Rmu_sc0004185.1_g000006

Calcineurin-like phosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004185.1
OG0000803
Physical Location & Seq
Reverse (-)
29750 .. 30145
396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004185.1_g000006.1.cds

Sequence Viewer

Length: 396 bp
atgtcagacccaaaacccagactagtctgttgcatcggctacgtccatggcttccacaccaagctccaaaatctctggtccaatctcgaaatctccatcccttctttagacttcgccactgccctcgtcatcttcctcggcgactactgcggcagcgaccctaacaccaacgaagtccttgacttcttcgtcgctttcccctccaaatacccacatcagaaagacgtcttcatcgccggaaaccatgacttcgccttcgccgccttgttgagagtcctgcctctgccaccggactggtccgagttccgcgaggggtggaaggagttcgaggataaggaggagagagaaaaagatctggagcagatctggagacagagagagggcaagaagatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

131

Amino Acids

15.26

Weight (kDa)

5.16

Isoelectric Point (pI)

32.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 188
AatII GACGTC 1 cut(s) 228
AccII CGCG 1 cut(s) 309
AciI CCGC 3 cut(s) 150, 261, 307
AcyI GRCGYC 1 cut(s) 225
AhlI ACTAGT 1 cut(s) 22
AluBI AGCT 1 cut(s) 64
AluI AGCT 1 cut(s) 64
Alw26I GTCTC 1 cut(s) 364
ApeKI GCWGC 1 cut(s) 153
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
Asp700I GAANNNNTTC 1 cut(s) 323
AspS9I GGNCC 2 cut(s) 78, 297
AvaII GGWCC 2 cut(s) 78, 297
BbsI GAAGAC 1 cut(s) 220
BbvI GCAGC 1 cut(s) 165
BccI CCATC 1 cut(s) 104
BcoDI GTCTC 1 cut(s) 364
BcuI ACTAGT 1 cut(s) 22
BfaI CTAG 1 cut(s) 23
BglII AGATCT 2 cut(s) 352, 363
BisI GCNGC 3 cut(s) 151, 154, 261
BlsI GCNGC 3 cut(s) 152, 155, 262
Bme18I GGWCC 2 cut(s) 78, 297
BmgT120I GGNCC 2 cut(s) 78, 297
BmsI GCATC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 220
BpmI CTGGAG 2 cut(s) 377, 388
BsaHI GRCGYC 1 cut(s) 225
BsaJI CCNNGG 2 cut(s) 46, 136
BsaWI WCCGGW 1 cut(s) 289
Bse1I ACTGG 1 cut(s) 299
BseDI CCNNGG 2 cut(s) 46, 136
BseGI GGATG 1 cut(s) 96
BseNI ACTGG 1 cut(s) 299
BseRI GAGGAG 1 cut(s) 353
BseXI GCAGC 1 cut(s) 165
Bsh1236I CGCG 1 cut(s) 309
BsiSI CCGG 2 cut(s) 237, 290
BsmAI GTCTC 1 cut(s) 364
Bsp143I GATC 2 cut(s) 352, 363
Bsp19I CCATGG 1 cut(s) 46
BspACI CCGC 3 cut(s) 150, 261, 307
BspFNI CGCG 1 cut(s) 309
BsrI ACTGG 1 cut(s) 299
BssECI CCNNGG 2 cut(s) 46, 136
BssMI GATC 2 cut(s) 352, 363
BssNI GRCGYC 1 cut(s) 225
BssT1I CCWWGG 1 cut(s) 46
BstACI GRCGYC 1 cut(s) 225
BstDSI CCRYGG 1 cut(s) 46
BstF5I GGATG 1 cut(s) 96
BstFNI CGCG 1 cut(s) 309
BstKTI GATC 2 cut(s) 355, 366
BstMAI GTCTC 1 cut(s) 364
BstMBI GATC 2 cut(s) 352, 363
BstMWI GCNNNNNNNGC 2 cut(s) 147, 260
BstUI CGCG 1 cut(s) 309
BstV1I GCAGC 1 cut(s) 165
BstV2I GAAGAC 1 cut(s) 220
BstX2I RGATCY 2 cut(s) 352, 363
BstXI CCANNNNNNTGG 1 cut(s) 294
BstYI RGATCY 2 cut(s) 352, 363
BtgI CCRYGG 1 cut(s) 46
BtgZI GCGATG 1 cut(s) 217
BtsCI GGATG 1 cut(s) 96
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 1 cut(s) 117
Cfr13I GGNCC 2 cut(s) 78, 297
CviAII CATG 2 cut(s) 47, 245
CviJI RGCY 3 cut(s) 39, 51, 64
CviKI_1 RGCY 3 cut(s) 39, 51, 64
DpnI GATC 2 cut(s) 354, 365
DpnII GATC 2 cut(s) 352, 363
DrdI GACNNNNNNGTC 1 cut(s) 188
DseDI GACNNNNNNGTC 1 cut(s) 188
Eco130I CCWWGG 1 cut(s) 46
Eco47I GGWCC 2 cut(s) 78, 297
EcoT14I CCWWGG 1 cut(s) 46
ErhI CCWWGG 1 cut(s) 46
FaeI CATG 2 cut(s) 50, 248
FaiI YATR 2 cut(s) 48, 246
FatI CATG 2 cut(s) 46, 244
Fnu4HI GCNGC 3 cut(s) 151, 154, 261
FokI GGATG 1 cut(s) 83
Fsp4HI GCNGC 3 cut(s) 151, 154, 261
FspBI CTAG 1 cut(s) 23
GluI GCNGC 3 cut(s) 151, 154, 261
GsuI CTGGAG 2 cut(s) 377, 388
HapII CCGG 2 cut(s) 237, 290
Hin1I GRCGYC 1 cut(s) 225
Hin1II CATG 2 cut(s) 50, 248
HinfI GANTC 1 cut(s) 273
HpaII CCGG 2 cut(s) 237, 290
Hpy188I TCNGA 3 cut(s) 7, 219, 301
Hpy188III TCNNGA 3 cut(s) 86, 356, 367
Hpy99I CGWCG 1 cut(s) 194
HpyAV CCTTC 3 cut(s) 111, 265, 313
HpyCH4IV ACGT 2 cut(s) 42, 225
HpyCH4V TGCA 1 cut(s) 33
HpyF10VI GCNNNNNNNGC 2 cut(s) 147, 260
HpySE526I ACGT 2 cut(s) 42, 225
Hsp92I GRCGYC 1 cut(s) 225
Hsp92II CATG 2 cut(s) 50, 248
Kzo9I GATC 2 cut(s) 352, 363
LmnI GCTCC 2 cut(s) 69, 358
LpnPI CCDG 8 cut(s) 31, 61, 250, 280, 290, 303, 341, 352
Lsp1109I GCAGC 1 cut(s) 165
LweI GCATC 1 cut(s) 42
MaeI CTAG 1 cut(s) 23
MaeII ACGT 2 cut(s) 42, 225
MalI GATC 2 cut(s) 354, 365
MboI GATC 2 cut(s) 352, 363
MboII GAAGA 3 cut(s) 124, 178, 220
MflI RGATCY 2 cut(s) 352, 363
MlyI GAGTC 1 cut(s) 282
MnlI CCTC 8 cut(s) 134, 146, 211, 291, 304, 322, 331, 373
MroXI GAANNNNTTC 1 cut(s) 323
MspI CCGG 2 cut(s) 237, 290
MvnI CGCG 1 cut(s) 309
MwoI GCNNNNNNNGC 2 cut(s) 147, 260
NcoI CCATGG 1 cut(s) 46
NdeII GATC 2 cut(s) 352, 363
NlaIII CATG 2 cut(s) 50, 248
NmeAIII GCCGAG 1 cut(s) 117
PdmI GAANNNNTTC 1 cut(s) 323
PkrI GCNGC 3 cut(s) 152, 155, 262
PleI GAGTC 1 cut(s) 281
PpsI GAGTC 1 cut(s) 281
PspPI GGNCC 2 cut(s) 78, 297
PsuI RGATCY 2 cut(s) 352, 363
SatI GCNGC 3 cut(s) 151, 154, 261
Sau3AI GATC 2 cut(s) 352, 363
Sau96I GGNCC 2 cut(s) 78, 297
SchI GAGTC 1 cut(s) 282
SetI ASST 3 cut(s) 45, 66, 228
SfaNI GCATC 1 cut(s) 42
SinI GGWCC 2 cut(s) 78, 297
SpeI ACTAGT 1 cut(s) 22
SsiI CCGC 3 cut(s) 150, 261, 307
SspMI CTAG 1 cut(s) 23
StyI CCWWGG 1 cut(s) 46
TaiI ACGT 2 cut(s) 45, 228
TaqI TCGA 2 cut(s) 87, 327
TauI GCSGC 2 cut(s) 153, 263
TscAI CASTG 1 cut(s) 124
TseI GCWGC 1 cut(s) 153
TspDTI ATGAA 1 cut(s) 220
TspRI CASTG 1 cut(s) 124
VpaK11BI GGWCC 2 cut(s) 78, 297
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 1 cut(s) 23
ZraI GACGTC 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.