AT1G07460

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000256
Physical Location & Seq
Forward (+)
2289959 .. 2291101
1143 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G07460.1

Sequence Viewer

Length: 777 bp
ATGGGTCAAGCCTTCTATGGCTTCCCCATAGCCTTCAAAAACAGTACTAACTCATCAAACTCGTTTTCTTTCTCCACAAGTTTCGTTTTCTCAATCGACGCACCAGGTCATGGCCTAACCTTCCTCATCTCGCCGTCCATGGATTTCACGCAAGCCATGCCGAGCCAGTATCTCGGTCTCTTCAACACTACAAACAATGGAAACTCCACTAACCGAATTCTCGCGGTAGAATTTGACACAGTAAAGTCCAACGAGTTTCTTGACATCGACGATAACCATGTAGGCATCGATGTGAACGGTTTGGTCTCCGTTGAATCTGCACCAGCTGCATTTTTTTCCAACAAGCAAAGCAAGAATATAAGCTTGAAGTTATCGAGCAAAGACCCAATTCGGGCTTGGATCGAATACAATGGAGTAGAAAGGCTTCTCAATGTCACATTGGCTACCCTTGACACTTCTAAGCCTAACTTTCCTCTTTTGTCAAGACAGATGAATCTTTCTGAGATTTTCATGGAGAAAATGTATGTAGGATTCTCGGCATCCACAGGAAACATTACGAGTAATCATGATGTTCTTGGATGGAGCTTTAGCAGAGAAGGAAAACCACAAGACTTTGATCTTAAACTACTTCCTTCGCTTTCAACCCCGTCGCCATCTGACTTTGATGACCTTGATCCCATTCCAGATCCTCCTTCAGATTCAGCAACCGTAAAGCCTAATCACACCAAGACGATGATCATAATCTGCACACTTGCAATAATGATCTTTATGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0002229 GO:0002239 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006970 GO:0007044 GO:0007045 GO:0007154 GO:0007155 GO:0007160 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007584 GO:0008144 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009966 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010646 GO:0014070 GO:0014074 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019199 GO:0019538 GO:0022607 GO:0022610 GO:0023051 GO:0023052 GO:0030054 GO:0030554 GO:0031589 GO:0031667 GO:0031668 GO:0031669 GO:0031670 GO:0032553 GO:0032555 GO:0032559 GO:0032870 GO:0033198 GO:0033554 GO:0034329 GO:0034330 GO:0034332 GO:0034333 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045216 GO:0046683 GO:0046777 GO:0048037 GO:0048041 GO:0048583 GO:0050662 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051287 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070403 GO:0070887 GO:0071214 GO:0071310 GO:0071318 GO:0071369 GO:0071407 GO:0071417 GO:0071470 GO:0071472 GO:0071495 GO:0071496 GO:0071704 GO:0071840 GO:0071944 GO:0097159 GO:0097367 GO:0098542 GO:0104004 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:2000022
KEGG Pathways
Metabolic & Signaling
ko04010 ko04064 ko04620 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05169 map04010 map04064 map04620 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05169
Pfam Domains
Protein Families
Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

258

Amino Acids

28.37

Weight (kDa)

4.8

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 1 - 206 5.7e-69 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 110
AccII CGCG 1 cut(s) 224
AciI CCGC 1 cut(s) 224
AclWI GGATC 3 cut(s) 407, 668, 680
AcsI RAATTY 2 cut(s) 216, 230
AcuI CTGAAG 1 cut(s) 678
AfaI GTAC 1 cut(s) 46
AfiI CCNNNNNNNGG 2 cut(s) 110, 391
AgsI TTSAA 5 cut(s) 37, 184, 314, 367, 642
AjnI CCWGG 1 cut(s) 103
AluBI AGCT 3 cut(s) 326, 363, 585
AluI AGCT 3 cut(s) 326, 363, 585
Alw26I GTCTC 2 cut(s) 182, 310
AlwI GGATC 3 cut(s) 407, 668, 680
AoxI GGCC 1 cut(s) 112
ApeKI GCWGC 1 cut(s) 326
ApoI RAATTY 2 cut(s) 216, 230
Asp700I GAANNNNTTC 1 cut(s) 423
BarI GAAGNNNNNNTAC 2 cut(s) 408, 440
BbvI GCAGC 1 cut(s) 313
BccI CCATC 2 cut(s) 573, 661
BceAI ACGGC 1 cut(s) 118
BciT130I CCWGG 1 cut(s) 105
BclI TGATCA 1 cut(s) 735
BcoDI GTCTC 2 cut(s) 182, 310
BisI GCNGC 1 cut(s) 327
BlsI GCNGC 1 cut(s) 328
BmcAI AGTACT 1 cut(s) 46
Bme1390I CCNGG 1 cut(s) 105
BmrFI CCNGG 1 cut(s) 105
BmsI GCATC 2 cut(s) 294, 548
Bsa29I ATCGAT 1 cut(s) 288
BsaBI GATNNNNATC 1 cut(s) 740
BsaI GGTCTC 2 cut(s) 182, 310
BsaJI CCNNGG 1 cut(s) 138
BsaXI ACNNNNNCTCC 2 cut(s) 506, 536
Bsc4I CCNNNNNNNGG 2 cut(s) 110, 391
Bse1I ACTGG 1 cut(s) 166
Bse8I GATNNNNATC 1 cut(s) 740
BseBI CCWGG 1 cut(s) 105
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 1 cut(s) 138
BseGI GGATG 2 cut(s) 539, 584
BseJI GATNNNNATC 1 cut(s) 740
BseLI CCNNNNNNNGG 2 cut(s) 110, 391
BseMII CTCAG 1 cut(s) 492
BseNI ACTGG 1 cut(s) 166
BseXI GCAGC 1 cut(s) 313
BsgI GTGCAG 2 cut(s) 303, 730
Bsh1236I CGCG 1 cut(s) 224
BshFI GGCC 1 cut(s) 114
BshVI ATCGAT 1 cut(s) 288
BslI CCNNNNNNNGG 2 cut(s) 110, 391
BsmAI GTCTC 2 cut(s) 182, 310
BsnI GGCC 1 cut(s) 114
Bso31I GGTCTC 2 cut(s) 182, 310
Bsp143I GATC 6 cut(s) 399, 616, 673, 685, 735, 762
Bsp19I CCATGG 1 cut(s) 138
BspACI CCGC 1 cut(s) 224
BspANI GGCC 1 cut(s) 114
BspCNI CTCAG 1 cut(s) 493
BspDI ATCGAT 1 cut(s) 288
BspFNI CGCG 1 cut(s) 224
BspHI TCATGA 1 cut(s) 565
BspPI GGATC 3 cut(s) 407, 668, 680
BspTNI GGTCTC 2 cut(s) 182, 310
BsrI ACTGG 1 cut(s) 166
BssECI CCNNGG 1 cut(s) 138
BssMI GATC 6 cut(s) 399, 616, 673, 685, 735, 762
BssT1I CCWWGG 1 cut(s) 138
Bst2UI CCWGG 1 cut(s) 105
Bst4CI ACNGT 4 cut(s) 44, 241, 299, 709
Bst6I CTCTTC 1 cut(s) 185
BstAPI GCANNNNNTGC 2 cut(s) 157, 326
BstC8I GCNNGC 1 cut(s) 153
BstDEI CTNAG 2 cut(s) 459, 501
BstDSI CCRYGG 1 cut(s) 138
BstF5I GGATG 2 cut(s) 539, 584
BstFNI CGCG 1 cut(s) 224
BstKTI GATC 6 cut(s) 402, 619, 676, 688, 738, 765
BstMAI GTCTC 2 cut(s) 182, 310
BstMBI GATC 6 cut(s) 399, 616, 673, 685, 735, 762
BstMWI GCNNNNNNNGC 2 cut(s) 157, 326
BstNI CCWGG 1 cut(s) 105
BstSCI CCNGG 1 cut(s) 103
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 1 cut(s) 313
BstX2I RGATCY 1 cut(s) 685
BstYI RGATCY 1 cut(s) 685
Bsu15I ATCGAT 1 cut(s) 288
BsuRI GGCC 1 cut(s) 114
BsuTUI ATCGAT 1 cut(s) 288
BtgI CCRYGG 1 cut(s) 138
BtsCI GGATG 2 cut(s) 539, 584
Cac8I GCNNGC 1 cut(s) 153
CciI TCATGA 1 cut(s) 565
ClaI ATCGAT 1 cut(s) 288
CseI GACGC 1 cut(s) 107
CsiI ACCWGGT 1 cut(s) 103
Csp6I GTAC 1 cut(s) 45
CviAII CATG 6 cut(s) 110, 139, 157, 278, 511, 566
CviQI GTAC 1 cut(s) 45
DdeI CTNAG 2 cut(s) 459, 501
DpnI GATC 6 cut(s) 401, 618, 675, 687, 737, 764
DpnII GATC 6 cut(s) 399, 616, 673, 685, 735, 762
Eam1104I CTCTTC 1 cut(s) 185
EarI CTCTTC 1 cut(s) 185
Eco130I CCWWGG 1 cut(s) 138
Eco31I GGTCTC 2 cut(s) 182, 310
Eco57I CTGAAG 1 cut(s) 678
EcoRI GAATTC 1 cut(s) 216
EcoRII CCWGG 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 138
ErhI CCWWGG 1 cut(s) 138
FaeI CATG 6 cut(s) 113, 142, 160, 281, 514, 569
FalI AAGNNNNNCTT 2 cut(s) 452, 484
FatI CATG 6 cut(s) 109, 138, 156, 277, 510, 565
FbaI TGATCA 1 cut(s) 735
Fnu4HI GCNGC 1 cut(s) 327
FokI GGATG 2 cut(s) 526, 591
Fsp4HI GCNGC 1 cut(s) 327
GluI GCNGC 1 cut(s) 327
HaeIII GGCC 1 cut(s) 114
HgaI GACGC 1 cut(s) 107
Hin1II CATG 6 cut(s) 113, 142, 160, 281, 514, 569
HindIII AAGCTT 1 cut(s) 361
HinfI GANTC 4 cut(s) 314, 493, 531, 698
Hpy166II GTNNAC 1 cut(s) 295
Hpy188I TCNGA 3 cut(s) 502, 658, 697
Hpy188III TCNNGA 4 cut(s) 260, 483, 566, 683
Hpy8I GTNNAC 1 cut(s) 295
Hpy99I CGWCG 3 cut(s) 101, 272, 652
HpyAV CCTTC 6 cut(s) 22, 43, 130, 590, 642, 702
HpyCH4III ACNGT 4 cut(s) 44, 241, 299, 709
HpyCH4V TGCA 4 cut(s) 320, 329, 747, 755
HpyF10VI GCNNNNNNNGC 2 cut(s) 157, 326
HpyF3I CTNAG 2 cut(s) 459, 501
Hsp92II CATG 6 cut(s) 113, 142, 160, 281, 514, 569
Ksp22I TGATCA 1 cut(s) 735
Kzo9I GATC 6 cut(s) 399, 616, 673, 685, 735, 762
LmnI GCTCC 1 cut(s) 582
LpnPI CCDG 6 cut(s) 90, 117, 179, 336, 531, 696
Lsp1109I GCAGC 1 cut(s) 313
LweI GCATC 2 cut(s) 294, 548
MabI ACCWGGT 1 cut(s) 103
MaeIII GTNAC 1 cut(s) 433
MalI GATC 6 cut(s) 401, 618, 675, 687, 737, 764
MboI GATC 6 cut(s) 399, 616, 673, 685, 735, 762
MboII GAAGA 1 cut(s) 172
MflI RGATCY 1 cut(s) 685
MluCI AATT 3 cut(s) 216, 230, 387
MmeI TCCRAC 2 cut(s) 273, 363
MnlI CCTC 3 cut(s) 134, 483, 699
MroXI GAANNNNTTC 1 cut(s) 423
MseI TTAA 1 cut(s) 621
MslI CAYNNNNRTG 1 cut(s) 290
MspA1I CMGCKG 1 cut(s) 326
MspR9I CCNGG 1 cut(s) 105
MvaI CCWGG 1 cut(s) 105
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 2 cut(s) 157, 326
NcoI CCATGG 1 cut(s) 138
NdeII GATC 6 cut(s) 399, 616, 673, 685, 735, 762
NlaIII CATG 6 cut(s) 113, 142, 160, 281, 514, 569
NmeAIII GCCGAG 2 cut(s) 186, 515
NmuCI GTSAC 1 cut(s) 433
PagI TCATGA 1 cut(s) 565
PdmI GAANNNNTTC 1 cut(s) 423
PfeI GAWTC 4 cut(s) 314, 493, 531, 698
PflMI CCANNNNNTGG 1 cut(s) 110
PkrI GCNGC 1 cut(s) 328
Psp6I CCWGG 1 cut(s) 103
PspGI CCWGG 1 cut(s) 103
PsuI RGATCY 1 cut(s) 685
PvuII CAGCTG 1 cut(s) 326
RsaI GTAC 1 cut(s) 46
RsaNI GTAC 1 cut(s) 45
RseI CAYNNNNRTG 1 cut(s) 290
SaqAI TTAA 1 cut(s) 621
SatI GCNGC 1 cut(s) 327
Sau3AI GATC 6 cut(s) 399, 616, 673, 685, 735, 762
ScaI AGTACT 1 cut(s) 46
ScrFI CCNGG 1 cut(s) 105
SetI ASST 6 cut(s) 109, 122, 328, 365, 587, 672
SexAI ACCWGGT 1 cut(s) 103
SfaNI GCATC 2 cut(s) 294, 548
SmiMI CAYNNNNRTG 1 cut(s) 290
Sse9I AATT 3 cut(s) 216, 230, 387
SsiI CCGC 1 cut(s) 224
StyD4I CCNGG 1 cut(s) 103
StyI CCWWGG 1 cut(s) 138
TaaI ACNGT 4 cut(s) 44, 241, 299, 709
TaqI TCGA 5 cut(s) 96, 267, 288, 374, 402
TaqII GACCGA 1 cut(s) 164
TasI AATT 3 cut(s) 216, 230, 387
TatI WGTACW 1 cut(s) 44
TfiI GAWTC 4 cut(s) 314, 493, 531, 698
Tru1I TTAA 1 cut(s) 621
Tru9I TTAA 1 cut(s) 621
TseFI GTSAC 1 cut(s) 433
TseI GCWGC 1 cut(s) 326
Tsp45I GTSAC 1 cut(s) 433
TspDTI ATGAA 2 cut(s) 499, 506
TspGWI ACGGA 1 cut(s) 298
Van91I CCANNNNNTGG 1 cut(s) 110
XapI RAATTY 2 cut(s) 216, 230
XcmI CCANNNNNNNNNTGG 1 cut(s) 393
XmnI GAANNNNTTC 1 cut(s) 423
ZrmI AGTACT 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.