Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007705.1

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Reverse (-)

79133 .. 81375

Gene Structure 2243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007705.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

atgtttgtcaagcttgtaataattctcgtagtactagtcgtagcagcagctgaagatctcagcttcatctacaatggcttcgagtctggagaaaatatttggcaagatggccccggagggggagtcatggttgatggtttattcaaaataacgggtcataccttctacgccgagccagtaaccttcaaaaatgactcatcatccagttcagaaattttctccttctctaccactttcgtcttcgctatcagatcagaggacccaacagttagcagcggccatggcctcgcctttgttatctctccaactctaggacgtcccggagttcttccaagcaagtacttcggcctcttcaatggctcgaacttggggaatatgaacaatcatgtttttgctgtggagctcgacaccattaagagcacggagttcaatgatatcgataacaaccatattgggatcgacatcaatggattgaactctgtaaagtcagcaacagcaggatactatgttaaggacggaaggtacccaaggaaattgagcctcgtcagtggtaatccaatgaaagtttgggtcgaatatgatggtactcggaagcagattaatgttactttagctccaattagtgttggtaagaaaccccgaattccactcttgtctttaaaatatgacctttccccagttcttaacaaaattatgtatgttggcttctccgcatccaccggctcagtcaatacatgccgttatattttgggctggagctttaggatgaatggccaagctcaagaacttgttccttcacagctacctaaattgcctaggataggagacaagaaactgtctaaacttctgacttatggtgtgcctgtgatggctgtgagtttagttttgctaacgatttgtcttgtggtttttatcataagaaggaagaagtgcgcagaactacttgaagattgggagctggagtatgggcctcaaaggtttaaatacgaagaattgtataaagccactaaaggatttggaaaggaactgctcttgggtgttgggggatttggtgaggtctatagaggtatcttacccacctctaagattgagatcgctgtgaagagggttttgcataaatcaagacagggaatgaaggaatttgtagcagaaattgttagccttggccggcttcgtcaccggaatttagtacaactcttgggctattgcaggtatggtgtgacatttcggcgaaatggtgaactacttttggtgtatgactacatgcctaatggtagcttggaaaagtacctctacaaccaaccgaagattactctaaactggagtcagaggtttagagtaatcaaaggtgtggcttcaggattgttttatcttcatgaagggtgggaacaagtagtaattcacagagatgtgaaggctagcaatgtgctactagaccaggaattgaatggaagactgggagattttggacttgcaagattatgtgcccatgggacagaccctcaagctactcatgtagctggcacacttgggtatttagccccggagcatgcaagaactggtcgggtcaccatgagcacagatgtgtttgcttacgggatatttttgctcgaagttgcctgtggaagaaggccgatagagacacaaagaccggaggaggatatcgttctggttgatcgggttttttcgtgttggaatagaggtaatattctagaggcaagagatcaaaacttgggtaacgattttgtagttgaggaagtggaattggtgttgaagcttgcattgttgtgcactcgtttgcagcctgcagccaggccaagcatgcgagaagtgatgcagtatttggaaggtgatattgatctcccggatttgtcatttcttcggccctctttgagtggtttagcatttgcgcatgatgaaggttcagatgatgttgaaatggcgtatcagtgttcatatgttccagagtcgaccctcctctccggtggtcgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

664

Amino Acids

73.95

Weight (kDa)

7.94

Isoelectric Point (pI)

36.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	319
Acc16I	TGCGCA	2 cut(s)	934, 1911
Acc36I	ACCTGC	1 cut(s)	1200
Acc65I	GGTACC	1 cut(s)	522
AccB1I	GGYRCC	1 cut(s)	522
AccI	GTMKAC	1 cut(s)	1970
AciI	CCGC	2 cut(s)	276, 711
AclWI	GGATC	1 cut(s)	464
AcoI	YGGCCR	3 cut(s)	277, 772, 1165
AcsI	RAATTY	4 cut(s)	213, 642, 1139, 1183
AcuI	CTGAAG	2 cut(s)	72, 1341
AcyI	GRCGYC	1 cut(s)	316
AfaI	GTAC	6 cut(s)	33, 341, 524, 586, 1191, 1289
AfiI	CCNNNNNNNGG	4 cut(s)	118, 119, 311, 821
AgsI	TTSAA	9 cut(s)	145, 187, 355, 430, 475, 947, 1447, 1774, 1937
AhlI	ACTAGT	1 cut(s)	34
AjnI	CCWGG	2 cut(s)	1437, 1811
AleI	CACNNNNGTG	1 cut(s)	1583
Alw21I	GWGCWC	4 cut(s)	405, 422, 1580, 1793
Alw26I	GTCTC	2 cut(s)	819, 1634
Alw44I	GTGCAC	1 cut(s)	1789
AlwI	GGATC	1 cut(s)	464
AlwNI	CAGNNNCTG	1 cut(s)	50
ApaLI	GTGCAC	1 cut(s)	1789
ApeKI	GCWGC	5 cut(s)	44, 47, 273, 1801, 1808
ApoI	RAATTY	4 cut(s)	213, 642, 1139, 1183
AseI	ATTAAT	1 cut(s)	600
Asp700I	GAANNNNTTC	1 cut(s)	789
Asp718I	GGTACC	1 cut(s)	522
AspA2I	CCTAGG	1 cut(s)	815
AspLEI	GCGC	2 cut(s)	935, 1912
AspS9I	GGNCC	4 cut(s)	110, 259, 968, 1884
AsuC2I	CCSGG	4 cut(s)	114, 321, 1544, 1865
AsuHPI	GGTGA	5 cut(s)	1064, 1169, 1250, 1561, 1862
AsuNHI	GCTAGC	1 cut(s)	1418
AvaII	GGWCC	1 cut(s)	259
AvrII	CCTAGG	1 cut(s)	815
BaeGI	GKGCMC	2 cut(s)	1489, 1793
BalI	TGGCCA	1 cut(s)	774
BanI	GGYRCC	1 cut(s)	522
BanII	GRGCYC	1 cut(s)	405
BarI	GAAGNNNNNNTAC	2 cut(s)	689, 721
BbsI	GAAGAC	2 cut(s)	232, 1459
Bbv12I	GWGCWC	4 cut(s)	405, 422, 1580, 1793
BbvI	GCAGC	5 cut(s)	56, 59, 285, 1813, 1820
BccI	CCATC	4 cut(s)	101, 128, 575, 862
BceAI	ACGGC	1 cut(s)	723
BcgI	CGANNNNNNTGC	2 cut(s)	325, 359
BciT130I	CCWGG	2 cut(s)	1439, 1813
BciVI	GTATCC	1 cut(s)	494
BcnI	CCSGG	4 cut(s)	114, 321, 1544, 1865
BcoDI	GTCTC	2 cut(s)	819, 1634
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	6 cut(s)	35, 311, 816, 1419, 1433, 1712
BfmI	CTRYAG	2 cut(s)	1060, 1806
BfuAI	ACCTGC	1 cut(s)	1200
BfuI	GTATCC	1 cut(s)	494
BglII	AGATCT	1 cut(s)	55
BisI	GCNGC	6 cut(s)	45, 48, 274, 277, 1802, 1809
BlnI	CCTAGG	1 cut(s)	815
BlsI	GCNGC	6 cut(s)	46, 49, 275, 278, 1803, 1810
BmcAI	AGTACT	2 cut(s)	33, 341
Bme1390I	CCNGG	6 cut(s)	114, 321, 1439, 1544, 1813, 1865
Bme18I	GGWCC	1 cut(s)	259
BmgT120I	GGNCC	4 cut(s)	110, 259, 968, 1884
BmiI	GGNNCC	3 cut(s)	112, 261, 524
BmrFI	CCNGG	6 cut(s)	114, 321, 1439, 1544, 1813, 1865
BmrI	ACTGGG	2 cut(s)	671, 1466
BmsI	GCATC	2 cut(s)	722, 1824
BmtI	GCTAGC	1 cut(s)	1422
BmuI	ACTGGG	2 cut(s)	671, 1466
BpiI	GAAGAC	2 cut(s)	232, 1459
BpmI	CTGGAG	4 cut(s)	108, 775, 980, 1342
BpuEI	CTTGAG	2 cut(s)	765, 1488
BpuMI	CCSGG	4 cut(s)	114, 321, 1544, 1865
Bsa29I	ATCGAT	1 cut(s)	438
BsaBI	GATNNNNATC	3 cut(s)	461, 1091, 1857
BsaHI	GRCGYC	1 cut(s)	316
BsaJI	CCNNGG	7 cut(s)	112, 280, 527, 815, 1162, 1489, 1542
BsaWI	WCCGGW	3 cut(s)	1179, 1651, 1982
BsaXI	ACNNNNNCTCC	8 cut(s)	108, 114, 138, 144, 598, 628, 947, 977
Bsc4I	CCNNNNNNNGG	4 cut(s)	118, 119, 311, 821
Bse118I	RCCGGY	2 cut(s)	719, 1167
Bse1I	ACTGG	6 cut(s)	176, 204, 677, 1325, 1461, 1564
Bse3DI	GCAATG	1 cut(s)	1429
Bse8I	GATNNNNATC	3 cut(s)	461, 1091, 1857
BseBI	CCWGG	2 cut(s)	1439, 1813
BseCI	ATCGAT	1 cut(s)	438
BseDI	CCNNGG	7 cut(s)	112, 280, 527, 815, 1162, 1489, 1542
BseGI	GGATG	3 cut(s)	200, 713, 771
BseJI	GATNNNNATC	3 cut(s)	461, 1091, 1857
BseLI	CCNNNNNNNGG	4 cut(s)	118, 119, 311, 821
BseMI	GCAATG	1 cut(s)	1429
BseMII	CTCAG	2 cut(s)	73, 738
BseNI	ACTGG	6 cut(s)	176, 204, 677, 1325, 1461, 1564
BseRI	GAGGAG	2 cut(s)	1670, 1967
BseSI	GKGCMC	2 cut(s)	1489, 1793
BseXI	GCAGC	5 cut(s)	56, 59, 285, 1813, 1820
BshNI	GGYRCC	1 cut(s)	522
BshVI	ATCGAT	1 cut(s)	438
BsiHKAI	GWGCWC	4 cut(s)	405, 422, 1580, 1793
BsiSI	CCGG	9 cut(s)	114, 321, 720, 1168, 1180, 1544, 1652, 1865, 1983
BslFI	GGGAC	2 cut(s)	303, 1507
BslI	CCNNNNNNNGG	4 cut(s)	118, 119, 311, 821
BsmAI	GTCTC	2 cut(s)	819, 1634
BsmFI	GGGAC	2 cut(s)	303, 1507
Bsp1286I	GDGCHC	5 cut(s)	405, 422, 1489, 1580, 1793
Bsp143I	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
Bsp19I	CCATGG	2 cut(s)	280, 1489
BspACI	CCGC	2 cut(s)	276, 711
BspCNI	CTCAG	2 cut(s)	72, 737
BspDI	ATCGAT	1 cut(s)	438
BspHI	TCATGA	1 cut(s)	1375
BspLI	GGNNCC	3 cut(s)	112, 261, 524
BspMAI	CTGCAG	1 cut(s)	1810
BspMI	ACCTGC	1 cut(s)	1200
BspOI	GCTAGC	1 cut(s)	1422
BspPI	GGATC	1 cut(s)	464
BspT107I	GGYRCC	1 cut(s)	522
BsrDI	GCAATG	1 cut(s)	1429
BsrFI	RCCGGY	2 cut(s)	719, 1167
BsrI	ACTGG	6 cut(s)	176, 204, 677, 1325, 1461, 1564
BssAI	RCCGGY	2 cut(s)	719, 1167
BssECI	CCNNGG	7 cut(s)	112, 280, 527, 815, 1162, 1489, 1542
BssMI	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
BssNI	GRCGYC	1 cut(s)	316
BssT1I	CCWWGG	5 cut(s)	280, 527, 815, 1162, 1489
Bst2UI	CCWGG	2 cut(s)	1439, 1813
Bst4CI	ACNGT	2 cut(s)	268, 837
Bst6I	CTCTTC	2 cut(s)	356, 1097
BstACI	GRCGYC	1 cut(s)	316
BstC8I	GCNNGC	7 cut(s)	1169, 1420, 1522, 1551, 1779, 1806, 1823
BstDEI	CTNAG	3 cut(s)	59, 724, 1083
BstDSI	CCRYGG	2 cut(s)	280, 1489
BstEII	GGTNACC	1 cut(s)	1567
BstENI	CCTNNNNNAGG	1 cut(s)	819
BstF5I	GGATG	3 cut(s)	200, 713, 771
BstHHI	GCGC	2 cut(s)	935, 1912
BstKTI	GATC	7 cut(s)	58, 254, 459, 1095, 1678, 1726, 1861
BstMAI	GTCTC	2 cut(s)	819, 1634
BstMBI	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
BstMWI	GCNNNNNNNGC	2 cut(s)	282, 1822
BstNI	CCWGG	2 cut(s)	1439, 1813
BstNSI	RCATGY	4 cut(s)	738, 1267, 1553, 1825
BstPI	GGTNACC	1 cut(s)	1567
BstSCI	CCNGG	6 cut(s)	112, 319, 1437, 1542, 1811, 1863
BstSFI	CTRYAG	2 cut(s)	1060, 1806
BstSLI	GKGCMC	2 cut(s)	1489, 1793
BstV1I	GCAGC	5 cut(s)	56, 59, 285, 1813, 1820
BstV2I	GAAGAC	2 cut(s)	232, 1459
BstX2I	RGATCY	1 cut(s)	55
BstYI	RGATCY	1 cut(s)	55
Bsu15I	ATCGAT	1 cut(s)	438
BsuI	GTATCC	1 cut(s)	494
BsuTUI	ATCGAT	1 cut(s)	438
BtgI	CCRYGG	2 cut(s)	280, 1489
BtsCI	GGATG	3 cut(s)	200, 713, 771
BtsIMutI	CAGTG	2 cut(s)	553, 1955
BveI	ACCTGC	1 cut(s)	1200
Cac8I	GCNNGC	7 cut(s)	1169, 1420, 1522, 1551, 1779, 1806, 1823
CaiI	CAGNNNCTG	1 cut(s)	50
CciI	TCATGA	1 cut(s)	1375
CfoI	GCGC	2 cut(s)	935, 1912
Cfr10I	RCCGGY	2 cut(s)	719, 1167
Cfr13I	GGNCC	4 cut(s)	110, 259, 968, 1884
ClaI	ATCGAT	1 cut(s)	438
Csp6I	GTAC	6 cut(s)	32, 340, 523, 585, 1190, 1288
CviQI	GTAC	6 cut(s)	32, 340, 523, 585, 1190, 1288
DdeI	CTNAG	3 cut(s)	59, 724, 1083
DpnI	GATC	7 cut(s)	57, 253, 458, 1094, 1677, 1725, 1860
DpnII	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
DraI	TTTAAA	2 cut(s)	660, 982
EaeI	YGGCCR	3 cut(s)	277, 772, 1165
Eam1104I	CTCTTC	2 cut(s)	356, 1097
EarI	CTCTTC	2 cut(s)	356, 1097
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	5 cut(s)	280, 527, 815, 1162, 1489
Eco24I	GRGCYC	1 cut(s)	405
Eco32I	GATATC	2 cut(s)	436, 1663
Eco47I	GGWCC	1 cut(s)	259
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	2 cut(s)	72, 1341
Eco91I	GGTNACC	1 cut(s)	1567
EcoICRI	GAGCTC	1 cut(s)	403
EcoNI	CCTNNNNNAGG	1 cut(s)	819
EcoO109I	RGGNCCY	1 cut(s)	259
EcoO65I	GGTNACC	1 cut(s)	1567
EcoRI	GAATTC	1 cut(s)	642
EcoRII	CCWGG	2 cut(s)	1437, 1811
EcoRV	GATATC	2 cut(s)	436, 1663
EcoT14I	CCWWGG	5 cut(s)	280, 527, 815, 1162, 1489
EcoT38I	GRGCYC	1 cut(s)	405
ErhI	CCWWGG	5 cut(s)	280, 527, 815, 1162, 1489
FaqI	GGGAC	2 cut(s)	303, 1507
FauNDI	CATATG	1 cut(s)	1957
FblI	GTMKAC	1 cut(s)	1970
Fnu4HI	GCNGC	6 cut(s)	45, 48, 274, 277, 1802, 1809
FokI	GGATG	3 cut(s)	187, 700, 778
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	6 cut(s)	45, 48, 274, 277, 1802, 1809
FspBI	CTAG	6 cut(s)	35, 311, 816, 1419, 1433, 1712
FspI	TGCGCA	2 cut(s)	934, 1911
GlaI	GCGC	2 cut(s)	934, 1911
GluI	GCNGC	6 cut(s)	45, 48, 274, 277, 1802, 1809
GsuI	CTGGAG	4 cut(s)	108, 775, 980, 1342
HapII	CCGG	9 cut(s)	114, 321, 720, 1168, 1180, 1544, 1652, 1865, 1983
HhaI	GCGC	2 cut(s)	935, 1912
Hin1I	GRCGYC	1 cut(s)	316
Hin6I	GCGC	2 cut(s)	933, 1910
HinP1I	GCGC	2 cut(s)	933, 1910
HincII	GTYRAC	1 cut(s)	1971
HindII	GTYRAC	1 cut(s)	1971
HindIII	AAGCTT	2 cut(s)	11, 1775
HinfI	GANTC	5 cut(s)	83, 123, 194, 1324, 1967
HpaII	CCGG	9 cut(s)	114, 321, 720, 1168, 1180, 1544, 1652, 1865, 1983
HphI	GGTGA	5 cut(s)	1064, 1169, 1250, 1561, 1862
Hpy166II	GTNNAC	3 cut(s)	1241, 1791, 1971
Hpy188I	TCNGA	7 cut(s)	211, 251, 256, 591, 849, 1329, 1927
Hpy188III	TCNNGA	7 cut(s)	87, 782, 1122, 1359, 1376, 1712, 1964
Hpy8I	GTNNAC	3 cut(s)	1241, 1791, 1971
HpyCH4III	ACNGT	2 cut(s)	268, 837
HpyCH4IV	ACGT	1 cut(s)	316
HpyCH4V	TGCA	9 cut(s)	1114, 1209, 1475, 1553, 1781, 1791, 1801, 1808, 1837
HpyF10VI	GCNNNNNNNGC	2 cut(s)	282, 1822
HpyF3I	CTNAG	3 cut(s)	59, 724, 1083
HpySE526I	ACGT	1 cut(s)	316
Hsp92I	GRCGYC	1 cut(s)	316
HspAI	GCGC	2 cut(s)	933, 1910
KpnI	GGTACC	1 cut(s)	526
KroI	GCCGGC	1 cut(s)	1167
KroNI	GCCGGC	1 cut(s)	1169
Kzo9I	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
LmnI	GCTCC	5 cut(s)	400, 619, 756, 955, 1546
Lsp1109I	GCAGC	5 cut(s)	56, 59, 285, 1813, 1820
LweI	GCATC	2 cut(s)	722, 1824
MaeI	CTAG	6 cut(s)	35, 311, 816, 1419, 1433, 1712
MaeII	ACGT	1 cut(s)	316
MaeIII	GTNAC	6 cut(s)	178, 604, 1175, 1219, 1567, 1736
MalI	GATC	7 cut(s)	57, 253, 458, 1094, 1677, 1725, 1860
MboI	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
MflI	RGATCY	1 cut(s)	55
MhlI	GDGCHC	5 cut(s)	405, 422, 1489, 1580, 1793
MlsI	TGGCCA	1 cut(s)	774
MluNI	TGGCCA	1 cut(s)	774
MlyI	GAGTC	5 cut(s)	92, 132, 188, 1333, 1976
MmeI	TCCRAC	2 cut(s)	329, 1673
Mox20I	TGGCCA	1 cut(s)	774
MroNI	GCCGGC	1 cut(s)	1167
MroXI	GAANNNNTTC	1 cut(s)	789
MscI	TGGCCA	1 cut(s)	774
MseI	TTAA	6 cut(s)	414, 510, 600, 659, 684, 981
MslI	CAYNNNNRTG	3 cut(s)	1407, 1583, 1786
Msp20I	TGGCCA	1 cut(s)	774
MspA1I	CMGCKG	2 cut(s)	50, 276
MspI	CCGG	9 cut(s)	114, 321, 720, 1168, 1180, 1544, 1652, 1865, 1983
MspR9I	CCNGG	6 cut(s)	114, 321, 1439, 1544, 1813, 1865
MvaI	CCWGG	2 cut(s)	1439, 1813
MwoI	GCNNNNNNNGC	2 cut(s)	282, 1822
NaeI	GCCGGC	1 cut(s)	1169
NciI	CCSGG	4 cut(s)	114, 321, 1544, 1865
NcoI	CCATGG	2 cut(s)	280, 1489
NdeI	CATATG	1 cut(s)	1957
NdeII	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
NgoMIV	GCCGGC	1 cut(s)	1167
NheI	GCTAGC	1 cut(s)	1418
NlaIV	GGNNCC	3 cut(s)	112, 261, 524
NmeAIII	GCCGAG	1 cut(s)	196
NmuCI	GTSAC	3 cut(s)	1175, 1219, 1567
NsbI	TGCGCA	2 cut(s)	934, 1911
NspI	RCATGY	4 cut(s)	738, 1267, 1553, 1825
OliI	CACNNNNGTG	1 cut(s)	1583
PaeI	GCATGC	2 cut(s)	1553, 1825
PagI	TCATGA	1 cut(s)	1375
PdiI	GCCGGC	1 cut(s)	1169
PdmI	GAANNNNTTC	1 cut(s)	789
PfoI	TCCNGGA	2 cut(s)	319, 1863
PkrI	GCNGC	6 cut(s)	46, 49, 275, 278, 1803, 1810
PleI	GAGTC	5 cut(s)	91, 131, 188, 1332, 1975
PpsI	GAGTC	5 cut(s)	91, 131, 188, 1332, 1975
PpuMI	RGGWCCY	1 cut(s)	259
PshBI	ATTAAT	1 cut(s)	600
Psp124BI	GAGCTC	1 cut(s)	405
Psp5II	RGGWCCY	1 cut(s)	259
Psp6I	CCWGG	2 cut(s)	1437, 1811
PspEI	GGTNACC	1 cut(s)	1567
PspGI	CCWGG	2 cut(s)	1437, 1811
PspN4I	GGNNCC	3 cut(s)	112, 261, 524
PspPI	GGNCC	4 cut(s)	110, 259, 968, 1884
PspPPI	RGGWCCY	1 cut(s)	259
PstI	CTGCAG	1 cut(s)	1810
PstNI	CAGNNNCTG	1 cut(s)	50
PsuI	RGATCY	1 cut(s)	55
PvuII	CAGCTG	1 cut(s)	50
RsaI	GTAC	6 cut(s)	33, 341, 524, 586, 1191, 1289
RsaNI	GTAC	6 cut(s)	32, 340, 523, 585, 1190, 1288
RseI	CAYNNNNRTG	3 cut(s)	1407, 1583, 1786
SacI	GAGCTC	1 cut(s)	405
SalI	GTCGAC	1 cut(s)	1969
SaqAI	TTAA	6 cut(s)	414, 510, 600, 659, 684, 981
SatI	GCNGC	6 cut(s)	45, 48, 274, 277, 1802, 1809
Sau3AI	GATC	7 cut(s)	55, 251, 456, 1092, 1675, 1723, 1858
Sau96I	GGNCC	4 cut(s)	110, 259, 968, 1884
ScaI	AGTACT	2 cut(s)	33, 341
SchI	GAGTC	5 cut(s)	92, 132, 188, 1333, 1976
ScrFI	CCNGG	6 cut(s)	114, 321, 1439, 1544, 1813, 1865
SduI	GDGCHC	5 cut(s)	405, 422, 1489, 1580, 1793
SfaNI	GCATC	2 cut(s)	722, 1824
SfcI	CTRYAG	2 cut(s)	1060, 1806
SinI	GGWCC	1 cut(s)	259
SmiMI	CAYNNNNRTG	3 cut(s)	1407, 1583, 1786
SmlI	CTYRAG	2 cut(s)	780, 1503
SmoI	CTYRAG	2 cut(s)	780, 1503
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	2 cut(s)	1553, 1825
SsiI	CCGC	2 cut(s)	276, 711
SspI	AATATT	2 cut(s)	97, 1708
SspMI	CTAG	6 cut(s)	35, 311, 816, 1419, 1433, 1712
SstI	GAGCTC	1 cut(s)	405
StyD4I	CCNGG	6 cut(s)	112, 319, 1437, 1542, 1811, 1863
StyI	CCWWGG	5 cut(s)	280, 527, 815, 1162, 1489
TaaI	ACNGT	2 cut(s)	268, 837
TaiI	ACGT	1 cut(s)	319
TaqI	TCGA	8 cut(s)	81, 362, 405, 438, 459, 573, 1611, 1970
TatI	WGTACW	3 cut(s)	31, 339, 1189
TauI	GCSGC	1 cut(s)	279
Tru1I	TTAA	6 cut(s)	414, 510, 600, 659, 684, 981
Tru9I	TTAA	6 cut(s)	414, 510, 600, 659, 684, 981
TscAI	CASTG	2 cut(s)	553, 1955
TseFI	GTSAC	3 cut(s)	1175, 1219, 1567
TseI	GCWGC	5 cut(s)	44, 47, 273, 1801, 1808
Tsp45I	GTSAC	3 cut(s)	1175, 1219, 1567
TspDTI	ATGAA	9 cut(s)	55, 392, 575, 782, 1148, 1364, 1392, 1932, 1944
TspGWI	ACGGA	2 cut(s)	437, 531
TspRI	CASTG	2 cut(s)	553, 1955
VneI	GTGCAC	1 cut(s)	1789
VpaK11BI	GGWCC	1 cut(s)	259
VspI	ATTAAT	1 cut(s)	600
XagI	CCTNNNNNAGG	1 cut(s)	819
XapI	RAATTY	4 cut(s)	213, 642, 1139, 1183
XbaI	TCTAGA	1 cut(s)	1711
XceI	RCATGY	4 cut(s)	738, 1267, 1553, 1825
XcmI	CCANNNNNNNNNTGG	2 cut(s)	564, 1445
XmaJI	CCTAGG	1 cut(s)	815
XmiI	GTMKAC	1 cut(s)	1970
XmnI	GAANNNNTTC	1 cut(s)	789
XspI	CTAG	6 cut(s)	35, 311, 816, 1419, 1433, 1712
ZraI	GACGTC	1 cut(s)	317
ZrmI	AGTACT	2 cut(s)	33, 341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.