transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14600 AT2G02060 AT2G02060 AT2G02060 AT4G04555 AT4G04580 AT4G04605 |
| fragaria_vesca | FvH4_3g01830 FvH4_3g01830 FvH4_3g01830 FvH4_3g01830 FvH4_3g16530 |
| malus_domestica | MD10G1323600.v1.1 |
| prunus_persica | Prupe.4G018700_v2.0.a1 |
| pyrus_communis | pycom10g27390 |
| rosa_chinensis | RchiOBHm_Chr5g0002671 RchiOBHm_Chr5g0027581 |
| rosa_laevigata | RLG00000008425 RLG00000031051 RLG00000033029 RLG00000033030 |
| rosa_multiflora | Rmu_co8356799.1_g000001 Rmu_sc0001647.1_g000007 Rmu_sc0001969.1_g000009 Rmu_sc0011056.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00051950 Rroxscaffold_1G00073200 Rroxscaffold_5G00355280 |
| rosa_rugosa | Rorug04G0398200 Rorug04G0398300 |
| rosa_samantha | Rh2CG329100 Rh2DG367900 Rh4BG160200 Rh4DG156300 Rh5AG021600 Rh5AG194200 Rh5BG024300 Rh5BG192300 Rh5CG023800 Rh5CG212300 Rh5DG022700 Rh5DG022800 Rh5DG194000 |
| rosa_wichuraiana | Rw0G014380 Rw4G013410 Rw5G002010 Rw5G017700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 256 |
| AgsI | TTSAA | 1 cut(s) | 278 |
| AluBI | AGCT | 3 cut(s) | 45, 128, 312 |
| AluI | AGCT | 3 cut(s) | 45, 128, 312 |
| Alw21I | GWGCWC | 1 cut(s) | 47 |
| ApeKI | GCWGC | 1 cut(s) | 125 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 80, 112, 195, 227 |
| AsuHPI | GGTGA | 3 cut(s) | 116, 234, 245 |
| AsuII | TTCGAA | 1 cut(s) | 218 |
| BanII | GRGCYC | 1 cut(s) | 47 |
| BbsI | GAAGAC | 1 cut(s) | 300 |
| Bbv12I | GWGCWC | 1 cut(s) | 47 |
| BbvI | GCAGC | 1 cut(s) | 137 |
| BccI | CCATC | 1 cut(s) | 174 |
| BclI | TGATCA | 1 cut(s) | 106 |
| BfmI | CTRYAG | 1 cut(s) | 195 |
| BisI | GCNGC | 1 cut(s) | 126 |
| BlsI | GCNGC | 1 cut(s) | 127 |
| BpiI | GAAGAC | 1 cut(s) | 300 |
| Bpu10I | CCTNAGC | 1 cut(s) | 308 |
| Bpu14I | TTCGAA | 1 cut(s) | 218 |
| BsaJI | CCNNGG | 1 cut(s) | 227 |
| BseDI | CCNNGG | 1 cut(s) | 227 |
| BseRI | GAGGAG | 1 cut(s) | 303 |
| BseXI | GCAGC | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 47 |
| Bsp119I | TTCGAA | 1 cut(s) | 218 |
| Bsp1286I | GDGCHC | 1 cut(s) | 47 |
| Bsp143I | GATC | 3 cut(s) | 22, 106, 247 |
| BspACI | CCGC | 1 cut(s) | 256 |
| BspQI | GCTCTTC | 1 cut(s) | 52 |
| BspT104I | TTCGAA | 1 cut(s) | 218 |
| BssECI | CCNNGG | 1 cut(s) | 227 |
| BssMI | GATC | 3 cut(s) | 22, 106, 247 |
| Bst4CI | ACNGT | 2 cut(s) | 199, 299 |
| Bst6I | CTCTTC | 2 cut(s) | 52, 61 |
| BstBI | TTCGAA | 1 cut(s) | 218 |
| BstC8I | GCNNGC | 3 cut(s) | 162, 179, 270 |
| BstDEI | CTNAG | 1 cut(s) | 308 |
| BstEII | GGTNACC | 1 cut(s) | 240 |
| BstKTI | GATC | 3 cut(s) | 25, 109, 250 |
| BstMBI | GATC | 3 cut(s) | 22, 106, 247 |
| BstNSI | RCATGY | 1 cut(s) | 272 |
| BstPI | GGTNACC | 1 cut(s) | 240 |
| BstSFI | CTRYAG | 1 cut(s) | 195 |
| BstV1I | GCAGC | 1 cut(s) | 137 |
| BstV2I | GAAGAC | 1 cut(s) | 300 |
| Cac8I | GCNNGC | 3 cut(s) | 162, 179, 270 |
| CviAII | CATG | 3 cut(s) | 110, 269, 327 |
| CviJI | RGCY | 7 cut(s) | 45, 128, 164, 177, 232, 283, 312 |
| CviKI_1 | RGCY | 7 cut(s) | 45, 128, 164, 177, 232, 283, 312 |
| DdeI | CTNAG | 1 cut(s) | 308 |
| DpnI | GATC | 3 cut(s) | 24, 108, 249 |
| DpnII | GATC | 3 cut(s) | 22, 106, 247 |
| Eam1104I | CTCTTC | 2 cut(s) | 52, 61 |
| EarI | CTCTTC | 2 cut(s) | 52, 61 |
| Ecl136II | GAGCTC | 1 cut(s) | 45 |
| Eco24I | GRGCYC | 1 cut(s) | 47 |
| Eco53kI | GAGCTC | 1 cut(s) | 45 |
| Eco91I | GGTNACC | 1 cut(s) | 240 |
| EcoICRI | GAGCTC | 1 cut(s) | 45 |
| EcoO65I | GGTNACC | 1 cut(s) | 240 |
| EcoT38I | GRGCYC | 1 cut(s) | 47 |
| FaeI | CATG | 3 cut(s) | 113, 272, 330 |
| FaiI | YATR | 8 cut(s) | 79, 111, 116, 150, 210, 270, 322, 328 |
| FatI | CATG | 3 cut(s) | 109, 268, 326 |
| FbaI | TGATCA | 1 cut(s) | 106 |
| Fnu4HI | GCNGC | 1 cut(s) | 126 |
| FriOI | GRGCYC | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 1 cut(s) | 126 |
| GluI | GCNGC | 1 cut(s) | 126 |
| Hin1II | CATG | 3 cut(s) | 113, 272, 330 |
| HphI | GGTGA | 3 cut(s) | 116, 234, 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 145 |
| Hpy188I | TCNGA | 2 cut(s) | 87, 171 |
| Hpy8I | GTNNAC | 1 cut(s) | 145 |
| HpyCH4III | ACNGT | 2 cut(s) | 199, 299 |
| HpyCH4V | TGCA | 3 cut(s) | 125, 268, 272 |
| HpyF3I | CTNAG | 1 cut(s) | 308 |
| Hsp92II | CATG | 3 cut(s) | 113, 272, 330 |
| Ksp22I | TGATCA | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 22, 106, 247 |
| LguI | GCTCTTC | 1 cut(s) | 52 |
| LpnPI | CCDG | 3 cut(s) | 174, 191, 258 |
| Lsp1109I | GCAGC | 1 cut(s) | 137 |
| MaeIII | GTNAC | 1 cut(s) | 240 |
| MalI | GATC | 3 cut(s) | 24, 108, 249 |
| MboI | GATC | 3 cut(s) | 22, 106, 247 |
| MboII | GAAGA | 4 cut(s) | 39, 48, 242, 305 |
| MhlI | GDGCHC | 1 cut(s) | 47 |
| MluCI | AATT | 3 cut(s) | 120, 154, 301 |
| MnlI | CCTC | 3 cut(s) | 64, 237, 281 |
| MspA1I | CMGCKG | 1 cut(s) | 258 |
| NdeII | GATC | 3 cut(s) | 22, 106, 247 |
| NlaIII | CATG | 3 cut(s) | 113, 272, 330 |
| NmeAIII | GCCGAG | 1 cut(s) | 208 |
| NmuCI | GTSAC | 1 cut(s) | 240 |
| NspI | RCATGY | 1 cut(s) | 272 |
| NspV | TTCGAA | 1 cut(s) | 218 |
| PaeI | GCATGC | 1 cut(s) | 272 |
| PciSI | GCTCTTC | 1 cut(s) | 52 |
| PkrI | GCNGC | 1 cut(s) | 127 |
| Psp124BI | GAGCTC | 1 cut(s) | 47 |
| PspEI | GGTNACC | 1 cut(s) | 240 |
| SacI | GAGCTC | 1 cut(s) | 47 |
| SapI | GCTCTTC | 1 cut(s) | 52 |
| SatI | GCNGC | 1 cut(s) | 126 |
| Sau3AI | GATC | 3 cut(s) | 22, 106, 247 |
| SduI | GDGCHC | 1 cut(s) | 47 |
| SetI | ASST | 5 cut(s) | 47, 130, 208, 247, 314 |
| SfcI | CTRYAG | 1 cut(s) | 195 |
| SfuI | TTCGAA | 1 cut(s) | 218 |
| SphI | GCATGC | 1 cut(s) | 272 |
| Sse9I | AATT | 3 cut(s) | 120, 154, 301 |
| SsiI | CCGC | 1 cut(s) | 256 |
| SstI | GAGCTC | 1 cut(s) | 47 |
| TaaI | ACNGT | 2 cut(s) | 199, 299 |
| TaqI | TCGA | 1 cut(s) | 218 |
| TasI | AATT | 3 cut(s) | 120, 154, 301 |
| TseFI | GTSAC | 1 cut(s) | 240 |
| TseI | GCWGC | 1 cut(s) | 125 |
| Tsp45I | GTSAC | 1 cut(s) | 240 |
| XceI | RCATGY | 1 cut(s) | 272 |