Rh7AG396900

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000803
Physical Location & Seq
Reverse (-)
52057858 .. 52061451
3594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG396900.1

Sequence Viewer

Length: 321 bp
ATGTCAGACCCAAAACCCAAACTAGTCTGTAGCATCGGCGACGTCCACGGCTTCCACACCAAGCTCCAAAATCTCTGGTCCAATCTCGAAATCTCCATCCCTTCTTCAGACTTCGCCACCGCCCTCGTCATCTTCCTCGGCGACTACTGCGGCAGAGGCCCGGACACCAACGAAGTCCTTGACTTCTTCGTCGCTCTCCCCTCCAGATACCCACATCAGAAAGACGTCTTCATCGCCGGAAACCATGACTTCGCCTTCGCCGCCTTGTTGAGAGTCCTGCCTCTGCCACCGGATGGGTCCGAGTTCCGCGAGGGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

106

Amino Acids

11.72

Weight (kDa)

5.38

Isoelectric Point (pI)

26.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 12 - 84 1.3e-10 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 188
AatII GACGTC 2 cut(s) 45, 228
AccB7I CCANNNNNTGG 1 cut(s) 293
AccII CGCG 1 cut(s) 309
AciI CCGC 4 cut(s) 120, 150, 261, 307
AcuI CTGAAG 1 cut(s) 90
AcyI GRCGYC 2 cut(s) 42, 225
AfiI CCNNNNNNNGG 1 cut(s) 293
AhlI ACTAGT 1 cut(s) 22
AluBI AGCT 1 cut(s) 64
AluI AGCT 1 cut(s) 64
AoxI GGCC 1 cut(s) 157
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
AspS9I GGNCC 3 cut(s) 78, 158, 297
AsuC2I CCSGG 1 cut(s) 161
AvaII GGWCC 2 cut(s) 78, 297
BbsI GAAGAC 1 cut(s) 220
BccI CCATC 2 cut(s) 104, 287
BceAI ACGGC 1 cut(s) 64
BcnI CCSGG 1 cut(s) 161
BcuI ACTAGT 1 cut(s) 22
BfaI CTAG 1 cut(s) 23
BfmI CTRYAG 1 cut(s) 28
BisI GCNGC 2 cut(s) 151, 261
BlsI GCNGC 2 cut(s) 152, 262
Bme1390I CCNGG 1 cut(s) 161
Bme18I GGWCC 2 cut(s) 78, 297
BmgT120I GGNCC 3 cut(s) 78, 158, 297
BmiI GGNNCC 1 cut(s) 298
BmrFI CCNGG 1 cut(s) 161
BmsI GCATC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 220
BpmI CTGGAG 1 cut(s) 187
BpuMI CCSGG 1 cut(s) 161
BsaHI GRCGYC 2 cut(s) 42, 225
BsaJI CCNNGG 2 cut(s) 46, 136
BsaWI WCCGGW 1 cut(s) 289
Bsc4I CCNNNNNNNGG 1 cut(s) 293
BseDI CCNNGG 2 cut(s) 46, 136
BseGI GGATG 2 cut(s) 96, 298
BseLI CCNNNNNNNGG 1 cut(s) 293
Bsh1236I CGCG 1 cut(s) 309
BshFI GGCC 1 cut(s) 159
BsiSI CCGG 3 cut(s) 161, 237, 290
BslI CCNNNNNNNGG 1 cut(s) 293
BsnI GGCC 1 cut(s) 159
BspACI CCGC 4 cut(s) 120, 150, 261, 307
BspANI GGCC 1 cut(s) 159
BspFNI CGCG 1 cut(s) 309
BspLI GGNNCC 1 cut(s) 298
BssECI CCNNGG 2 cut(s) 46, 136
BssNI GRCGYC 2 cut(s) 42, 225
BstACI GRCGYC 2 cut(s) 42, 225
BstDSI CCRYGG 1 cut(s) 46
BstF5I GGATG 2 cut(s) 96, 298
BstFNI CGCG 1 cut(s) 309
BstMWI GCNNNNNNNGC 3 cut(s) 147, 156, 260
BstSCI CCNGG 1 cut(s) 159
BstSFI CTRYAG 1 cut(s) 28
BstUI CGCG 1 cut(s) 309
BstV2I GAAGAC 1 cut(s) 220
BsuRI GGCC 1 cut(s) 159
BtgI CCRYGG 1 cut(s) 46
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 2 cut(s) 96, 298
Cfr13I GGNCC 3 cut(s) 78, 158, 297
CviAII CATG 1 cut(s) 245
CviJI RGCY 3 cut(s) 51, 64, 159
CviKI_1 RGCY 3 cut(s) 51, 64, 159
DrdI GACNNNNNNGTC 1 cut(s) 188
DseDI GACNNNNNNGTC 1 cut(s) 188
Eco47I GGWCC 2 cut(s) 78, 297
Eco57I CTGAAG 1 cut(s) 90
FaeI CATG 1 cut(s) 248
FaiI YATR 1 cut(s) 246
FatI CATG 1 cut(s) 244
Fnu4HI GCNGC 2 cut(s) 151, 261
FokI GGATG 2 cut(s) 83, 305
Fsp4HI GCNGC 2 cut(s) 151, 261
FspBI CTAG 1 cut(s) 23
GluI GCNGC 2 cut(s) 151, 261
GsuI CTGGAG 1 cut(s) 187
HaeIII GGCC 1 cut(s) 159
HapII CCGG 3 cut(s) 161, 237, 290
Hin1I GRCGYC 2 cut(s) 42, 225
Hin1II CATG 1 cut(s) 248
HinfI GANTC 1 cut(s) 273
HpaII CCGG 3 cut(s) 161, 237, 290
Hpy166II GTNNAC 1 cut(s) 46
Hpy188I TCNGA 4 cut(s) 7, 109, 219, 301
Hpy188III TCNNGA 2 cut(s) 86, 204
Hpy8I GTNNAC 1 cut(s) 46
Hpy99I CGWCG 2 cut(s) 44, 194
HpyAV CCTTC 2 cut(s) 111, 265
HpyCH4IV ACGT 2 cut(s) 42, 225
HpyF10VI GCNNNNNNNGC 3 cut(s) 147, 156, 260
HpySE526I ACGT 2 cut(s) 42, 225
Hsp92I GRCGYC 2 cut(s) 42, 225
Hsp92II CATG 1 cut(s) 248
LmnI GCTCC 1 cut(s) 69
LpnPI CCDG 6 cut(s) 61, 174, 217, 250, 290, 303
LweI GCATC 1 cut(s) 42
MaeI CTAG 1 cut(s) 23
MaeII ACGT 2 cut(s) 42, 225
MboII GAAGA 4 cut(s) 96, 124, 178, 220
MlyI GAGTC 1 cut(s) 282
MnlI CCTC 6 cut(s) 134, 146, 149, 211, 291, 304
MspI CCGG 3 cut(s) 161, 237, 290
MspR9I CCNGG 1 cut(s) 161
MvnI CGCG 1 cut(s) 309
MwoI GCNNNNNNNGC 3 cut(s) 147, 156, 260
NciI CCSGG 1 cut(s) 161
NlaIII CATG 1 cut(s) 248
NlaIV GGNNCC 1 cut(s) 298
NmeAIII GCCGAG 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 293
PkrI GCNGC 2 cut(s) 152, 262
PleI GAGTC 1 cut(s) 281
PpsI GAGTC 1 cut(s) 281
PspN4I GGNNCC 1 cut(s) 298
PspPI GGNCC 3 cut(s) 78, 158, 297
SatI GCNGC 2 cut(s) 151, 261
Sau96I GGNCC 3 cut(s) 78, 158, 297
SchI GAGTC 1 cut(s) 282
ScrFI CCNGG 1 cut(s) 161
SetI ASST 3 cut(s) 45, 66, 228
SfaNI GCATC 1 cut(s) 42
SfcI CTRYAG 1 cut(s) 28
SinI GGWCC 2 cut(s) 78, 297
SpeI ACTAGT 1 cut(s) 22
SsiI CCGC 4 cut(s) 120, 150, 261, 307
SspMI CTAG 1 cut(s) 23
StyD4I CCNGG 1 cut(s) 159
TaiI ACGT 2 cut(s) 45, 228
TaqI TCGA 1 cut(s) 87
TauI GCSGC 2 cut(s) 153, 263
TspDTI ATGAA 1 cut(s) 220
Van91I CCANNNNNTGG 1 cut(s) 293
VpaK11BI GGWCC 2 cut(s) 78, 297
XspI CTAG 1 cut(s) 23
ZraI GACGTC 2 cut(s) 43, 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.