Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001188

Physical Location & Seq

Genomic Coordinates Reverse (-)

2524001 .. 2529479

Gene Structure 5479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005881

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGCTAACCACCACTGCCACTCTCAGCTCCTCCTCTGCTTCCCAACTCGCACCACTCTTCCACTCTCTATCCCCAAACCCAATCTCCCTCAGATTCTCCTCCACGTTACAAGTAACCAACAACAGGGCCAGACGAACTCTCACAAGCTTCACTCGCCAAAAATGCCAGCTCCCTGCTCTGAGAGTGTATGCTAGTTACGAAGCTGCCCCTGCTATGGCTGAGGCCACCACGGTGCCGTCGGAAATGAAGGCGTGGGTGTATGACAAATATGGGGGTGTTGATGTCTTGAAGTTTGATACCAAAGTTGCAGTGCCTAAATTGCTGGACGATCAAGTCTTGATTAAGGTTATGGCTGCCGCGCTTAACCCGGTTGACTTCAAGAGGAGGCAGGGGAAGTTCCAGAACACTGACTCTCCGCTTCCGACTGTTCCGGGATATGATGTTGCAGGTGTGGTGGTGAAGGTTGGGAGTCAAGTAAAGGACTTTAAAGTGGGGGATGAAGTGTATGGGGACATCCATGAGAAAGCTTTGGATGGGCCTAAACAATCTGGCTCGCTTGCTGAGTACACTGCTGTTGAAGAGAGGTTGATTGCACTAAAGCCTAAGAATCTAGACTTTACTCAGGCTGCTTCTCTGCCTCTTGCAATCGAGACTGCTTATGAGGGTCTCGAAAGGACAGGGTTCTCTGCTGGTAAATCATTGCTTGTTTTGAATGGTGCTGGTGGAGTCGGAAGCCTGGTGATTCAGCTAGCAAAACATGTATTTGGAGCTTCAAGAGTCGCGGCCACTTCAAGCACTGGAAAACTGGAGTTGTTGAAGAGCTTGGGGGCAGATTTGGCAATTGACTACACCAAGGAGAACATTGAAGAATTAACAGAAAAGTTTGATGTTGTCTATGATGCTATTGGTCAATGCGATAAAGCAGTGAAGGTGGTGAAAGAAGGCGGCAGTGTGGTGGCTCTAACAGGTGCAGTAACACCTCCAGGCTTCAGATTCGTAGTGACATCCAATGGAGCTGTCCTGAAGAAACTAAACCCATATTTAGAAAGTGGGAAGGTGAAGCCAGTGTTAGACCCCAAAGGGCCCTTCCCTTTCTCCAAGCTCGTCGAGGCTTTCACTTACCTCGAAACAAATCGAGCCACTGGAAAGCGACTATGGTTCGACGGCGCAGTCGATAGTGGTGCAGTCGATAATGGTGCAGTCGACGCCACTGGTTATGGTGGCGATGTGGATCTTGGGTCCTTGGGTTTTCATCTGTTTGGACCAGAAATCAATATGAAGGATGGAGGCGCGCCACTACGTGCTGGCAGGGTGGAGCTGCTCATATCGGCAAAGCGGGCTGCTGGATGGCTGGTTGAACAGCAATCGGCGACTCCGATGGCAAGGCTGCGGCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010319 GO:0016491 GO:0016627 GO:0016628 GO:0031967 GO:0031975 GO:0035671 GO:0035798 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0050896 GO:0055114

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ADH_N ADH_zinc_N_2

Protein Analysis

466

Amino Acids

49.57

Weight (kDa)

8.72

Isoelectric Point (pI)

30.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADH_N	PF08240	109 - 201	5.3e-18	Alcohol dehydrogenase GroES-like domain
Glu_dehyd_C	PF16912	215 - 331	3.8e-06	Glucose dehydrogenase C-terminus
ADH_zinc_N	PF00107	242 - 321	1.5e-15	Zinc-binding dehydrogenase
ADH_zinc_N_2	PF13602	275 - 383	1.9e-15	Zinc-binding dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001188)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23740
fragaria_vesca	FvH4_4g34500 FvH4_6g50700
malus_domestica	MD09G1033200.v1.1 MD09G1033600.v1.1 MD09G1033700.v1.1 MD09G1034000.v1.1 MD13G1092200.v1.1 MD16G1092800.v1.1
prunus_persica	Prupe.1G253500_v2.0.a1 Prupe.3G284300_v2.0.a1 Prupe.3G284400_v2.0.a1 Prupe.3G284700_v2.0.a1 Prupe.3G284800_v2.0.a1 Prupe.3G284900_v2.0.a1
pyrus_communis	pycom111g02680 pycom111g02700 pycom13g08010 pycom16g07920
rosa_chinensis	RchiOBHm_Chr2g0171461 RchiOBHm_Chr2g0171481 RchiOBHm_Chr2g0171491 RchiOBHm_Chr2g0172531 RchiOBHm_Chr4g0443881
rosa_laevigata	RLG00000005881 RLG00000022016 RLG00000022019 RLG00000022020 RLG00000022113 RLG00000023107
rosa_multiflora	Rmu_sc0000912.1_g000009 Rmu_sc0006783.1_g000002 Rmu_sc0006783.1_g000005 Rmu_sc0010179.1_g000003 Rmu_sc0019062.1_g000006
rosa_roxburghii	Rroxscaffold_2G00080590 Rroxscaffold_2G00080610 Rroxscaffold_2G00080630 Rroxscaffold_5G00384440
rosa_rugosa	Rorug02G0554600 Rorug02G0554700 Rorug02G0554800 Rorug04G0348000
rosa_samantha	Rh2AG628800 Rh2AG629000 Rh2BG639300 Rh2BG639500 Rh2BG639600 Rh2CG607900 Rh2CG608100 Rh2CG608200 Rh2CG615900 Rh4DG414600
rosa_wichuraiana	Rw2G052090 Rw2G052100 Rw2G052590 Rw4G035080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	437
AasI	GACNNNNNNGTC	2 cut(s)	332, 1169
Acc36I	ACCTGC	1 cut(s)	437
AccB1I	GGYRCC	1 cut(s)	232
AccI	GTMKAC	1 cut(s)	1203
AccII	CGCG	3 cut(s)	359, 782, 1292
AciI	CCGC	6 cut(s)	357, 416, 782, 945, 1336, 1390
AclWI	GGATC	1 cut(s)	1239
AcoI	YGGCCR	1 cut(s)	783
AcuI	CTGAAG	2 cut(s)	973, 1043
AcyI	GRCGYC	1 cut(s)	1206
AdeI	CACNNNGTG	1 cut(s)	1301
AfaI	GTAC	1 cut(s)	566
AfiI	CCNNNNNNNGG	2 cut(s)	123, 214
AflIII	ACRYGT	1 cut(s)	757
AgsI	TTSAA	9 cut(s)	289, 379, 578, 712, 774, 792, 817, 866, 1358
AjnI	CCWGG	2 cut(s)	735, 982
AjuI	GAANNNNNNNTTGG	2 cut(s)	1070, 1102
AleI	CACNNNNGTG	1 cut(s)	230
Alw26I	GTCTC	2 cut(s)	644, 671
AlwI	GGATC	1 cut(s)	1239
AoxI	GGCC	5 cut(s)	126, 222, 536, 783, 1082
ApaI	GGGCCC	1 cut(s)	1086
ApeKI	GCWGC	6 cut(s)	203, 353, 626, 1318, 1340, 1387
AscI	GGCGCGCC	1 cut(s)	1290
AspLEI	GCGC	4 cut(s)	361, 1169, 1292, 1294
AspS9I	GGNCC	6 cut(s)	126, 536, 1082, 1083, 1239, 1262
AsuC2I	CCSGG	2 cut(s)	368, 432
AsuHPI	GGTGA	4 cut(s)	469, 751, 946, 1069
AsuNHI	GCTAGC	1 cut(s)	748
AvaII	GGWCC	2 cut(s)	1239, 1262
BaeGI	GKGCMC	1 cut(s)	1086
BaeI	ACNNNNGTAYC	2 cut(s)	288, 321
BanI	GGYRCC	1 cut(s)	232
BanII	GRGCYC	1 cut(s)	1086
BbvCI	CCTCAGC	1 cut(s)	219
BbvI	GCAGC	6 cut(s)	190, 340, 613, 1305, 1327, 1374
BccI	CCATC	4 cut(s)	527, 1277, 1341, 1372
BceAI	ACGGC	2 cut(s)	220, 1180
BcgI	CGANNNNNNTGC	4 cut(s)	1163, 1178, 1197, 1212
BciT130I	CCWGG	2 cut(s)	737, 984
BcnI	CCSGG	2 cut(s)	368, 432
BcoDI	GTCTC	2 cut(s)	644, 671
BfaI	CTAG	3 cut(s)	192, 611, 749
BfuAI	ACCTGC	1 cut(s)	437
Bme1390I	CCNGG	4 cut(s)	368, 432, 737, 984
Bme18I	GGWCC	2 cut(s)	1239, 1262
BmgT120I	GGNCC	6 cut(s)	126, 536, 1082, 1083, 1239, 1262
BmiI	GGNNCC	3 cut(s)	234, 1084, 1240
BmrFI	CCNGG	4 cut(s)	368, 432, 737, 984
BmsI	GCATC	1 cut(s)	889
BmtI	GCTAGC	1 cut(s)	752
BpmI	CTGGAG	2 cut(s)	827, 966
Bpu10I	CCTNAGC	1 cut(s)	219
BpuMI	CCSGG	2 cut(s)	368, 432
BsaAI	YACGTR	1 cut(s)	1301
BsaBI	GATNNNNATC	1 cut(s)	1230
BsaHI	GRCGYC	1 cut(s)	1206
BsaI	GGTCTC	1 cut(s)	671
BsaJI	CCNNGG	3 cut(s)	228, 852, 1242
BsaXI	ACNNNNNCTCC	4 cut(s)	68, 98, 397, 427
Bsc4I	CCNNNNNNNGG	2 cut(s)	123, 214
Bse1I	ACTGG	5 cut(s)	802, 810, 1064, 1147, 1216
Bse3DI	GCAATG	1 cut(s)	698
Bse8I	GATNNNNATC	1 cut(s)	1230
BseBI	CCWGG	2 cut(s)	737, 984
BseDI	CCNNGG	3 cut(s)	228, 852, 1242
BseGI	GGATG	6 cut(s)	502, 513, 538, 1004, 1288, 1352
BseJI	GATNNNNATC	1 cut(s)	1230
BseLI	CCNNNNNNNGG	2 cut(s)	123, 214
BseMI	GCAATG	1 cut(s)	698
BseMII	CTCAG	6 cut(s)	37, 103, 170, 210, 552, 635
BseNI	ACTGG	5 cut(s)	802, 810, 1064, 1147, 1216
BsePI	GCGCGC	1 cut(s)	1290
BseRI	GAGGAG	4 cut(s)	19, 22, 88, 397
BseSI	GKGCMC	1 cut(s)	1086
BseXI	GCAGC	6 cut(s)	190, 340, 613, 1305, 1327, 1374
BsgI	GTGCAG	3 cut(s)	990, 1203, 1218
Bsh1236I	CGCG	3 cut(s)	359, 782, 1292
BshFI	GGCC	5 cut(s)	128, 224, 538, 785, 1084
BshNI	GGYRCC	1 cut(s)	232
BsiSI	CCGG	2 cut(s)	368, 431
BslFI	GGGAC	1 cut(s)	524
BslI	CCNNNNNNNGG	2 cut(s)	123, 214
BsmAI	GTCTC	2 cut(s)	644, 671
BsmFI	GGGAC	1 cut(s)	524
BsnI	GGCC	5 cut(s)	128, 224, 538, 785, 1084
Bso31I	GGTCTC	1 cut(s)	671
Bsp120I	GGGCCC	1 cut(s)	1082
Bsp1286I	GDGCHC	1 cut(s)	1086
Bsp143I	GATC	2 cut(s)	328, 1231
BspACI	CCGC	6 cut(s)	357, 416, 782, 945, 1336, 1390
BspANI	GGCC	5 cut(s)	128, 224, 538, 785, 1084
BspCNI	CTCAG	6 cut(s)	36, 102, 171, 211, 553, 634
BspFNI	CGCG	3 cut(s)	359, 782, 1292
BspLI	GGNNCC	3 cut(s)	234, 1084, 1240
BspMI	ACCTGC	1 cut(s)	437
BspOI	GCTAGC	1 cut(s)	752
BspPI	GGATC	1 cut(s)	1239
BspQI	GCTCTTC	1 cut(s)	812
BspT107I	GGYRCC	1 cut(s)	232
BspTNI	GGTCTC	1 cut(s)	671
BsrDI	GCAATG	1 cut(s)	698
BsrI	ACTGG	5 cut(s)	802, 810, 1064, 1147, 1216
BssECI	CCNNGG	3 cut(s)	228, 852, 1242
BssHII	GCGCGC	1 cut(s)	1290
BssMI	GATC	2 cut(s)	328, 1231
BssNI	GRCGYC	1 cut(s)	1206
BssT1I	CCWWGG	2 cut(s)	852, 1242
Bst2UI	CCWGG	2 cut(s)	737, 984
Bst4CI	ACNGT	2 cut(s)	232, 427
Bst6I	CTCTTC	3 cut(s)	62, 573, 812
BstACI	GRCGYC	1 cut(s)	1206
BstBAI	YACGTR	1 cut(s)	1301
BstC8I	GCNNGC	7 cut(s)	167, 554, 558, 750, 1292, 1306, 1338
BstDEI	CTNAG	7 cut(s)	23, 89, 179, 219, 561, 603, 621
BstDSI	CCRYGG	1 cut(s)	228
BstF5I	GGATG	6 cut(s)	502, 513, 538, 1004, 1288, 1352
BstFNI	CGCG	3 cut(s)	359, 782, 1292
BstHHI	GCGC	4 cut(s)	361, 1169, 1292, 1294
BstKTI	GATC	2 cut(s)	331, 1234
BstMAI	GTCTC	2 cut(s)	644, 671
BstMBI	GATC	2 cut(s)	328, 1231
BstMWI	GCNNNNNNNGC	7 cut(s)	153, 162, 209, 319, 836, 1205, 1337
BstNI	CCWGG	2 cut(s)	737, 984
BstNSI	RCATGY	1 cut(s)	761
BstSCI	CCNGG	4 cut(s)	366, 430, 735, 982
BstSLI	GKGCMC	1 cut(s)	1086
BstUI	CGCG	3 cut(s)	359, 782, 1292
BstV1I	GCAGC	6 cut(s)	190, 340, 613, 1305, 1327, 1374
BstX2I	RGATCY	1 cut(s)	1231
BstYI	RGATCY	1 cut(s)	1231
BsuRI	GGCC	5 cut(s)	128, 224, 538, 785, 1084
BtgI	CCRYGG	1 cut(s)	228
BtgZI	GCGATG	1 cut(s)	1239
BtsCI	GGATG	6 cut(s)	502, 513, 538, 1004, 1288, 1352
BtsI	GCAGTG	5 cut(s)	12, 315, 567, 930, 955
BveI	ACCTGC	1 cut(s)	437
Cac8I	GCNNGC	7 cut(s)	167, 554, 558, 750, 1292, 1306, 1338
CfoI	GCGC	4 cut(s)	361, 1169, 1292, 1294
Cfr13I	GGNCC	6 cut(s)	126, 536, 1082, 1083, 1239, 1262
CseI	GACGC	1 cut(s)	1214
Csp6I	GTAC	1 cut(s)	565
CviAII	CATG	2 cut(s)	518, 758
CviQI	GTAC	1 cut(s)	565
DdeI	CTNAG	7 cut(s)	23, 89, 179, 219, 561, 603, 621
DpnI	GATC	2 cut(s)	330, 1233
DpnII	GATC	2 cut(s)	328, 1231
DraI	TTTAAA	1 cut(s)	487
DraIII	CACNNNGTG	1 cut(s)	1301
DrdI	GACNNNNNNGTC	2 cut(s)	332, 1169
DseDI	GACNNNNNNGTC	2 cut(s)	332, 1169
EaeI	YGGCCR	1 cut(s)	783
Eam1104I	CTCTTC	3 cut(s)	62, 573, 812
EarI	CTCTTC	3 cut(s)	62, 573, 812
Eco130I	CCWWGG	2 cut(s)	852, 1242
Eco24I	GRGCYC	1 cut(s)	1086
Eco31I	GGTCTC	1 cut(s)	671
Eco47I	GGWCC	2 cut(s)	1239, 1262
Eco57I	CTGAAG	2 cut(s)	973, 1043
EcoO109I	RGGNCCY	3 cut(s)	1082, 1083, 1239
EcoRII	CCWGG	2 cut(s)	735, 982
EcoT14I	CCWWGG	2 cut(s)	852, 1242
EcoT38I	GRGCYC	1 cut(s)	1086
ErhI	CCWWGG	2 cut(s)	852, 1242
FaeI	CATG	2 cut(s)	521, 761
FaqI	GGGAC	1 cut(s)	524
FatI	CATG	2 cut(s)	517, 757
FauI	CCCGC	1 cut(s)	1329
FblI	GTMKAC	1 cut(s)	1203
FokI	GGATG	6 cut(s)	500, 509, 545, 991, 1295, 1359
FriOI	GRGCYC	1 cut(s)	1086
FspBI	CTAG	3 cut(s)	192, 611, 749
GlaI	GCGC	4 cut(s)	360, 1168, 1291, 1293
GsuI	CTGGAG	2 cut(s)	827, 966
HaeIII	GGCC	5 cut(s)	128, 224, 538, 785, 1084
HapII	CCGG	2 cut(s)	368, 431
HgaI	GACGC	1 cut(s)	1214
HhaI	GCGC	4 cut(s)	361, 1169, 1292, 1294
Hin1I	GRCGYC	1 cut(s)	1206
Hin1II	CATG	2 cut(s)	521, 761
Hin6I	GCGC	4 cut(s)	359, 1167, 1290, 1292
HinP1I	GCGC	4 cut(s)	359, 1167, 1290, 1292
HincII	GTYRAC	2 cut(s)	373, 1204
HindII	GTYRAC	2 cut(s)	373, 1204
HindIII	AAGCTT	2 cut(s)	145, 525
HinfI	GANTC	9 cut(s)	93, 410, 469, 607, 726, 742, 777, 993, 1372
HpaII	CCGG	2 cut(s)	368, 431
HphI	GGTGA	4 cut(s)	469, 751, 946, 1069
Hpy166II	GTNNAC	3 cut(s)	373, 567, 1204
Hpy188I	TCNGA	7 cut(s)	92, 180, 241, 423, 731, 992, 1377
Hpy188III	TCNNGA	9 cut(s)	286, 337, 379, 400, 611, 649, 668, 774, 1021
Hpy8I	GTNNAC	3 cut(s)	373, 567, 1204
Hpy99I	CGWCG	4 cut(s)	241, 1109, 1166, 1208
HpyAV	CCTTC	7 cut(s)	241, 454, 922, 935, 1048, 1096, 1273
HpyCH4III	ACNGT	2 cut(s)	232, 427
HpyCH4IV	ACGT	2 cut(s)	104, 1300
HpyCH4V	TGCA	7 cut(s)	308, 446, 593, 644, 971, 1184, 1199
HpyF10VI	GCNNNNNNNGC	7 cut(s)	153, 162, 209, 319, 836, 1205, 1337
HpyF3I	CTNAG	7 cut(s)	23, 89, 179, 219, 561, 603, 621
HpySE526I	ACGT	2 cut(s)	104, 1300
Hsp92I	GRCGYC	1 cut(s)	1206
Hsp92II	CATG	2 cut(s)	521, 761
HspAI	GCGC	4 cut(s)	359, 1167, 1290, 1292
Kzo9I	GATC	2 cut(s)	328, 1231
LguI	GCTCTTC	1 cut(s)	812
LmnI	GCTCC	5 cut(s)	32, 174, 767, 1013, 1315
Lsp1109I	GCAGC	6 cut(s)	190, 340, 613, 1305, 1327, 1374
LweI	GCATC	1 cut(s)	889
MaeI	CTAG	3 cut(s)	192, 611, 749
MaeII	ACGT	2 cut(s)	104, 1300
MaeIII	GTNAC	5 cut(s)	105, 112, 194, 973, 1000
MalI	GATC	2 cut(s)	330, 1233
MboI	GATC	2 cut(s)	328, 1231
MboII	GAAGA	5 cut(s)	49, 590, 829, 878, 1036
MfeI	CAATTG	1 cut(s)	840
MflI	RGATCY	1 cut(s)	1231
MhlI	GDGCHC	1 cut(s)	1086
MluCI	AATT	3 cut(s)	317, 840, 869
MlyI	GAGTC	5 cut(s)	404, 478, 735, 786, 1366
MmeI	TCCRAC	3 cut(s)	219, 446, 709
MseI	TTAA	4 cut(s)	342, 363, 486, 872
MslI	CAYNNNNRTG	1 cut(s)	230
MspI	CCGG	2 cut(s)	368, 431
MspR9I	CCNGG	4 cut(s)	368, 432, 737, 984
MunI	CAATTG	1 cut(s)	840
MvaI	CCWGG	2 cut(s)	737, 984
MvnI	CGCG	3 cut(s)	359, 782, 1292
MwoI	GCNNNNNNNGC	7 cut(s)	153, 162, 209, 319, 836, 1205, 1337
NciI	CCSGG	2 cut(s)	368, 432
NdeII	GATC	2 cut(s)	328, 1231
NheI	GCTAGC	1 cut(s)	748
NlaIII	CATG	2 cut(s)	521, 761
NlaIV	GGNNCC	3 cut(s)	234, 1084, 1240
NmuCI	GTSAC	1 cut(s)	1000
NspI	RCATGY	1 cut(s)	761
OliI	CACNNNNGTG	1 cut(s)	230
PalAI	GGCGCGCC	1 cut(s)	1290
PaqCI	CACCTGC	1 cut(s)	437
PauI	GCGCGC	1 cut(s)	1290
PciI	ACATGT	1 cut(s)	757
PciSI	GCTCTTC	1 cut(s)	812
PcsI	WCGNNNNNNNCGW	2 cut(s)	1170, 1373
PfeI	GAWTC	4 cut(s)	93, 607, 742, 993
PfoI	TCCNGGA	1 cut(s)	430
PleI	GAGTC	5 cut(s)	404, 477, 734, 785, 1366
PpsI	GAGTC	5 cut(s)	404, 477, 734, 785, 1366
Ppu21I	YACGTR	1 cut(s)	1301
PpuMI	RGGWCCY	1 cut(s)	1239
PscI	ACATGT	1 cut(s)	757
Psp5II	RGGWCCY	1 cut(s)	1239
Psp6I	CCWGG	2 cut(s)	735, 982
PspGI	CCWGG	2 cut(s)	735, 982
PspN4I	GGNNCC	3 cut(s)	234, 1084, 1240
PspOMI	GGGCCC	1 cut(s)	1082
PspPI	GGNCC	6 cut(s)	126, 536, 1082, 1083, 1239, 1262
PspPPI	RGGWCCY	1 cut(s)	1239
PsuI	RGATCY	1 cut(s)	1231
PteI	GCGCGC	1 cut(s)	1290
RsaI	GTAC	1 cut(s)	566
RsaNI	GTAC	1 cut(s)	565
RseI	CAYNNNNRTG	1 cut(s)	230
SalI	GTCGAC	1 cut(s)	1202
SapI	GCTCTTC	1 cut(s)	812
SaqAI	TTAA	4 cut(s)	342, 363, 486, 872
Sau3AI	GATC	2 cut(s)	328, 1231
Sau96I	GGNCC	6 cut(s)	126, 536, 1082, 1083, 1239, 1262
SchI	GAGTC	5 cut(s)	404, 478, 735, 786, 1366
ScrFI	CCNGG	4 cut(s)	368, 432, 737, 984
SduI	GDGCHC	1 cut(s)	1086
SfaNI	GCATC	1 cut(s)	889
SgsI	GGCGCGCC	1 cut(s)	1290
SinI	GGWCC	2 cut(s)	1239, 1262
SmiMI	CAYNNNNRTG	1 cut(s)	230
Sse9I	AATT	3 cut(s)	317, 840, 869
SsiI	CCGC	6 cut(s)	357, 416, 782, 945, 1336, 1390
SspMI	CTAG	3 cut(s)	192, 611, 749
StyD4I	CCNGG	4 cut(s)	366, 430, 735, 982
StyI	CCWWGG	2 cut(s)	852, 1242
TaaI	ACNGT	2 cut(s)	232, 427
TaiI	ACGT	2 cut(s)	107, 1303
TaqI	TCGA	9 cut(s)	648, 669, 1107, 1125, 1135, 1161, 1173, 1188, 1203
TasI	AATT	3 cut(s)	317, 840, 869
TatI	WGTACW	1 cut(s)	564
TauI	GCSGC	4 cut(s)	359, 785, 948, 1393
TfiI	GAWTC	4 cut(s)	93, 607, 742, 993
Tru1I	TTAA	4 cut(s)	342, 363, 486, 872
Tru9I	TTAA	4 cut(s)	342, 363, 486, 872
TseFI	GTSAC	1 cut(s)	1000
TseI	GCWGC	6 cut(s)	203, 353, 626, 1318, 1340, 1387
Tsp45I	GTSAC	1 cut(s)	1000
TspDTI	ATGAA	4 cut(s)	260, 513, 1241, 1292
VpaK11BI	GGWCC	2 cut(s)	1239, 1262
XbaI	TCTAGA	1 cut(s)	610
XceI	RCATGY	1 cut(s)	761
XmiI	GTMKAC	1 cut(s)	1203
XspI	CTAG	3 cut(s)	192, 611, 749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.