Rh3AG244900

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0000803
Physical Location & Seq
Forward (+)
25957759 .. 25958545
787 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG244900.1

Sequence Viewer

Length: 435 bp
ATGTCAGACCCAAAACCCAGACTAGTCTGTTGCATCGGCGACGTCCACGGCTTCCACACCAAGCTCCAAAATCTCTGGTCCAATCTCGAAATCTCCATCCCTTCTTCAGACTTCGCCACTGCCCTCGTCATCTTCCTCGACGACTACTGCGGCCGCGGCCTGAACACCAACGAAGTCCTTGACTTCTTCATCGCTCTCCCCTCCAGATACCCACGTCAGAAAGACGTCTTCATCGCCGGAAACCATGACTTCACCTTCGCCGCCTTGTTGAAAGTCCTGCCTCTGCCACCGGACGGGTCCGAGTTCTGCGAGGGGTGGAAGGAGTTCAAGGACAAGGAGGAGAGAGAAAAAGATCTGGAGACAGAGAAAGGGCAAGAAGATGATTCTCTGAATTATACTTTATTTCACACGGACTCCGTGTGTAAATTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

144

Amino Acids

16.41

Weight (kDa)

4.73

Isoelectric Point (pI)

28.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 9 - 94 7.5e-08 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 45, 228
AccII CGCG 1 cut(s) 156
AciI CCGC 4 cut(s) 150, 154, 156, 261
AcoI YGGCCR 1 cut(s) 151
AcuI CTGAAG 1 cut(s) 90
AcyI GRCGYC 2 cut(s) 42, 225
AfiI CCNNNNNNNGG 1 cut(s) 293
AgsI TTSAA 2 cut(s) 271, 328
AhlI ACTAGT 1 cut(s) 22
AjiI CACGTC 1 cut(s) 215
AluBI AGCT 1 cut(s) 64
AluI AGCT 1 cut(s) 64
Alw26I GTCTC 1 cut(s) 353
AoxI GGCC 2 cut(s) 151, 157
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
Asp700I GAANNNNTTC 1 cut(s) 323
AspS9I GGNCC 2 cut(s) 78, 297
AsuHPI GGTGA 1 cut(s) 244
AvaII GGWCC 2 cut(s) 78, 297
BaeI ACNNNNGTAYC 2 cut(s) 199, 232
BbsI GAAGAC 1 cut(s) 220
BccI CCATC 1 cut(s) 104
BceAI ACGGC 1 cut(s) 64
BcoDI GTCTC 1 cut(s) 353
BcuI ACTAGT 1 cut(s) 22
BfaI CTAG 1 cut(s) 23
BglII AGATCT 1 cut(s) 352
BisI GCNGC 4 cut(s) 151, 154, 157, 261
BlsI GCNGC 4 cut(s) 152, 155, 158, 262
Bme18I GGWCC 2 cut(s) 78, 297
BmgBI CACGTC 1 cut(s) 215
BmgT120I GGNCC 2 cut(s) 78, 297
BmiI GGNNCC 1 cut(s) 298
BmsI GCATC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 220
BpmI CTGGAG 2 cut(s) 187, 377
BsaHI GRCGYC 2 cut(s) 42, 225
BsaJI CCNNGG 2 cut(s) 46, 154
BsaWI WCCGGW 1 cut(s) 289
BsaXI ACNNNNNCTCC 2 cut(s) 398, 428
Bsc4I CCNNNNNNNGG 1 cut(s) 293
BseDI CCNNGG 2 cut(s) 46, 154
BseGI GGATG 1 cut(s) 96
BseLI CCNNNNNNNGG 1 cut(s) 293
BseRI GAGGAG 1 cut(s) 353
BseX3I CGGCCG 1 cut(s) 151
Bsh1236I CGCG 1 cut(s) 156
Bsh1285I CGRYCG 1 cut(s) 154
BshFI GGCC 2 cut(s) 153, 159
BsiEI CGRYCG 1 cut(s) 154
BsiSI CCGG 2 cut(s) 237, 290
BslI CCNNNNNNNGG 1 cut(s) 293
BsmAI GTCTC 1 cut(s) 353
BsnI GGCC 2 cut(s) 153, 159
Bsp143I GATC 1 cut(s) 352
BspACI CCGC 4 cut(s) 150, 154, 156, 261
BspANI GGCC 2 cut(s) 153, 159
BspFNI CGCG 1 cut(s) 156
BspLI GGNNCC 1 cut(s) 298
BssECI CCNNGG 2 cut(s) 46, 154
BssMI GATC 1 cut(s) 352
BssNI GRCGYC 2 cut(s) 42, 225
BstACI GRCGYC 2 cut(s) 42, 225
BstDSI CCRYGG 2 cut(s) 46, 154
BstF5I GGATG 1 cut(s) 96
BstFNI CGCG 1 cut(s) 156
BstKTI GATC 1 cut(s) 355
BstMAI GTCTC 1 cut(s) 353
BstMBI GATC 1 cut(s) 352
BstMCI CGRYCG 1 cut(s) 154
BstMWI GCNNNNNNNGC 1 cut(s) 156
BstUI CGCG 1 cut(s) 156
BstV2I GAAGAC 1 cut(s) 220
BstX2I RGATCY 1 cut(s) 352
BstYI RGATCY 1 cut(s) 352
BstZI CGGCCG 1 cut(s) 151
BsuRI GGCC 2 cut(s) 153, 159
BtgI CCRYGG 2 cut(s) 46, 154
BtgZI GCGATG 2 cut(s) 175, 217
BtrI CACGTC 1 cut(s) 215
BtsCI GGATG 1 cut(s) 96
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 1 cut(s) 117
CciNI GCGGCCGC 1 cut(s) 151
Cfr13I GGNCC 2 cut(s) 78, 297
Cfr42I CCGCGG 1 cut(s) 157
CviAII CATG 1 cut(s) 245
CviJI RGCY 4 cut(s) 51, 64, 153, 159
CviKI_1 RGCY 4 cut(s) 51, 64, 153, 159
DpnI GATC 1 cut(s) 354
DpnII GATC 1 cut(s) 352
EaeI YGGCCR 1 cut(s) 151
EagI CGGCCG 1 cut(s) 151
EclXI CGGCCG 1 cut(s) 151
Eco47I GGWCC 2 cut(s) 78, 297
Eco52I CGGCCG 1 cut(s) 151
Eco57I CTGAAG 1 cut(s) 90
FaeI CATG 1 cut(s) 248
FaiI YATR 2 cut(s) 246, 396
FatI CATG 1 cut(s) 244
Fnu4HI GCNGC 4 cut(s) 151, 154, 157, 261
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 4 cut(s) 151, 154, 157, 261
FspBI CTAG 1 cut(s) 23
GluI GCNGC 4 cut(s) 151, 154, 157, 261
GsuI CTGGAG 2 cut(s) 187, 377
HaeIII GGCC 2 cut(s) 153, 159
HapII CCGG 2 cut(s) 237, 290
Hin1I GRCGYC 2 cut(s) 42, 225
Hin1II CATG 1 cut(s) 248
HinfI GANTC 2 cut(s) 383, 413
HpaII CCGG 2 cut(s) 237, 290
HphI GGTGA 1 cut(s) 244
Hpy166II GTNNAC 1 cut(s) 46
Hpy188I TCNGA 5 cut(s) 7, 109, 219, 301, 390
Hpy188III TCNNGA 3 cut(s) 86, 204, 356
Hpy8I GTNNAC 1 cut(s) 46
Hpy99I CGWCG 2 cut(s) 44, 143
HpyAV CCTTC 3 cut(s) 111, 265, 313
HpyCH4IV ACGT 3 cut(s) 42, 214, 225
HpyCH4V TGCA 1 cut(s) 33
HpyF10VI GCNNNNNNNGC 1 cut(s) 156
HpySE526I ACGT 3 cut(s) 42, 214, 225
Hsp92I GRCGYC 2 cut(s) 42, 225
Hsp92II CATG 1 cut(s) 248
KspI CCGCGG 1 cut(s) 157
Kzo9I GATC 1 cut(s) 352
LmnI GCTCC 1 cut(s) 69
LpnPI CCDG 8 cut(s) 31, 61, 173, 217, 250, 290, 303, 341
LweI GCATC 1 cut(s) 42
MaeI CTAG 1 cut(s) 23
MaeII ACGT 3 cut(s) 42, 214, 225
MalI GATC 1 cut(s) 354
MboI GATC 1 cut(s) 352
MboII GAAGA 5 cut(s) 96, 124, 178, 220, 389
MflI RGATCY 1 cut(s) 352
MluCI AATT 2 cut(s) 391, 425
MlyI GAGTC 1 cut(s) 407
MnlI CCTC 6 cut(s) 134, 146, 211, 291, 304, 331
MroXI GAANNNNTTC 1 cut(s) 323
MspA1I CMGCKG 1 cut(s) 156
MspI CCGG 2 cut(s) 237, 290
MvnI CGCG 1 cut(s) 156
MwoI GCNNNNNNNGC 1 cut(s) 156
NdeII GATC 1 cut(s) 352
NlaIII CATG 1 cut(s) 248
NlaIV GGNNCC 1 cut(s) 298
NotI GCGGCCGC 1 cut(s) 151
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 1 cut(s) 383
PkrI GCNGC 4 cut(s) 152, 155, 158, 262
PleI GAGTC 1 cut(s) 407
PpsI GAGTC 1 cut(s) 407
PspN4I GGNNCC 1 cut(s) 298
PspPI GGNCC 2 cut(s) 78, 297
PsuI RGATCY 1 cut(s) 352
SacII CCGCGG 1 cut(s) 157
SatI GCNGC 4 cut(s) 151, 154, 157, 261
Sau3AI GATC 1 cut(s) 352
Sau96I GGNCC 2 cut(s) 78, 297
SchI GAGTC 1 cut(s) 407
SetI ASST 5 cut(s) 45, 66, 217, 228, 257
SfaNI GCATC 1 cut(s) 42
Sfr303I CCGCGG 1 cut(s) 157
SgrBI CCGCGG 1 cut(s) 157
SinI GGWCC 2 cut(s) 78, 297
SpeI ACTAGT 1 cut(s) 22
Sse9I AATT 2 cut(s) 391, 425
SsiI CCGC 4 cut(s) 150, 154, 156, 261
SspMI CTAG 1 cut(s) 23
TaiI ACGT 3 cut(s) 45, 217, 228
TaqI TCGA 2 cut(s) 87, 138
TasI AATT 2 cut(s) 391, 425
TauI GCSGC 4 cut(s) 153, 156, 159, 263
TfiI GAWTC 1 cut(s) 383
TscAI CASTG 1 cut(s) 124
TspDTI ATGAA 2 cut(s) 178, 220
TspGWI ACGGA 2 cut(s) 406, 425
TspRI CASTG 1 cut(s) 124
VpaK11BI GGWCC 2 cut(s) 78, 297
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 1 cut(s) 23
ZraI GACGTC 2 cut(s) 43, 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.