATCGAT | 1 cut(s) | 617 |
| BsiEI | CGRYCG | 1 cut(s) | 35 |
| BsiSI | CCGG | 5 cut(s) | 305, 1168, 1233, 1616, 1628 |
| BslFI | GGGAC | 2 cut(s) | 582, 894 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 682, 792, 1174, 1232 |
| BsmAI | GTCTC | 2 cut(s) | 602, 756 |
| BsmFI | GGGAC | 2 cut(s) | 582, 894 |
| BsnI | GGCC | 2 cut(s) | 48, 284 |
| Bso31I | GGTCTC | 2 cut(s) | 602, 756 |
| Bsp120I | GGGCCC | 2 cut(s) | 46, 282 |
| Bsp1286I | GDGCHC | 3 cut(s) | 50, 286, 586 |
| Bsp1407I | TGTACA | 1 cut(s) | 730 |
| Bsp143I | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 38 |
| BspACI | CCGC | 2 cut(s) | 483, 748 |
| BspANI | GGCC | 2 cut(s) | 48, 284 |
| BspCNI | CTCAG | 3 cut(s) | 51, 119, 703 |
| BspDI | ATCGAT | 1 cut(s) | 617 |
| BspLI | GGNNCC | 6 cut(s) | 47, 48, 234, 249, 284, 285 |
| BspPI | GGATC | 1 cut(s) | 1112 |
| BspTNI | GGTCTC | 2 cut(s) | 602, 756 |
| BsrGI | TGTACA | 1 cut(s) | 730 |
| BsrI | ACTGG | 3 cut(s) | 212, 1227, 1677 |
| BssECI | CCNNGG | 2 cut(s) | 657, 1616 |
| BssMI | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| BssNI | GRCGYC | 1 cut(s) | 1020 |
| BssSI | CACGAG | 1 cut(s) | 585 |
| BssT1I | CCWWGG | 1 cut(s) | 657 |
| Bst2BI | CACGAG | 1 cut(s) | 585 |
| Bst2UI | CCWGG | 1 cut(s) | 58 |
| Bst4CI | ACNGT | 6 cut(s) | 14, 146, 293, 735, 804, 1274 |
| Bst6I | CTCTTC | 2 cut(s) | 850, 1509 |
| BstACI | GRCGYC | 1 cut(s) | 1020 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 28, 568 |
| BstAUI | TGTACA | 1 cut(s) | 730 |
| BstBAI | YACGTR | 2 cut(s) | 507, 819 |
| BstC8I | GCNNGC | 3 cut(s) | 366, 483, 746 |
| BstDEI | CTNAG | 3 cut(s) | 38, 106, 711 |
| BstF5I | GGATG | 4 cut(s) | 50, 313, 845, 1328 |
| BstKTI | GATC | 5 cut(s) | 35, 153, 193, 1120, 1299 |
| BstMAI | GTCTC | 2 cut(s) | 602, 756 |
| BstMBI | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| BstMCI | CGRYCG | 1 cut(s) | 35 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 28, 34, 116, 568, 1034 |
| BstNI | CCWGG | 1 cut(s) | 58 |
| BstNSI | RCATGY | 1 cut(s) | 368 |
| BstSCI | CCNGG | 3 cut(s) | 56, 1166, 1615 |
| BstSLI | GKGCMC | 3 cut(s) | 50, 286, 586 |
| BstSNI | TACGTA | 1 cut(s) | 819 |
| BstV1I | GCAGC | 7 cut(s) | 15, 450, 751, 1273, 1498, 1611, 1633 |
| BstV2I | GAAGAC | 1 cut(s) | 1004 |
| Bsu15I | ATCGAT | 1 cut(s) | 617 |
| BsuRI | GGCC | 2 cut(s) | 48, 284 |
| BsuTUI | ATCGAT | 1 cut(s) | 617 |
| BtgZI | GCGATG | 2 cut(s) | 461, 1304 |
| BtsCI | GGATG | 4 cut(s) | 50, 313, 845, 1328 |
| BtsIMutI | CAGTG | 1 cut(s) | 740 |
| Cac8I | GCNNGC | 3 cut(s) | 366, 483, 746 |
| Cfr13I | GGNCC | 5 cut(s) | 46, 47, 282, 283, 1274 |
| ClaI | ATCGAT | 1 cut(s) | 617 |
| CseI | GACGC | 1 cut(s) | 1028 |
| CsiI | ACCWGGT | 1 cut(s) | 56 |
| Csp6I | GTAC | 7 cut(s) | 215, 348, 731, 813, 1087, 1230, 1502 |
| CviAII | CATG | 7 cut(s) | 137, 365, 577, 755, 994, 1039, 1510 |
| CviQI | GTAC | 7 cut(s) | 215, 348, 731, 813, 1087, 1230, 1502 |
| DdeI | CTNAG | 3 cut(s) | 38, 106, 711 |
| DpnI | GATC | 5 cut(s) | 34, 152, 192, 1119, 1298 |
| DpnII | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| Eam1104I | CTCTTC | 2 cut(s) | 850, 1509 |
| EarI | CTCTTC | 2 cut(s) | 850, 1509 |
| Eco105I | TACGTA | 1 cut(s) | 819 |
| Eco130I | CCWWGG | 1 cut(s) | 657 |
| Eco24I | GRGCYC | 2 cut(s) | 50, 286 |
| Eco31I | GGTCTC | 2 cut(s) | 602, 756 |
| Eco32I | GATATC | 1 cut(s) | 499 |
| Eco47I | GGWCC | 1 cut(s) | 1274 |
| Eco57I | CTGAAG | 2 cut(s) | 317, 1103 |
| EcoO109I | RGGNCCY | 3 cut(s) | 46, 282, 283 |
| EcoRII | CCWGG | 1 cut(s) | 56 |
| EcoRV | GATATC | 1 cut(s) | 499 |
| EcoT14I | CCWWGG | 1 cut(s) | 657 |
| EcoT22I | ATGCAT | 1 cut(s) | 564 |
| EcoT38I | GRGCYC | 2 cut(s) | 50, 286 |
| ErhI | CCWWGG | 1 cut(s) | 657 |
| FaeI | CATG | 7 cut(s) | 140, 368, 580, 758, 997, 1042, 1513 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 435, 467 |
| FaqI | GGGAC | 2 cut(s) | 582, 894 |
| FatI | CATG | 7 cut(s) | 136, 364, 576, 754, 993, 1038, 1509 |
| FauI | CCCGC | 1 cut(s) | 490 |
| FauNDI | CATATG | 1 cut(s) | 555 |
| FbaI | TGATCA | 1 cut(s) | 190 |
| Fnu4HI | GCNGC | 7 cut(s) | 29, 439, 765, 1287, 1487, 1622, 1625 |
| FokI | GGATG | 4 cut(s) | 37, 320, 852, 1335 |
| FriOI | GRGCYC | 2 cut(s) | 50, 286 |
| Fsp4HI | GCNGC | 7 cut(s) | 29, 439, 765, 1287, 1487, 1622, 1625 |
| FspBI | CTAG | 1 cut(s) | 1371 |
| GluI | GCNGC | 7 cut(s) | 29, 439, 765, 1287, 1487, 1622, 1625 |
| HaeIII | GGCC | 2 cut(s) | 48, 284 |
| HapII | CCGG | 5 cut(s) | 305, 1168, 1233, 1616, 1628 |
| HgaI | GACGC | 1 cut(s) | 1028 |
| Hin1I | GRCGYC | 1 cut(s) | 1020 |
| Hin1II | CATG | 7 cut(s) | 140, 368, 580, 758, 997, 1042, 1513 |
| HinfI | GANTC | 3 cut(s) | 713, 1517, 1612 |
| HpaII | CCGG | 5 cut(s) | 305, 1168, 1233, 1616, 1628 |
| HphI | GGTGA | 2 cut(s) | 481, 1633 |
| Hpy166II | GTNNAC | 1 cut(s) | 1277 |
| Hpy188I | TCNGA | 7 cut(s) | 150, 262, 336, 677, 963, 1083, 1438 |
| Hpy188III | TCNNGA | 6 cut(s) | 188, 599, 637, 846, 911, 1187 |
| Hpy8I | GTNNAC | 1 cut(s) | 1277 |
| HpyAV | CCTTC | 3 cut(s) | 86, 90, 1300 |
| HpyCH4III | ACNGT | 6 cut(s) | 14, 146, 293, 735, 804, 1274 |
| HpyCH4IV | ACGT | 2 cut(s) | 506, 818 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 28, 34, 116, 568, 1034 |
| HpyF3I | CTNAG | 3 cut(s) | 38, 106, 711 |
| HpySE526I | ACGT | 2 cut(s) | 506, 818 |
| Hsp92I | GRCGYC | 1 cut(s) | 1020 |
| Hsp92II | CATG | 7 cut(s) | 140, 368, 580, 758, 997, 1042, 1513 |
| Ksp22I | TGATCA | 1 cut(s) | 190 |
| Kzo9I | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| LmnI | GCTCC | 1 cut(s) | 238 |
| Lsp1109I | GCAGC | 7 cut(s) | 15, 450, 751, 1273, 1498, 1611, 1633 |
| LweI | GCATC | 6 cut(s) | 438, 549, 961, 1141, 1171, 1313 |
| MabI | ACCWGGT | 1 cut(s) | 56 |
| MaeI | CTAG | 1 cut(s) | 1371 |
| MaeII | ACGT | 2 cut(s) | 506, 818 |
| MaeIII | GTNAC | 3 cut(s) | 207, 1265, 1669 |
| MalI | GATC | 5 cut(s) | 34, 152, 192, 1119, 1298 |
| MboI | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| MboII | GAAGA | 9 cut(s) | 323, 549, 698, 808, 867, 1009, 1214, 1526, 1621 |
| MfeI | CAATTG | 2 cut(s) | 242, 357 |
| MhlI | GDGCHC | 3 cut(s) | 50, 286, 586 |
| MlyI | GAGTC | 2 cut(s) | 722, 1526 |
| MmeI | TCCRAC | 2 cut(s) | 941, 1300 |
| Mph1103I | ATGCAT | 1 cut(s) | 564 |
| MseI | TTAA | 8 cut(s) | 222, 434, 462, 474, 1145, 1161, 1241, 1464 |
| MslI | CAYNNNNRTG | 1 cut(s) | 759 |
| MspA1I | CMGCKG | 2 cut(s) | 748, 1624 |
| MspI | CCGG | 5 cut(s) | 305, 1168, 1233, 1616, 1628 |
| MspR9I | CCNGG | 3 cut(s) | 58, 1168, 1617 |
| MunI | CAATTG | 2 cut(s) | 242, 357 |
| MvaI | CCWGG | 1 cut(s) | 58 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 28, 34, 116, 568, 1034 |
| NciI | CCSGG | 2 cut(s) | 1168, 1617 |
| NdeI | CATATG | 1 cut(s) | 555 |
| NdeII | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| NlaIII | CATG | 7 cut(s) | 140, 368, 580, 758, 997, 1042, 1513 |
| NlaIV | GGNNCC | 6 cut(s) | 47, 48, 234, 249, 284, 285 |
| NsiI | ATGCAT | 1 cut(s) | 564 |
| NspI | RCATGY | 1 cut(s) | 368 |
| PaeI | GCATGC | 1 cut(s) | 368 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 266 |
| PfeI | GAWTC | 1 cut(s) | 1612 |
| PflFI | GACNNNGTC | 1 cut(s) | 377 |
| PkrI | GCNGC | 7 cut(s) | 30, 440, 766, 1288, 1488, 1623, 1626 |
| Ple19I | CGATCG | 1 cut(s) | 35 |
| PleI | GAGTC | 2 cut(s) | 721, 1525 |
| PpsI | GAGTC | 2 cut(s) | 721, 1525 |
| Ppu21I | YACGTR | 2 cut(s) | 507, 819 |
| PshBI | ATTAAT | 1 cut(s) | 1464 |
| PsiI | TTATAA | 2 cut(s) | 1032, 1347 |
| Psp6I | CCWGG | 1 cut(s) | 56 |
| PspGI | CCWGG | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 6 cut(s) | 47, 48, 234, 249, 284, 285 |
| PspOMI | GGGCCC | 2 cut(s) | 46, 282 |
| PspPI | GGNCC | 5 cut(s) | 46, 47, 282, 283, 1274 |
| PsyI | GACNNNGTC | 1 cut(s) | 377 |
| PvuI | CGATCG | 1 cut(s) | 35 |
| PvuII | CAGCTG | 1 cut(s) | 1624 |
| RgaI | GCGATCGC | 1 cut(s) | 35 |
| RsaI | GTAC | 7 cut(s) | 216, 349, 732, 814, 1088, 1231, 1503 |
| RsaNI | GTAC | 7 cut(s) | 215, 348, 731, 813, 1087, 1230, 1502 |
| RseI | CAYNNNNRTG | 1 cut(s) | 759 |
| SaqAI | TTAA | 8 cut(s) | 222, 434, 462, 474, 1145, 1161, 1241, 1464 |
| SatI | GCNGC | 7 cut(s) | 29, 439, 765, 1287, 1487, 1622, 1625 |
| Sau3AI | GATC | 5 cut(s) | 32, 150, 190, 1117, 1296 |
| Sau96I | GGNCC | 5 cut(s) | 46, 47, 282, 283, 1274 |
| ScaI | AGTACT | 2 cut(s) | 1088, 1503 |
| SchI | GAGTC | 2 cut(s) | 722, 1526 |
| ScrFI | CCNGG | 3 cut(s) | 58, 1168, 1617 |
| SduI | GDGCHC | 3 cut(s) | 50, 286, 586 |
| SexAI | ACCWGGT | 1 cut(s) | 56 |
| SfaAI | GCGATCGC | 1 cut(s) | 35 |
| SfaNI | GCATC | 6 cut(s) | 438, 549, 961, 1141, 1171, 1313 |
| SgfI | GCGATCGC | 1 cut(s) | 35 |
| SinI | GGWCC | 1 cut(s) | 1274 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 759 |
| SnaBI | TACGTA | 1 cut(s) | 819 |
| SphI | GCATGC | 1 cut(s) | 368 |
| SsiI | CCGC | 2 cut(s) | 483, 748 |
| SspI | AATATT | 4 cut(s) | 826, 1126, 1588, 1654 |
| SspMI | CTAG | 1 cut(s) | 1371 |
| StyD4I | CCNGG | 3 cut(s) | 56, 1166, 1615 |
| StyI | CCWWGG | 1 cut(s) | 657 |
| TaaI | ACNGT | 6 cut(s) | 14, 146, 293, 735, 804, 1274 |
| TaiI | ACGT | 2 cut(s) | 509, 821 |
| TaqI | TCGA | 4 cut(s) | 387, 617, 920, 1213 |
| TatI | WGTACW | 3 cut(s) | 730, 1086, 1501 |
| TfiI | GAWTC | 1 cut(s) | 1612 |
| Tru1I | TTAA | 8 cut(s) | 222, 434, 462, 474, 1145, 1161, 1241, 1464 |
| Tru9I | TTAA | 8 cut(s) | 222, 434, 462, 474, 1145, 1161, 1241, 1464 |
| TscAI | CASTG | 1 cut(s) | 740 |
| TseI | GCWGC | 7 cut(s) | 28, 438, 764, 1286, 1486, 1621, 1624 |
| TspDTI | ATGAA | 4 cut(s) | 81, 922, 1010, 1089 |
| TspGWI | ACGGA | 3 cut(s) | 775, 1565, 1657 |
| TspRI | CASTG | 1 cut(s) | 740 |
| Tth111I | GACNNNGTC | 1 cut(s) | 377 |
| VpaK11BI | GGWCC | 1 cut(s) | 1274 |
| VspI | ATTAAT | 1 cut(s) | 1464 |
| XapI | RAATTY | 2 cut(s) | 430, 769 |
| XceI | RCATGY | 1 cut(s) | 368 |
| XspI | CTAG | 1 cut(s) | 1371 |
| ZrmI | AGTACT | 2 cut(s) | 1088, 1503 |
| Zsp2I | ATGCAT | 1 cut(s) | 564 |