Rmu_sc0040252.1_g000001

Cystinosin homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0040252.1
Physical Location & Seq
Forward (+)
285 .. 663
379 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0040252.1_g000001.1.cds

Sequence Viewer

Length: 261 bp
atggcgtcttggaattcagtcccactcgaaatcacatacgaagttctgggttggttggccttcatttcatggtccatcagcttttacccacaagtcatcttaaactttcgcagaaaaagtgttattgggttgaacttcgatttcgtgctactgaatttaaccaagcactcgtcgtatctcatttacaacgccactctctacttcagctccgccgttcaaaaacagtacttggagaaatatggactcggagaggtttgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

86

Amino Acids

10.0

Weight (kDa)

7.84

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 210
AcsI RAATTY 2 cut(s) 13, 154
AcuI CTGAAG 1 cut(s) 187
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 227
AgsI TTSAA 2 cut(s) 133, 218
AluBI AGCT 2 cut(s) 81, 207
AluI AGCT 2 cut(s) 81, 207
AoxI GGCC 1 cut(s) 57
ApoI RAATTY 2 cut(s) 13, 154
AspS9I GGNCC 1 cut(s) 72
AvaII GGWCC 1 cut(s) 72
BccI CCATC 1 cut(s) 83
BceAI ACGGC 1 cut(s) 197
BmcAI AGTACT 1 cut(s) 227
Bme18I GGWCC 1 cut(s) 72
BmgT120I GGNCC 1 cut(s) 72
BsaHI GRCGYC 1 cut(s) 5
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
BshFI GGCC 1 cut(s) 59
BslFI GGGAC 1 cut(s) 5
BsmFI GGGAC 1 cut(s) 5
BsnI GGCC 1 cut(s) 59
BspACI CCGC 1 cut(s) 210
BspANI GGCC 1 cut(s) 59
BssNI GRCGYC 1 cut(s) 5
Bst4CI ACNGT 1 cut(s) 225
BstACI GRCGYC 1 cut(s) 5
BsuRI GGCC 1 cut(s) 59
Cfr13I GGNCC 1 cut(s) 72
Csp6I GTAC 1 cut(s) 226
CviAII CATG 1 cut(s) 69
CviJI RGCY 3 cut(s) 59, 81, 207
CviKI_1 RGCY 3 cut(s) 59, 81, 207
CviQI GTAC 1 cut(s) 226
EciI GGCGGA 1 cut(s) 199
Eco47I GGWCC 1 cut(s) 72
Eco57I CTGAAG 1 cut(s) 187
EcoRI GAATTC 1 cut(s) 13
FaeI CATG 1 cut(s) 72
FaiI YATR 3 cut(s) 37, 70, 240
FaqI GGGAC 1 cut(s) 5
FatI CATG 1 cut(s) 68
HaeIII GGCC 1 cut(s) 59
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 1 cut(s) 72
HinfI GANTC 1 cut(s) 243
Hpy188I TCNGA 1 cut(s) 248
Hpy99I CGWCG 1 cut(s) 175
HpyAV CCTTC 1 cut(s) 70
HpyCH4III ACNGT 1 cut(s) 225
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 1 cut(s) 72
LmnI GCTCC 1 cut(s) 212
LpnPI CCDG 1 cut(s) 32
MluCI AATT 2 cut(s) 13, 154
MlyI GAGTC 1 cut(s) 237
MnlI CCTC 1 cut(s) 244
MseI TTAA 3 cut(s) 101, 158, 259
NlaIII CATG 1 cut(s) 72
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
PspPI GGNCC 1 cut(s) 72
RsaI GTAC 1 cut(s) 227
RsaNI GTAC 1 cut(s) 226
SaqAI TTAA 3 cut(s) 101, 158, 259
Sau96I GGNCC 1 cut(s) 72
ScaI AGTACT 1 cut(s) 227
SchI GAGTC 1 cut(s) 237
SetI ASST 3 cut(s) 83, 209, 255
SinI GGWCC 1 cut(s) 72
Sse9I AATT 2 cut(s) 13, 154
SsiI CCGC 1 cut(s) 210
TaaI ACNGT 1 cut(s) 225
TaqI TCGA 2 cut(s) 27, 138
TasI AATT 2 cut(s) 13, 154
TatI WGTACW 1 cut(s) 225
Tru1I TTAA 3 cut(s) 101, 158, 259
Tru9I TTAA 3 cut(s) 101, 158, 259
TspDTI ATGAA 2 cut(s) 52, 57
VpaK11BI GGWCC 1 cut(s) 72
XapI RAATTY 2 cut(s) 13, 154
ZrmI AGTACT 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.