Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000675.1

Orthogroup ID

OG0000180

Physical Location & Seq

Genomic Coordinates Reverse (-)

80086 .. 86098

Gene Structure 6013 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000675.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1584 bp

atgataaaaaatcctaacctaacctatcccactaccgaagtatcgagagatcgagtcatcactcatcactcatcgtctcatcactcatccgcctctctcacactctcacagactctccgtctcaaacctctacttctccgccgccagccaccagatactcatcactcatcgtctcatcactcatccgcctctctcacactctcacagactctctcacagactctccgtctcaaacctctacttctccgccgccagccaccagatacttgcgacgactccagaccagttgatctatcttctccgccgcagatcaagatttgttccgcctcagatcgagacttgttccgccgcagatcgagacttgttccgccgcagatcgagactggttgctcctcatatcgagactggttgctcctcagatcgagacttgttcctcctcagatcctcagatcgacgtcgacgcagaaggtgtggtcgttggacttcgttccaagtcttcgtaatgcatccaccaccgacgcagaagctaaggtggccggagctgggagaacgaagaccggcgactggagatcgtttcagctcggcggcgcctcttcccggacttgcagcagcctccaccgtgctccccgtgctatatggattccacagacgtgtattagggagtgcggtgaacaaaacccactgaagaaatcgacctatggtggccggaaggtgaagaaattggccggcgaagaaatccggcccataaatttcgccaaaactatttcagaaattcgacccatcgggcctccacccacagctacagtgaggaccttgatccggggcaagcccacatacggcccacctgccacagcttatcccttccgtaatttaccggaatcagatctactttcagctaaagctgtctgccacagcgcctcgagattctctcggtccccttacacgctctccacgcgccaacagcttttccgaagcacccaagcagccgggagtagtgccaacacgcctatcaggccgaccaataaccggtggactcccaaaccagctcaactaagaatccttcaggggctctactattacaagggtcacaagtacccaactccagagcagattcaagagatctgtcttcatctgaaaccgtatggtcagatcgaggacaagaacgtcttcttttggtttcagaacctcaaggctcgtgagaggcagaagtccattgatctcaactttggttctactggttctactggtgatgatggatcaatcgatctaacccttgggtcatgcgtcgtctatggtgttgacccatattcctcctcacccttcaacgctaatatcagtactacctcttttggcccaacaggaggacaatcttccatggaacaacgaggaggagatcaccaggaggtcgaaactcttcccctgttccccatgcacggtgaggacgtccttggtaacccgaacactgcatccgaggaaggtagcgtatatggttactattccggtggctcgggcggttacaacagtggctctcacgtttctcttgagctcagtctcaacccttccggagctgctgatttggcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

527

Amino Acids

57.98

Weight (kDa)

9.67

Isoelectric Point (pI)

56.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000180)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr0c19g0499991 RchiOBHm_Chr0c19g0500021 RchiOBHm_Chr0c19g0500131 RchiOBHm_Chr0c31g0501321 RchiOBHm_Chr0c31g0501441 RchiOBHm_Chr1g0365611 RchiOBHm_Chr1g0366061 RchiOBHm_Chr1g0367951 RchiOBHm_Chr1g0369471 RchiOBHm_Chr1g0377271 RchiOBHm_Chr1g0379021 RchiOBHm_Chr1g0379461 RchiOBHm_Chr1g0381431 RchiOBHm_Chr1g0383551 RchiOBHm_Chr1g0383621 RchiOBHm_Chr2g0120951 RchiOBHm_Chr2g0121321 RchiOBHm_Chr2g0121381 RchiOBHm_Chr2g0121801 RchiOBHm_Chr2g0121861 RchiOBHm_Chr2g0122211 RchiOBHm_Chr2g0122471 RchiOBHm_Chr2g0122511 RchiOBHm_Chr2g0122751 RchiOBHm_Chr2g0123361 RchiOBHm_Chr2g0124071 RchiOBHm_Chr2g0124341 RchiOBHm_Chr2g0124361 RchiOBHm_Chr2g0124511 RchiOBHm_Chr2g0124641 RchiOBHm_Chr2g0125051 RchiOBHm_Chr2g0125111 RchiOBHm_Chr2g0125641 RchiOBHm_Chr2g0125871 RchiOBHm_Chr2g0125901 RchiOBHm_Chr2g0126011 RchiOBHm_Chr2g0126291 RchiOBHm_Chr2g0126341 RchiOBHm_Chr2g0126611 RchiOBHm_Chr2g0126671 RchiOBHm_Chr2g0126701 RchiOBHm_Chr2g0127021 RchiOBHm_Chr2g0127071 RchiOBHm_Chr2g0127361 RchiOBHm_Chr2g0127691 RchiOBHm_Chr2g0128041 RchiOBHm_Chr2g0128051 RchiOBHm_Chr2g0128061 RchiOBHm_Chr2g0128141 RchiOBHm_Chr2g0128171 RchiOBHm_Chr2g0128181 RchiOBHm_Chr2g0128551 RchiOBHm_Chr2g0128991 RchiOBHm_Chr2g0130061 RchiOBHm_Chr2g0130391 RchiOBHm_Chr2g0130631 RchiOBHm_Chr2g0130921 RchiOBHm_Chr2g0132731 RchiOBHm_Chr2g0133461 RchiOBHm_Chr2g0133921 RchiOBHm_Chr2g0134031 RchiOBHm_Chr2g0134281 RchiOBHm_Chr2g0134351 RchiOBHm_Chr2g0135501 RchiOBHm_Chr2g0135821 RchiOBHm_Chr2g0135931 RchiOBHm_Chr2g0137501 RchiOBHm_Chr2g0139141 RchiOBHm_Chr2g0139511 RchiOBHm_Chr2g0142411 RchiOBHm_Chr2g0143261 RchiOBHm_Chr2g0144171 RchiOBHm_Chr2g0144741 RchiOBHm_Chr2g0144841 RchiOBHm_Chr2g0145021 RchiOBHm_Chr2g0145831 RchiOBHm_Chr2g0145881 RchiOBHm_Chr2g0146081 RchiOBHm_Chr2g0146141 RchiOBHm_Chr2g0146671 RchiOBHm_Chr2g0149001 RchiOBHm_Chr2g0151811 RchiOBHm_Chr2g0151821 RchiOBHm_Chr2g0151831 RchiOBHm_Chr2g0152051 RchiOBHm_Chr2g0154791 RchiOBHm_Chr2g0155541 RchiOBHm_Chr2g0160791 RchiOBHm_Chr2g0161631 RchiOBHm_Chr2g0162151 RchiOBHm_Chr2g0162751 RchiOBHm_Chr2g0166561 RchiOBHm_Chr2g0166751 RchiOBHm_Chr2g0168891 RchiOBHm_Chr2g0170211 RchiOBHm_Chr2g0170781 RchiOBHm_Chr2g0172831 RchiOBHm_Chr2g0174791 RchiOBHm_Chr3g0448081 RchiOBHm_Chr3g0449761 RchiOBHm_Chr3g0453291 RchiOBHm_Chr3g0456271 RchiOBHm_Chr3g0456461 RchiOBHm_Chr3g0458351 RchiOBHm_Chr3g0461411 RchiOBHm_Chr3g0461511 RchiOBHm_Chr3g0463871 RchiOBHm_Chr3g0467841 RchiOBHm_Chr3g0470081 RchiOBHm_Chr3g0470571 RchiOBHm_Chr7g0187061 RchiOBHm_Chr7g0187461 RchiOBHm_Chr7g0187681 RchiOBHm_Chr7g0189901 RchiOBHm_Chr7g0190271 RchiOBHm_Chr7g0193451 RchiOBHm_Chr7g0194081 RchiOBHm_Chr7g0195771 RchiOBHm_Chr7g0196301 RchiOBHm_Chr7g0196911
rosa_multiflora	Rmu_sc0000236.1_g000047 Rmu_sc0000284.1_g000007 Rmu_sc0000288.1_g000006 Rmu_sc0000507.1_g000017 Rmu_sc0000580.1_g000015 Rmu_sc0000663.1_g000011 Rmu_sc0000675.1_g000024 Rmu_sc0000693.1_g000072 Rmu_sc0000779.1_g000005 Rmu_sc0000851.1_g000015 Rmu_sc0000962.1_g000001 Rmu_sc0001493.1_g000055 Rmu_sc0001669.1_g000025 Rmu_sc0001891.1_g000051 Rmu_sc0001926.1_g000007 Rmu_sc0002082.1_g000025 Rmu_sc0002141.1_g000001 Rmu_sc0002141.1_g000004 Rmu_sc0002414.1_g000012 Rmu_sc0002557.1_g000022 Rmu_sc0002709.1_g000038 Rmu_sc0002897.1_g000004 Rmu_sc0002934.1_g000055 Rmu_sc0003692.1_g000017 Rmu_sc0004283.1_g000068 Rmu_sc0004598.1_g000010 Rmu_sc0004614.1_g000004 Rmu_sc0004805.1_g000006 Rmu_sc0005142.1_g000041 Rmu_sc0005777.1_g000001 Rmu_sc0006420.1_g000019 Rmu_sc0006803.1_g000016 Rmu_sc0007034.1_g000015 Rmu_sc0008079.1_g000017 Rmu_sc0008148.1_g000040 Rmu_sc0008608.1_g000007 Rmu_sc0008675.1_g000001 Rmu_sc0009663.1_g000001 Rmu_sc0010188.1_g000003 Rmu_sc0010739.1_g000005 Rmu_sc0016265.1_g000001 Rmu_sc0031757.1_g000001 Rmu_ssc0000087.1_g000024 Rmu_ssc0000438.1_g000029
rosa_roxburghii	Rroxscaffold_1G00003350
rosa_rugosa	Rorug03G0248400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	853
AasI	GACNNNNNNGTC	1 cut(s)	1163
AatII	GACGTC	2 cut(s)	458, 1446
Acc36I	ACCTGC	1 cut(s)	853
AccB1I	GGYRCC	1 cut(s)	587
AccI	GTMKAC	1 cut(s)	458
AccII	CGCG	1 cut(s)	955
AccIII	TCCGGA	1 cut(s)	1562
AclWI	GGATC	3 cut(s)	436, 811, 1264
AcoI	YGGCCR	3 cut(s)	534, 703, 723
AcsI	RAATTY	2 cut(s)	748, 771
AcuI	CTGAAG	2 cut(s)	704, 1046
AcyI	GRCGYC	3 cut(s)	455, 588, 1443
AfaI	GTAC	2 cut(s)	1094, 1339
AfiI	CCNNNNNNNGG	8 cut(s)	543, 564, 597, 819, 836, 1026, 1361, 1433
AflIII	ACRYGT	1 cut(s)	650
AgeI	ACCGGT	1 cut(s)	1026
AgsI	TTSAA	2 cut(s)	1115, 1324
AhdI	GACNNNNNGTC	2 cut(s)	117, 225
AjiI	CACGTC	1 cut(s)	651
AjnI	CCWGG	1 cut(s)	1398
AleI	CACNNNNGTG	1 cut(s)	649
AloI	GAACNNNNNNTCC	2 cut(s)	1451, 1483
Alw21I	GWGCWC	2 cut(s)	625, 1548
AlwI	GGATC	3 cut(s)	436, 811, 1264
Ama87I	CYCGRG	2 cut(s)	919, 1507
Aor13HI	TCCGGA	1 cut(s)	1562
AoxI	GGCC	8 cut(s)	534, 703, 723, 740, 785, 838, 1013, 1351
ApeKI	GCWGC	4 cut(s)	606, 609, 983, 1568
ApoI	RAATTY	2 cut(s)	748, 771
AsiGI	ACCGGT	1 cut(s)	1026
Asp700I	GAANNNNTTC	2 cut(s)	1166, 1413
AspLEI	GCGC	3 cut(s)	590, 917, 957
AspS9I	GGNCC	6 cut(s)	741, 785, 810, 839, 933, 1352
AsuC2I	CCSGG	3 cut(s)	598, 821, 988
AsuHPI	GGTGA	6 cut(s)	680, 724, 1259, 1308, 1388, 1448
AvaI	CYCGRG	2 cut(s)	919, 1507
AvaII	GGWCC	2 cut(s)	810, 933
BaeI	ACNNNNGTAYC	2 cut(s)	24, 57
BanI	GGYRCC	1 cut(s)	587
BanII	GRGCYC	2 cut(s)	1071, 1548
BauI	CACGAG	1 cut(s)	1194
BbsI	GAAGAC	4 cut(s)	488, 560, 1118, 1159
Bbv12I	GWGCWC	2 cut(s)	625, 1548
BbvI	GCAGC	4 cut(s)	618, 621, 995, 1555
BccI	CCATC	2 cut(s)	788, 1247
BceAI	ACGGC	1 cut(s)	853
BciT130I	CCWGG	1 cut(s)	1400
BcnI	CCSGG	3 cut(s)	598, 821, 988
BfmI	CTRYAG	1 cut(s)	801
BfoI	RGCGCY	2 cut(s)	591, 918
BfuAI	ACCTGC	1 cut(s)	853
BglI	GCCNNNNNGGC	1 cut(s)	1012
BglII	AGATCT	2 cut(s)	883, 1119
BmcAI	AGTACT	1 cut(s)	1339
Bme1390I	CCNGG	4 cut(s)	598, 821, 988, 1400
Bme18I	GGWCC	2 cut(s)	810, 933
BmeRI	GACNNNNNGTC	2 cut(s)	117, 225
BmeT110I	CYCGRG	2 cut(s)	919, 1507
BmgBI	CACGTC	1 cut(s)	651
BmgT120I	GGNCC	6 cut(s)	741, 785, 810, 839, 933, 1352
BmiI	GGNNCC	2 cut(s)	589, 935
BmrFI	CCNGG	4 cut(s)	598, 821, 988, 1400
BmsI	GCATC	2 cut(s)	515, 1475
BpiI	GAAGAC	4 cut(s)	488, 560, 1118, 1159
BplI	GAGNNNNNCTC	2 cut(s)	913, 945
BpmI	CTGGAG	3 cut(s)	262, 586, 1086
Bpu10I	CCTNAGC	1 cut(s)	528
BpuEI	CTTGAG	2 cut(s)	1172, 1562
BpuMI	CCSGG	3 cut(s)	598, 821, 988
Bsa29I	ATCGAT	1 cut(s)	1263
BsaBI	GATNNNNATC	1 cut(s)	159
BsaHI	GRCGYC	3 cut(s)	455, 588, 1443
BsaJI	CCNNGG	5 cut(s)	820, 1273, 1374, 1447, 1470
BsaWI	WCCGGW	4 cut(s)	874, 1026, 1499, 1562
BsaXI	ACNNNNNCTCC	6 cut(s)	99, 129, 207, 237, 932, 962
Bsc4I	CCNNNNNNNGG	8 cut(s)	543, 564, 597, 819, 836, 1026, 1361, 1433
Bse118I	RCCGGY	3 cut(s)	557, 725, 1026
Bse1I	ACTGG	6 cut(s)	284, 388, 410, 569, 1240, 1249
Bse8I	GATNNNNATC	1 cut(s)	159
BseAI	TCCGGA	1 cut(s)	1562
BseBI	CCWGG	1 cut(s)	1400
BseCI	ATCGAT	1 cut(s)	1263
BseDI	CCNNGG	5 cut(s)	820, 1273, 1374, 1447, 1470
BseGI	GGATG	4 cut(s)	86, 182, 506, 1466
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	8 cut(s)	543, 564, 597, 819, 836, 1026, 1361, 1433
BseMII	CTCAG	5 cut(s)	342, 430, 452, 460, 1561
BseNI	ACTGG	6 cut(s)	284, 388, 410, 569, 1240, 1249
BseRI	GAGGAG	6 cut(s)	382, 404, 426, 1303, 1401, 1404
BseXI	GCAGC	4 cut(s)	618, 621, 995, 1555
BseYI	CCCAGC	1 cut(s)	542
Bsh1236I	CGCG	1 cut(s)	955
BshFI	GGCC	8 cut(s)	536, 705, 725, 742, 787, 840, 1015, 1353
BshNI	GGYRCC	1 cut(s)	587
BshTI	ACCGGT	1 cut(s)	1026
BshVI	ATCGAT	1 cut(s)	1263
BsiHKAI	GWGCWC	2 cut(s)	625, 1548
BsiHKCI	CYCGRG	2 cut(s)	919, 1507
BslFI	GGGAC	1 cut(s)	919
BslI	CCNNNNNNNGG	8 cut(s)	543, 564, 597, 819, 836, 1026, 1361, 1433
BsmBI	CGTCTC	4 cut(s)	81, 125, 177, 233
BsmFI	GGGAC	1 cut(s)	919
BsnI	GGCC	8 cut(s)	536, 705, 725, 742, 787, 840, 1015, 1353
BsoBI	CYCGRG	2 cut(s)	919, 1507
Bsp1286I	GDGCHC	3 cut(s)	625, 1071, 1548
Bsp13I	TCCGGA	1 cut(s)	1562
Bsp19I	CCATGG	1 cut(s)	1374
BspANI	GGCC	8 cut(s)	536, 705, 725, 742, 787, 840, 1015, 1353
BspCNI	CTCAG	5 cut(s)	341, 429, 451, 459, 1560
BspDI	ATCGAT	1 cut(s)	1263
BspEI	TCCGGA	1 cut(s)	1562
BspFNI	CGCG	1 cut(s)	955
BspLI	GGNNCC	2 cut(s)	589, 935
BspMI	ACCTGC	1 cut(s)	853
BspPI	GGATC	3 cut(s)	436, 811, 1264
BspT107I	GGYRCC	1 cut(s)	587
BsrFI	RCCGGY	3 cut(s)	557, 725, 1026
BsrI	ACTGG	6 cut(s)	284, 388, 410, 569, 1240, 1249
BssAI	RCCGGY	3 cut(s)	557, 725, 1026
BssECI	CCNNGG	5 cut(s)	820, 1273, 1374, 1447, 1470
BssNI	GRCGYC	3 cut(s)	455, 588, 1443
BssSI	CACGAG	1 cut(s)	1194
BssT1I	CCWWGG	3 cut(s)	1273, 1374, 1447
Bst2BI	CACGAG	1 cut(s)	1194
Bst2UI	CCWGG	1 cut(s)	1400
Bst4CI	ACNGT	5 cut(s)	620, 805, 1140, 1436, 1523
Bst6I	CTCTTC	2 cut(s)	598, 1419
BstACI	GRCGYC	3 cut(s)	455, 588, 1443
BstC8I	GCNNGC	4 cut(s)	146, 254, 727, 827
BstDEI	CTNAG	8 cut(s)	328, 416, 438, 446, 528, 1052, 1547, 1581
BstDSI	CCRYGG	1 cut(s)	1374
BstEII	GGTNACC	1 cut(s)	1451
BstF5I	GGATG	4 cut(s)	86, 182, 506, 1466
BstFNI	CGCG	1 cut(s)	955
BstH2I	RGCGCY	2 cut(s)	591, 918
BstHHI	GCGC	3 cut(s)	590, 917, 957
BstMWI	GCNNNNNNNGC	6 cut(s)	533, 629, 952, 961, 1012, 1577
BstNI	CCWGG	1 cut(s)	1400
BstPI	GGTNACC	1 cut(s)	1451
BstSCI	CCNGG	4 cut(s)	596, 819, 986, 1398
BstSFI	CTRYAG	1 cut(s)	801
BstUI	CGCG	1 cut(s)	955
BstV1I	GCAGC	4 cut(s)	618, 621, 995, 1555
BstV2I	GAAGAC	4 cut(s)	488, 560, 1118, 1159
BstX2I	RGATCY	3 cut(s)	441, 883, 1119
BstYI	RGATCY	3 cut(s)	441, 883, 1119
Bsu15I	ATCGAT	1 cut(s)	1263
BsuRI	GGCC	8 cut(s)	536, 705, 725, 742, 787, 840, 1015, 1353
BsuTUI	ATCGAT	1 cut(s)	1263
BtgI	CCRYGG	1 cut(s)	1374
BtrI	CACGTC	1 cut(s)	651
BtsCI	GGATG	4 cut(s)	86, 182, 506, 1466
BtsI	GCAGTG	1 cut(s)	1461
BtsIMutI	CAGTG	4 cut(s)	680, 810, 1461, 1528
BveI	ACCTGC	1 cut(s)	853
Cac8I	GCNNGC	4 cut(s)	146, 254, 727, 827
CfoI	GCGC	3 cut(s)	590, 917, 957
Cfr10I	RCCGGY	3 cut(s)	557, 725, 1026
Cfr13I	GGNCC	6 cut(s)	741, 785, 810, 839, 933, 1352
ClaI	ATCGAT	1 cut(s)	1263
CseI	GACGC	3 cut(s)	469, 527, 1273
Csp6I	GTAC	2 cut(s)	1093, 1338
CspAI	ACCGGT	1 cut(s)	1026
CviAII	CATG	3 cut(s)	1281, 1375, 1429
CviQI	GTAC	2 cut(s)	1093, 1338
DdeI	CTNAG	8 cut(s)	328, 416, 438, 446, 528, 1052, 1547, 1581
DinI	GGCGCC	1 cut(s)	589
DrdI	GACNNNNNNGTC	1 cut(s)	1163
DriI	GACNNNNNGTC	2 cut(s)	117, 225
DseDI	GACNNNNNNGTC	1 cut(s)	1163
EaeI	YGGCCR	3 cut(s)	534, 703, 723
Eam1104I	CTCTTC	2 cut(s)	598, 1419
Eam1105I	GACNNNNNGTC	2 cut(s)	117, 225
EarI	CTCTTC	2 cut(s)	598, 1419
EciI	GGCGGA	8 cut(s)	79, 128, 175, 236, 291, 313, 335, 357
Ecl136II	GAGCTC	1 cut(s)	1546
Eco130I	CCWWGG	3 cut(s)	1273, 1374, 1447
Eco24I	GRGCYC	2 cut(s)	1071, 1548
Eco47I	GGWCC	2 cut(s)	810, 933
Eco53kI	GAGCTC	1 cut(s)	1546
Eco57I	CTGAAG	2 cut(s)	704, 1046
Eco88I	CYCGRG	2 cut(s)	919, 1507
Eco91I	GGTNACC	1 cut(s)	1451
EcoICRI	GAGCTC	1 cut(s)	1546
EcoO109I	RGGNCCY	1 cut(s)	810
EcoO65I	GGTNACC	1 cut(s)	1451
EcoRII	CCWGG	1 cut(s)	1398
EcoT14I	CCWWGG	3 cut(s)	1273, 1374, 1447
EcoT22I	ATGCAT	1 cut(s)	508
EcoT38I	GRGCYC	2 cut(s)	1071, 1548
EgeI	GGCGCC	1 cut(s)	589
EheI	GGCGCC	1 cut(s)	589
ErhI	CCWWGG	3 cut(s)	1273, 1374, 1447
Esp3I	CGTCTC	4 cut(s)	81, 125, 177, 233
FaeI	CATG	3 cut(s)	1284, 1378, 1432
FalI	AAGNNNNNCTT	2 cut(s)	1151, 1183
FaqI	GGGAC	1 cut(s)	919
FatI	CATG	3 cut(s)	1280, 1374, 1428
FblI	GTMKAC	1 cut(s)	458
FokI	GGATG	4 cut(s)	73, 169, 493, 1453
FriOI	GRGCYC	2 cut(s)	1071, 1548
GlaI	GCGC	3 cut(s)	589, 916, 956
GsaI	CCCAGC	1 cut(s)	546
GsuI	CTGGAG	3 cut(s)	262, 586, 1086
HaeII	RGCGCY	2 cut(s)	591, 918
HaeIII	GGCC	8 cut(s)	536, 705, 725, 742, 787, 840, 1015, 1353
HgaI	GACGC	3 cut(s)	469, 527, 1273
HhaI	GCGC	3 cut(s)	590, 917, 957
Hin1I	GRCGYC	3 cut(s)	455, 588, 1443
Hin1II	CATG	3 cut(s)	1284, 1378, 1432
Hin6I	GCGC	3 cut(s)	588, 915, 955
HinP1I	GCGC	3 cut(s)	588, 915, 955
HincII	GTYRAC	2 cut(s)	459, 1300
HindII	GTYRAC	2 cut(s)	459, 1300
HphI	GGTGA	6 cut(s)	680, 724, 1259, 1308, 1388, 1448
Hpy166II	GTNNAC	4 cut(s)	459, 671, 1032, 1300
Hpy8I	GTNNAC	4 cut(s)	459, 671, 1032, 1300
Hpy99I	CGWCG	6 cut(s)	275, 457, 460, 463, 521, 1289
HpyAV	CCTTC	7 cut(s)	460, 703, 871, 1070, 1330, 1469, 1569
HpyCH4III	ACNGT	5 cut(s)	620, 805, 1140, 1436, 1523
HpyCH4IV	ACGT	5 cut(s)	455, 650, 1164, 1443, 1533
HpyCH4V	TGCA	4 cut(s)	506, 606, 1432, 1466
HpyF10VI	GCNNNNNNNGC	6 cut(s)	533, 629, 952, 961, 1012, 1577
HpyF3I	CTNAG	8 cut(s)	328, 416, 438, 446, 528, 1052, 1547, 1581
HpySE526I	ACGT	5 cut(s)	455, 650, 1164, 1443, 1533
Hsp92I	GRCGYC	3 cut(s)	455, 588, 1443
Hsp92II	CATG	3 cut(s)	1284, 1378, 1432
HspAI	GCGC	3 cut(s)	588, 915, 955
KasI	GGCGCC	1 cut(s)	587
Kpn2I	TCCGGA	1 cut(s)	1562
KroI	GCCGGC	1 cut(s)	725
KroNI	GCCGGC	1 cut(s)	727
LmnI	GCTCC	5 cut(s)	395, 417, 539, 628, 1565
Lsp1109I	GCAGC	4 cut(s)	618, 621, 995, 1555
LweI	GCATC	2 cut(s)	515, 1475
MaeII	ACGT	5 cut(s)	455, 650, 1164, 1443, 1533
MaeIII	GTNAC	4 cut(s)	1085, 1451, 1490, 1514
MflI	RGATCY	3 cut(s)	441, 883, 1119
MhlI	GDGCHC	3 cut(s)	625, 1071, 1548
MluCI	AATT	4 cut(s)	719, 748, 771, 868
Mly113I	GGCGCC	1 cut(s)	588
MlyI	GAGTC	6 cut(s)	63, 106, 202, 214, 269, 1027
MmeI	TCCRAC	1 cut(s)	459
Mph1103I	ATGCAT	1 cut(s)	508
MroI	TCCGGA	1 cut(s)	1562
MroNI	GCCGGC	1 cut(s)	725
MroXI	GAANNNNTTC	2 cut(s)	1166, 1413
MslI	CAYNNNNRTG	1 cut(s)	649
MspR9I	CCNGG	4 cut(s)	598, 821, 988, 1400
MvaI	CCWGG	1 cut(s)	1400
MvnI	CGCG	1 cut(s)	955
MwoI	GCNNNNNNNGC	6 cut(s)	533, 629, 952, 961, 1012, 1577
NaeI	GCCGGC	1 cut(s)	727
NarI	GGCGCC	1 cut(s)	588
NciI	CCSGG	3 cut(s)	598, 821, 988
NcoI	CCATGG	1 cut(s)	1374
NgoMIV	GCCGGC	1 cut(s)	725
NlaIII	CATG	3 cut(s)	1284, 1378, 1432
NlaIV	GGNNCC	2 cut(s)	589, 935
NmeAIII	GCCGAG	1 cut(s)	561
NmuCI	GTSAC	1 cut(s)	1085
NsiI	ATGCAT	1 cut(s)	508
OliI	CACNNNNGTG	1 cut(s)	649
PaeR7I	CTCGAG	1 cut(s)	919
PaqCI	CACCTGC	1 cut(s)	853
PcsI	WCGNNNNNNNCGW	1 cut(s)	1440
PdiI	GCCGGC	1 cut(s)	727
PdmI	GAANNNNTTC	2 cut(s)	1166, 1413
PfeI	GAWTC	5 cut(s)	640, 878, 924, 1056, 1111
PfoI	TCCNGGA	1 cut(s)	596
PinAI	ACCGGT	1 cut(s)	1026
PleI	GAGTC	6 cut(s)	62, 106, 202, 214, 269, 1027
PluTI	GGCGCC	1 cut(s)	591
PpsI	GAGTC	6 cut(s)	62, 106, 202, 214, 269, 1027
PpuMI	RGGWCCY	1 cut(s)	810
Psp124BI	GAGCTC	1 cut(s)	1548
Psp5II	RGGWCCY	1 cut(s)	810
Psp6I	CCWGG	1 cut(s)	1398
PspEI	GGTNACC	1 cut(s)	1451
PspFI	CCCAGC	1 cut(s)	542
PspGI	CCWGG	1 cut(s)	1398
PspN4I	GGNNCC	2 cut(s)	589, 935
PspPI	GGNCC	6 cut(s)	741, 785, 810, 839, 933, 1352
PspPPI	RGGWCCY	1 cut(s)	810
PsuI	RGATCY	3 cut(s)	441, 883, 1119
RsaI	GTAC	2 cut(s)	1094, 1339
RsaNI	GTAC	2 cut(s)	1093, 1338
RseI	CAYNNNNRTG	1 cut(s)	649
SacI	GAGCTC	1 cut(s)	1548
SalI	GTCGAC	1 cut(s)	457
Sau96I	GGNCC	6 cut(s)	741, 785, 810, 839, 933, 1352
ScaI	AGTACT	1 cut(s)	1339
SchI	GAGTC	6 cut(s)	63, 106, 202, 214, 269, 1027
ScrFI	CCNGG	4 cut(s)	598, 821, 988, 1400
SduI	GDGCHC	3 cut(s)	625, 1071, 1548
SfaNI	GCATC	2 cut(s)	515, 1475
SfcI	CTRYAG	1 cut(s)	801
SfoI	GGCGCC	1 cut(s)	589
Sfr274I	CTCGAG	1 cut(s)	919
SgrDI	CGTCGACG	1 cut(s)	457
SinI	GGWCC	2 cut(s)	810, 933
SlaI	CTCGAG	1 cut(s)	919
SmiMI	CAYNNNNRTG	1 cut(s)	649
SmlI	CTYRAG	3 cut(s)	919, 1187, 1541
SmoI	CTYRAG	3 cut(s)	919, 1187, 1541
Sse9I	AATT	4 cut(s)	719, 748, 771, 868
SspDI	GGCGCC	1 cut(s)	587
SstI	GAGCTC	1 cut(s)	1548
StyD4I	CCNGG	4 cut(s)	596, 819, 986, 1398
StyI	CCWWGG	3 cut(s)	1273, 1374, 1447
TaaI	ACNGT	5 cut(s)	620, 805, 1140, 1436, 1523
TaiI	ACGT	5 cut(s)	458, 653, 1167, 1446, 1536
TaqII	GACCGA	1 cut(s)	921
TasI	AATT	4 cut(s)	719, 748, 771, 868
TatI	WGTACW	1 cut(s)	1337
TauI	GCSGC	6 cut(s)	144, 252, 307, 351, 373, 588
TfiI	GAWTC	5 cut(s)	640, 878, 924, 1056, 1111
TscAI	CASTG	4 cut(s)	687, 810, 1468, 1528
TseFI	GTSAC	1 cut(s)	1085
TseI	GCWGC	4 cut(s)	606, 609, 983, 1568
Tsp45I	GTSAC	1 cut(s)	1085
TspDTI	ATGAA	1 cut(s)	1118
TspGWI	ACGGA	3 cut(s)	107, 215, 854
TspRI	CASTG	4 cut(s)	687, 810, 1468, 1528
VpaK11BI	GGWCC	2 cut(s)	810, 933
XapI	RAATTY	2 cut(s)	748, 771
XhoI	CTCGAG	1 cut(s)	919
XmiI	GTMKAC	1 cut(s)	458
XmnI	GAANNNNTTC	2 cut(s)	1166, 1413
ZraI	GACGTC	2 cut(s)	456, 1444
ZrmI	AGTACT	1 cut(s)	1339
Zsp2I	ATGCAT	1 cut(s)	508

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.