RLG00000021355

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000803
Physical Location & Seq
Reverse (-)
74425538 .. 74429627
4090 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021355

Sequence Viewer

Length: 627 bp
ATGGGAAGCAAGCAGCCCAAGGGGTCGGTCAGGCCATTGCTGAAGCAGAAAAACCAGAGCACAGATCGAGAGATAGGGGCAGACAAAGACGCCTTGAGATTGGTTGGCATGGGTTGTGTTTGTCGCCATCACACGGGAGTGACGCTAGGACTAGTTGCTGCATCGGCGACGTCTGCTGCTTCCGCACCAATTACGCTCCAAAACCTCCGGTCCAATCTCAAAATCTCCATCCCCTCTTCATACTTCGCCACCGCCCTCGTCATCTTCCTCGGCGACTACTGCGACTGCGGTCTAGACACCAATGAAGTCCTTGACTTCTTCGTTGCTCTCCCCTCCAGATACCCATTTCAGAAAGACGTCTTCATCGCCGGAAACCATGACTTCTCCTTCGCTTCCTTCTTGAGAGTCCTGCCTCCGCCGCCGGACTGGTCCGAGTTCCACGAGGAGTGGAAGGAGTTCGAGGACAATGAGGAGAGAGAAGGCATACATGCTACTCATCTAATCGTCCTCTTCTTCGACATAAGGGATGGGATACCAGGCTTCAGTTGGCATTATCAGTACAATGACTTTGTTTTTTACCACGACCCTGCTGTGGACAGCATGGCCGTCATTGCGGTTGGTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

209

Amino Acids

23.14

Weight (kDa)

5.26

Isoelectric Point (pI)

37.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 85 - 162 6.7e-08 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 173, 360
AciI CCGC 6 cut(s) 183, 252, 288, 416, 419, 614
AcoI YGGCCR 1 cut(s) 603
AcuI CTGAAG 2 cut(s) 62, 526
AcyI GRCGYC 3 cut(s) 90, 170, 357
AfaI GTAC 1 cut(s) 560
AfiI CCNNNNNNNGG 2 cut(s) 133, 592
AhlI ACTAGT 1 cut(s) 151
AjnI CCWGG 1 cut(s) 535
AleI CACNNNNGTG 1 cut(s) 137
Alw21I GWGCWC 1 cut(s) 62
AoxI GGCC 2 cut(s) 32, 603
ApeKI GCWGC 3 cut(s) 13, 158, 176
ArsI GACNNNNNNTTYG 2 cut(s) 371, 403
Asp700I GAANNNNTTC 1 cut(s) 455
AspS9I GGNCC 2 cut(s) 210, 429
AvaII GGWCC 2 cut(s) 210, 429
BauI CACGAG 1 cut(s) 440
BbsI GAAGAC 1 cut(s) 352
Bbv12I GWGCWC 1 cut(s) 62
BbvI GCAGC 3 cut(s) 25, 145, 163
BccI CCATC 3 cut(s) 135, 236, 521
BceAI ACGGC 1 cut(s) 590
BciT130I CCWGG 1 cut(s) 537
BciVI GTATCC 1 cut(s) 525
BcuI ACTAGT 1 cut(s) 151
BfaI CTAG 3 cut(s) 146, 152, 293
BfuI GTATCC 1 cut(s) 525
BisI GCNGC 4 cut(s) 14, 159, 177, 419
BlsI GCNGC 4 cut(s) 15, 160, 178, 420
Bme1390I CCNGG 1 cut(s) 537
Bme18I GGWCC 2 cut(s) 210, 429
BmgT120I GGNCC 2 cut(s) 210, 429
BmrFI CCNGG 1 cut(s) 537
BmsI GCATC 1 cut(s) 170
BoxI GACNNNNGTC 1 cut(s) 288
BpiI GAAGAC 1 cut(s) 352
BpmI CTGGAG 1 cut(s) 319
BpuEI CTTGAG 2 cut(s) 115, 421
BsaHI GRCGYC 3 cut(s) 90, 170, 357
BsaJI CCNNGG 2 cut(s) 18, 268
BsaWI WCCGGW 1 cut(s) 207
Bsc4I CCNNNNNNNGG 2 cut(s) 133, 592
Bse1I ACTGG 1 cut(s) 431
Bse3DI GCAATG 2 cut(s) 35, 609
BseBI CCWGG 1 cut(s) 537
BseDI CCNNGG 2 cut(s) 18, 268
BseGI GGATG 2 cut(s) 228, 532
BseLI CCNNNNNNNGG 2 cut(s) 133, 592
BseMI GCAATG 2 cut(s) 35, 609
BseNI ACTGG 1 cut(s) 431
BseRI GAGGAG 2 cut(s) 458, 485
BseXI GCAGC 3 cut(s) 25, 145, 163
BshFI GGCC 2 cut(s) 34, 605
BsiHKAI GWGCWC 1 cut(s) 62
BsiSI CCGG 3 cut(s) 208, 369, 422
BslI CCNNNNNNNGG 2 cut(s) 133, 592
BsnI GGCC 2 cut(s) 34, 605
Bsp1286I GDGCHC 1 cut(s) 62
Bsp143I GATC 1 cut(s) 64
BspACI CCGC 6 cut(s) 183, 252, 288, 416, 419, 614
BspANI GGCC 2 cut(s) 34, 605
BsrDI GCAATG 2 cut(s) 35, 609
BsrI ACTGG 1 cut(s) 431
BssECI CCNNGG 2 cut(s) 18, 268
BssMI GATC 1 cut(s) 64
BssNI GRCGYC 3 cut(s) 90, 170, 357
BssSI CACGAG 1 cut(s) 440
BssT1I CCWWGG 1 cut(s) 18
Bst2BI CACGAG 1 cut(s) 440
Bst2UI CCWGG 1 cut(s) 537
Bst6I CTCTTC 2 cut(s) 241, 515
BstACI GRCGYC 3 cut(s) 90, 170, 357
BstC8I GCNNGC 1 cut(s) 11
BstF5I GGATG 2 cut(s) 228, 532
BstKTI GATC 1 cut(s) 67
BstMBI GATC 1 cut(s) 64
BstMWI GCNNNNNNNGC 6 cut(s) 164, 173, 182, 279, 418, 611
BstNI CCWGG 1 cut(s) 537
BstNSI RCATGY 1 cut(s) 491
BstPAI GACNNNNGTC 1 cut(s) 288
BstSCI CCNGG 1 cut(s) 535
BstV1I GCAGC 3 cut(s) 25, 145, 163
BstV2I GAAGAC 1 cut(s) 352
BsuI GTATCC 1 cut(s) 525
BsuRI GGCC 2 cut(s) 34, 605
BtgZI GCGATG 1 cut(s) 349
BtsCI GGATG 2 cut(s) 228, 532
Cac8I GCNNGC 1 cut(s) 11
Cfr13I GGNCC 2 cut(s) 210, 429
CseI GACGC 2 cut(s) 98, 151
Csp6I GTAC 1 cut(s) 559
CviAII CATG 4 cut(s) 109, 377, 488, 601
CviJI RGCY 4 cut(s) 16, 34, 540, 605
CviKI_1 RGCY 4 cut(s) 16, 34, 540, 605
CviQI GTAC 1 cut(s) 559
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
EaeI YGGCCR 1 cut(s) 603
Eam1104I CTCTTC 2 cut(s) 241, 515
EarI CTCTTC 2 cut(s) 241, 515
EciI GGCGGA 1 cut(s) 405
Eco130I CCWWGG 1 cut(s) 18
Eco47I GGWCC 2 cut(s) 210, 429
Eco57I CTGAAG 2 cut(s) 62, 526
EcoRII CCWGG 1 cut(s) 535
EcoT14I CCWWGG 1 cut(s) 18
ErhI CCWWGG 1 cut(s) 18
FaeI CATG 4 cut(s) 112, 380, 491, 604
FaiI YATR 7 cut(s) 110, 241, 378, 485, 489, 521, 602
FatI CATG 4 cut(s) 108, 376, 487, 600
Fnu4HI GCNGC 4 cut(s) 14, 159, 177, 419
FokI GGATG 2 cut(s) 215, 539
Fsp4HI GCNGC 4 cut(s) 14, 159, 177, 419
FspBI CTAG 3 cut(s) 146, 152, 293
GluI GCNGC 4 cut(s) 14, 159, 177, 419
GsuI CTGGAG 1 cut(s) 319
HaeIII GGCC 2 cut(s) 34, 605
HapII CCGG 3 cut(s) 208, 369, 422
HgaI GACGC 2 cut(s) 98, 151
Hin1I GRCGYC 3 cut(s) 90, 170, 357
Hin1II CATG 4 cut(s) 112, 380, 491, 604
HinfI GANTC 1 cut(s) 405
HpaII CCGG 3 cut(s) 208, 369, 422
Hpy166II GTNNAC 1 cut(s) 595
Hpy188I TCNGA 2 cut(s) 351, 433
Hpy188III TCNNGA 4 cut(s) 68, 293, 336, 400
Hpy8I GTNNAC 1 cut(s) 595
Hpy99I CGWCG 1 cut(s) 172
HpyAV CCTTC 4 cut(s) 397, 406, 445, 473
HpyCH4IV ACGT 2 cut(s) 170, 357
HpyCH4V TGCA 1 cut(s) 161
HpyF10VI GCNNNNNNNGC 6 cut(s) 164, 173, 182, 279, 418, 611
HpySE526I ACGT 2 cut(s) 170, 357
Hsp92I GRCGYC 3 cut(s) 90, 170, 357
Hsp92II CATG 4 cut(s) 112, 380, 491, 604
Kzo9I GATC 1 cut(s) 64
LmnI GCTCC 1 cut(s) 201
Lsp1109I GCAGC 3 cut(s) 25, 145, 163
LweI GCATC 1 cut(s) 170
MaeI CTAG 3 cut(s) 146, 152, 293
MaeII ACGT 2 cut(s) 170, 357
MaeIII GTNAC 1 cut(s) 139
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 6 cut(s) 228, 256, 310, 352, 502, 505
MhlI GDGCHC 1 cut(s) 62
MluCI AATT 1 cut(s) 189
MlyI GAGTC 1 cut(s) 414
MroXI GAANNNNTTC 1 cut(s) 455
MslI CAYNNNNRTG 1 cut(s) 137
MspI CCGG 3 cut(s) 208, 369, 422
MspR9I CCNGG 1 cut(s) 537
MvaI CCWGG 1 cut(s) 537
MwoI GCNNNNNNNGC 6 cut(s) 164, 173, 182, 279, 418, 611
NdeII GATC 1 cut(s) 64
NlaIII CATG 4 cut(s) 112, 380, 491, 604
NmeAIII GCCGAG 1 cut(s) 249
NmuCI GTSAC 1 cut(s) 139
NspI RCATGY 1 cut(s) 491
OliI CACNNNNGTG 1 cut(s) 137
PdmI GAANNNNTTC 1 cut(s) 455
PkrI GCNGC 4 cut(s) 15, 160, 178, 420
PleI GAGTC 1 cut(s) 413
PpsI GAGTC 1 cut(s) 413
PshAI GACNNNNGTC 1 cut(s) 288
Psp6I CCWGG 1 cut(s) 535
PspGI CCWGG 1 cut(s) 535
PspPI GGNCC 2 cut(s) 210, 429
RsaI GTAC 1 cut(s) 560
RsaNI GTAC 1 cut(s) 559
RseI CAYNNNNRTG 1 cut(s) 137
SatI GCNGC 4 cut(s) 14, 159, 177, 419
Sau3AI GATC 1 cut(s) 64
Sau96I GGNCC 2 cut(s) 210, 429
SchI GAGTC 1 cut(s) 414
ScrFI CCNGG 1 cut(s) 537
SduI GDGCHC 1 cut(s) 62
SetI ASST 3 cut(s) 173, 207, 360
SfaNI GCATC 1 cut(s) 170
SinI GGWCC 2 cut(s) 210, 429
SmiMI CAYNNNNRTG 1 cut(s) 137
SmlI CTYRAG 2 cut(s) 94, 400
SmoI CTYRAG 2 cut(s) 94, 400
SpeI ACTAGT 1 cut(s) 151
Sse9I AATT 1 cut(s) 189
SsiI CCGC 6 cut(s) 183, 252, 288, 416, 419, 614
SspMI CTAG 3 cut(s) 146, 152, 293
StyD4I CCNGG 1 cut(s) 535
StyI CCWWGG 1 cut(s) 18
TaiI ACGT 2 cut(s) 173, 360
TaqI TCGA 3 cut(s) 67, 459, 516
TaqII GACCGA 1 cut(s) 16
TasI AATT 1 cut(s) 189
TatI WGTACW 1 cut(s) 558
TauI GCSGC 1 cut(s) 421
TseFI GTSAC 1 cut(s) 139
TseI GCWGC 3 cut(s) 13, 158, 176
Tsp45I GTSAC 1 cut(s) 139
TspDTI ATGAA 3 cut(s) 228, 318, 352
VpaK11BI GGWCC 2 cut(s) 210, 429
XbaI TCTAGA 1 cut(s) 292
XceI RCATGY 1 cut(s) 491
XcmI CCANNNNNNNNNTGG 1 cut(s) 543
XmnI GAANNNNTTC 1 cut(s) 455
XspI CTAG 3 cut(s) 146, 152, 293
ZraI GACGTC 2 cut(s) 171, 358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.