RchiOBHm_Chr1g0359081

Anthocyanidin reductase-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
51082561 .. 51083229
669 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 264 bp
ATGGACGAGTCTTGTTGGACTCCCTTCAATCTTTCATTTCCTCATGCCAATGAGGGATTGATGGCATATACACACACAAAGACCTTTTCGGAGAAAGAATTGTTGGAGCATAATGAGAATAGTGTTCTTGAGCTTGATGTAGTCAGCATTGCTTGTGGTCTTCTGGGAGGGGACACCCTTCTCCCTAGTATGCCTGAGAGCATGGGAGTGCTCATCTCACACTCTCACAGGTCACAAACAATAAGGGGACGTATCATGTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

9.71

Weight (kDa)

5.13

Isoelectric Point (pI)

51.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 28
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
AluBI AGCT 1 cut(s) 133
AluI AGCT 1 cut(s) 133
Alw21I GWGCWC 1 cut(s) 213
BbsI GAAGAC 1 cut(s) 152
Bbv12I GWGCWC 1 cut(s) 213
BccI CCATC 1 cut(s) 55
BfaI CTAG 1 cut(s) 186
BpiI GAAGAC 1 cut(s) 152
BpuEI CTTGAG 1 cut(s) 149
Bse3DI GCAATG 1 cut(s) 147
BseMI GCAATG 1 cut(s) 147
BseMII CTCAG 1 cut(s) 186
BsiHKAI GWGCWC 1 cut(s) 213
BslFI GGGAC 1 cut(s) 185
BsmFI GGGAC 1 cut(s) 185
Bsp1286I GDGCHC 1 cut(s) 213
BspCNI CTCAG 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 147
BstDEI CTNAG 1 cut(s) 195
BstV2I GAAGAC 1 cut(s) 152
CviAII CATG 3 cut(s) 44, 202, 256
CviJI RGCY 1 cut(s) 133
CviKI_1 RGCY 1 cut(s) 133
DdeI CTNAG 1 cut(s) 195
FaeI CATG 3 cut(s) 47, 205, 259
FaiI YATR 7 cut(s) 45, 67, 69, 111, 191, 203, 257
FaqI GGGAC 1 cut(s) 185
FatI CATG 3 cut(s) 43, 201, 255
FspBI CTAG 1 cut(s) 186
Hin1II CATG 3 cut(s) 47, 205, 259
HinfI GANTC 2 cut(s) 8, 19
Hpy188I TCNGA 2 cut(s) 91, 263
Hpy188III TCNNGA 1 cut(s) 128
HpyAV CCTTC 2 cut(s) 34, 188
HpyCH4IV ACGT 1 cut(s) 250
HpyF3I CTNAG 1 cut(s) 195
HpySE526I ACGT 1 cut(s) 250
Hsp92II CATG 3 cut(s) 47, 205, 259
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 3 cut(s) 149, 207, 214
MaeI CTAG 1 cut(s) 186
MaeII ACGT 1 cut(s) 250
MaeIII GTNAC 1 cut(s) 231
MboII GAAGA 1 cut(s) 152
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 1 cut(s) 98
MlyI GAGTC 2 cut(s) 13, 17
MmeI TCCRAC 1 cut(s) 84
MnlI CCTC 3 cut(s) 46, 51, 161
MslI CAYNNNNRTG 2 cut(s) 48, 206
NlaIII CATG 3 cut(s) 47, 205, 259
NmuCI GTSAC 1 cut(s) 231
PleI GAGTC 2 cut(s) 13, 16
PpsI GAGTC 2 cut(s) 13, 16
RseI CAYNNNNRTG 2 cut(s) 48, 206
SchI GAGTC 2 cut(s) 13, 17
SduI GDGCHC 1 cut(s) 213
SetI ASST 4 cut(s) 86, 135, 233, 253
SmiMI CAYNNNNRTG 2 cut(s) 48, 206
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 1 cut(s) 98
SspMI CTAG 1 cut(s) 186
TaiI ACGT 1 cut(s) 253
TasI AATT 1 cut(s) 98
TseFI GTSAC 1 cut(s) 231
Tsp45I GTSAC 1 cut(s) 231
TspDTI ATGAA 1 cut(s) 24
XspI CTAG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.