Rh2BG420900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0001058
Physical Location & Seq
Forward (+)
59211045 .. 59211593
549 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG420900.1

Sequence Viewer

Length: 549 bp
ATGATGTCAAAATTTCAGTTATCAGAGTACATCATCAGAAATACTGCGGTAGATGTCAATTTTAAGAACCAAAGAGCTCAAATAGCGTTGGACATCCTAAACCAGCGAAGAATATCGGATCTTAGTAACATGTTGATGAGTCTCGGTGGCAGGACCAGTATTGAGCTGTTCCATTTAACCCTAAAGGTTGATGAGATAGATTCTGAGACTACTGCAACAACATTAGAAAGTCCTAGAGCTGCACTTGAGCAAGACTTTGAAATGCTTTTTGAAGGTAATACGCATCCAGGAAGTGATCAATATGATTGTGAAATTGGTAGGGGGTGCATGGCTAGAAACTGTACGGGAGTTATTCCATTCATGATGGATTCAATCCTCAGAAACAATCAACCAATGGAAGACTTCACTACAGTACAAGCGAAGATGAATCCATGTCATCAAGTTGTGAAGAACTCTGATAATGTTTTTGGCTCAAGTTCTTCTAGAACAAGAATGAGCTCCCAAGTCTCAAATCCAAAGCAGCTTCCGAAGCCCAAGAGGAAAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

182

Amino Acids

20.59

Weight (kDa)

7.68

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 47
AclWI GGATC 1 cut(s) 126
AcsI RAATTY 1 cut(s) 11
AfaI GTAC 3 cut(s) 29, 343, 414
AflIII ACRYGT 1 cut(s) 129
AgsI TTSAA 3 cut(s) 260, 272, 372
AjnI CCWGG 1 cut(s) 286
AluBI AGCT 5 cut(s) 77, 166, 239, 498, 523
AluI AGCT 5 cut(s) 77, 166, 239, 498, 523
Alw21I GWGCWC 2 cut(s) 79, 500
Alw26I GTCTC 3 cut(s) 146, 200, 511
AlwI GGATC 1 cut(s) 126
ApeKI GCWGC 2 cut(s) 239, 520
ApoI RAATTY 1 cut(s) 11
AspS9I GGNCC 1 cut(s) 153
AvaII GGWCC 1 cut(s) 153
BanII GRGCYC 2 cut(s) 79, 500
BbsI GAAGAC 1 cut(s) 405
Bbv12I GWGCWC 2 cut(s) 79, 500
BbvI GCAGC 2 cut(s) 226, 532
BccI CCATC 1 cut(s) 358
BciT130I CCWGG 1 cut(s) 288
BclI TGATCA 1 cut(s) 295
BcoDI GTCTC 3 cut(s) 146, 200, 511
BfaI CTAG 3 cut(s) 234, 333, 483
BfmI CTRYAG 1 cut(s) 408
BisI GCNGC 2 cut(s) 240, 521
BlsI GCNGC 2 cut(s) 241, 522
Bme1390I CCNGG 1 cut(s) 288
Bme18I GGWCC 1 cut(s) 153
BmgT120I GGNCC 1 cut(s) 153
BmrFI CCNGG 1 cut(s) 288
BmsI GCATC 1 cut(s) 292
BpiI GAAGAC 1 cut(s) 405
BpuEI CTTGAG 2 cut(s) 266, 457
Bse1I ACTGG 1 cut(s) 156
BseBI CCWGG 1 cut(s) 288
BseGI GGATG 2 cut(s) 93, 283
BseMII CTCAG 2 cut(s) 195, 391
BseNI ACTGG 1 cut(s) 156
BseXI GCAGC 2 cut(s) 226, 532
BsgI GTGCAG 1 cut(s) 225
BsiHKAI GWGCWC 2 cut(s) 79, 500
BsmAI GTCTC 3 cut(s) 146, 200, 511
Bsp1286I GDGCHC 2 cut(s) 79, 500
Bsp143I GATC 2 cut(s) 118, 295
BspACI CCGC 1 cut(s) 47
BspCNI CTCAG 2 cut(s) 196, 390
BspHI TCATGA 1 cut(s) 360
BspPI GGATC 1 cut(s) 126
BsrI ACTGG 1 cut(s) 156
BssMI GATC 2 cut(s) 118, 295
Bst2UI CCWGG 1 cut(s) 288
Bst4CI ACNGT 2 cut(s) 341, 412
BstDEI CTNAG 3 cut(s) 122, 204, 377
BstF5I GGATG 2 cut(s) 93, 283
BstKTI GATC 2 cut(s) 121, 298
BstMAI GTCTC 3 cut(s) 146, 200, 511
BstMBI GATC 2 cut(s) 118, 295
BstMWI GCNNNNNNNGC 2 cut(s) 83, 529
BstNI CCWGG 1 cut(s) 288
BstNSI RCATGY 1 cut(s) 133
BstSCI CCNGG 1 cut(s) 286
BstSFI CTRYAG 1 cut(s) 408
BstV1I GCAGC 2 cut(s) 226, 532
BstV2I GAAGAC 1 cut(s) 405
BstX2I RGATCY 1 cut(s) 118
BstYI RGATCY 1 cut(s) 118
BtsCI GGATG 2 cut(s) 93, 283
CciI TCATGA 1 cut(s) 360
Cfr13I GGNCC 1 cut(s) 153
Csp6I GTAC 3 cut(s) 28, 342, 413
CviAII CATG 4 cut(s) 130, 328, 361, 432
CviJI RGCY 8 cut(s) 77, 166, 239, 332, 471, 498, 523, 532
CviKI_1 RGCY 8 cut(s) 77, 166, 239, 332, 471, 498, 523, 532
CviQI GTAC 3 cut(s) 28, 342, 413
DdeI CTNAG 3 cut(s) 122, 204, 377
DpnI GATC 2 cut(s) 120, 297
DpnII GATC 2 cut(s) 118, 295
Ecl136II GAGCTC 2 cut(s) 77, 498
Eco24I GRGCYC 2 cut(s) 79, 500
Eco47I GGWCC 1 cut(s) 153
Eco53kI GAGCTC 2 cut(s) 77, 498
EcoICRI GAGCTC 2 cut(s) 77, 498
EcoRII CCWGG 1 cut(s) 286
EcoT38I GRGCYC 2 cut(s) 79, 500
FaeI CATG 4 cut(s) 133, 331, 364, 435
FaiI YATR 5 cut(s) 131, 303, 329, 362, 433
FatI CATG 4 cut(s) 129, 327, 360, 431
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 2 cut(s) 240, 521
FokI GGATG 2 cut(s) 80, 270
FriOI GRGCYC 2 cut(s) 79, 500
Fsp4HI GCNGC 2 cut(s) 240, 521
FspBI CTAG 3 cut(s) 234, 333, 483
GluI GCNGC 2 cut(s) 240, 521
Hin1II CATG 4 cut(s) 133, 331, 364, 435
HinfI GANTC 4 cut(s) 139, 200, 368, 427
Hpy188I TCNGA 7 cut(s) 25, 38, 118, 205, 380, 457, 528
Hpy188III TCNNGA 2 cut(s) 361, 483
HpyAV CCTTC 1 cut(s) 266
HpyCH4III ACNGT 2 cut(s) 341, 412
HpyCH4V TGCA 3 cut(s) 215, 242, 327
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 529
HpyF3I CTNAG 3 cut(s) 122, 204, 377
Hsp92II CATG 4 cut(s) 133, 331, 364, 435
Ksp22I TGATCA 1 cut(s) 295
Kzo9I GATC 2 cut(s) 118, 295
LmnI GCTCC 1 cut(s) 503
LpnPI CCDG 5 cut(s) 116, 136, 169, 273, 300
Lsp1109I GCAGC 2 cut(s) 226, 532
LweI GCATC 1 cut(s) 292
MaeI CTAG 3 cut(s) 234, 333, 483
MaeIII GTNAC 1 cut(s) 125
MalI GATC 2 cut(s) 120, 297
MboI GATC 2 cut(s) 118, 295
MboII GAAGA 5 cut(s) 120, 410, 433, 460, 471
MflI RGATCY 1 cut(s) 118
MhlI GDGCHC 2 cut(s) 79, 500
MluCI AATT 3 cut(s) 11, 58, 312
MlyI GAGTC 1 cut(s) 148
MmeI TCCRAC 1 cut(s) 69
MnlI CCTC 2 cut(s) 386, 531
MseI TTAA 2 cut(s) 63, 176
MslI CAYNNNNRTG 1 cut(s) 134
MspR9I CCNGG 1 cut(s) 288
MvaI CCWGG 1 cut(s) 288
MwoI GCNNNNNNNGC 2 cut(s) 83, 529
NdeII GATC 2 cut(s) 118, 295
NlaIII CATG 4 cut(s) 133, 331, 364, 435
NspI RCATGY 1 cut(s) 133
PagI TCATGA 1 cut(s) 360
PciI ACATGT 1 cut(s) 129
PfeI GAWTC 3 cut(s) 200, 368, 427
PfoI TCCNGGA 1 cut(s) 286
PkrI GCNGC 2 cut(s) 241, 522
PleI GAGTC 1 cut(s) 147
PpsI GAGTC 1 cut(s) 147
PscI ACATGT 1 cut(s) 129
Psp124BI GAGCTC 2 cut(s) 79, 500
Psp6I CCWGG 1 cut(s) 286
PspGI CCWGG 1 cut(s) 286
PspPI GGNCC 1 cut(s) 153
PsuI RGATCY 1 cut(s) 118
RsaI GTAC 3 cut(s) 29, 343, 414
RsaNI GTAC 3 cut(s) 28, 342, 413
RseI CAYNNNNRTG 1 cut(s) 134
SacI GAGCTC 2 cut(s) 79, 500
SaqAI TTAA 2 cut(s) 63, 176
SatI GCNGC 2 cut(s) 240, 521
Sau3AI GATC 2 cut(s) 118, 295
Sau96I GGNCC 1 cut(s) 153
SchI GAGTC 1 cut(s) 148
ScrFI CCNGG 1 cut(s) 288
SduI GDGCHC 2 cut(s) 79, 500
SetI ASST 7 cut(s) 79, 168, 189, 241, 277, 500, 525
SfaNI GCATC 1 cut(s) 292
SfcI CTRYAG 1 cut(s) 408
SinI GGWCC 1 cut(s) 153
SmiMI CAYNNNNRTG 1 cut(s) 134
SmlI CTYRAG 2 cut(s) 245, 472
SmoI CTYRAG 2 cut(s) 245, 472
Sse9I AATT 3 cut(s) 11, 58, 312
SsiI CCGC 1 cut(s) 47
SspMI CTAG 3 cut(s) 234, 333, 483
SstI GAGCTC 2 cut(s) 79, 500
StyD4I CCNGG 1 cut(s) 286
TaaI ACNGT 2 cut(s) 341, 412
TasI AATT 3 cut(s) 11, 58, 312
TatI WGTACW 2 cut(s) 27, 412
TfiI GAWTC 3 cut(s) 200, 368, 427
Tru1I TTAA 2 cut(s) 63, 176
Tru9I TTAA 2 cut(s) 63, 176
TseI GCWGC 2 cut(s) 239, 520
TspDTI ATGAA 2 cut(s) 349, 440
VpaK11BI GGWCC 1 cut(s) 153
XapI RAATTY 1 cut(s) 11
XbaI TCTAGA 1 cut(s) 482
XceI RCATGY 1 cut(s) 133
XspI CTAG 3 cut(s) 234, 333, 483
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.