Rmu_sc0015790.1_g000004

kDa class II heat shock protein-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015790.1
Physical Location & Seq
Reverse (-)
11154 .. 11375
222 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015790.1_g000004.1.cds

Sequence Viewer

Length: 222 bp
ctgatcagcggcgagaggaagagggaggacgagaaagagggggtaaagtatttgaggatggaaaggagggttggcaagtttatgaggaagtttgtgctgcctgagaatgctaatgctgatgccatttctgctgtttgccaagatggggttcttactgtgactgtggagaaggtgccaccgcctcagccgaagaccaagactattgaggtcaagattggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

73

Amino Acids

8.23

Weight (kDa)

9.46

Isoelectric Point (pI)

43.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 172
AciI CCGC 2 cut(s) 9, 179
AfiI CCNNNNNNNGG 1 cut(s) 145
AjuI GAANNNNNNNTTGG 4 cut(s) 54, 86, 132, 164
ApeKI GCWGC 1 cut(s) 97
BanI GGYRCC 1 cut(s) 172
BbsI GAAGAC 1 cut(s) 197
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 1 cut(s) 84
BccI CCATC 2 cut(s) 52, 137
BclI TGATCA 1 cut(s) 3
BisI GCNGC 2 cut(s) 10, 98
BlsI GCNGC 2 cut(s) 11, 99
BmiI GGNNCC 1 cut(s) 174
BmsI GCATC 1 cut(s) 109
BpiI GAAGAC 1 cut(s) 197
Bpu10I CCTNAGC 1 cut(s) 183
Bsc4I CCNNNNNNNGG 1 cut(s) 145
BseGI GGATG 1 cut(s) 63
BseLI CCNNNNNNNGG 1 cut(s) 145
BseMII CTCAG 2 cut(s) 93, 197
BseXI GCAGC 1 cut(s) 84
BshNI GGYRCC 1 cut(s) 172
BslI CCNNNNNNNGG 1 cut(s) 145
BsmI GAATGC 1 cut(s) 112
Bsp143I GATC 1 cut(s) 3
BspACI CCGC 2 cut(s) 9, 179
BspCNI CTCAG 2 cut(s) 94, 196
BspLI GGNNCC 1 cut(s) 174
BspT107I GGYRCC 1 cut(s) 172
BssMI GATC 1 cut(s) 3
Bst4CI ACNGT 2 cut(s) 157, 163
Bst6I CTCTTC 1 cut(s) 14
BstDEI CTNAG 2 cut(s) 102, 183
BstF5I GGATG 1 cut(s) 63
BstKTI GATC 1 cut(s) 6
BstMBI GATC 1 cut(s) 3
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstV1I GCAGC 1 cut(s) 84
BstV2I GAAGAC 1 cut(s) 197
BtsCI GGATG 1 cut(s) 63
CviJI RGCY 1 cut(s) 187
CviKI_1 RGCY 1 cut(s) 187
DdeI CTNAG 2 cut(s) 102, 183
DpnI GATC 1 cut(s) 5
DpnII GATC 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 14
EarI CTCTTC 1 cut(s) 14
FaiI YATR 1 cut(s) 83
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 2 cut(s) 10, 98
FokI GGATG 1 cut(s) 70
Fsp4HI GCNGC 2 cut(s) 10, 98
GluI GCNGC 2 cut(s) 10, 98
Hpy188III TCNNGA 1 cut(s) 211
HpyAV CCTTC 1 cut(s) 163
HpyCH4III ACNGT 2 cut(s) 157, 163
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
HpyF3I CTNAG 2 cut(s) 102, 183
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 1 cut(s) 3
LpnPI CCDG 1 cut(s) 114
Lsp1109I GCAGC 1 cut(s) 84
LweI GCATC 1 cut(s) 109
MaeIII GTNAC 1 cut(s) 157
MalI GATC 1 cut(s) 5
MboI GATC 1 cut(s) 3
MboII GAAGA 2 cut(s) 31, 202
MnlI CCTC 9 cut(s) 9, 15, 19, 31, 48, 60, 78, 192, 199
MspA1I CMGCKG 1 cut(s) 9
Mva1269I GAATGC 1 cut(s) 112
MwoI GCNNNNNNNGC 1 cut(s) 128
NdeII GATC 1 cut(s) 3
NlaIV GGNNCC 1 cut(s) 174
NmuCI GTSAC 1 cut(s) 157
PctI GAATGC 1 cut(s) 112
PkrI GCNGC 2 cut(s) 11, 99
PspN4I GGNNCC 1 cut(s) 174
SatI GCNGC 2 cut(s) 10, 98
Sau3AI GATC 1 cut(s) 3
SetI ASST 2 cut(s) 174, 210
SfaNI GCATC 1 cut(s) 109
SgeI CNNG 6 cut(s) 25, 43, 88, 113, 152, 208
SsiI CCGC 2 cut(s) 9, 179
TaaI ACNGT 2 cut(s) 157, 163
TauI GCSGC 1 cut(s) 12
TseFI GTSAC 1 cut(s) 157
TseI GCWGC 1 cut(s) 97
Tsp45I GTSAC 1 cut(s) 157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.