Rh4BG116400

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
Physical Location & Seq
Forward (+)
19575432 .. 19578318
2887 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG116400.1

Sequence Viewer

Length: 1947 bp
ATGTATTTCAAGCTTGTAATAATTCTCGTAGTACTTGTCGTAGAAGCAGCTGAAGGTTTCGGCTTCACCTACAATGGTTTCGAGTCAGTAACCTTCCAAAACGACTCATGGAGCGGAGTCATGGTTGATGGTTTATTGAGATTAGATCAAGGGGATATCTTCTACCCCGAGCCAGTAACCTTCAAAAAGGACTCATCATCCGGTTCAGAAGTTTTCTCCTTCTCTACCACTTTCGTCTTCGCTATCAGATCAGAATACAAAACTCTCAGAGACCATGGACTCGCCTTTGTTATCTTTCCAGACCAGTACATCCTTTTCAGTGGCTCCGACAATCGGAATATGAGCAATCATGTTTTTGCTGTGGAGCTCGACACGATTCACAGCAAAGATTCCATTCACATCGATGACAATCATGTTGGGATCGACATCAATGGATTCGACTCTTTGAAGTCAGCAACAGCAGGATACTACGTTAACAACGACCCAAGGCACCGAAGGAAATTGAGCCTCACCAGTGGTAATCCAATGACAGTTTGGGTCGAGTATGATGGTAGCCGGAAGCGAATTAATGTTTTTTTGGCTCCAATTGATGTTGGTAAGAAACCACAAATTCCACTCTTGTCTTTGAAATATGACCTTTCCCCAGTCTTTATTAACGAAACTATGTATATTGGCTTCTCCGCATCCTCCAGCTCAGTCATTACATTCCATTATATTTTGGGCTGGAGCTTTCAGATGAATCGCCAAGCTCAAGAACTTGTTCCTTCACTGCTTCCCAAATTGCCTAGGATAGGAGACAAAGAAGTGTCTAAACTTCTGACCTTTGGTGTGCCTGTGATGGCTGTGAGTTTAGTTATGCTAGCGATTTCTCTTGTGGTTTTTGTCATGAGAAGGAAGAAGTACGCAGAACTACTTGAAGATTGGGAGCTCGAGTATGGGCCTCAAAGGTTTAAATACGAAGAATTGTATAGAGCCACTAAAGGGTTTGGAAAGGAAGCGCTCTTGGGTGTTGGGGGATTTGGTGAGGTCTATAGAGGTATATTACCCAGCTCTAAGCTTGACATTGCTGTGAAGAGGGTTTCGCATAAATCAAGACAGGGAATGAAGGAATTTGTTGCAGAAATTGTTAGCCTTGGCCGGCTCCGTCACCGGAATTTAGTACAACTCTTGGGCTATTGCAGGCGAAATGGTGAACTACTTTTGGTGTATTACTATATGCCTAATGGTAGCTTGGACAAGTACCTCTACAACCAACCGAAGGTGACTCTCAACTGGAGTCAGAGATTTAAAGTCATCAAAGGTGTGGCTTCAGGGTTGTGTTATCTTCATGAGGAGTGGGAACAAGTAGTAATTCACAGAGATGTGAAGGCTAGCAATGTGCTACTAGACCAGGATTTGAATGGAAGACTGGGAGATTTTGGACTTGCAAGATTATGTGCCCATGGAACAGACCCTCAAACTACTCATGTAGCTGGTACACTTGGGTATTTAGCCCCGGAGCATGCAAGAACAGGTCGGGCCACCACGAGCACAGACGTGTTTGCTTTCGGGGCATTTTTGCTCGAAGTTGCTTGTGGAAGAAGGCCAATAGAGACACAAGGACCAGAGGAGGATATTGTTTTGGCTCATCGGGTTTTTTCGTGTTGGAATAGAGGTAATATTCTAGAGGCAAGAGATCAAAACTTGGGTAACGATTTTGTTGTTGAGGAAGTGGAATTGGTGCTGAAGCTTGCATTGTTGTGCTCTCGTTCGCAGCCAGCAACCAGGCCAAGCATGCGACAAGTGATGCAGTATTTGGAGGGTGATATTGCTCTTCCGGAGTTGTCACTTCTTCGGCTCTATTCGAGTGGTTTAGCATTTGCGAATGATGAAGGTTCTGATGATGTTGAAATGGCGTATCAGTGTTCATATGTTCCAGAGTCGACTCTCCTATCAGGTGGTCGCTAA

Protein Analysis

648

Amino Acids

72.84

Weight (kDa)

6.24

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 22 - 255 5.2e-57 Legume lectin domain
Pkinase PF00069 331 - 597 3.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 334 - 599 5e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 114
AccI GTMKAC 1 cut(s) 1922
AccIII TCCGGA 1 cut(s) 1816
AciI CCGC 2 cut(s) 114, 681
AclWI GGATC 1 cut(s) 428
AcoI YGGCCR 1 cut(s) 1135
AcsI RAATTY 3 cut(s) 609, 1109, 1153
AcuI CTGAAG 3 cut(s) 72, 1293, 1745
AfaI GTAC 6 cut(s) 33, 308, 902, 1161, 1241, 1477
AfeI AGCGCT 1 cut(s) 999
AfiI CCNNNNNNNGG 4 cut(s) 333, 791, 981, 1258
AflIII ACRYGT 1 cut(s) 1536
AgsI TTSAA 7 cut(s) 10, 184, 448, 628, 917, 1399, 1889
AjiI CACGTC 1 cut(s) 1537
AjnI CCWGG 2 cut(s) 1389, 1763
AleI CACNNNNGTG 1 cut(s) 1535
Alw21I GWGCWC 4 cut(s) 369, 930, 1532, 1745
Alw26I GTCTC 3 cut(s) 264, 789, 1586
AlwI GGATC 1 cut(s) 428
Ama87I CYCGRG 2 cut(s) 167, 929
Aor13HI TCCGGA 1 cut(s) 1816
Aor51HI AGCGCT 1 cut(s) 999
AoxI GGCC 5 cut(s) 938, 1135, 1518, 1583, 1766
ApeKI GCWGC 2 cut(s) 47, 1753
ApoI RAATTY 3 cut(s) 609, 1109, 1153
AseI ATTAAT 1 cut(s) 567
Asp700I GAANNNNTTC 1 cut(s) 759
AspA2I CCTAGG 1 cut(s) 785
AspLEI GCGC 1 cut(s) 1000
AspS9I GGNCC 3 cut(s) 938, 1518, 1601
AsuC2I CCSGG 1 cut(s) 1496
AsuHPI GGTGA 7 cut(s) 58, 502, 1034, 1139, 1202, 1273, 1814
AsuNHI GCTAGC 2 cut(s) 859, 1370
AvaI CYCGRG 2 cut(s) 167, 929
AvaII GGWCC 1 cut(s) 1601
AvrII CCTAGG 1 cut(s) 785
BaeGI GKGCMC 1 cut(s) 1441
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 2 cut(s) 369, 930
BarI GAAGNNNNNNTAC 2 cut(s) 659, 691
BauI CACGAG 1 cut(s) 1525
BbsI GAAGAC 2 cut(s) 229, 1411
Bbv12I GWGCWC 4 cut(s) 369, 930, 1532, 1745
BbvI GCAGC 2 cut(s) 59, 1765
BccI CCATC 3 cut(s) 122, 542, 832
BciT130I CCWGG 2 cut(s) 1391, 1765
BciVI GTATCC 1 cut(s) 458
BcnI CCSGG 1 cut(s) 1496
BcoDI GTCTC 3 cut(s) 264, 789, 1586
BfaI CTAG 5 cut(s) 786, 860, 1371, 1385, 1664
BfmI CTRYAG 1 cut(s) 1030
BfoI RGCGCY 1 cut(s) 1001
BfuI GTATCC 1 cut(s) 458
BisI GCNGC 2 cut(s) 48, 1754
BlnI CCTAGG 1 cut(s) 785
BlsI GCNGC 2 cut(s) 49, 1755
BmcAI AGTACT 1 cut(s) 33
Bme1390I CCNGG 3 cut(s) 1391, 1496, 1765
Bme18I GGWCC 1 cut(s) 1601
BmeT110I CYCGRG 2 cut(s) 167, 929
BmgBI CACGTC 1 cut(s) 1537
BmgT120I GGNCC 3 cut(s) 938, 1518, 1601
BmiI GGNNCC 4 cut(s) 325, 491, 582, 1142
BmrFI CCNGG 3 cut(s) 1391, 1496, 1765
BmrI ACTGGG 2 cut(s) 638, 1418
BmsI GCATC 2 cut(s) 692, 1776
BmtI GCTAGC 2 cut(s) 863, 1374
BmuI ACTGGG 2 cut(s) 638, 1418
BpiI GAAGAC 2 cut(s) 229, 1411
BpmI CTGGAG 3 cut(s) 673, 745, 1294
BpuEI CTTGAG 1 cut(s) 735
BpuMI CCSGG 1 cut(s) 1496
Bsa29I ATCGAT 1 cut(s) 402
BsaBI GATNNNNATC 2 cut(s) 408, 425
BsaI GGTCTC 1 cut(s) 264
BsaJI CCNNGG 6 cut(s) 274, 485, 785, 1132, 1441, 1494
BsaWI WCCGGW 3 cut(s) 200, 1149, 1816
BsaXI ACNNNNNCTCC 4 cut(s) 108, 138, 917, 947
Bsc4I CCNNNNNNNGG 4 cut(s) 333, 791, 981, 1258
Bse118I RCCGGY 1 cut(s) 1137
Bse1I ACTGG 6 cut(s) 173, 304, 513, 644, 1277, 1413
Bse3DI GCAATG 2 cut(s) 1062, 1381
Bse8I GATNNNNATC 2 cut(s) 408, 425
BseAI TCCGGA 1 cut(s) 1816
BseBI CCWGG 2 cut(s) 1391, 1765
BseCI ATCGAT 1 cut(s) 402
BseDI CCNNGG 6 cut(s) 274, 485, 785, 1132, 1441, 1494
BseGI GGATG 3 cut(s) 197, 309, 683
BseJI GATNNNNATC 2 cut(s) 408, 425
BseLI CCNNNNNNNGG 4 cut(s) 333, 791, 981, 1258
BseMI GCAATG 2 cut(s) 1062, 1381
BseMII CTCAG 2 cut(s) 280, 708
BseNI ACTGG 6 cut(s) 173, 304, 513, 644, 1277, 1413
BseRI GAGGAG 2 cut(s) 1346, 1622
BseSI GKGCMC 1 cut(s) 1441
BseXI GCAGC 2 cut(s) 59, 1765
BseYI CCCAGC 1 cut(s) 1046
BshFI GGCC 5 cut(s) 940, 1137, 1520, 1585, 1768
BshNI GGYRCC 1 cut(s) 489
BshVI ATCGAT 1 cut(s) 402
BsiHKAI GWGCWC 4 cut(s) 369, 930, 1532, 1745
BsiHKCI CYCGRG 2 cut(s) 167, 929
BsiSI CCGG 6 cut(s) 201, 556, 1138, 1150, 1496, 1817
BslI CCNNNNNNNGG 4 cut(s) 333, 791, 981, 1258
BsmAI GTCTC 3 cut(s) 264, 789, 1586
BsnI GGCC 5 cut(s) 940, 1137, 1520, 1585, 1768
Bso31I GGTCTC 1 cut(s) 264
BsoBI CYCGRG 2 cut(s) 167, 929
Bsp1286I GDGCHC 5 cut(s) 369, 930, 1441, 1532, 1745
Bsp13I TCCGGA 1 cut(s) 1816
Bsp143I GATC 4 cut(s) 145, 248, 420, 1675
Bsp19I CCATGG 2 cut(s) 274, 1441
BspACI CCGC 2 cut(s) 114, 681
BspANI GGCC 5 cut(s) 940, 1137, 1520, 1585, 1768
BspCNI CTCAG 2 cut(s) 279, 707
BspDI ATCGAT 1 cut(s) 402
BspEI TCCGGA 1 cut(s) 1816
BspHI TCATGA 2 cut(s) 885, 1327
BspLI GGNNCC 4 cut(s) 325, 491, 582, 1142
BspOI GCTAGC 2 cut(s) 863, 1374
BspPI GGATC 1 cut(s) 428
BspQI GCTCTTC 1 cut(s) 1818
BspT107I GGYRCC 1 cut(s) 489
BspTNI GGTCTC 1 cut(s) 264
BsrBI CCGCTC 1 cut(s) 114
BsrDI GCAATG 2 cut(s) 1062, 1381
BsrFI RCCGGY 1 cut(s) 1137
BsrI ACTGG 6 cut(s) 173, 304, 513, 644, 1277, 1413
BssAI RCCGGY 1 cut(s) 1137
BssECI CCNNGG 6 cut(s) 274, 485, 785, 1132, 1441, 1494
BssMI GATC 4 cut(s) 145, 248, 420, 1675
BssSI CACGAG 1 cut(s) 1525
BssT1I CCWWGG 5 cut(s) 274, 485, 785, 1132, 1441
Bst2BI CACGAG 1 cut(s) 1525
Bst2UI CCWGG 2 cut(s) 1391, 1765
Bst4CI ACNGT 1 cut(s) 532
Bst6I CTCTTC 2 cut(s) 1067, 1818
BstC8I GCNNGC 8 cut(s) 861, 1139, 1181, 1372, 1503, 1731, 1758, 1775
BstDEI CTNAG 3 cut(s) 266, 694, 1053
BstDSI CCRYGG 2 cut(s) 274, 1441
BstENI CCTNNNNNAGG 1 cut(s) 789
BstF5I GGATG 3 cut(s) 197, 309, 683
BstH2I RGCGCY 1 cut(s) 1001
BstHHI GCGC 1 cut(s) 1000
BstKTI GATC 4 cut(s) 148, 251, 423, 1678
BstMAI GTCTC 3 cut(s) 264, 789, 1586
BstMBI GATC 4 cut(s) 145, 248, 420, 1675
BstMWI GCNNNNNNNGC 2 cut(s) 1550, 1774
BstNI CCWGG 2 cut(s) 1391, 1765
BstNSI RCATGY 2 cut(s) 1505, 1777
BstSCI CCNGG 3 cut(s) 1389, 1494, 1763
BstSFI CTRYAG 1 cut(s) 1030
BstSLI GKGCMC 1 cut(s) 1441
BstV1I GCAGC 2 cut(s) 59, 1765
BstV2I GAAGAC 2 cut(s) 229, 1411
Bsu15I ATCGAT 1 cut(s) 402
BsuI GTATCC 1 cut(s) 458
BsuRI GGCC 5 cut(s) 940, 1137, 1520, 1585, 1768
BsuTUI ATCGAT 1 cut(s) 402
BtgI CCRYGG 2 cut(s) 274, 1441
BtrI CACGTC 1 cut(s) 1537
BtsCI GGATG 3 cut(s) 197, 309, 683
BtsI GCAGTG 1 cut(s) 767
BtsIMutI CAGTG 4 cut(s) 325, 520, 767, 1907
Cac8I GCNNGC 8 cut(s) 861, 1139, 1181, 1372, 1503, 1731, 1758, 1775
CciI TCATGA 2 cut(s) 885, 1327
CfoI GCGC 1 cut(s) 1000
Cfr10I RCCGGY 1 cut(s) 1137
Cfr13I GGNCC 3 cut(s) 938, 1518, 1601
ClaI ATCGAT 1 cut(s) 402
Csp6I GTAC 6 cut(s) 32, 307, 901, 1160, 1240, 1476
CviQI GTAC 6 cut(s) 32, 307, 901, 1160, 1240, 1476
DdeI CTNAG 3 cut(s) 266, 694, 1053
DpnI GATC 4 cut(s) 147, 250, 422, 1677
DpnII GATC 4 cut(s) 145, 248, 420, 1675
DraI TTTAAA 2 cut(s) 952, 1288
EaeI YGGCCR 1 cut(s) 1135
Eam1104I CTCTTC 2 cut(s) 1067, 1818
EarI CTCTTC 2 cut(s) 1067, 1818
Ecl136II GAGCTC 2 cut(s) 367, 928
Eco130I CCWWGG 5 cut(s) 274, 485, 785, 1132, 1441
Eco24I GRGCYC 2 cut(s) 369, 930
Eco31I GGTCTC 1 cut(s) 264
Eco32I GATATC 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 1601
Eco47III AGCGCT 1 cut(s) 999
Eco53kI GAGCTC 2 cut(s) 367, 928
Eco57I CTGAAG 3 cut(s) 72, 1293, 1745
Eco88I CYCGRG 2 cut(s) 167, 929
EcoICRI GAGCTC 2 cut(s) 367, 928
EcoNI CCTNNNNNAGG 1 cut(s) 789
EcoRII CCWGG 2 cut(s) 1389, 1763
EcoRV GATATC 1 cut(s) 157
EcoT14I CCWWGG 5 cut(s) 274, 485, 785, 1132, 1441
EcoT38I GRGCYC 2 cut(s) 369, 930
ErhI CCWWGG 5 cut(s) 274, 485, 785, 1132, 1441
FauNDI CATATG 1 cut(s) 1909
FblI GTMKAC 1 cut(s) 1922
Fnu4HI GCNGC 2 cut(s) 48, 1754
FokI GGATG 3 cut(s) 184, 296, 670
FriOI GRGCYC 2 cut(s) 369, 930
Fsp4HI GCNGC 2 cut(s) 48, 1754
FspBI CTAG 5 cut(s) 786, 860, 1371, 1385, 1664
GlaI GCGC 1 cut(s) 999
GluI GCNGC 2 cut(s) 48, 1754
GsaI CCCAGC 1 cut(s) 1050
GsuI CTGGAG 3 cut(s) 673, 745, 1294
HaeII RGCGCY 1 cut(s) 1001
HaeIII GGCC 5 cut(s) 940, 1137, 1520, 1585, 1768
HapII CCGG 6 cut(s) 201, 556, 1138, 1150, 1496, 1817
HhaI GCGC 1 cut(s) 1000
Hin6I GCGC 1 cut(s) 998
HinP1I GCGC 1 cut(s) 998
HincII GTYRAC 2 cut(s) 475, 1923
HindII GTYRAC 2 cut(s) 475, 1923
HindIII AAGCTT 3 cut(s) 11, 1055, 1727
HpaI GTTAAC 1 cut(s) 475
HpaII CCGG 6 cut(s) 201, 556, 1138, 1150, 1496, 1817
HphI GGTGA 7 cut(s) 58, 502, 1034, 1139, 1202, 1273, 1814
Hpy166II GTNNAC 4 cut(s) 475, 1193, 1478, 1923
Hpy188III TCNNGA 8 cut(s) 299, 752, 886, 1092, 1328, 1664, 1817, 1916
Hpy8I GTNNAC 4 cut(s) 475, 1193, 1478, 1923
HpyCH4III ACNGT 1 cut(s) 532
HpyCH4IV ACGT 2 cut(s) 471, 1536
HpyCH4V TGCA 6 cut(s) 1118, 1179, 1427, 1505, 1733, 1789
HpyF10VI GCNNNNNNNGC 2 cut(s) 1550, 1774
HpyF3I CTNAG 3 cut(s) 266, 694, 1053
HpySE526I ACGT 2 cut(s) 471, 1536
HspAI GCGC 1 cut(s) 998
Kpn2I TCCGGA 1 cut(s) 1816
KroI GCCGGC 1 cut(s) 1137
KroNI GCCGGC 1 cut(s) 1139
KspAI GTTAAC 1 cut(s) 475
Kzo9I GATC 4 cut(s) 145, 248, 420, 1675
LguI GCTCTTC 1 cut(s) 1818
LmnI GCTCC 8 cut(s) 111, 329, 364, 586, 726, 925, 1146, 1498
Lsp1109I GCAGC 2 cut(s) 59, 1765
LweI GCATC 2 cut(s) 692, 1776
MaeI CTAG 5 cut(s) 786, 860, 1371, 1385, 1664
MaeII ACGT 2 cut(s) 471, 1536
MaeIII GTNAC 6 cut(s) 88, 175, 1145, 1261, 1688, 1824
MalI GATC 4 cut(s) 147, 250, 422, 1677
MbiI CCGCTC 1 cut(s) 114
MboI GATC 4 cut(s) 145, 248, 420, 1675
MfeI CAATTG 1 cut(s) 585
MhlI GDGCHC 5 cut(s) 369, 930, 1441, 1532, 1745
MmeI TCCRAC 2 cut(s) 351, 1625
MroI TCCGGA 1 cut(s) 1816
MroNI GCCGGC 1 cut(s) 1137
MroXI GAANNNNTTC 1 cut(s) 759
MseI TTAA 5 cut(s) 474, 567, 654, 951, 1287
MslI CAYNNNNRTG 5 cut(s) 402, 1067, 1359, 1535, 1738
MspA1I CMGCKG 1 cut(s) 50
MspI CCGG 6 cut(s) 201, 556, 1138, 1150, 1496, 1817
MspR9I CCNGG 3 cut(s) 1391, 1496, 1765
MunI CAATTG 1 cut(s) 585
MvaI CCWGG 2 cut(s) 1391, 1765
MwoI GCNNNNNNNGC 2 cut(s) 1550, 1774
NaeI GCCGGC 1 cut(s) 1139
NciI CCSGG 1 cut(s) 1496
NcoI CCATGG 2 cut(s) 274, 1441
NdeI CATATG 1 cut(s) 1909
NdeII GATC 4 cut(s) 145, 248, 420, 1675
NgoMIV GCCGGC 1 cut(s) 1137
NheI GCTAGC 2 cut(s) 859, 1370
NlaIV GGNNCC 4 cut(s) 325, 491, 582, 1142
NmuCI GTSAC 3 cut(s) 1145, 1261, 1824
NspI RCATGY 2 cut(s) 1505, 1777
OliI CACNNNNGTG 1 cut(s) 1535
PaeI GCATGC 2 cut(s) 1505, 1777
PaeR7I CTCGAG 1 cut(s) 929
PagI TCATGA 2 cut(s) 885, 1327
PciSI GCTCTTC 1 cut(s) 1818
PcsI WCGNNNNNNNCGW 1 cut(s) 477
PdiI GCCGGC 1 cut(s) 1139
PdmI GAANNNNTTC 1 cut(s) 759
PfeI GAWTC 4 cut(s) 376, 389, 435, 739
PkrI GCNGC 2 cut(s) 49, 1755
PshBI ATTAAT 1 cut(s) 567
Psp124BI GAGCTC 2 cut(s) 369, 930
Psp6I CCWGG 2 cut(s) 1389, 1763
PspFI CCCAGC 1 cut(s) 1046
PspGI CCWGG 2 cut(s) 1389, 1763
PspN4I GGNNCC 4 cut(s) 325, 491, 582, 1142
PspPI GGNCC 3 cut(s) 938, 1518, 1601
PspXI VCTCGAGB 1 cut(s) 929
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 6 cut(s) 33, 308, 902, 1161, 1241, 1477
RsaNI GTAC 6 cut(s) 32, 307, 901, 1160, 1240, 1476
RseI CAYNNNNRTG 5 cut(s) 402, 1067, 1359, 1535, 1738
SacI GAGCTC 2 cut(s) 369, 930
SalI GTCGAC 1 cut(s) 1921
SapI GCTCTTC 1 cut(s) 1818
SaqAI TTAA 5 cut(s) 474, 567, 654, 951, 1287
SatI GCNGC 2 cut(s) 48, 1754
Sau3AI GATC 4 cut(s) 145, 248, 420, 1675
Sau96I GGNCC 3 cut(s) 938, 1518, 1601
ScaI AGTACT 1 cut(s) 33
ScrFI CCNGG 3 cut(s) 1391, 1496, 1765
SduI GDGCHC 5 cut(s) 369, 930, 1441, 1532, 1745
SfaNI GCATC 2 cut(s) 692, 1776
SfcI CTRYAG 1 cut(s) 1030
Sfr274I CTCGAG 1 cut(s) 929
SinI GGWCC 1 cut(s) 1601
SlaI CTCGAG 1 cut(s) 929
SmiMI CAYNNNNRTG 5 cut(s) 402, 1067, 1359, 1535, 1738
SmlI CTYRAG 2 cut(s) 750, 929
SmoI CTYRAG 2 cut(s) 750, 929
SphI GCATGC 2 cut(s) 1505, 1777
SsiI CCGC 2 cut(s) 114, 681
SspI AATATT 1 cut(s) 1660
SspMI CTAG 5 cut(s) 786, 860, 1371, 1385, 1664
SstI GAGCTC 2 cut(s) 369, 930
StyD4I CCNGG 3 cut(s) 1389, 1494, 1763
StyI CCWWGG 5 cut(s) 274, 485, 785, 1132, 1441
TaaI ACNGT 1 cut(s) 532
TaiI ACGT 2 cut(s) 474, 1539
TatI WGTACW 3 cut(s) 31, 306, 1159
TfiI GAWTC 4 cut(s) 376, 389, 435, 739
Tru1I TTAA 5 cut(s) 474, 567, 654, 951, 1287
Tru9I TTAA 5 cut(s) 474, 567, 654, 951, 1287
TscAI CASTG 4 cut(s) 325, 520, 774, 1907
TseFI GTSAC 3 cut(s) 1145, 1261, 1824
TseI GCWGC 2 cut(s) 47, 1753
Tsp45I GTSAC 3 cut(s) 1145, 1261, 1824
TspDTI ATGAA 5 cut(s) 752, 1118, 1316, 1884, 1896
TspGWI ACGGA 1 cut(s) 1133
TspRI CASTG 4 cut(s) 325, 520, 774, 1907
VpaK11BI GGWCC 1 cut(s) 1601
VspI ATTAAT 1 cut(s) 567
XagI CCTNNNNNAGG 1 cut(s) 789
XapI RAATTY 3 cut(s) 609, 1109, 1153
XbaI TCTAGA 1 cut(s) 1663
XceI RCATGY 2 cut(s) 1505, 1777
XcmI CCANNNNNNNNNTGG 2 cut(s) 531, 1397
XhoI CTCGAG 1 cut(s) 929
XmaJI CCTAGG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 1922
XmnI GAANNNNTTC 1 cut(s) 759
XspI CTAG 5 cut(s) 786, 860, 1371, 1385, 1664
ZrmI AGTACT 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.