Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0001315

Physical Location & Seq

Genomic Coordinates Reverse (-)

25568260 .. 25573748

Gene Structure 5489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00186190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGGCGTTTCACGGCGCTTCATGCCGTGTCTTATCATCACTGCCGTCTCTCAGCAGCAGAGCCAGGTACTACCCATTGCTTCACCTTCATTCACCAATTTCTTCGTCTCTCTTTTCAACTCTTAATGCTCAATCCCAACATGAATATGTCAAATTCAATCCCAAGCAGTCTTCTTCTCTTGACGAACCTTCTTTTCTTCACCAGCTCTCTGTTCTGTTACCAATCCCCCATCAAATTTCACCTCCAAAACAATTTGACCCCACTGATTCGAATAAGAAGGTAGAATCTGTTAGGGCTGTGGATGGGTTTTTAATGCCCGACGAGAAATTACGTGGGGTTTTTCTTCAGAAATTGAAGGGTATAGCTGTAATTGAGCATGCGCTCGACAATGTTGGTGTGGATTTGAGCGTTGATGTTGTTGCACAAGTAGTGAATAGAGGTTGTTTAGGCGGTGAAGCAATGCTTGTGTTTTTTAATTGGGCGATTAAGAAGCCAAATGTAGCTAAGCATGTTCATACATACCATATAATCCTCAAAGCATTGGGTAGAAGAAAGTTCTTTAATTATATGATGCAAGTTTTGAATGACATGAGGAGCCGAGACATACGTCTCGATTTGGAGACTGTGTCGATTGTGATGGATAGTTTTTGTCTGTGTTGGCGGTCTCATGTAGTGGCTGCAAATTCGTTTCTTAATTCAATGAAGGGGAAAGTGCGATTCAATGGCACTACGTATAACATGGTTATTGGTGGGTGGTCGAAATATGGTAGAGTTGGTGAGATGGAGAGGACTTTGGAAGCAATGGTAGCAGATGGGTTTAGTCCTGATAGTGCAACTTTCAGTTACATTCTTGAGGGTCTAGGAAGAGCTGATCGGATTGACGATGCAGTTGAGATTTTTGAGAGCATGAAGGGGAAAGGTTGCGTGCCAGACACCATTACATACAATGCAATGATCTCTAACTTTATCTCTGTTGCGAATATTGATGAATGTGTAAACTACTTCAAGAGTATGTCGAGTAATGCTTGCGATCCAAATGTTGATACTTATACCAAATTGATTGCTGGTTTCCTTAAAGCCCGGAAAGTGGCGGATGCACTGGAGATGTTTGATGAGATGTTAAGTCGAGGATTTGTTCCTACTACGGGGACTATAACCTCTTTTGTGGAACCCCTATGTAGCTATGGTCCACCATATGCTGCTATGATGATCTACCAGAAAGCAAGAAAGGTTGGATGTAGAATATCATTGACTGCTTATAAGCTATTGCTTATGCGCCTTTCTAGATTTGGTAAATGTGGAATGTTGCTAAACATTTGGGAAGAGATGCAGGAATGTGGTTATGCTTCTGATATTGAAGTTTATGAGTATGTAATCAGTGGACTTTGCAACATTGGGCAGCTTGAAAATGCTGTACTTGTCATGGAAGAGTCTCTACGAAAAGGTTTTTGCCCAAGCAGGCTTACCTATAGCAAACTAAGTAACAAACTTCTTGCTTCAAATAAGTTAGAGAGGGCTTATAAGCTATACTTGAAGATTAAAGCTGCTCATCATATAATCTTTCTTTCCTTCGTACAGCAAGTTGTTGACTTACCCGCTAGAAGAGTCGTTGTTCTAGACATTTCATCAGAGATTGGTTTGATAATAGAGTTGTCATCTTATTGGGTAAACTCCAGCATTCAGGATTGCTTACCTGTACACCATCCAGAAGTTGCCCTTTCCATTGATGTTTACCATAATGTGCAAAACTGGATCAAGACCCAAGGATTCTTGGTCGTTGGACGAAAAACCTTGACTGAGTTGAGGGATAAGATATACTGTTTAACAGATAAGGTGATGGAAAAAGATGGCCAGCATAATCATTCAGGATGTTTCCTCATAGAAGATAGATTCTACAAAGATCTGAGGGTTCCTTCTGCATTATATTATAGTCGATCTGTATATGATTGGCTTAGAAATTTAAGAGATGATGCTCTAAAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

661

Amino Acids

74.7

Weight (kDa)

8.59

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	244 - 288	1.6e-07	PPR repeat family
PPR_3	PF13812	265 - 321	8.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	271 - 304	3.8e-06	PPR repeat
PPR_2	PF13041	283 - 322	2.7e-09	PPR repeat family
PPR_long	PF17177	291 - 387	1.7e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	310 - 359	8.9e-11	PPR repeat family
PPR_1	PF12854	343 - 373	1.5e-06	PPR repeat
PPR_2	PF13041	345 - 393	3.6e-10	PPR repeat family
PPR	PF01535	349 - 378	9.6e-06	PPR repeat
SNAPC3	PF12251	589 - 654	9.3e-15	snRNA-activating protein complex (SNAPc), subunit 3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001315)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43820
fragaria_vesca	FvH4_5g24880 FvH4_5g25350 FvH4_5g25520
malus_domestica	MD16G1284000.v1.1
prunus_persica	Prupe.5G009500_v2.0.a1
pyrus_communis	pycom16g26010
rosa_chinensis	RchiOBHm_Chr6g0271861 RchiOBHm_Chr6g0271871 RchiOBHm_Chr6g0271981 RchiOBHm_Chr7g0215761 RchiOBHm_Chr7g0215771 RchiOBHm_Chr7g0215901 RchiOBHm_Chr7g0217231 RchiOBHm_Chr7g0219831
rosa_laevigata	RLG00000002611 RLG00000002625 RLG00000013566
rosa_multiflora	Rmu_sc0000055.1_g000008 Rmu_sc0000055.1_g000009 Rmu_sc0000516.1_g000005 Rmu_sc0000516.1_g000006 Rmu_sc0004379.1_g000016 Rmu_sc0006240.1_g000009 Rmu_sc0007857.1_g000006 Rmu_sc0016364.1_g000002 Rmu_sc0016407.1_g000001 Rmu_sc0023052.1_g000001
rosa_roxburghii	Rroxscaffold_2G00114980 Rroxscaffold_3G00243850 Rroxscaffold_5G00342010 Rroxscaffold_7G00186190
rosa_rugosa	Rorug06G0064100 Rorug07G0156600 Rorug07G0157900 Rorug07G0158000
rosa_samantha	Rh1BG116200 Rh6AG181800 Rh6BG185400 Rh6CG182900 Rh6CG183200 Rh6DG174300 Rh6DG174600 Rh7AG294600 Rh7AG306400 Rh7AG306500 Rh7BG286400 Rh7CG314600 Rh7CG325500 Rh7DG296900 Rh7DG299400 Rh7DG306200
rosa_wichuraiana	Rw6G015640 Rw7G026030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1260, 1521
AciI	CCGC	4 cut(s)	450, 661, 1091, 1596
AclWI	GGATC	2 cut(s)	1025, 1760
AcoI	YGGCCR	1 cut(s)	1849
AcsI	RAATTY	4 cut(s)	152, 234, 682, 1957
AcuI	CTGAAG	1 cut(s)	329
AfaI	GTAC	4 cut(s)	68, 1416, 1575, 1698
AfiI	CCNNNNNNNGG	2 cut(s)	1087, 1145
AjnI	CCWGG	1 cut(s)	62
AluBI	AGCT	9 cut(s)	205, 365, 503, 869, 1182, 1264, 1402, 1525, 1544
AluI	AGCT	9 cut(s)	205, 365, 503, 869, 1182, 1264, 1402, 1525, 1544
Alw26I	GTCTC	7 cut(s)	51, 111, 594, 614, 614, 669, 1437
AlwI	GGATC	2 cut(s)	1025, 1760
AoxI	GGCC	1 cut(s)	1849
ApeKI	GCWGC	5 cut(s)	54, 677, 1199, 1399, 1544
ApoI	RAATTY	4 cut(s)	152, 234, 682, 1957
AspLEI	GCGC	3 cut(s)	17, 382, 1278
AspS9I	GGNCC	1 cut(s)	1187
AsuC2I	CCSGG	1 cut(s)	1081
AsuHPI	GGTGA	7 cut(s)	74, 84, 191, 231, 464, 788, 1846
AsuII	TTCGAA	1 cut(s)	269
AvaII	GGWCC	1 cut(s)	1187
BalI	TGGCCA	1 cut(s)	1851
BarI	GAAGNNNNNNTAC	2 cut(s)	1419, 1451
BbsI	GAAGAC	1 cut(s)	162
BbvI	GCAGC	5 cut(s)	66, 664, 1186, 1411, 1531
BccI	CCATC	8 cut(s)	237, 296, 631, 775, 806, 1710, 1831, 1841
BceAI	ACGGC	3 cut(s)	9, 28, 28
BciT130I	CCWGG	1 cut(s)	64
BcnI	CCSGG	1 cut(s)	1081
BcoDI	GTCTC	7 cut(s)	51, 111, 594, 614, 614, 669, 1437
BfaI	CTAG	4 cut(s)	860, 1284, 1599, 1616
BfmI	CTRYAG	1 cut(s)	1468
BfoI	RGCGCY	1 cut(s)	18
BglII	AGATCT	1 cut(s)	1900
BisI	GCNGC	5 cut(s)	55, 678, 1200, 1400, 1545
BlpI	GCTNAGC	1 cut(s)	504
BlsI	GCNGC	5 cut(s)	56, 679, 1201, 1401, 1546
Bme1390I	CCNGG	2 cut(s)	64, 1081
Bme18I	GGWCC	1 cut(s)	1187
BmgT120I	GGNCC	1 cut(s)	1187
BmiI	GGNNCC	3 cut(s)	596, 1170, 1911
BmrFI	CCNGG	2 cut(s)	64, 1081
BmsI	GCATC	5 cut(s)	561, 874, 1084, 1317, 1960
BoxI	GACNNNNGTC	1 cut(s)	606
BpiI	GAAGAC	1 cut(s)	162
BpmI	CTGGAG	2 cut(s)	1121, 1657
Bpu1102I	GCTNAGC	1 cut(s)	504
Bpu14I	TTCGAA	1 cut(s)	269
BpuEI	CTTGAG	1 cut(s)	872
BpuMI	CCSGG	1 cut(s)	1081
BsaAI	YACGTR	2 cut(s)	332, 732
BsaI	GGTCTC	1 cut(s)	669
BsaJI	CCNNGG	1 cut(s)	1762
BsaXI	ACNNNNNCTCC	2 cut(s)	611, 641
Bsc4I	CCNNNNNNNGG	2 cut(s)	1087, 1145
Bse1I	ACTGG	2 cut(s)	1104, 1754
Bse3DI	GCAATG	4 cut(s)	74, 465, 807, 957
BseBI	CCWGG	1 cut(s)	64
BseDI	CCNNGG	1 cut(s)	1762
BseGI	GGATG	5 cut(s)	307, 1099, 1241, 1702, 1874
BseLI	CCNNNNNNNGG	2 cut(s)	1087, 1145
BseMI	GCAATG	4 cut(s)	74, 465, 807, 957
BseMII	CTCAG	3 cut(s)	64, 1788, 1895
BseNI	ACTGG	2 cut(s)	1104, 1754
BseRI	GAGGAG	1 cut(s)	607
BseXI	GCAGC	5 cut(s)	66, 664, 1186, 1411, 1531
BshFI	GGCC	1 cut(s)	1851
BsiSI	CCGG	1 cut(s)	1081
BslFI	GGGAC	1 cut(s)	1162
BslI	CCNNNNNNNGG	2 cut(s)	1087, 1145
BsmAI	GTCTC	7 cut(s)	51, 111, 594, 614, 614, 669, 1437
BsmBI	CGTCTC	3 cut(s)	51, 111, 614
BsmFI	GGGAC	1 cut(s)	1162
BsmI	GAATGC	1 cut(s)	1677
BsnI	GGCC	1 cut(s)	1851
Bso31I	GGTCTC	1 cut(s)	669
Bsp119I	TTCGAA	1 cut(s)	269
Bsp1407I	TGTACA	1 cut(s)	1696
Bsp143I	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
Bsp1720I	GCTNAGC	1 cut(s)	504
BspACI	CCGC	4 cut(s)	450, 661, 1091, 1596
BspANI	GGCC	1 cut(s)	1851
BspCNI	CTCAG	3 cut(s)	63, 1789, 1896
BspLI	GGNNCC	3 cut(s)	596, 1170, 1911
BspPI	GGATC	2 cut(s)	1025, 1760
BspQI	GCTCTTC	1 cut(s)	859
BspT104I	TTCGAA	1 cut(s)	269
BspTNI	GGTCTC	1 cut(s)	669
BsrDI	GCAATG	4 cut(s)	74, 465, 807, 957
BsrGI	TGTACA	1 cut(s)	1696
BsrI	ACTGG	2 cut(s)	1104, 1754
BssECI	CCNNGG	1 cut(s)	1762
BssMI	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
BssT1I	CCWWGG	1 cut(s)	1762
Bst2UI	CCWGG	1 cut(s)	64
Bst4CI	ACNGT	2 cut(s)	625, 1820
Bst6I	CTCTTC	4 cut(s)	859, 1317, 1422, 1597
BstAUI	TGTACA	1 cut(s)	1696
BstBAI	YACGTR	2 cut(s)	332, 732
BstBI	TTCGAA	1 cut(s)	269
BstC8I	GCNNGC	5 cut(s)	378, 926, 1027, 1460, 1853
BstDEI	CTNAG	6 cut(s)	50, 504, 1478, 1797, 1904, 1952
BstF5I	GGATG	5 cut(s)	307, 1099, 1241, 1702, 1874
BstH2I	RGCGCY	1 cut(s)	18
BstHHI	GCGC	3 cut(s)	17, 382, 1278
BstKTI	GATC	7 cut(s)	874, 957, 1033, 1212, 1755, 1903, 1937
BstMAI	GTCTC	7 cut(s)	51, 111, 594, 614, 614, 669, 1437
BstMBI	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
BstMWI	GCNNNNNNNGC	2 cut(s)	21, 806
BstNI	CCWGG	1 cut(s)	64
BstNSI	RCATGY	2 cut(s)	380, 512
BstPAI	GACNNNNGTC	1 cut(s)	606
BstSCI	CCNGG	2 cut(s)	62, 1079
BstSFI	CTRYAG	1 cut(s)	1468
BstSNI	TACGTA	1 cut(s)	732
BstV1I	GCAGC	5 cut(s)	66, 664, 1186, 1411, 1531
BstV2I	GAAGAC	1 cut(s)	162
BstX2I	RGATCY	1 cut(s)	1900
BstYI	RGATCY	1 cut(s)	1900
BsuRI	GGCC	1 cut(s)	1851
BtsCI	GGATG	5 cut(s)	307, 1099, 1241, 1702, 1874
BtsI	GCAGTG	1 cut(s)	38
BtsIMutI	CAGTG	4 cut(s)	38, 261, 1097, 1384
Cac8I	GCNNGC	5 cut(s)	378, 926, 1027, 1460, 1853
CfoI	GCGC	3 cut(s)	17, 382, 1278
Cfr13I	GGNCC	1 cut(s)	1187
Csp6I	GTAC	4 cut(s)	67, 1415, 1574, 1697
CviAII	CATG	9 cut(s)	21, 140, 377, 509, 589, 668, 739, 907, 1423
CviQI	GTAC	4 cut(s)	67, 1415, 1574, 1697
DdeI	CTNAG	6 cut(s)	50, 504, 1478, 1797, 1904, 1952
DpnI	GATC	7 cut(s)	873, 956, 1032, 1211, 1754, 1902, 1936
DpnII	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
EaeI	YGGCCR	1 cut(s)	1849
Eam1104I	CTCTTC	4 cut(s)	859, 1317, 1422, 1597
EarI	CTCTTC	4 cut(s)	859, 1317, 1422, 1597
EciI	GGCGGA	1 cut(s)	1106
Eco105I	TACGTA	1 cut(s)	732
Eco130I	CCWWGG	1 cut(s)	1762
Eco31I	GGTCTC	1 cut(s)	669
Eco47I	GGWCC	1 cut(s)	1187
Eco57I	CTGAAG	1 cut(s)	329
EcoRII	CCWGG	1 cut(s)	62
EcoT14I	CCWWGG	1 cut(s)	1762
ErhI	CCWWGG	1 cut(s)	1762
Esp3I	CGTCTC	3 cut(s)	51, 111, 614
FaeI	CATG	9 cut(s)	24, 143, 380, 512, 592, 671, 742, 910, 1426
FalI	AAGNNNNNCTT	6 cut(s)	447, 479, 1514, 1546, 1701, 1733
FaqI	GGGAC	1 cut(s)	1162
FatI	CATG	9 cut(s)	20, 139, 376, 508, 588, 667, 738, 906, 1422
FauI	CCCGC	1 cut(s)	1603
FauNDI	CATATG	1 cut(s)	1195
Fnu4HI	GCNGC	5 cut(s)	55, 678, 1200, 1400, 1545
FokI	GGATG	5 cut(s)	314, 1106, 1248, 1689, 1881
Fsp4HI	GCNGC	5 cut(s)	55, 678, 1200, 1400, 1545
FspBI	CTAG	4 cut(s)	860, 1284, 1599, 1616
GlaI	GCGC	3 cut(s)	16, 381, 1277
GluI	GCNGC	5 cut(s)	55, 678, 1200, 1400, 1545
GsuI	CTGGAG	2 cut(s)	1121, 1657
HaeII	RGCGCY	1 cut(s)	18
HaeIII	GGCC	1 cut(s)	1851
HapII	CCGG	1 cut(s)	1081
HhaI	GCGC	3 cut(s)	17, 382, 1278
Hin1II	CATG	9 cut(s)	24, 143, 380, 512, 592, 671, 742, 910, 1426
Hin6I	GCGC	3 cut(s)	15, 380, 1276
HinP1I	GCGC	3 cut(s)	15, 380, 1276
HincII	GTYRAC	1 cut(s)	1588
HindII	GTYRAC	1 cut(s)	1588
HinfI	GANTC	7 cut(s)	266, 284, 717, 1430, 1605, 1767, 1890
HpaII	CCGG	1 cut(s)	1081
HphI	GGTGA	7 cut(s)	74, 84, 191, 231, 464, 788, 1846
Hpy166II	GTNNAC	7 cut(s)	997, 1190, 1382, 1588, 1669, 1699, 1732
Hpy188I	TCNGA	5 cut(s)	348, 876, 1351, 1630, 1905
Hpy8I	GTNNAC	7 cut(s)	997, 1190, 1382, 1588, 1669, 1699, 1732
Hpy99I	CGWCG	1 cut(s)	323
HpyAV	CCTTC	8 cut(s)	95, 198, 271, 349, 697, 904, 1579, 1923
HpyCH4III	ACNGT	2 cut(s)	625, 1820
HpyCH4IV	ACGT	3 cut(s)	331, 607, 731
HpyF10VI	GCNNNNNNNGC	2 cut(s)	21, 806
HpyF3I	CTNAG	6 cut(s)	50, 504, 1478, 1797, 1904, 1952
HpySE526I	ACGT	3 cut(s)	331, 607, 731
Hsp92II	CATG	9 cut(s)	24, 143, 380, 512, 592, 671, 742, 910, 1426
HspAI	GCGC	3 cut(s)	15, 380, 1276
Kzo9I	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
LguI	GCTCTTC	1 cut(s)	859
LmnI	GCTCC	1 cut(s)	594
Lsp1109I	GCAGC	5 cut(s)	66, 664, 1186, 1411, 1531
LweI	GCATC	5 cut(s)	561, 874, 1084, 1317, 1960
MaeI	CTAG	4 cut(s)	860, 1284, 1599, 1616
MaeII	ACGT	3 cut(s)	331, 607, 731
MaeIII	GTNAC	3 cut(s)	216, 842, 1481
MalI	GATC	7 cut(s)	873, 956, 1032, 1211, 1754, 1902, 1936
MboI	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
MflI	RGATCY	1 cut(s)	1900
MlsI	TGGCCA	1 cut(s)	1851
MluNI	TGGCCA	1 cut(s)	1851
MlyI	GAGTC	2 cut(s)	1439, 1614
MmeI	TCCRAC	2 cut(s)	1213, 1759
Mox20I	TGGCCA	1 cut(s)	1851
MscI	TGGCCA	1 cut(s)	1851
MslI	CAYNNNNRTG	1 cut(s)	144
Msp20I	TGGCCA	1 cut(s)	1851
MspI	CCGG	1 cut(s)	1081
MspR9I	CCNGG	2 cut(s)	64, 1081
Mva1269I	GAATGC	1 cut(s)	1677
MvaI	CCWGG	1 cut(s)	64
MwoI	GCNNNNNNNGC	2 cut(s)	21, 806
NciI	CCSGG	1 cut(s)	1081
NdeI	CATATG	1 cut(s)	1195
NdeII	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
NlaIII	CATG	9 cut(s)	24, 143, 380, 512, 592, 671, 742, 910, 1426
NlaIV	GGNNCC	3 cut(s)	596, 1170, 1911
NmeAIII	GCCGAG	1 cut(s)	623
NspI	RCATGY	2 cut(s)	380, 512
NspV	TTCGAA	1 cut(s)	269
PaeI	GCATGC	1 cut(s)	380
PciSI	GCTCTTC	1 cut(s)	859
PctI	GAATGC	1 cut(s)	1677
PfeI	GAWTC	5 cut(s)	266, 284, 717, 1767, 1890
PflFI	GACNNNGTC	1 cut(s)	625
PkrI	GCNGC	5 cut(s)	56, 679, 1201, 1401, 1546
PleI	GAGTC	2 cut(s)	1438, 1613
PpsI	GAGTC	2 cut(s)	1438, 1613
Ppu21I	YACGTR	2 cut(s)	332, 732
PshAI	GACNNNNGTC	1 cut(s)	606
PsiI	TTATAA	2 cut(s)	1260, 1521
Psp6I	CCWGG	1 cut(s)	62
PspGI	CCWGG	1 cut(s)	62
PspN4I	GGNNCC	3 cut(s)	596, 1170, 1911
PspPI	GGNCC	1 cut(s)	1187
PsuI	RGATCY	1 cut(s)	1900
PsyI	GACNNNGTC	1 cut(s)	625
RsaI	GTAC	4 cut(s)	68, 1416, 1575, 1698
RsaNI	GTAC	4 cut(s)	67, 1415, 1574, 1697
RseI	CAYNNNNRTG	1 cut(s)	144
SapI	GCTCTTC	1 cut(s)	859
SatI	GCNGC	5 cut(s)	55, 678, 1200, 1400, 1545
Sau3AI	GATC	7 cut(s)	871, 954, 1030, 1209, 1752, 1900, 1934
Sau96I	GGNCC	1 cut(s)	1187
SchI	GAGTC	2 cut(s)	1439, 1614
ScrFI	CCNGG	2 cut(s)	64, 1081
SfaNI	GCATC	5 cut(s)	561, 874, 1084, 1317, 1960
SfcI	CTRYAG	1 cut(s)	1468
SfuI	TTCGAA	1 cut(s)	269
SinI	GGWCC	1 cut(s)	1187
SmiMI	CAYNNNNRTG	1 cut(s)	144
SmlI	CTYRAG	1 cut(s)	851
SmoI	CTYRAG	1 cut(s)	851
SnaBI	TACGTA	1 cut(s)	732
SphI	GCATGC	1 cut(s)	380
SsiI	CCGC	4 cut(s)	450, 661, 1091, 1596
SspI	AATATT	1 cut(s)	982
SspMI	CTAG	4 cut(s)	860, 1284, 1599, 1616
StyD4I	CCNGG	2 cut(s)	62, 1079
StyI	CCWWGG	1 cut(s)	1762
TaaI	ACNGT	2 cut(s)	625, 1820
TaiI	ACGT	3 cut(s)	334, 610, 734
TaqI	TCGA	8 cut(s)	269, 384, 612, 629, 758, 1016, 1126, 1933
TatI	WGTACW	2 cut(s)	1414, 1696
TfiI	GAWTC	5 cut(s)	266, 284, 717, 1767, 1890
TscAI	CASTG	4 cut(s)	45, 268, 1104, 1384
TseI	GCWGC	5 cut(s)	54, 677, 1199, 1399, 1544
TspDTI	ATGAA	8 cut(s)	9, 77, 156, 503, 716, 923, 1002, 1614
TspRI	CASTG	4 cut(s)	45, 268, 1104, 1384
Tth111I	GACNNNGTC	1 cut(s)	625
VpaK11BI	GGWCC	1 cut(s)	1187
XapI	RAATTY	4 cut(s)	152, 234, 682, 1957
XbaI	TCTAGA	2 cut(s)	1283, 1615
XceI	RCATGY	2 cut(s)	380, 512
XspI	CTAG	4 cut(s)	860, 1284, 1599, 1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.