Cytochrome p450
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g09120 FvH4_7g09120 FvH4_7g09121 FvH4_7g09121 FvH4_7g09121 FvH4_7g09121 FvH4_7g09121 FvH4_7g09121 |
| prunus_persica | Prupe.2G120000_v2.0.a1 |
| pyrus_communis | pycom07g07840 |
| rosa_chinensis | RchiOBHm_Chr1g0344951 RchiOBHm_Chr1g0344991 RchiOBHm_Chr1g0345031 RchiOBHm_Chr1g0345051 RchiOBHm_Chr4g0385671 |
| rosa_laevigata | RLG00000028855 RLG00000028856 RLG00000028859 |
| rosa_multiflora | Rmu_sc0001143.1_g000032 Rmu_sc0003762.1_g000011 Rmu_sc0003762.1_g000012 Rmu_sc0005950.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00028900 Rroxscaffold_2G00116830 Rroxscaffold_3G00237850 Rroxscaffold_4G00305130 Rroxscaffold_4G00309370 Rroxscaffold_4G00309380 Rroxscaffold_4G00309400 Rroxscaffold_4G00309410 |
| rosa_rugosa | Rorug01G0175700 Rorug01G0175800 |
| rosa_samantha | Rh1AG193400 Rh1AG193600 Rh1AG193800 Rh1BG159600 Rh1BG160200 Rh1BG160300 Rh1CG178500 Rh1CG178600 Rh1CG178700 Rh1DG190400 Rh1DG190800 |
| rosa_wichuraiana | Rw1G015930 Rw1G015950 Rw1G015960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 248 |
| AclWI | GGATC | 2 cut(s) | 179, 233 |
| AfaI | GTAC | 1 cut(s) | 96 |
| AgsI | TTSAA | 3 cut(s) | 161, 330, 380 |
| AjnI | CCWGG | 1 cut(s) | 382 |
| AluBI | AGCT | 2 cut(s) | 157, 254 |
| AluI | AGCT | 2 cut(s) | 157, 254 |
| AlwI | GGATC | 2 cut(s) | 179, 233 |
| AoxI | GGCC | 1 cut(s) | 179 |
| AspS9I | GGNCC | 1 cut(s) | 179 |
| BccI | CCATC | 1 cut(s) | 235 |
| BciT130I | CCWGG | 1 cut(s) | 384 |
| BfaI | CTAG | 1 cut(s) | 401 |
| BfmI | CTRYAG | 1 cut(s) | 255 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 142 |
| Bme1390I | CCNGG | 1 cut(s) | 384 |
| BmgT120I | GGNCC | 1 cut(s) | 179 |
| BmrFI | CCNGG | 1 cut(s) | 384 |
| Bse3DI | GCAATG | 1 cut(s) | 359 |
| BseBI | CCWGG | 1 cut(s) | 384 |
| BseMI | GCAATG | 1 cut(s) | 359 |
| BseRI | GAGGAG | 1 cut(s) | 37 |
| BshFI | GGCC | 1 cut(s) | 181 |
| BsnI | GGCC | 1 cut(s) | 181 |
| Bsp143I | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| BspANI | GGCC | 1 cut(s) | 181 |
| BspPI | GGATC | 2 cut(s) | 179, 233 |
| BsrDI | GCAATG | 1 cut(s) | 359 |
| BssMI | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| Bst2UI | CCWGG | 1 cut(s) | 384 |
| Bst6I | CTCTTC | 2 cut(s) | 14, 215 |
| BstDEI | CTNAG | 1 cut(s) | 146 |
| BstKTI | GATC | 6 cut(s) | 66, 152, 166, 174, 228, 420 |
| BstMBI | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 142 |
| BstNI | CCWGG | 1 cut(s) | 384 |
| BstNSI | RCATGY | 1 cut(s) | 400 |
| BstSCI | CCNGG | 1 cut(s) | 382 |
| BstSFI | CTRYAG | 1 cut(s) | 255 |
| BsuRI | GGCC | 1 cut(s) | 181 |
| BtsI | GCAGTG | 1 cut(s) | 63 |
| BtsIMutI | CAGTG | 1 cut(s) | 63 |
| Cfr13I | GGNCC | 1 cut(s) | 179 |
| CsiI | ACCWGGT | 1 cut(s) | 382 |
| Csp6I | GTAC | 1 cut(s) | 95 |
| CviAII | CATG | 1 cut(s) | 397 |
| CviJI | RGCY | 5 cut(s) | 136, 145, 157, 181, 254 |
| CviKI_1 | RGCY | 5 cut(s) | 136, 145, 157, 181, 254 |
| CviQI | GTAC | 1 cut(s) | 95 |
| DdeI | CTNAG | 1 cut(s) | 146 |
| DpnI | GATC | 6 cut(s) | 65, 151, 165, 173, 227, 419 |
| DpnII | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| Eam1104I | CTCTTC | 2 cut(s) | 14, 215 |
| EarI | CTCTTC | 2 cut(s) | 14, 215 |
| EcoO109I | RGGNCCY | 1 cut(s) | 179 |
| EcoRII | CCWGG | 1 cut(s) | 382 |
| FaeI | CATG | 1 cut(s) | 400 |
| FaiI | YATR | 7 cut(s) | 68, 109, 117, 197, 398, 407, 422 |
| FatI | CATG | 1 cut(s) | 396 |
| FblI | GTMKAC | 1 cut(s) | 248 |
| FspBI | CTAG | 1 cut(s) | 401 |
| HaeIII | GGCC | 1 cut(s) | 181 |
| Hin1II | CATG | 1 cut(s) | 400 |
| HincII | GTYRAC | 1 cut(s) | 249 |
| HindII | GTYRAC | 1 cut(s) | 249 |
| HindIII | AAGCTT | 1 cut(s) | 155 |
| HinfI | GANTC | 1 cut(s) | 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 249 |
| Hpy188III | TCNNGA | 1 cut(s) | 373 |
| Hpy8I | GTNNAC | 1 cut(s) | 249 |
| HpyAV | CCTTC | 1 cut(s) | 9 |
| HpyCH4IV | ACGT | 1 cut(s) | 369 |
| HpyCH4V | TGCA | 1 cut(s) | 352 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 142 |
| HpyF3I | CTNAG | 1 cut(s) | 146 |
| HpySE526I | ACGT | 1 cut(s) | 369 |
| Hsp92II | CATG | 1 cut(s) | 400 |
| Kzo9I | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| LpnPI | CCDG | 6 cut(s) | 27, 201, 332, 369, 386, 396 |
| MabI | ACCWGGT | 1 cut(s) | 382 |
| MaeI | CTAG | 1 cut(s) | 401 |
| MaeII | ACGT | 1 cut(s) | 369 |
| MaeIII | GTNAC | 1 cut(s) | 392 |
| MalI | GATC | 6 cut(s) | 65, 151, 165, 173, 227, 419 |
| MboI | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| MboII | GAAGA | 5 cut(s) | 24, 31, 73, 173, 232 |
| MlyI | GAGTC | 1 cut(s) | 254 |
| MnlI | CCTC | 7 cut(s) | 15, 18, 112, 135, 216, 295, 351 |
| MslI | CAYNNNNRTG | 1 cut(s) | 215 |
| MspR9I | CCNGG | 1 cut(s) | 384 |
| MvaI | CCWGG | 1 cut(s) | 384 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 142 |
| NdeII | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| NlaIII | CATG | 1 cut(s) | 400 |
| NspI | RCATGY | 1 cut(s) | 400 |
| PleI | GAGTC | 1 cut(s) | 253 |
| PpsI | GAGTC | 1 cut(s) | 253 |
| Psp6I | CCWGG | 1 cut(s) | 382 |
| PspGI | CCWGG | 1 cut(s) | 382 |
| PspPI | GGNCC | 1 cut(s) | 179 |
| RsaI | GTAC | 1 cut(s) | 96 |
| RsaNI | GTAC | 1 cut(s) | 95 |
| RseI | CAYNNNNRTG | 1 cut(s) | 215 |
| SalI | GTCGAC | 1 cut(s) | 247 |
| Sau3AI | GATC | 6 cut(s) | 63, 149, 163, 171, 225, 417 |
| Sau96I | GGNCC | 1 cut(s) | 179 |
| SchI | GAGTC | 1 cut(s) | 254 |
| ScrFI | CCNGG | 1 cut(s) | 384 |
| SetI | ASST | 6 cut(s) | 123, 159, 256, 287, 372, 388 |
| SexAI | ACCWGGT | 1 cut(s) | 382 |
| SfcI | CTRYAG | 1 cut(s) | 255 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 215 |
| SspMI | CTAG | 1 cut(s) | 401 |
| StyD4I | CCNGG | 1 cut(s) | 382 |
| TaiI | ACGT | 1 cut(s) | 372 |
| TaqI | TCGA | 1 cut(s) | 248 |
| TatI | WGTACW | 1 cut(s) | 94 |
| TscAI | CASTG | 1 cut(s) | 63 |
| TspDTI | ATGAA | 3 cut(s) | 233, 305, 378 |
| TspRI | CASTG | 1 cut(s) | 63 |
| XceI | RCATGY | 1 cut(s) | 400 |
| XmiI | GTMKAC | 1 cut(s) | 248 |
| XspI | CTAG | 1 cut(s) | 401 |