Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005777.1

Orthogroup ID

OG0000180

Physical Location & Seq

Genomic Coordinates Forward (+)

2523 .. 5402

Gene Structure 2880 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005777.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

atgcaaggaggatttgaggatgatcaaggggaggaggatatcacgaaaatgggaaggatcggccgagggaacgccggaaaatcggttctccggccgggtcaccgatcggcggctggaatgccttcgatccagctttcggggcagtggcggggcaagaggaccacgggggtcgactggattcggcgagacgacctcggggagggccgggtcgtcaccaaaggacgccgggaagtggccgttccggccgggcccgaaccaatttgggctgaaaactcggcccaccaaccttcagctcgactcggcttagccgtactgtttggctacttccggctcggctacagtatgaagctttacatactaaatccggcccatgaatgtcaccaaaactatttcaaaaattcggcccatgggcctccacccatagctacagtgagggcattgatccgggacaagcccatgtacggcccacctgccacggcttatcctttccgtgatttacggaaatcaaatttgctttcagctaagtttgtctgccacagcgcctcgagattcgttcgaatcctcaaggagctttattattacaaggaacttaggtacccaactccagagcagattcaagagatctgccttcatctgaaacagtatgggcagattgaggacaagaatgtcttcttttggttccagaacctcaaagctcgagagaagcagatgatgaggttaattcgggacgttcgggttggtggatctctcgatctaaattttggatccactagttctattgatgaaggtgggttcattgatctaaactttggttcggttggttctactggtgatgatggatccgtcgatttaaattttgggtcatgggtcggctatagtgttggcccatattcctcctcacccttcaaccctaatactagcactacctcctttgacacagaagaaggacagactttcatggaacaacgaggaggagatcaccaggaggttgaaactcttcctctgttccccgtgcactgtgaggacatccttggtaacccgaagactactttagaggaaggtagcgcatatggttactattctgatggctcgggcggttacaacggtgactctcacgtttctcttgagcttagcctcaacccttccggagctgctaacttggcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

388

Amino Acids

42.91

Weight (kDa)

6.23

Isoelectric Point (pI)

37.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000180)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr0c19g0499991 RchiOBHm_Chr0c19g0500021 RchiOBHm_Chr0c19g0500131 RchiOBHm_Chr0c31g0501321 RchiOBHm_Chr0c31g0501441 RchiOBHm_Chr1g0365611 RchiOBHm_Chr1g0366061 RchiOBHm_Chr1g0367951 RchiOBHm_Chr1g0369471 RchiOBHm_Chr1g0377271 RchiOBHm_Chr1g0379021 RchiOBHm_Chr1g0379461 RchiOBHm_Chr1g0381431 RchiOBHm_Chr1g0383551 RchiOBHm_Chr1g0383621 RchiOBHm_Chr2g0120951 RchiOBHm_Chr2g0121321 RchiOBHm_Chr2g0121381 RchiOBHm_Chr2g0121801 RchiOBHm_Chr2g0121861 RchiOBHm_Chr2g0122211 RchiOBHm_Chr2g0122471 RchiOBHm_Chr2g0122511 RchiOBHm_Chr2g0122751 RchiOBHm_Chr2g0123361 RchiOBHm_Chr2g0124071 RchiOBHm_Chr2g0124341 RchiOBHm_Chr2g0124361 RchiOBHm_Chr2g0124511 RchiOBHm_Chr2g0124641 RchiOBHm_Chr2g0125051 RchiOBHm_Chr2g0125111 RchiOBHm_Chr2g0125641 RchiOBHm_Chr2g0125871 RchiOBHm_Chr2g0125901 RchiOBHm_Chr2g0126011 RchiOBHm_Chr2g0126291 RchiOBHm_Chr2g0126341 RchiOBHm_Chr2g0126611 RchiOBHm_Chr2g0126671 RchiOBHm_Chr2g0126701 RchiOBHm_Chr2g0127021 RchiOBHm_Chr2g0127071 RchiOBHm_Chr2g0127361 RchiOBHm_Chr2g0127691 RchiOBHm_Chr2g0128041 RchiOBHm_Chr2g0128051 RchiOBHm_Chr2g0128061 RchiOBHm_Chr2g0128141 RchiOBHm_Chr2g0128171 RchiOBHm_Chr2g0128181 RchiOBHm_Chr2g0128551 RchiOBHm_Chr2g0128991 RchiOBHm_Chr2g0130061 RchiOBHm_Chr2g0130391 RchiOBHm_Chr2g0130631 RchiOBHm_Chr2g0130921 RchiOBHm_Chr2g0132731 RchiOBHm_Chr2g0133461 RchiOBHm_Chr2g0133921 RchiOBHm_Chr2g0134031 RchiOBHm_Chr2g0134281 RchiOBHm_Chr2g0134351 RchiOBHm_Chr2g0135501 RchiOBHm_Chr2g0135821 RchiOBHm_Chr2g0135931 RchiOBHm_Chr2g0137501 RchiOBHm_Chr2g0139141 RchiOBHm_Chr2g0139511 RchiOBHm_Chr2g0142411 RchiOBHm_Chr2g0143261 RchiOBHm_Chr2g0144171 RchiOBHm_Chr2g0144741 RchiOBHm_Chr2g0144841 RchiOBHm_Chr2g0145021 RchiOBHm_Chr2g0145831 RchiOBHm_Chr2g0145881 RchiOBHm_Chr2g0146081 RchiOBHm_Chr2g0146141 RchiOBHm_Chr2g0146671 RchiOBHm_Chr2g0149001 RchiOBHm_Chr2g0151811 RchiOBHm_Chr2g0151821 RchiOBHm_Chr2g0151831 RchiOBHm_Chr2g0152051 RchiOBHm_Chr2g0154791 RchiOBHm_Chr2g0155541 RchiOBHm_Chr2g0160791 RchiOBHm_Chr2g0161631 RchiOBHm_Chr2g0162151 RchiOBHm_Chr2g0162751 RchiOBHm_Chr2g0166561 RchiOBHm_Chr2g0166751 RchiOBHm_Chr2g0168891 RchiOBHm_Chr2g0170211 RchiOBHm_Chr2g0170781 RchiOBHm_Chr2g0172831 RchiOBHm_Chr2g0174791 RchiOBHm_Chr3g0448081 RchiOBHm_Chr3g0449761 RchiOBHm_Chr3g0453291 RchiOBHm_Chr3g0456271 RchiOBHm_Chr3g0456461 RchiOBHm_Chr3g0458351 RchiOBHm_Chr3g0461411 RchiOBHm_Chr3g0461511 RchiOBHm_Chr3g0463871 RchiOBHm_Chr3g0467841 RchiOBHm_Chr3g0470081 RchiOBHm_Chr3g0470571 RchiOBHm_Chr7g0187061 RchiOBHm_Chr7g0187461 RchiOBHm_Chr7g0187681 RchiOBHm_Chr7g0189901 RchiOBHm_Chr7g0190271 RchiOBHm_Chr7g0193451 RchiOBHm_Chr7g0194081 RchiOBHm_Chr7g0195771 RchiOBHm_Chr7g0196301 RchiOBHm_Chr7g0196911
rosa_multiflora	Rmu_sc0000236.1_g000047 Rmu_sc0000284.1_g000007 Rmu_sc0000288.1_g000006 Rmu_sc0000507.1_g000017 Rmu_sc0000580.1_g000015 Rmu_sc0000663.1_g000011 Rmu_sc0000675.1_g000024 Rmu_sc0000693.1_g000072 Rmu_sc0000779.1_g000005 Rmu_sc0000851.1_g000015 Rmu_sc0000962.1_g000001 Rmu_sc0001493.1_g000055 Rmu_sc0001669.1_g000025 Rmu_sc0001891.1_g000051 Rmu_sc0001926.1_g000007 Rmu_sc0002082.1_g000025 Rmu_sc0002141.1_g000001 Rmu_sc0002141.1_g000004 Rmu_sc0002414.1_g000012 Rmu_sc0002557.1_g000022 Rmu_sc0002709.1_g000038 Rmu_sc0002897.1_g000004 Rmu_sc0002934.1_g000055 Rmu_sc0003692.1_g000017 Rmu_sc0004283.1_g000068 Rmu_sc0004598.1_g000010 Rmu_sc0004614.1_g000004 Rmu_sc0004805.1_g000006 Rmu_sc0005142.1_g000041 Rmu_sc0005777.1_g000001 Rmu_sc0006420.1_g000019 Rmu_sc0006803.1_g000016 Rmu_sc0007034.1_g000015 Rmu_sc0008079.1_g000017 Rmu_sc0008148.1_g000040 Rmu_sc0008608.1_g000007 Rmu_sc0008675.1_g000001 Rmu_sc0009663.1_g000001 Rmu_sc0010188.1_g000003 Rmu_sc0010739.1_g000005 Rmu_sc0016265.1_g000001 Rmu_sc0031757.1_g000001 Rmu_ssc0000087.1_g000024 Rmu_ssc0000438.1_g000029
rosa_roxburghii	Rroxscaffold_1G00003350
rosa_rugosa	Rorug03G0248400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	478
AasI	GACNNNNNNGTC	1 cut(s)	665
Acc36I	ACCTGC	1 cut(s)	478
Acc65I	GGTACC	1 cut(s)	594
AccB1I	GGYRCC	1 cut(s)	594
AccI	GTMKAC	1 cut(s)	171
AccIII	TCCGGA	1 cut(s)	1145
AciI	CCGC	3 cut(s)	110, 148, 1095
AclWI	GGATC	8 cut(s)	65, 121, 436, 751, 759, 772, 834, 847
AcoI	YGGCCR	4 cut(s)	61, 92, 234, 243
AcsI	RAATTY	4 cut(s)	397, 508, 757, 853
AcuI	CTGAAG	1 cut(s)	273
AcyI	GRCGYC	1 cut(s)	223
AfaI	GTAC	3 cut(s)	312, 461, 596
AfiI	CCNNNNNNNGG	5 cut(s)	109, 136, 199, 232, 461
AgsI	TTSAA	4 cut(s)	394, 617, 907, 992
AhlI	ACTAGT	1 cut(s)	770
AjnI	CCWGG	1 cut(s)	981
AloI	GAACNNNNNNTCC	2 cut(s)	69, 101
AluBI	AGCT	9 cut(s)	133, 293, 349, 425, 521, 571, 695, 1129, 1151
AluI	AGCT	9 cut(s)	133, 293, 349, 425, 521, 571, 695, 1129, 1151
Alw21I	GWGCWC	1 cut(s)	1017
Alw26I	GTCTC	1 cut(s)	180
Alw44I	GTGCAC	1 cut(s)	1013
AlwI	GGATC	8 cut(s)	65, 121, 436, 751, 759, 772, 834, 847
Ama87I	CYCGRG	4 cut(s)	194, 544, 696, 1090
Aor13HI	TCCGGA	1 cut(s)	1145
ApaI	GGGCCC	1 cut(s)	252
ApaLI	GTGCAC	1 cut(s)	1013
ApeKI	GCWGC	1 cut(s)	1151
ApoI	RAATTY	4 cut(s)	397, 508, 757, 853
Asp700I	GAANNNNTTC	3 cut(s)	121, 668, 996
Asp718I	GGTACC	1 cut(s)	594
AspLEI	GCGC	2 cut(s)	542, 1067
AsuC2I	CCSGG	5 cut(s)	96, 206, 227, 247, 446
AsuHPI	GGTGA	7 cut(s)	92, 205, 371, 842, 891, 971, 1118
AsuII	TTCGAA	1 cut(s)	556
AvaI	CYCGRG	4 cut(s)	194, 544, 696, 1090
AvaII	GGWCC	1 cut(s)	159
BaeGI	GKGCMC	2 cut(s)	252, 1017
BaeI	ACNNNNGTAYC	2 cut(s)	578, 611
BamHI	GGATCC	2 cut(s)	764, 839
BanI	GGYRCC	1 cut(s)	594
BanII	GRGCYC	1 cut(s)	252
BbsI	GAAGAC	2 cut(s)	661, 1049
Bbv12I	GWGCWC	1 cut(s)	1017
BbvI	GCAGC	1 cut(s)	1138
BccI	CCATC	2 cut(s)	830, 1079
BceAI	ACGGC	4 cut(s)	221, 293, 478, 492
BciT130I	CCWGG	1 cut(s)	983
BclI	TGATCA	1 cut(s)	22
BcnI	CCSGG	5 cut(s)	96, 206, 227, 247, 446
BcoDI	GTCTC	1 cut(s)	180
BcuI	ACTAGT	1 cut(s)	770
BfaI	CTAG	2 cut(s)	771, 918
BfmI	CTRYAG	3 cut(s)	337, 426, 874
BfoI	RGCGCY	1 cut(s)	543
BfuAI	ACCTGC	1 cut(s)	478
BglI	GCCNNNNNGGC	1 cut(s)	242
BglII	AGATCT	1 cut(s)	621
BisI	GCNGC	2 cut(s)	111, 1152
BlpI	GCTNAGC	2 cut(s)	304, 1130
BlsI	GCNGC	2 cut(s)	112, 1153
Bme1390I	CCNGG	6 cut(s)	96, 206, 227, 247, 446, 983
Bme18I	GGWCC	1 cut(s)	159
BmeT110I	CYCGRG	4 cut(s)	194, 544, 696, 1090
BmiI	GGNNCC	5 cut(s)	250, 596, 680, 766, 841
BmrFI	CCNGG	6 cut(s)	96, 206, 227, 247, 446, 983
BpiI	GAAGAC	2 cut(s)	661, 1049
BplI	GAGNNNNNCTC	2 cut(s)	177, 209
BpmI	CTGGAG	1 cut(s)	588
Bpu1102I	GCTNAGC	2 cut(s)	304, 1130
Bpu14I	TTCGAA	1 cut(s)	556
BpuEI	CTTGAG	2 cut(s)	548, 1145
BpuMI	CCSGG	5 cut(s)	96, 206, 227, 247, 446
BsaHI	GRCGYC	1 cut(s)	223
BsaJI	CCNNGG	6 cut(s)	64, 162, 193, 406, 474, 1030
BsaWI	WCCGGW	1 cut(s)	1145
Bsc4I	CCNNNNNNNGG	5 cut(s)	109, 136, 199, 232, 461
Bse1I	ACTGG	2 cut(s)	179, 832
BseAI	TCCGGA	1 cut(s)	1145
BseBI	CCWGG	1 cut(s)	983
BseDI	CCNNGG	6 cut(s)	64, 162, 193, 406, 474, 1030
BseGI	GGATG	2 cut(s)	25, 1026
BseLI	CCNNNNNNNGG	5 cut(s)	109, 136, 199, 232, 461
BseNI	ACTGG	2 cut(s)	179, 832
BseRI	GAGGAG	4 cut(s)	47, 886, 984, 987
BseSI	GKGCMC	2 cut(s)	252, 1017
BseX3I	CGGCCG	3 cut(s)	61, 92, 243
BseXI	GCAGC	1 cut(s)	1138
Bsh1285I	CGRYCG	4 cut(s)	64, 95, 107, 246
BshNI	GGYRCC	1 cut(s)	594
BsiEI	CGRYCG	4 cut(s)	64, 95, 107, 246
BsiHKAI	GWGCWC	1 cut(s)	1017
BsiHKCI	CYCGRG	4 cut(s)	194, 544, 696, 1090
BslFI	GGGAC	2 cut(s)	461, 740
BslI	CCNNNNNNNGG	5 cut(s)	109, 136, 199, 232, 461
BsmAI	GTCTC	1 cut(s)	180
BsmBI	CGTCTC	1 cut(s)	180
BsmFI	GGGAC	2 cut(s)	461, 740
BsmI	GAATGC	1 cut(s)	123
BsoBI	CYCGRG	4 cut(s)	194, 544, 696, 1090
Bsp119I	TTCGAA	1 cut(s)	556
Bsp120I	GGGCCC	1 cut(s)	248
Bsp1286I	GDGCHC	2 cut(s)	252, 1017
Bsp13I	TCCGGA	1 cut(s)	1145
Bsp1720I	GCTNAGC	2 cut(s)	304, 1130
Bsp19I	CCATGG	1 cut(s)	406
BspACI	CCGC	3 cut(s)	110, 148, 1095
BspEI	TCCGGA	1 cut(s)	1145
BspLI	GGNNCC	5 cut(s)	250, 596, 680, 766, 841
BspMI	ACCTGC	1 cut(s)	478
BspPI	GGATC	8 cut(s)	65, 121, 436, 751, 759, 772, 834, 847
BspT104I	TTCGAA	1 cut(s)	556
BspT107I	GGYRCC	1 cut(s)	594
BsrI	ACTGG	2 cut(s)	179, 832
BssECI	CCNNGG	6 cut(s)	64, 162, 193, 406, 474, 1030
BssNI	GRCGYC	1 cut(s)	223
BssT1I	CCWWGG	2 cut(s)	406, 1030
Bst2UI	CCWGG	1 cut(s)	983
Bst4CI	ACNGT	6 cut(s)	315, 341, 430, 642, 1019, 1106
Bst6I	CTCTTC	1 cut(s)	1002
BstACI	GRCGYC	1 cut(s)	223
BstBI	TTCGAA	1 cut(s)	556
BstDEI	CTNAG	5 cut(s)	304, 522, 590, 1130, 1164
BstDSI	CCRYGG	3 cut(s)	162, 406, 474
BstEII	GGTNACC	2 cut(s)	98, 1034
BstENI	CCTNNNNNAGG	1 cut(s)	197
BstF5I	GGATG	2 cut(s)	25, 1026
BstH2I	RGCGCY	1 cut(s)	543
BstHHI	GCGC	2 cut(s)	542, 1067
BstMAI	GTCTC	1 cut(s)	180
BstMCI	CGRYCG	4 cut(s)	64, 95, 107, 246
BstMWI	GCNNNNNNNGC	3 cut(s)	139, 242, 1160
BstNI	CCWGG	1 cut(s)	983
BstPI	GGTNACC	2 cut(s)	98, 1034
BstSCI	CCNGG	6 cut(s)	94, 204, 225, 245, 444, 981
BstSFI	CTRYAG	3 cut(s)	337, 426, 874
BstSLI	GKGCMC	2 cut(s)	252, 1017
BstV1I	GCAGC	1 cut(s)	1138
BstV2I	GAAGAC	2 cut(s)	661, 1049
BstX2I	RGATCY	4 cut(s)	621, 743, 764, 839
BstYI	RGATCY	4 cut(s)	621, 743, 764, 839
BstZI	CGGCCG	3 cut(s)	61, 92, 243
BtgI	CCRYGG	3 cut(s)	162, 406, 474
BtsCI	GGATG	2 cut(s)	25, 1026
BtsI	GCAGTG	1 cut(s)	149
BtsIMutI	CAGTG	3 cut(s)	149, 435, 1015
BveI	ACCTGC	1 cut(s)	478
CfoI	GCGC	2 cut(s)	542, 1067
CseI	GACGC	1 cut(s)	231
Csp6I	GTAC	3 cut(s)	311, 460, 595
CviAII	CATG	5 cut(s)	371, 407, 457, 864, 958
CviQI	GTAC	3 cut(s)	311, 460, 595
DdeI	CTNAG	5 cut(s)	304, 522, 590, 1130, 1164
DraI	TTTAAA	1 cut(s)	852
DrdI	GACNNNNNNGTC	1 cut(s)	665
DseDI	GACNNNNNNGTC	1 cut(s)	665
EaeI	YGGCCR	4 cut(s)	61, 92, 234, 243
EagI	CGGCCG	3 cut(s)	61, 92, 243
Eam1104I	CTCTTC	1 cut(s)	1002
EarI	CTCTTC	1 cut(s)	1002
EclXI	CGGCCG	3 cut(s)	61, 92, 243
Eco130I	CCWWGG	2 cut(s)	406, 1030
Eco24I	GRGCYC	1 cut(s)	252
Eco32I	GATATC	1 cut(s)	40
Eco47I	GGWCC	1 cut(s)	159
Eco52I	CGGCCG	3 cut(s)	61, 92, 243
Eco57I	CTGAAG	1 cut(s)	273
Eco88I	CYCGRG	4 cut(s)	194, 544, 696, 1090
Eco91I	GGTNACC	2 cut(s)	98, 1034
EcoNI	CCTNNNNNAGG	1 cut(s)	197
EcoO65I	GGTNACC	2 cut(s)	98, 1034
EcoRII	CCWGG	1 cut(s)	981
EcoRV	GATATC	1 cut(s)	40
EcoT14I	CCWWGG	2 cut(s)	406, 1030
EcoT38I	GRGCYC	1 cut(s)	252
ErhI	CCWWGG	2 cut(s)	406, 1030
Esp3I	CGTCTC	1 cut(s)	180
FaeI	CATG	5 cut(s)	374, 410, 460, 867, 961
FalI	AAGNNNNNCTT	2 cut(s)	653, 685
FaqI	GGGAC	2 cut(s)	461, 740
FatI	CATG	5 cut(s)	370, 406, 456, 863, 957
FauI	CCCGC	1 cut(s)	141
FauNDI	CATATG	1 cut(s)	1069
FbaI	TGATCA	1 cut(s)	22
FblI	GTMKAC	1 cut(s)	171
Fnu4HI	GCNGC	2 cut(s)	111, 1152
FokI	GGATG	2 cut(s)	32, 1013
FriOI	GRGCYC	1 cut(s)	252
Fsp4HI	GCNGC	2 cut(s)	111, 1152
FspBI	CTAG	2 cut(s)	771, 918
GlaI	GCGC	2 cut(s)	541, 1066
GluI	GCNGC	2 cut(s)	111, 1152
GsuI	CTGGAG	1 cut(s)	588
HaeII	RGCGCY	1 cut(s)	543
HgaI	GACGC	1 cut(s)	231
HhaI	GCGC	2 cut(s)	542, 1067
Hin1I	GRCGYC	1 cut(s)	223
Hin1II	CATG	5 cut(s)	374, 410, 460, 867, 961
Hin6I	GCGC	2 cut(s)	540, 1065
HinP1I	GCGC	2 cut(s)	540, 1065
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HindIII	AAGCTT	1 cut(s)	347
HinfI	GANTC	6 cut(s)	178, 297, 549, 558, 613, 1109
HphI	GGTGA	7 cut(s)	92, 205, 371, 842, 891, 971, 1118
Hpy166II	GTNNAC	2 cut(s)	172, 1015
Hpy188I	TCNGA	2 cut(s)	636, 1084
Hpy8I	GTNNAC	2 cut(s)	172, 1015
Hpy99I	CGWCG	1 cut(s)	848
HpyAV	CCTTC	9 cut(s)	48, 132, 297, 638, 779, 913, 938, 1052, 1152
HpyCH4III	ACNGT	6 cut(s)	315, 341, 430, 642, 1019, 1106
HpyCH4IV	ACGT	2 cut(s)	729, 1116
HpyCH4V	TGCA	2 cut(s)	4, 1015
HpyF10VI	GCNNNNNNNGC	3 cut(s)	139, 242, 1160
HpyF3I	CTNAG	5 cut(s)	304, 522, 590, 1130, 1164
HpySE526I	ACGT	2 cut(s)	729, 1116
Hsp92I	GRCGYC	1 cut(s)	223
Hsp92II	CATG	5 cut(s)	374, 410, 460, 867, 961
HspAI	GCGC	2 cut(s)	540, 1065
Kpn2I	TCCGGA	1 cut(s)	1145
KpnI	GGTACC	1 cut(s)	598
Ksp22I	TGATCA	1 cut(s)	22
LmnI	GCTCC	2 cut(s)	568, 1148
Lsp1109I	GCAGC	1 cut(s)	1138
MaeI	CTAG	2 cut(s)	771, 918
MaeII	ACGT	2 cut(s)	729, 1116
MaeIII	GTNAC	7 cut(s)	98, 211, 377, 1034, 1073, 1097, 1106
MboII	GAAGA	4 cut(s)	661, 953, 989, 1054
MflI	RGATCY	4 cut(s)	621, 743, 764, 839
MhlI	GDGCHC	2 cut(s)	252, 1017
MluCI	AATT	6 cut(s)	258, 397, 508, 720, 757, 853
MlyI	GAGTC	2 cut(s)	291, 1103
MroI	TCCGGA	1 cut(s)	1145
MroXI	GAANNNNTTC	3 cut(s)	121, 668, 996
MseI	TTAA	2 cut(s)	719, 851
MslI	CAYNNNNRTG	1 cut(s)	47
MspR9I	CCNGG	6 cut(s)	96, 206, 227, 247, 446, 983
Mva1269I	GAATGC	1 cut(s)	123
MvaI	CCWGG	1 cut(s)	983
MwoI	GCNNNNNNNGC	3 cut(s)	139, 242, 1160
NciI	CCSGG	5 cut(s)	96, 206, 227, 247, 446
NcoI	CCATGG	1 cut(s)	406
NdeI	CATATG	1 cut(s)	1069
NlaIII	CATG	5 cut(s)	374, 410, 460, 867, 961
NlaIV	GGNNCC	5 cut(s)	250, 596, 680, 766, 841
NmeAIII	GCCGAG	4 cut(s)	89, 254, 279, 312
NmuCI	GTSAC	4 cut(s)	98, 211, 377, 1106
NspV	TTCGAA	1 cut(s)	556
PaeR7I	CTCGAG	2 cut(s)	544, 696
PaqCI	CACCTGC	1 cut(s)	478
PcsI	WCGNNNNNNNCGW	1 cut(s)	306
PctI	GAATGC	1 cut(s)	123
PdmI	GAANNNNTTC	3 cut(s)	121, 668, 996
PfeI	GAWTC	4 cut(s)	178, 549, 558, 613
PfoI	TCCNGGA	1 cut(s)	444
PkrI	GCNGC	2 cut(s)	112, 1153
Ple19I	CGATCG	1 cut(s)	107
PleI	GAGTC	2 cut(s)	291, 1103
PpsI	GAGTC	2 cut(s)	291, 1103
Psp6I	CCWGG	1 cut(s)	981
PspEI	GGTNACC	2 cut(s)	98, 1034
PspGI	CCWGG	1 cut(s)	981
PspN4I	GGNNCC	5 cut(s)	250, 596, 680, 766, 841
PspOMI	GGGCCC	1 cut(s)	248
PsuI	RGATCY	4 cut(s)	621, 743, 764, 839
PvuI	CGATCG	1 cut(s)	107
RsaI	GTAC	3 cut(s)	312, 461, 596
RsaNI	GTAC	3 cut(s)	311, 460, 595
RseI	CAYNNNNRTG	1 cut(s)	47
SalI	GTCGAC	1 cut(s)	170
SaqAI	TTAA	2 cut(s)	719, 851
SatI	GCNGC	2 cut(s)	111, 1152
SchI	GAGTC	2 cut(s)	291, 1103
ScrFI	CCNGG	6 cut(s)	96, 206, 227, 247, 446, 983
SduI	GDGCHC	2 cut(s)	252, 1017
SfcI	CTRYAG	3 cut(s)	337, 426, 874
SfiI	GGCCNNNNNGGCC	1 cut(s)	242
Sfr274I	CTCGAG	2 cut(s)	544, 696
SfuI	TTCGAA	1 cut(s)	556
SinI	GGWCC	1 cut(s)	159
SlaI	CTCGAG	2 cut(s)	544, 696
SmiI	ATTTAAAT	1 cut(s)	852
SmiMI	CAYNNNNRTG	1 cut(s)	47
SmlI	CTYRAG	4 cut(s)	544, 563, 696, 1124
SmoI	CTYRAG	4 cut(s)	544, 563, 696, 1124
SpeI	ACTAGT	1 cut(s)	770
Sse9I	AATT	6 cut(s)	258, 397, 508, 720, 757, 853
SsiI	CCGC	3 cut(s)	110, 148, 1095
SspMI	CTAG	2 cut(s)	771, 918
StyD4I	CCNGG	6 cut(s)	94, 204, 225, 245, 444, 981
StyI	CCWWGG	2 cut(s)	406, 1030
SwaI	ATTTAAAT	1 cut(s)	852
TaaI	ACNGT	6 cut(s)	315, 341, 430, 642, 1019, 1106
TaiI	ACGT	2 cut(s)	732, 1119
TaqI	TCGA	8 cut(s)	125, 171, 295, 545, 556, 697, 750, 846
TasI	AATT	6 cut(s)	258, 397, 508, 720, 757, 853
TauI	GCSGC	1 cut(s)	113
TfiI	GAWTC	4 cut(s)	178, 549, 558, 613
Tru1I	TTAA	2 cut(s)	719, 851
Tru9I	TTAA	2 cut(s)	719, 851
TscAI	CASTG	3 cut(s)	149, 435, 1022
TseFI	GTSAC	4 cut(s)	98, 211, 377, 1106
TseI	GCWGC	1 cut(s)	1151
Tsp45I	GTSAC	4 cut(s)	98, 211, 377, 1106
TspDTI	ATGAA	6 cut(s)	359, 387, 620, 784, 798, 946
TspGWI	ACGGA	3 cut(s)	479, 514, 832
TspRI	CASTG	3 cut(s)	149, 435, 1022
VneI	GTGCAC	1 cut(s)	1013
VpaK11BI	GGWCC	1 cut(s)	159
XagI	CCTNNNNNAGG	1 cut(s)	197
XapI	RAATTY	4 cut(s)	397, 508, 757, 853
XhoI	CTCGAG	2 cut(s)	544, 696
XmiI	GTMKAC	1 cut(s)	171
XmnI	GAANNNNTTC	3 cut(s)	121, 668, 996
XspI	CTAG	2 cut(s)	771, 918

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.