Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003692.1

Orthogroup ID

OG0000180

Physical Location & Seq

Genomic Coordinates Reverse (-)

47628 .. 48941

Gene Structure 1314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003692.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

atgaatttcgccaaaactatttcagagattcggcccatcgggcctccacccacagctacagtgaggaccttgatccggggcaagcccaagtacggcccacctgccacggcttatcccttctgtgatttacggaaatcagaatcactttcggctaaagctgtctgccacagcgcctcgagattcgctcggtccccttacgcgctctccacgcgccaacaacttttccgtcctttctttcgaagctcaaatcctttcttcatcaatttcactccttctcctcccgatcttctcttccatcaggaagattcaatctcttctttcattcgaaaaattagatcaccaccacaacttcctcaactcatcaacatggaaccacgaactctgcaactaatggagttacaaacccagcaacaaatggaattacaagcccagcaactaaccgaggagggaggaagcacccaagcagccgggagtagtgccaacacgcctatcaggccgaccagtaaccggtggactcctacaccagctcaactaagaatcctccaggagctttactatgacaaggtgcttaaatacccaactccagagcagattcaagagatctgccttcatctgcaacaatatgggcagatcgaggacaagaacgtcttcttttggttccagaacctcaaggctcgagagaggcagaagttgaaggaatttcagaatgttcgggttggtggatctctcgatctcaatttcggatccacaagttctactgatgatggtaggtccattgatctaaactttggtttcactggttcaactggagatcaccaggaggtcgagactcttcctctgttccccatgcacggtgagaacgtccttggtaacccgaagactacatccgaggaaggtagcgcatatggttactattctggtggctcaggcggttacaacagtggctctcccgtttctcttgagctcagcctcaacccatccggagctgctgacttggcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

333

Amino Acids

37.06

Weight (kDa)

7.71

Isoelectric Point (pI)

59.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000180)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr0c19g0499991 RchiOBHm_Chr0c19g0500021 RchiOBHm_Chr0c19g0500131 RchiOBHm_Chr0c31g0501321 RchiOBHm_Chr0c31g0501441 RchiOBHm_Chr1g0365611 RchiOBHm_Chr1g0366061 RchiOBHm_Chr1g0367951 RchiOBHm_Chr1g0369471 RchiOBHm_Chr1g0377271 RchiOBHm_Chr1g0379021 RchiOBHm_Chr1g0379461 RchiOBHm_Chr1g0381431 RchiOBHm_Chr1g0383551 RchiOBHm_Chr1g0383621 RchiOBHm_Chr2g0120951 RchiOBHm_Chr2g0121321 RchiOBHm_Chr2g0121381 RchiOBHm_Chr2g0121801 RchiOBHm_Chr2g0121861 RchiOBHm_Chr2g0122211 RchiOBHm_Chr2g0122471 RchiOBHm_Chr2g0122511 RchiOBHm_Chr2g0122751 RchiOBHm_Chr2g0123361 RchiOBHm_Chr2g0124071 RchiOBHm_Chr2g0124341 RchiOBHm_Chr2g0124361 RchiOBHm_Chr2g0124511 RchiOBHm_Chr2g0124641 RchiOBHm_Chr2g0125051 RchiOBHm_Chr2g0125111 RchiOBHm_Chr2g0125641 RchiOBHm_Chr2g0125871 RchiOBHm_Chr2g0125901 RchiOBHm_Chr2g0126011 RchiOBHm_Chr2g0126291 RchiOBHm_Chr2g0126341 RchiOBHm_Chr2g0126611 RchiOBHm_Chr2g0126671 RchiOBHm_Chr2g0126701 RchiOBHm_Chr2g0127021 RchiOBHm_Chr2g0127071 RchiOBHm_Chr2g0127361 RchiOBHm_Chr2g0127691 RchiOBHm_Chr2g0128041 RchiOBHm_Chr2g0128051 RchiOBHm_Chr2g0128061 RchiOBHm_Chr2g0128141 RchiOBHm_Chr2g0128171 RchiOBHm_Chr2g0128181 RchiOBHm_Chr2g0128551 RchiOBHm_Chr2g0128991 RchiOBHm_Chr2g0130061 RchiOBHm_Chr2g0130391 RchiOBHm_Chr2g0130631 RchiOBHm_Chr2g0130921 RchiOBHm_Chr2g0132731 RchiOBHm_Chr2g0133461 RchiOBHm_Chr2g0133921 RchiOBHm_Chr2g0134031 RchiOBHm_Chr2g0134281 RchiOBHm_Chr2g0134351 RchiOBHm_Chr2g0135501 RchiOBHm_Chr2g0135821 RchiOBHm_Chr2g0135931 RchiOBHm_Chr2g0137501 RchiOBHm_Chr2g0139141 RchiOBHm_Chr2g0139511 RchiOBHm_Chr2g0142411 RchiOBHm_Chr2g0143261 RchiOBHm_Chr2g0144171 RchiOBHm_Chr2g0144741 RchiOBHm_Chr2g0144841 RchiOBHm_Chr2g0145021 RchiOBHm_Chr2g0145831 RchiOBHm_Chr2g0145881 RchiOBHm_Chr2g0146081 RchiOBHm_Chr2g0146141 RchiOBHm_Chr2g0146671 RchiOBHm_Chr2g0149001 RchiOBHm_Chr2g0151811 RchiOBHm_Chr2g0151821 RchiOBHm_Chr2g0151831 RchiOBHm_Chr2g0152051 RchiOBHm_Chr2g0154791 RchiOBHm_Chr2g0155541 RchiOBHm_Chr2g0160791 RchiOBHm_Chr2g0161631 RchiOBHm_Chr2g0162151 RchiOBHm_Chr2g0162751 RchiOBHm_Chr2g0166561 RchiOBHm_Chr2g0166751 RchiOBHm_Chr2g0168891 RchiOBHm_Chr2g0170211 RchiOBHm_Chr2g0170781 RchiOBHm_Chr2g0172831 RchiOBHm_Chr2g0174791 RchiOBHm_Chr3g0448081 RchiOBHm_Chr3g0449761 RchiOBHm_Chr3g0453291 RchiOBHm_Chr3g0456271 RchiOBHm_Chr3g0456461 RchiOBHm_Chr3g0458351 RchiOBHm_Chr3g0461411 RchiOBHm_Chr3g0461511 RchiOBHm_Chr3g0463871 RchiOBHm_Chr3g0467841 RchiOBHm_Chr3g0470081 RchiOBHm_Chr3g0470571 RchiOBHm_Chr7g0187061 RchiOBHm_Chr7g0187461 RchiOBHm_Chr7g0187681 RchiOBHm_Chr7g0189901 RchiOBHm_Chr7g0190271 RchiOBHm_Chr7g0193451 RchiOBHm_Chr7g0194081 RchiOBHm_Chr7g0195771 RchiOBHm_Chr7g0196301 RchiOBHm_Chr7g0196911
rosa_multiflora	Rmu_sc0000236.1_g000047 Rmu_sc0000284.1_g000007 Rmu_sc0000288.1_g000006 Rmu_sc0000507.1_g000017 Rmu_sc0000580.1_g000015 Rmu_sc0000663.1_g000011 Rmu_sc0000675.1_g000024 Rmu_sc0000693.1_g000072 Rmu_sc0000779.1_g000005 Rmu_sc0000851.1_g000015 Rmu_sc0000962.1_g000001 Rmu_sc0001493.1_g000055 Rmu_sc0001669.1_g000025 Rmu_sc0001891.1_g000051 Rmu_sc0001926.1_g000007 Rmu_sc0002082.1_g000025 Rmu_sc0002141.1_g000001 Rmu_sc0002141.1_g000004 Rmu_sc0002414.1_g000012 Rmu_sc0002557.1_g000022 Rmu_sc0002709.1_g000038 Rmu_sc0002897.1_g000004 Rmu_sc0002934.1_g000055 Rmu_sc0003692.1_g000017 Rmu_sc0004283.1_g000068 Rmu_sc0004598.1_g000010 Rmu_sc0004614.1_g000004 Rmu_sc0004805.1_g000006 Rmu_sc0005142.1_g000041 Rmu_sc0005777.1_g000001 Rmu_sc0006420.1_g000019 Rmu_sc0006803.1_g000016 Rmu_sc0007034.1_g000015 Rmu_sc0008079.1_g000017 Rmu_sc0008148.1_g000040 Rmu_sc0008608.1_g000007 Rmu_sc0008675.1_g000001 Rmu_sc0009663.1_g000001 Rmu_sc0010188.1_g000003 Rmu_sc0010739.1_g000005 Rmu_sc0016265.1_g000001 Rmu_sc0031757.1_g000001 Rmu_ssc0000087.1_g000024 Rmu_ssc0000438.1_g000029
rosa_roxburghii	Rroxscaffold_1G00003350
rosa_rugosa	Rorug03G0248400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	109
AasI	GACNNNNNNGTC	1 cut(s)	644
Acc36I	ACCTGC	1 cut(s)	109
AccII	CGCG	2 cut(s)	200, 211
AccIII	TCCGGA	1 cut(s)	980
AciI	CCGC	1 cut(s)	930
AclWI	GGATC	4 cut(s)	67, 730, 738, 751
AcsI	RAATTY	2 cut(s)	4, 698
AfaI	GTAC	1 cut(s)	92
AfiI	CCNNNNNNNGG	4 cut(s)	75, 92, 507, 851
AgeI	ACCGGT	1 cut(s)	507
AgsI	TTSAA	4 cut(s)	309, 596, 694, 804
AjnI	CCWGG	2 cut(s)	543, 816
AluBI	AGCT	7 cut(s)	56, 158, 243, 527, 550, 964, 986
AluI	AGCT	7 cut(s)	56, 158, 243, 527, 550, 964, 986
Alw21I	GWGCWC	1 cut(s)	966
Alw26I	GTCTC	1 cut(s)	821
AlwI	GGATC	4 cut(s)	67, 730, 738, 751
Ama87I	CYCGRG	2 cut(s)	175, 675
Aor13HI	TCCGGA	1 cut(s)	980
AoxI	GGCC	4 cut(s)	32, 41, 94, 494
ApeKI	GCWGC	2 cut(s)	464, 986
ApoI	RAATTY	2 cut(s)	4, 698
AsiGI	ACCGGT	1 cut(s)	507
Asp700I	GAANNNNTTC	1 cut(s)	647
AspLEI	GCGC	4 cut(s)	173, 202, 213, 902
AspS9I	GGNCC	6 cut(s)	33, 41, 66, 95, 189, 771
AsuC2I	CCSGG	2 cut(s)	77, 469
AsuHPI	GGTGA	3 cut(s)	330, 806, 866
AsuII	TTCGAA	2 cut(s)	238, 325
AvaI	CYCGRG	2 cut(s)	175, 675
AvaII	GGWCC	3 cut(s)	66, 189, 771
BamHI	GGATCC	1 cut(s)	743
BanII	GRGCYC	1 cut(s)	966
BbsI	GAAGAC	2 cut(s)	640, 884
Bbv12I	GWGCWC	1 cut(s)	966
BbvI	GCAGC	2 cut(s)	476, 973
BccI	CCATC	4 cut(s)	44, 303, 758, 985
BceAI	ACGGC	2 cut(s)	109, 123
BciT130I	CCWGG	2 cut(s)	545, 818
BcnI	CCSGG	2 cut(s)	77, 469
BcoDI	GTCTC	1 cut(s)	821
BfmI	CTRYAG	1 cut(s)	57
BfoI	RGCGCY	1 cut(s)	174
BfuAI	ACCTGC	1 cut(s)	109
BglI	GCCNNNNNGGC	2 cut(s)	40, 493
BglII	AGATCT	1 cut(s)	600
BisI	GCNGC	2 cut(s)	465, 987
BlpI	GCTNAGC	1 cut(s)	965
BlsI	GCNGC	2 cut(s)	466, 988
Bme1390I	CCNGG	4 cut(s)	77, 469, 545, 818
Bme18I	GGWCC	3 cut(s)	66, 189, 771
BmeT110I	CYCGRG	2 cut(s)	175, 675
BmgT120I	GGNCC	6 cut(s)	33, 41, 66, 95, 189, 771
BmiI	GGNNCC	4 cut(s)	191, 372, 659, 745
BmrFI	CCNGG	4 cut(s)	77, 469, 545, 818
BpiI	GAAGAC	2 cut(s)	640, 884
BplI	GAGNNNNNCTC	2 cut(s)	169, 201
BpmI	CTGGAG	3 cut(s)	527, 567, 828
Bpu10I	CCTNAGC	1 cut(s)	925
Bpu1102I	GCTNAGC	1 cut(s)	965
Bpu14I	TTCGAA	2 cut(s)	238, 325
BpuEI	CTTGAG	2 cut(s)	653, 980
BpuMI	CCSGG	2 cut(s)	77, 469
BsaJI	CCNNGG	5 cut(s)	76, 105, 441, 865, 888
BsaWI	WCCGGW	2 cut(s)	507, 980
BsaXI	ACNNNNNCTCC	4 cut(s)	188, 218, 259, 289
Bsc4I	CCNNNNNNNGG	4 cut(s)	75, 92, 507, 851
Bse118I	RCCGGY	1 cut(s)	507
Bse1I	ACTGG	3 cut(s)	501, 802, 811
BseAI	TCCGGA	1 cut(s)	980
BseBI	CCWGG	2 cut(s)	545, 818
BseDI	CCNNGG	5 cut(s)	76, 105, 441, 865, 888
BseGI	GGATG	2 cut(s)	884, 977
BseLI	CCNNNNNNNGG	4 cut(s)	75, 92, 507, 851
BseMII	CTCAG	2 cut(s)	939, 979
BseNI	ACTGG	3 cut(s)	501, 802, 811
BseRI	GAGGAG	2 cut(s)	267, 458
BseXI	GCAGC	2 cut(s)	476, 973
BseYI	CCCAGC	2 cut(s)	405, 429
Bsh1236I	CGCG	2 cut(s)	200, 211
BshFI	GGCC	4 cut(s)	34, 43, 96, 496
BshTI	ACCGGT	1 cut(s)	507
BsiHKAI	GWGCWC	1 cut(s)	966
BsiHKCI	CYCGRG	2 cut(s)	175, 675
BsiSI	CCGG	4 cut(s)	76, 468, 508, 981
BslFI	GGGAC	1 cut(s)	175
BslI	CCNNNNNNNGG	4 cut(s)	75, 92, 507, 851
BsmAI	GTCTC	1 cut(s)	821
BsmFI	GGGAC	1 cut(s)	175
BsnI	GGCC	4 cut(s)	34, 43, 96, 496
BsoBI	CYCGRG	2 cut(s)	175, 675
Bsp119I	TTCGAA	2 cut(s)	238, 325
Bsp1286I	GDGCHC	1 cut(s)	966
Bsp13I	TCCGGA	1 cut(s)	980
Bsp1720I	GCTNAGC	1 cut(s)	965
BspACI	CCGC	1 cut(s)	930
BspANI	GGCC	4 cut(s)	34, 43, 96, 496
BspCNI	CTCAG	2 cut(s)	938, 978
BspEI	TCCGGA	1 cut(s)	980
BspFNI	CGCG	2 cut(s)	200, 211
BspLI	GGNNCC	4 cut(s)	191, 372, 659, 745
BspMI	ACCTGC	1 cut(s)	109
BspPI	GGATC	4 cut(s)	67, 730, 738, 751
BspT104I	TTCGAA	2 cut(s)	238, 325
BsrFI	RCCGGY	1 cut(s)	507
BsrI	ACTGG	3 cut(s)	501, 802, 811
BssAI	RCCGGY	1 cut(s)	507
BssECI	CCNNGG	5 cut(s)	76, 105, 441, 865, 888
BssT1I	CCWWGG	1 cut(s)	865
Bst2UI	CCWGG	2 cut(s)	545, 818
Bst4CI	ACNGT	3 cut(s)	61, 854, 941
Bst6I	CTCTTC	3 cut(s)	296, 319, 837
BstBI	TTCGAA	2 cut(s)	238, 325
BstC8I	GCNNGC	1 cut(s)	83
BstDEI	CTNAG	4 cut(s)	533, 925, 965, 999
BstDSI	CCRYGG	1 cut(s)	105
BstEII	GGTNACC	1 cut(s)	869
BstF5I	GGATG	2 cut(s)	884, 977
BstFNI	CGCG	2 cut(s)	200, 211
BstH2I	RGCGCY	1 cut(s)	174
BstHHI	GCGC	4 cut(s)	173, 202, 213, 902
BstMAI	GTCTC	1 cut(s)	821
BstMWI	GCNNNNNNNGC	4 cut(s)	40, 208, 493, 995
BstNI	CCWGG	2 cut(s)	545, 818
BstPI	GGTNACC	1 cut(s)	869
BstSCI	CCNGG	4 cut(s)	75, 467, 543, 816
BstSFI	CTRYAG	1 cut(s)	57
BstUI	CGCG	2 cut(s)	200, 211
BstV1I	GCAGC	2 cut(s)	476, 973
BstV2I	GAAGAC	2 cut(s)	640, 884
BstX2I	RGATCY	3 cut(s)	600, 722, 743
BstYI	RGATCY	3 cut(s)	600, 722, 743
BsuRI	GGCC	4 cut(s)	34, 43, 96, 496
BtgI	CCRYGG	1 cut(s)	105
BtsCI	GGATG	2 cut(s)	884, 977
BtsIMutI	CAGTG	3 cut(s)	66, 795, 946
BveI	ACCTGC	1 cut(s)	109
Cac8I	GCNNGC	1 cut(s)	83
CfoI	GCGC	4 cut(s)	173, 202, 213, 902
Cfr10I	RCCGGY	1 cut(s)	507
Cfr13I	GGNCC	6 cut(s)	33, 41, 66, 95, 189, 771
Csp6I	GTAC	1 cut(s)	91
CspAI	ACCGGT	1 cut(s)	507
CviAII	CATG	2 cut(s)	367, 847
CviQI	GTAC	1 cut(s)	91
DdeI	CTNAG	4 cut(s)	533, 925, 965, 999
DrdI	GACNNNNNNGTC	1 cut(s)	644
DseDI	GACNNNNNNGTC	1 cut(s)	644
Eam1104I	CTCTTC	3 cut(s)	296, 319, 837
EarI	CTCTTC	3 cut(s)	296, 319, 837
Ecl136II	GAGCTC	1 cut(s)	964
Eco130I	CCWWGG	1 cut(s)	865
Eco24I	GRGCYC	1 cut(s)	966
Eco47I	GGWCC	3 cut(s)	66, 189, 771
Eco53kI	GAGCTC	1 cut(s)	964
Eco88I	CYCGRG	2 cut(s)	175, 675
Eco91I	GGTNACC	1 cut(s)	869
EcoICRI	GAGCTC	1 cut(s)	964
EcoO109I	RGGNCCY	1 cut(s)	66
EcoO65I	GGTNACC	1 cut(s)	869
EcoRII	CCWGG	2 cut(s)	543, 816
EcoT14I	CCWWGG	1 cut(s)	865
EcoT38I	GRGCYC	1 cut(s)	966
ErhI	CCWWGG	1 cut(s)	865
FaeI	CATG	2 cut(s)	370, 850
FaiI	YATR	6 cut(s)	368, 558, 624, 848, 904, 906
FalI	AAGNNNNNCTT	2 cut(s)	632, 664
FaqI	GGGAC	1 cut(s)	175
FatI	CATG	2 cut(s)	366, 846
FauNDI	CATATG	1 cut(s)	904
Fnu4HI	GCNGC	2 cut(s)	465, 987
FokI	GGATG	2 cut(s)	871, 964
FriOI	GRGCYC	1 cut(s)	966
Fsp4HI	GCNGC	2 cut(s)	465, 987
GlaI	GCGC	4 cut(s)	172, 201, 212, 901
GluI	GCNGC	2 cut(s)	465, 987
GsaI	CCCAGC	2 cut(s)	409, 433
GsuI	CTGGAG	3 cut(s)	527, 567, 828
HaeII	RGCGCY	1 cut(s)	174
HaeIII	GGCC	4 cut(s)	34, 43, 96, 496
HapII	CCGG	4 cut(s)	76, 468, 508, 981
HhaI	GCGC	4 cut(s)	173, 202, 213, 902
Hin1II	CATG	2 cut(s)	370, 850
Hin6I	GCGC	4 cut(s)	171, 200, 211, 900
HinP1I	GCGC	4 cut(s)	171, 200, 211, 900
HinfI	GANTC	8 cut(s)	28, 140, 180, 305, 514, 537, 592, 829
HpaII	CCGG	4 cut(s)	76, 468, 508, 981
HphI	GGTGA	3 cut(s)	330, 806, 866
Hpy166II	GTNNAC	1 cut(s)	513
Hpy188I	TCNGA	5 cut(s)	25, 139, 705, 743, 889
Hpy8I	GTNNAC	1 cut(s)	513
HpyAV	CCTTC	5 cut(s)	127, 282, 617, 688, 887
HpyCH4III	ACNGT	3 cut(s)	61, 854, 941
HpyCH4IV	ACGT	2 cut(s)	645, 861
HpyCH4V	TGCA	3 cut(s)	385, 616, 850
HpyF10VI	GCNNNNNNNGC	4 cut(s)	40, 208, 493, 995
HpyF3I	CTNAG	4 cut(s)	533, 925, 965, 999
HpySE526I	ACGT	2 cut(s)	645, 861
Hsp92II	CATG	2 cut(s)	370, 850
HspAI	GCGC	4 cut(s)	171, 200, 211, 900
Kpn2I	TCCGGA	1 cut(s)	980
LmnI	GCTCC	2 cut(s)	547, 983
Lsp1109I	GCAGC	2 cut(s)	476, 973
MaeII	ACGT	2 cut(s)	645, 861
MaeIII	GTNAC	5 cut(s)	396, 503, 869, 908, 932
MboII	GAAGA	8 cut(s)	247, 278, 283, 306, 314, 640, 824, 889
MflI	RGATCY	3 cut(s)	600, 722, 743
MhlI	GDGCHC	1 cut(s)	966
MluCI	AATT	6 cut(s)	4, 262, 330, 419, 698, 736
MlyI	GAGTC	2 cut(s)	508, 823
MroI	TCCGGA	1 cut(s)	980
MroXI	GAANNNNTTC	1 cut(s)	647
MseI	TTAA	1 cut(s)	570
MslI	CAYNNNNRTG	1 cut(s)	365
MspI	CCGG	4 cut(s)	76, 468, 508, 981
MspR9I	CCNGG	4 cut(s)	77, 469, 545, 818
MvaI	CCWGG	2 cut(s)	545, 818
MvnI	CGCG	2 cut(s)	200, 211
MwoI	GCNNNNNNNGC	4 cut(s)	40, 208, 493, 995
NciI	CCSGG	2 cut(s)	77, 469
NdeI	CATATG	1 cut(s)	904
NlaIII	CATG	2 cut(s)	370, 850
NlaIV	GGNNCC	4 cut(s)	191, 372, 659, 745
NspV	TTCGAA	2 cut(s)	238, 325
PaeR7I	CTCGAG	2 cut(s)	175, 675
PaqCI	CACCTGC	1 cut(s)	109
PcsI	WCGNNNNNNNCGW	1 cut(s)	858
PdmI	GAANNNNTTC	1 cut(s)	647
PfeI	GAWTC	6 cut(s)	28, 140, 180, 305, 537, 592
PfoI	TCCNGGA	1 cut(s)	543
PinAI	ACCGGT	1 cut(s)	507
PkrI	GCNGC	2 cut(s)	466, 988
PleI	GAGTC	2 cut(s)	508, 823
PpsI	GAGTC	2 cut(s)	508, 823
PpuMI	RGGWCCY	1 cut(s)	66
Psp124BI	GAGCTC	1 cut(s)	966
Psp5II	RGGWCCY	1 cut(s)	66
Psp6I	CCWGG	2 cut(s)	543, 816
PspEI	GGTNACC	1 cut(s)	869
PspFI	CCCAGC	2 cut(s)	405, 429
PspGI	CCWGG	2 cut(s)	543, 816
PspN4I	GGNNCC	4 cut(s)	191, 372, 659, 745
PspPI	GGNCC	6 cut(s)	33, 41, 66, 95, 189, 771
PspPPI	RGGWCCY	1 cut(s)	66
PsuI	RGATCY	3 cut(s)	600, 722, 743
RsaI	GTAC	1 cut(s)	92
RsaNI	GTAC	1 cut(s)	91
RseI	CAYNNNNRTG	1 cut(s)	365
SacI	GAGCTC	1 cut(s)	966
SaqAI	TTAA	1 cut(s)	570
SatI	GCNGC	2 cut(s)	465, 987
Sau96I	GGNCC	6 cut(s)	33, 41, 66, 95, 189, 771
SchI	GAGTC	2 cut(s)	508, 823
ScrFI	CCNGG	4 cut(s)	77, 469, 545, 818
SduI	GDGCHC	1 cut(s)	966
SfcI	CTRYAG	1 cut(s)	57
SfiI	GGCCNNNNNGGCC	1 cut(s)	40
Sfr274I	CTCGAG	2 cut(s)	175, 675
SfuI	TTCGAA	2 cut(s)	238, 325
SinI	GGWCC	3 cut(s)	66, 189, 771
SlaI	CTCGAG	2 cut(s)	175, 675
SmiMI	CAYNNNNRTG	1 cut(s)	365
SmlI	CTYRAG	4 cut(s)	175, 668, 675, 959
SmoI	CTYRAG	4 cut(s)	175, 668, 675, 959
Sse9I	AATT	6 cut(s)	4, 262, 330, 419, 698, 736
SsiI	CCGC	1 cut(s)	930
SstI	GAGCTC	1 cut(s)	966
StyD4I	CCNGG	4 cut(s)	75, 467, 543, 816
StyI	CCWWGG	1 cut(s)	865
TaaI	ACNGT	3 cut(s)	61, 854, 941
TaiI	ACGT	2 cut(s)	648, 864
TaqI	TCGA	7 cut(s)	176, 238, 325, 633, 676, 729, 825
TaqII	GACCGA	1 cut(s)	177
TasI	AATT	6 cut(s)	4, 262, 330, 419, 698, 736
TfiI	GAWTC	6 cut(s)	28, 140, 180, 305, 537, 592
Tru1I	TTAA	1 cut(s)	570
Tru9I	TTAA	1 cut(s)	570
TscAI	CASTG	3 cut(s)	66, 802, 946
TseI	GCWGC	2 cut(s)	464, 986
TspDTI	ATGAA	4 cut(s)	17, 247, 310, 599
TspGWI	ACGGA	2 cut(s)	145, 215
TspRI	CASTG	3 cut(s)	66, 802, 946
VpaK11BI	GGWCC	3 cut(s)	66, 189, 771
XapI	RAATTY	2 cut(s)	4, 698
XhoI	CTCGAG	2 cut(s)	175, 675
XmnI	GAANNNNTTC	1 cut(s)	647

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.