MD12G1147500.v1.1

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
Physical Location & Seq
Reverse (-)
22639959 .. 22641995
2037 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1147500.v1.1.491

Sequence Viewer

Length: 2037 bp
ATGTTTGGCAGAGAAACAAGAAAAATAGCCATGCTTTTGAAGCTTGTAATACTCACACTAGTAACCCTAGCAGCAGCTGAAGATCTTAACTTCACCTTCAATGGCTTCCAGTCTGCCAATCTTTACCTCGACGGCATAGCGGAAGTCACACCAAATGGCCTTTTGAGGCTTACAAACGAGACTAAGCAGAACCAAGGCCATGGATTTTATCCCAACTCCATAACCTTCAAGAACTCATCCAACGGCACGGTTTTCTCCTTCTCAACAACTTTTGTGTTCGCCATCAGATCAGAATATGCAGATTTGAGCGGTCATGGAATCGCTTTCGTGGTTGCTCCAACGCAAGGCCTTCCCGGCGCTCTTCCAAGCCAATACCTCGGCCTTTTCAACGAGTCCAACACTGGAAATGATACCAATCATGTTTTTGCCGTGGAGCTCGACACCATCCAGGGCAAGGAATTCAATGACATCAATGACAACCATGTTGGGATTGATATCAACGGCTTGCACTCTAAGAAAGCTGCGTCAGCTGCATACTATGATTCAAATAATGGCAGGTTTCGGAATTTAACTCTCATCAGCGGTCAACCGATGAAAGTTTGGGTGGAATATGATGGCGCCAAGAAGCAAATCGATGTCACTTTGGCTCCAATCAATGTTGATAAACCCTACACTCCACTTTTGTCTTTGAATCTCGATCTTTCGCTGATACTCAACGAAACAATGCATGTCGGCTTCTCTTCATCCACCGGCTCAGTCCTCACATCTCATTATGTGTTGGGTTGGAGCTTCAAAATCAATGGCCAGGCTCAAGAACTTCTTGTGTCAAAACTTCCTAAGTTGCCGCAAATAAGAGGTAAAAAGAGGTTGAAACTTTTGACAATTGGCGTGCCTATTTTATCTGTGAGTTTGATTTTTCTGGCAGTTTACGGTTTAATTTACGTCATAAGAAGGAAGGGGATGTTTGCAGAATTGCTCGAAGATTGGGAGCTTGAGTATGGCCCTCAAAGGTTTAAGTACAAAGAGTTGTACATTGCAACAAAAGGGTTTAAAGAAAAGGAGCTTTTGGGAAGTGGGGGTTTTGGTAAAGTGTATAGAGGCATATTACCCACCACAAAAACTGAGATTGCTGTGAAGAGAGTCTCACATGAGTCAAGGCAGGGGATGAAGGAGTTTGTGGCGGAAATTGTGAGCATTGGCCGCCTTCGCCATCGGAATTTAGTCCCACTCTTGGGATACTGCAGAAGAAAAGGGGAGCTGCTTTTGGTGTATGACTACATGCCTAATGGAAGCTTGGACAAGTACCTCCATGACCAACCGGCGGTCACTCTCAATTGGAGCCAGAGGTTTAGAGTTATCCGAGGCGTTGCTTTGGGGTTGTTCTATCTTCATGAAGGATGGGAACAAGTTGTGATTCACAGAGATGTTAAGGCCAGCAATGTGTTGTTAGATGGTGAATTGAATGCAAGGCTAGGGGATTTTGGGCTTTCAAGACTATATGACCATGGAACAGACCCTCAAACTACTCATGTAGTTGGAACACTCGGGTATTTAGCTCCGGAACATACAAGAACAGGGCGGGCCACAGCGAGCACCGATGTGTTTGCTTTTGGGGCATTTTTGCTCGAAGTTGCTTGTGGAAGAAGGCCGATAGAAGCGCAAGGTCCTGAGCAGGATTTGATCTTGGTGGATTGGGTTTTTTCTTGTTGGAACAGAAGTAATATTCTCGAGGCAAAGGATAAAAACATTGGGACGGATTTTGTAACCGAGGAGGTGGAGTTGGTATTGAAGCTAGGGTTGCTGTGCTCTCACCCGGAGCCTTCGGCTAGGCCGAGCATGCGACGAGTCGTGCAGTATTTGGAGGCGGACATTGCTTTGCCAGAGCTCTCAGTTCTTGGGCTTTCTTCAAGTGGATTGACTTTTGCTTACCCTGAAGGTTTTGATGATTTTGCTATGTTATATTCTTCTTCTGTGGCCAAGGGGCTTTCATCTTCATCGTACGCTGCAGAGTCCGCACTCCTCTCAGGTGGTCGCTGA

Protein Analysis

679

Amino Acids

75.02

Weight (kDa)

6.99

Isoelectric Point (pI)

34.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 29 - 279 1.6e-84 Legume lectin domain
Pkinase PF00069 350 - 618 3.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 352 - 620 5e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 546
AccB1I GGYRCC 1 cut(s) 617
AccBSI CCGCTC 1 cut(s) 309
AccIII TCCGGA 1 cut(s) 1558
AcoI YGGCCR 3 cut(s) 802, 1198, 1974
AcsI RAATTY 3 cut(s) 458, 565, 1216
AcuI CTGAAG 2 cut(s) 99, 1953
AcyI GRCGYC 1 cut(s) 618
AfaI GTAC 4 cut(s) 1019, 1031, 1304, 2000
AfiI CCNNNNNNNGG 5 cut(s) 344, 454, 1231, 1232, 1321
AhlI ACTAGT 1 cut(s) 58
AjnI CCWGG 2 cut(s) 447, 804
AleI CACNNNNGTG 1 cut(s) 1598
Alw21I GWGCWC 4 cut(s) 438, 1595, 1808, 1887
Alw26I GTCTC 2 cut(s) 173, 1147
AlwNI CAGNNNCTG 1 cut(s) 77
Ama87I CYCGRG 2 cut(s) 1544, 1727
Aor13HI TCCGGA 1 cut(s) 1558
ApeKI GCWGC 6 cut(s) 71, 74, 521, 530, 1258, 2003
ApoI RAATTY 3 cut(s) 458, 565, 1216
AspLEI GCGC 3 cut(s) 359, 620, 1660
AspS9I GGNCC 3 cut(s) 1001, 1581, 1664
AsuC2I CCSGG 2 cut(s) 354, 1814
AsuHPI GGTGA 3 cut(s) 85, 1466, 1802
AvaI CYCGRG 2 cut(s) 1544, 1727
AvaII GGWCC 1 cut(s) 1664
BalI TGGCCA 2 cut(s) 804, 1976
BanI GGYRCC 1 cut(s) 617
BanII GRGCYC 2 cut(s) 438, 1887
Bbv12I GWGCWC 4 cut(s) 438, 1595, 1808, 1887
BbvI GCAGC 6 cut(s) 83, 86, 508, 517, 1245, 1990
BccI CCATC 6 cut(s) 290, 452, 608, 1218, 1392, 1445
BceAI ACGGC 4 cut(s) 148, 259, 413, 517
BcgI CGANNNNNNTGC 2 cut(s) 1586, 1620
BciT130I CCWGG 2 cut(s) 449, 806
BciVI GTATCC 1 cut(s) 1229
BcnI CCSGG 2 cut(s) 354, 1814
BcoDI GTCTC 2 cut(s) 173, 1147
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 5 cut(s) 59, 68, 1472, 1793, 1827
BfmI CTRYAG 2 cut(s) 1240, 2004
BfoI RGCGCY 2 cut(s) 360, 621
BfuAI ACCTGC 1 cut(s) 546
BfuI GTATCC 1 cut(s) 1229
BglI GCCNNNNNGGC 1 cut(s) 354
BglII AGATCT 1 cut(s) 82
BisI GCNGC 8 cut(s) 72, 75, 522, 531, 845, 1201, 1259, 2004
BlsI GCNGC 8 cut(s) 73, 76, 523, 532, 846, 1202, 1260, 2005
Bme1390I CCNGG 4 cut(s) 354, 449, 806, 1814
Bme18I GGWCC 1 cut(s) 1664
BmeT110I CYCGRG 2 cut(s) 1544, 1727
BmgT120I GGNCC 3 cut(s) 1001, 1581, 1664
BmiI GGNNCC 4 cut(s) 619, 648, 1340, 1818
BmrFI CCNGG 4 cut(s) 354, 449, 806, 1814
Bpu10I CCTNAGC 1 cut(s) 1668
BpuEI CTTGAG 2 cut(s) 795, 1013
BpuMI CCSGG 2 cut(s) 354, 1814
Bsa29I ATCGAT 1 cut(s) 633
BsaBI GATNNNNATC 2 cut(s) 414, 494
BsaHI GRCGYC 1 cut(s) 618
BsaJI CCNNGG 9 cut(s) 193, 199, 376, 429, 448, 1360, 1504, 1767, 1977
BsaWI WCCGGW 1 cut(s) 1558
BsaXI ACNNNNNCTCC 6 cut(s) 631, 661, 980, 1010, 1763, 1793
Bsc4I CCNNNNNNNGG 5 cut(s) 344, 454, 1231, 1232, 1321
Bse118I RCCGGY 2 cut(s) 749, 1318
Bse1I ACTGG 2 cut(s) 109, 406
Bse3DI GCAATG 3 cut(s) 1032, 1444, 1869
Bse8I GATNNNNATC 2 cut(s) 414, 494
BseAI TCCGGA 1 cut(s) 1558
BseBI CCWGG 2 cut(s) 449, 806
BseCI ATCGAT 1 cut(s) 633
BseDI CCNNGG 9 cut(s) 193, 199, 376, 429, 448, 1360, 1504, 1767, 1977
BseGI GGATG 6 cut(s) 236, 444, 743, 966, 1170, 1403
BseJI GATNNNNATC 2 cut(s) 414, 494
BseLI CCNNNNNNNGG 5 cut(s) 344, 454, 1231, 1232, 1321
BseMI GCAATG 3 cut(s) 1032, 1444, 1869
BseMII CTCAG 5 cut(s) 768, 1113, 1659, 1902, 2037
BseNI ACTGG 2 cut(s) 109, 406
BseRI GAGGAG 2 cut(s) 1784, 2009
BseXI GCAGC 6 cut(s) 83, 86, 508, 517, 1245, 1990
BsgI GTGCAG 1 cut(s) 1871
BshNI GGYRCC 1 cut(s) 617
BshVI ATCGAT 1 cut(s) 633
BsiHKAI GWGCWC 4 cut(s) 438, 1595, 1808, 1887
BsiHKCI CYCGRG 2 cut(s) 1544, 1727
BsiSI CCGG 5 cut(s) 354, 750, 1319, 1559, 1814
BsiWI CGTACG 1 cut(s) 1998
BslFI GGGAC 2 cut(s) 1208, 1765
BslI CCNNNNNNNGG 5 cut(s) 344, 454, 1231, 1232, 1321
BsmAI GTCTC 2 cut(s) 173, 1147
BsmFI GGGAC 2 cut(s) 1208, 1765
BsmI GAATGC 1 cut(s) 1468
BsoBI CYCGRG 2 cut(s) 1544, 1727
Bsp1286I GDGCHC 4 cut(s) 438, 1595, 1808, 1887
Bsp13I TCCGGA 1 cut(s) 1558
Bsp1407I TGTACA 1 cut(s) 1029
Bsp143I GATC 4 cut(s) 82, 287, 697, 1680
Bsp19I CCATGG 2 cut(s) 199, 1504
BspCNI CTCAG 5 cut(s) 767, 1114, 1660, 1901, 2036
BspDI ATCGAT 1 cut(s) 633
BspEI TCCGGA 1 cut(s) 1558
BspHI TCATGA 1 cut(s) 1390
BspLI GGNNCC 4 cut(s) 619, 648, 1340, 1818
BspMAI CTGCAG 2 cut(s) 1244, 2008
BspMI ACCTGC 1 cut(s) 546
BspQI GCTCTTC 1 cut(s) 366
BspT107I GGYRCC 1 cut(s) 617
BsrBI CCGCTC 1 cut(s) 309
BsrDI GCAATG 3 cut(s) 1032, 1444, 1869
BsrFI RCCGGY 2 cut(s) 749, 1318
BsrGI TGTACA 1 cut(s) 1029
BsrI ACTGG 2 cut(s) 109, 406
BssAI RCCGGY 2 cut(s) 749, 1318
BssECI CCNNGG 9 cut(s) 193, 199, 376, 429, 448, 1360, 1504, 1767, 1977
BssMI GATC 4 cut(s) 82, 287, 697, 1680
BssNI GRCGYC 1 cut(s) 618
BssT1I CCWWGG 4 cut(s) 193, 199, 1504, 1977
Bst2UI CCWGG 2 cut(s) 449, 806
Bst4CI ACNGT 2 cut(s) 250, 932
Bst6I CTCTTC 3 cut(s) 366, 745, 1130
BstACI GRCGYC 1 cut(s) 618
BstAUI TGTACA 1 cut(s) 1029
BstC8I GCNNGC 6 cut(s) 506, 890, 1435, 1581, 1591, 1838
BstDEI CTNAG 8 cut(s) 183, 513, 754, 837, 1122, 1668, 1888, 2023
BstDSI CCRYGG 3 cut(s) 199, 429, 1504
BstF5I GGATG 6 cut(s) 236, 444, 743, 966, 1170, 1403
BstH2I RGCGCY 2 cut(s) 360, 621
BstHHI GCGC 3 cut(s) 359, 620, 1660
BstKTI GATC 4 cut(s) 85, 290, 700, 1683
BstMAI GTCTC 2 cut(s) 173, 1147
BstMBI GATC 4 cut(s) 82, 287, 697, 1680
BstNI CCWGG 2 cut(s) 449, 806
BstNSI RCATGY 3 cut(s) 731, 1282, 1840
BstSCI CCNGG 4 cut(s) 352, 447, 804, 1812
BstSFI CTRYAG 2 cut(s) 1240, 2004
BstV1I GCAGC 6 cut(s) 83, 86, 508, 517, 1245, 1990
BstX2I RGATCY 1 cut(s) 82
BstXI CCANNNNNNTGG 1 cut(s) 200
BstYI RGATCY 1 cut(s) 82
Bsu15I ATCGAT 1 cut(s) 633
BsuI GTATCC 1 cut(s) 1229
BsuTUI ATCGAT 1 cut(s) 633
BtgI CCRYGG 3 cut(s) 199, 429, 1504
BtsCI GGATG 6 cut(s) 236, 444, 743, 966, 1170, 1403
BtsIMutI CAGTG 1 cut(s) 399
BveI ACCTGC 1 cut(s) 546
Cac8I GCNNGC 6 cut(s) 506, 890, 1435, 1581, 1591, 1838
CaiI CAGNNNCTG 1 cut(s) 77
CciI TCATGA 1 cut(s) 1390
CfoI GCGC 3 cut(s) 359, 620, 1660
Cfr10I RCCGGY 2 cut(s) 749, 1318
Cfr13I GGNCC 3 cut(s) 1001, 1581, 1664
ClaI ATCGAT 1 cut(s) 633
CseI GACGC 1 cut(s) 513
Csp6I GTAC 4 cut(s) 1018, 1030, 1303, 1999
CviQI GTAC 4 cut(s) 1018, 1030, 1303, 1999
DdeI CTNAG 8 cut(s) 183, 513, 754, 837, 1122, 1668, 1888, 2023
DinI GGCGCC 1 cut(s) 619
DpnI GATC 4 cut(s) 84, 289, 699, 1682
DpnII GATC 4 cut(s) 82, 287, 697, 1680
DraI TTTAAA 1 cut(s) 1051
EaeI YGGCCR 3 cut(s) 802, 1198, 1974
Eam1104I CTCTTC 3 cut(s) 366, 745, 1130
EarI CTCTTC 3 cut(s) 366, 745, 1130
EciI GGCGGA 2 cut(s) 1196, 1880
Ecl136II GAGCTC 2 cut(s) 436, 1885
Eco130I CCWWGG 4 cut(s) 193, 199, 1504, 1977
Eco147I AGGCCT 1 cut(s) 348
Eco24I GRGCYC 2 cut(s) 438, 1887
Eco32I GATATC 1 cut(s) 496
Eco47I GGWCC 1 cut(s) 1664
Eco53kI GAGCTC 2 cut(s) 436, 1885
Eco57I CTGAAG 2 cut(s) 99, 1953
Eco88I CYCGRG 2 cut(s) 1544, 1727
EcoICRI GAGCTC 2 cut(s) 436, 1885
EcoO109I RGGNCCY 1 cut(s) 1664
EcoRI GAATTC 1 cut(s) 458
EcoRII CCWGG 2 cut(s) 447, 804
EcoRV GATATC 1 cut(s) 496
EcoT14I CCWWGG 4 cut(s) 193, 199, 1504, 1977
EcoT22I ATGCAT 1 cut(s) 729
EcoT38I GRGCYC 2 cut(s) 438, 1887
EgeI GGCGCC 1 cut(s) 619
EheI GGCGCC 1 cut(s) 619
ErhI CCWWGG 4 cut(s) 193, 199, 1504, 1977
FalI AAGNNNNNCTT 2 cut(s) 804, 836
FaqI GGGAC 2 cut(s) 1208, 1765
FauI CCCGC 1 cut(s) 1572
Fnu4HI GCNGC 8 cut(s) 72, 75, 522, 531, 845, 1201, 1259, 2004
FokI GGATG 6 cut(s) 223, 431, 730, 973, 1177, 1410
FriOI GRGCYC 2 cut(s) 438, 1887
Fsp4HI GCNGC 8 cut(s) 72, 75, 522, 531, 845, 1201, 1259, 2004
FspBI CTAG 5 cut(s) 59, 68, 1472, 1793, 1827
GlaI GCGC 3 cut(s) 358, 619, 1659
GluI GCNGC 8 cut(s) 72, 75, 522, 531, 845, 1201, 1259, 2004
HaeII RGCGCY 2 cut(s) 360, 621
HapII CCGG 5 cut(s) 354, 750, 1319, 1559, 1814
HgaI GACGC 1 cut(s) 513
HhaI GCGC 3 cut(s) 359, 620, 1660
Hin1I GRCGYC 1 cut(s) 618
Hin6I GCGC 3 cut(s) 357, 618, 1658
HinP1I GCGC 3 cut(s) 357, 618, 1658
HincII GTYRAC 1 cut(s) 587
HindII GTYRAC 1 cut(s) 587
HindIII AAGCTT 2 cut(s) 41, 1291
HinfI GANTC 9 cut(s) 318, 392, 542, 691, 1140, 1151, 1414, 1845, 2009
HpaII CCGG 5 cut(s) 354, 750, 1319, 1559, 1814
HphI GGTGA 3 cut(s) 85, 1466, 1802
Hpy166II GTNNAC 2 cut(s) 587, 928
Hpy188I TCNGA 5 cut(s) 287, 292, 564, 1215, 1361
Hpy188III TCNNGA 8 cut(s) 229, 695, 812, 1391, 1491, 1559, 1667, 1727
Hpy8I GTNNAC 2 cut(s) 587, 928
Hpy99I CGWCG 2 cut(s) 134, 1845
HpyCH4III ACNGT 2 cut(s) 250, 932
HpyCH4IV ACGT 1 cut(s) 942
HpyF3I CTNAG 8 cut(s) 183, 513, 754, 837, 1122, 1668, 1888, 2023
HpySE526I ACGT 1 cut(s) 942
Hsp92I GRCGYC 1 cut(s) 618
HspAI GCGC 3 cut(s) 357, 618, 1658
KasI GGCGCC 1 cut(s) 617
Kpn2I TCCGGA 1 cut(s) 1558
Kzo9I GATC 4 cut(s) 82, 287, 697, 1680
LguI GCTCTTC 1 cut(s) 366
Lsp1109I GCAGC 6 cut(s) 83, 86, 508, 517, 1245, 1990
MaeI CTAG 5 cut(s) 59, 68, 1472, 1793, 1827
MaeII ACGT 1 cut(s) 942
MaeIII GTNAC 5 cut(s) 61, 145, 637, 1324, 1762
MalI GATC 4 cut(s) 84, 289, 699, 1682
MbiI CCGCTC 1 cut(s) 309
MboI GATC 4 cut(s) 82, 287, 697, 1680
MfeI CAATTG 2 cut(s) 882, 1333
MflI RGATCY 1 cut(s) 82
MhlI GDGCHC 4 cut(s) 438, 1595, 1808, 1887
MlsI TGGCCA 2 cut(s) 804, 1976
MluCI AATT 9 cut(s) 458, 565, 882, 936, 971, 1185, 1216, 1333, 1457
MluNI TGGCCA 2 cut(s) 804, 1976
Mly113I GGCGCC 1 cut(s) 618
MlyI GAGTC 5 cut(s) 401, 1149, 1160, 1854, 2018
MmeI TCCRAC 6 cut(s) 264, 362, 420, 764, 1516, 1688
Mox20I TGGCCA 2 cut(s) 804, 1976
Mph1103I ATGCAT 1 cut(s) 729
MroI TCCGGA 1 cut(s) 1558
MscI TGGCCA 2 cut(s) 804, 1976
MseI TTAA 6 cut(s) 87, 569, 935, 1014, 1050, 1428
MslI CAYNNNNRTG 2 cut(s) 1422, 1598
Msp20I TGGCCA 2 cut(s) 804, 1976
MspA1I CMGCKG 3 cut(s) 77, 530, 582
MspI CCGG 5 cut(s) 354, 750, 1319, 1559, 1814
MspR9I CCNGG 4 cut(s) 354, 449, 806, 1814
MunI CAATTG 2 cut(s) 882, 1333
Mva1269I GAATGC 1 cut(s) 1468
MvaI CCWGG 2 cut(s) 449, 806
NarI GGCGCC 1 cut(s) 618
NciI CCSGG 2 cut(s) 354, 1814
NcoI CCATGG 2 cut(s) 199, 1504
NdeII GATC 4 cut(s) 82, 287, 697, 1680
NlaIV GGNNCC 4 cut(s) 619, 648, 1340, 1818
NmeAIII GCCGAG 2 cut(s) 357, 1857
NmuCI GTSAC 3 cut(s) 145, 637, 1324
NsiI ATGCAT 1 cut(s) 729
NspI RCATGY 3 cut(s) 731, 1282, 1840
OliI CACNNNNGTG 1 cut(s) 1598
PaeI GCATGC 1 cut(s) 1840
PaeR7I CTCGAG 1 cut(s) 1727
PagI TCATGA 1 cut(s) 1390
PceI AGGCCT 1 cut(s) 348
PciSI GCTCTTC 1 cut(s) 366
PcsI WCGNNNNNNNCGW 1 cut(s) 1829
PctI GAATGC 1 cut(s) 1468
PfeI GAWTC 4 cut(s) 318, 542, 691, 1414
Pfl23II CGTACG 1 cut(s) 1998
PkrI GCNGC 8 cut(s) 73, 76, 523, 532, 846, 1202, 1260, 2005
PleI GAGTC 5 cut(s) 400, 1148, 1159, 1853, 2017
PluTI GGCGCC 1 cut(s) 621
PpsI GAGTC 5 cut(s) 400, 1148, 1159, 1853, 2017
PpuMI RGGWCCY 1 cut(s) 1664
Psp124BI GAGCTC 2 cut(s) 438, 1887
Psp5II RGGWCCY 1 cut(s) 1664
Psp6I CCWGG 2 cut(s) 447, 804
PspGI CCWGG 2 cut(s) 447, 804
PspLI CGTACG 1 cut(s) 1998
PspN4I GGNNCC 4 cut(s) 619, 648, 1340, 1818
PspPI GGNCC 3 cut(s) 1001, 1581, 1664
PspPPI RGGWCCY 1 cut(s) 1664
PstI CTGCAG 2 cut(s) 1244, 2008
PstNI CAGNNNCTG 1 cut(s) 77
PsuI RGATCY 1 cut(s) 82
PvuII CAGCTG 2 cut(s) 77, 530
RsaI GTAC 4 cut(s) 1019, 1031, 1304, 2000
RsaNI GTAC 4 cut(s) 1018, 1030, 1303, 1999
RseI CAYNNNNRTG 2 cut(s) 1422, 1598
SacI GAGCTC 2 cut(s) 438, 1887
SapI GCTCTTC 1 cut(s) 366
SaqAI TTAA 6 cut(s) 87, 569, 935, 1014, 1050, 1428
SatI GCNGC 8 cut(s) 72, 75, 522, 531, 845, 1201, 1259, 2004
Sau3AI GATC 4 cut(s) 82, 287, 697, 1680
Sau96I GGNCC 3 cut(s) 1001, 1581, 1664
SchI GAGTC 5 cut(s) 401, 1149, 1160, 1854, 2018
ScrFI CCNGG 4 cut(s) 354, 449, 806, 1814
SduI GDGCHC 4 cut(s) 438, 1595, 1808, 1887
SfcI CTRYAG 2 cut(s) 1240, 2004
SfoI GGCGCC 1 cut(s) 619
Sfr274I CTCGAG 1 cut(s) 1727
SinI GGWCC 1 cut(s) 1664
SlaI CTCGAG 1 cut(s) 1727
SmiMI CAYNNNNRTG 2 cut(s) 1422, 1598
SmlI CTYRAG 3 cut(s) 810, 992, 1727
SmoI CTYRAG 3 cut(s) 810, 992, 1727
SpeI ACTAGT 1 cut(s) 58
SphI GCATGC 1 cut(s) 1840
Sse9I AATT 9 cut(s) 458, 565, 882, 936, 971, 1185, 1216, 1333, 1457
SseBI AGGCCT 1 cut(s) 348
SspDI GGCGCC 1 cut(s) 617
SspI AATATT 1 cut(s) 1723
SspMI CTAG 5 cut(s) 59, 68, 1472, 1793, 1827
SstI GAGCTC 2 cut(s) 438, 1887
StuI AGGCCT 1 cut(s) 348
StyD4I CCNGG 4 cut(s) 352, 447, 804, 1812
StyI CCWWGG 4 cut(s) 193, 199, 1504, 1977
TaaI ACNGT 2 cut(s) 250, 932
TaiI ACGT 1 cut(s) 945
TaqI TCGA 7 cut(s) 129, 438, 633, 696, 978, 1626, 1728
TasI AATT 9 cut(s) 458, 565, 882, 936, 971, 1185, 1216, 1333, 1457
TatI WGTACW 2 cut(s) 1017, 1029
TauI GCSGC 2 cut(s) 847, 1203
TfiI GAWTC 4 cut(s) 318, 542, 691, 1414
Tru1I TTAA 6 cut(s) 87, 569, 935, 1014, 1050, 1428
Tru9I TTAA 6 cut(s) 87, 569, 935, 1014, 1050, 1428
TscAI CASTG 1 cut(s) 406
TseFI GTSAC 3 cut(s) 145, 637, 1324
TseI GCWGC 6 cut(s) 71, 74, 521, 530, 1258, 2003
Tsp45I GTSAC 3 cut(s) 145, 637, 1324
TspDTI ATGAA 7 cut(s) 608, 732, 1181, 1379, 1407, 1977, 1983
TspGWI ACGGA 1 cut(s) 1769
TspRI CASTG 1 cut(s) 406
VpaK11BI GGWCC 1 cut(s) 1664
XapI RAATTY 3 cut(s) 458, 565, 1216
XceI RCATGY 3 cut(s) 731, 1282, 1840
XhoI CTCGAG 1 cut(s) 1727
XspI CTAG 5 cut(s) 59, 68, 1472, 1793, 1827
Zsp2I ATGCAT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.