Rh5BG060700

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000803
Physical Location & Seq
Forward (+)
5006908 .. 5008339
1432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG060700.1

Sequence Viewer

Length: 309 bp
ATGTCAGACCCAAAACCCAGACTTGTCTGTTGCATCGGCGACGTCCACGGCTTCCACACCAACGAAGTCCTTGACTTCTTCGTCGCTCTCCCCTCCAGATACCCACGTCAGAAAGACGTCTTCATCGCCGGAAACCATGACTTCGCCTTCGCCGCCTTGTTGAGAGTCCTGCCTCTGCCGCCGGACGGGTCCGAGTTCCGCGAGGAGTGGAAGGAGTTCGAGGACAAGGAGGAGAGAGAAAAAGATCTGGAGACAGATCTGGATCAGGAGACAGAGAAAGGGCAAGAAGATCAACACTTTTTTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

102

Amino Acids

11.91

Weight (kDa)

4.58

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 80
AatII GACGTC 2 cut(s) 45, 120
AccII CGCG 1 cut(s) 201
AciI CCGC 3 cut(s) 153, 179, 199
AclWI GGATC 1 cut(s) 270
AcyI GRCGYC 2 cut(s) 42, 117
AfiI CCNNNNNNNGG 1 cut(s) 185
AjiI CACGTC 1 cut(s) 107
Alw26I GTCTC 2 cut(s) 245, 263
AlwI GGATC 1 cut(s) 270
ArsI GACNNNNNNTTYG 2 cut(s) 131, 163
Asp700I GAANNNNTTC 1 cut(s) 215
AspS9I GGNCC 1 cut(s) 189
AvaII GGWCC 1 cut(s) 189
BaeI ACNNNNGTAYC 2 cut(s) 91, 124
BbsI GAAGAC 1 cut(s) 112
BceAI ACGGC 1 cut(s) 64
BcoDI GTCTC 2 cut(s) 245, 263
BglII AGATCT 2 cut(s) 244, 256
BisI GCNGC 2 cut(s) 153, 179
BlsI GCNGC 2 cut(s) 154, 180
Bme18I GGWCC 1 cut(s) 189
BmgBI CACGTC 1 cut(s) 107
BmgT120I GGNCC 1 cut(s) 189
BmiI GGNNCC 1 cut(s) 190
BmsI GCATC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 112
BpmI CTGGAG 2 cut(s) 79, 269
BsaBI GATNNNNATC 1 cut(s) 261
BsaHI GRCGYC 2 cut(s) 42, 117
BsaJI CCNNGG 1 cut(s) 46
Bsc4I CCNNNNNNNGG 1 cut(s) 185
Bse8I GATNNNNATC 1 cut(s) 261
BseDI CCNNGG 1 cut(s) 46
BseJI GATNNNNATC 1 cut(s) 261
BseLI CCNNNNNNNGG 1 cut(s) 185
BseRI GAGGAG 2 cut(s) 218, 245
Bsh1236I CGCG 1 cut(s) 201
BsiSI CCGG 2 cut(s) 129, 182
BslI CCNNNNNNNGG 1 cut(s) 185
BsmAI GTCTC 2 cut(s) 245, 263
Bsp143I GATC 4 cut(s) 244, 256, 262, 289
BspACI CCGC 3 cut(s) 153, 179, 199
BspFNI CGCG 1 cut(s) 201
BspLI GGNNCC 1 cut(s) 190
BspPI GGATC 1 cut(s) 270
BssECI CCNNGG 1 cut(s) 46
BssMI GATC 4 cut(s) 244, 256, 262, 289
BssNI GRCGYC 2 cut(s) 42, 117
BstACI GRCGYC 2 cut(s) 42, 117
BstDSI CCRYGG 1 cut(s) 46
BstFNI CGCG 1 cut(s) 201
BstKTI GATC 4 cut(s) 247, 259, 265, 292
BstMAI GTCTC 2 cut(s) 245, 263
BstMBI GATC 4 cut(s) 244, 256, 262, 289
BstMWI GCNNNNNNNGC 2 cut(s) 152, 178
BstUI CGCG 1 cut(s) 201
BstV2I GAAGAC 1 cut(s) 112
BstX2I RGATCY 2 cut(s) 244, 256
BstYI RGATCY 2 cut(s) 244, 256
BtgI CCRYGG 1 cut(s) 46
BtgZI GCGATG 1 cut(s) 109
BtrI CACGTC 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 189
CviAII CATG 1 cut(s) 137
CviJI RGCY 1 cut(s) 51
CviKI_1 RGCY 1 cut(s) 51
DpnI GATC 4 cut(s) 246, 258, 264, 291
DpnII GATC 4 cut(s) 244, 256, 262, 289
DrdI GACNNNNNNGTC 1 cut(s) 80
DseDI GACNNNNNNGTC 1 cut(s) 80
Eco47I GGWCC 1 cut(s) 189
FaeI CATG 1 cut(s) 140
FaiI YATR 2 cut(s) 138, 307
FatI CATG 1 cut(s) 136
Fnu4HI GCNGC 2 cut(s) 153, 179
Fsp4HI GCNGC 2 cut(s) 153, 179
GluI GCNGC 2 cut(s) 153, 179
GsuI CTGGAG 2 cut(s) 79, 269
HapII CCGG 2 cut(s) 129, 182
Hin1I GRCGYC 2 cut(s) 42, 117
Hin1II CATG 1 cut(s) 140
HinfI GANTC 1 cut(s) 165
HpaII CCGG 2 cut(s) 129, 182
Hpy166II GTNNAC 1 cut(s) 46
Hpy188I TCNGA 3 cut(s) 7, 111, 193
Hpy188III TCNNGA 4 cut(s) 96, 248, 260, 266
Hpy8I GTNNAC 1 cut(s) 46
Hpy99I CGWCG 2 cut(s) 44, 86
HpyAV CCTTC 2 cut(s) 157, 205
HpyCH4IV ACGT 3 cut(s) 42, 106, 117
HpyCH4V TGCA 2 cut(s) 33, 305
HpyF10VI GCNNNNNNNGC 2 cut(s) 152, 178
HpySE526I ACGT 3 cut(s) 42, 106, 117
Hsp92I GRCGYC 2 cut(s) 42, 117
Hsp92II CATG 1 cut(s) 140
Kzo9I GATC 4 cut(s) 244, 256, 262, 289
LpnPI CCDG 8 cut(s) 31, 109, 142, 182, 195, 233, 245, 251
LweI GCATC 1 cut(s) 42
MaeII ACGT 3 cut(s) 42, 106, 117
MalI GATC 4 cut(s) 246, 258, 264, 291
MboI GATC 4 cut(s) 244, 256, 262, 289
MboII GAAGA 3 cut(s) 70, 112, 299
MflI RGATCY 2 cut(s) 244, 256
MlyI GAGTC 1 cut(s) 174
MnlI CCTC 5 cut(s) 103, 183, 196, 214, 223
MroXI GAANNNNTTC 1 cut(s) 215
MspI CCGG 2 cut(s) 129, 182
MvnI CGCG 1 cut(s) 201
MwoI GCNNNNNNNGC 2 cut(s) 152, 178
NdeII GATC 4 cut(s) 244, 256, 262, 289
NlaIII CATG 1 cut(s) 140
NlaIV GGNNCC 1 cut(s) 190
PdmI GAANNNNTTC 1 cut(s) 215
PkrI GCNGC 2 cut(s) 154, 180
PleI GAGTC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 173
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 1 cut(s) 189
PsuI RGATCY 2 cut(s) 244, 256
SatI GCNGC 2 cut(s) 153, 179
Sau3AI GATC 4 cut(s) 244, 256, 262, 289
Sau96I GGNCC 1 cut(s) 189
SchI GAGTC 1 cut(s) 174
SetI ASST 3 cut(s) 45, 109, 120
SfaNI GCATC 1 cut(s) 42
SinI GGWCC 1 cut(s) 189
SsiI CCGC 3 cut(s) 153, 179, 199
TaiI ACGT 3 cut(s) 45, 109, 120
TaqI TCGA 1 cut(s) 219
TauI GCSGC 2 cut(s) 155, 181
TspDTI ATGAA 1 cut(s) 112
VpaK11BI GGWCC 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 215
ZraI GACGTC 2 cut(s) 43, 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.