Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004305.1

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Reverse (-)

47505 .. 49943

Gene Structure 2439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004305.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

atgtttgtcaagctttctgctctcctagtactactagtacttctggcacccgcagaagcccaagacctcaatttcatctacaatgatggtttctctggccgttctggtcttaatctcagtctagacggcatagcagagatcacatcaaaaggtctcttgaagcttacgaaccacaccaaacagagaactgacagaagtgctcatgccttctaccctaacccagtaaccttcaagaactcagagaacgactccgctttctccttctccaccaactttatctttgccatccaaccagagtacactactttcagcggccatggaatcgtctttgtcatcgctccgacgagaggcctccccggaggtctgccgaaccagtacctgagcctgttcaacgtctcgaacaatgggaatttcaccaatcatgtttttgctgtggagcttgacacgatcctgaacgcggaattcaatgacatcaatgataaccatgttgggatagacatcaatggcttgcgctctgtcaaagctgctccagctggttattttgatggtcagtacttcaagaacctgactcttatcagtggtaaagaaatgagagtttgggttgaatatgatggtacgaagaagcaaattgaagttactattgctccaattgctgttgcaactaaatccccaactccacttttgtctttgaaatatgacctttccccaattctcaacaaaaccatgtatgttggcttttcctcttcaaatggtccgttcctcacctcccattctgtagtgggttggagctttaggatgaatggtcaagctcaagaccttatagcttccaaacttcccaagttgcctagcattgcaggtaaaaagaggtccatgcttttcacctttggtgtgcctctgatttccgtgagttcggttttgctagtggtttctggggtgctttatgtcataagtaggaagaggaagtttgcagaagtgcttgaagattgggagcaagagtatgttcctcagaggtttaagtacaaagaattgtatatagccaccaaagggtttagggaaaaggagcttttgggaactgggggatttggtaaagttcatagaggtttattaccctcctctaaaattgagattgcagtgaagagggtatcacatgaattaagacaggggatgaaggaatttgtagcagaaattgttagtattggtcgacttcgtcaccggaatttagtacaactgttgggatattgcaggcgaaaaggggagctgcttttggtctatgactacatgcctaatggaagcttggacaaatacctctttgatcaacctgaggtgacccttaattggagccagaggtttaaagtcatcaagggtgtggcttcagggctgttctatcttcatgaagaatgggaacaggttgtgattcatagagatgtgaaggccagtaatgtgttgctagatggggagttgaatggaaggctaggagattttgggcttgcaagattatacgaccatggaacagaccctcaaactactcatatagttggaacattcgggtacctagctccagagtacacaagaactggtcgggccaccacgaggaccgacgtgtttgcttttggggcatttttgctcgaagttggttgcggaagaaggccaattaagacacagggtccggaagatgtgattttggttgattgggtgttttcttattggaatagaacggcaaggccaagcatgcgacaagtcgttcagtacttggccggtgatgttgctttgccggaagtgtcacttcccgggctttcttctaatggcttaacggttggacaccgtgaaggttttgatgactatgctatgtcgtatcagtcttccttaggccaggggtccttgcattcatcagatactgcagagtcggcactactttcaggtggtcgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

642

Amino Acids

71.24

Weight (kDa)

8.89

Isoelectric Point (pI)

34.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	845
Acc65I	GGTACC	1 cut(s)	1548
AccB1I	GGYRCC	2 cut(s)	46, 1548
AccI	GTMKAC	1 cut(s)	1201
AccII	CGCG	1 cut(s)	458
AccIII	TCCGGA	1 cut(s)	1666
AciI	CCGC	5 cut(s)	51, 252, 312, 458, 1638
AclWI	GGATC	1 cut(s)	442
AcoI	YGGCCR	3 cut(s)	97, 313, 1752
AcsI	RAATTY	4 cut(s)	409, 461, 1172, 1216
AcuI	CTGAAG	1 cut(s)	1356
AfiI	CCNNNNNNNGG	5 cut(s)	347, 457, 1044, 1335, 1590
AflIII	ACRYGT	1 cut(s)	1599
AhdI	GACNNNNNGTC	1 cut(s)	1662
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	1600
AjnI	CCWGG	1 cut(s)	1869
Alw21I	GWGCWC	1 cut(s)	202
Alw26I	GTCTC	2 cut(s)	158, 400
AlwI	GGATC	1 cut(s)	442
AlwNI	CAGNNNCTG	2 cut(s)	379, 1895
Ama87I	CYCGRG	1 cut(s)	1787
Aor13HI	TCCGGA	1 cut(s)	1666
AoxI	GGCC	9 cut(s)	97, 313, 349, 1431, 1581, 1646, 1721, 1752, 1867
ApeKI	GCWGC	2 cut(s)	524, 1258
ApoI	RAATTY	4 cut(s)	409, 461, 1172, 1216
Asp718I	GGTACC	1 cut(s)	1548
AspLEI	GCGC	1 cut(s)	513
AspS9I	GGNCC	6 cut(s)	752, 867, 1581, 1593, 1664, 1875
AsuC2I	CCSGG	3 cut(s)	357, 1788, 1789
AsuHPI	GGTGA	6 cut(s)	406, 754, 871, 1202, 1336, 1769
AvaI	CYCGRG	1 cut(s)	1787
AvaII	GGWCC	5 cut(s)	752, 867, 1593, 1664, 1875
AxyI	CCTNAGG	2 cut(s)	1320, 1864
BanI	GGYRCC	2 cut(s)	46, 1548
BauI	CACGAG	1 cut(s)	1588
BbsI	GAAGAC	1 cut(s)	1851
Bbv12I	GWGCWC	1 cut(s)	202
BbvI	GCAGC	2 cut(s)	511, 1245
BccI	CCATC	5 cut(s)	80, 293, 539, 605, 1445
BceAI	ACGGC	3 cut(s)	84, 142, 1731
BcgI	CGANNNNNNTGC	2 cut(s)	1586, 1620
BciT130I	CCWGG	1 cut(s)	1871
BclI	TGATCA	1 cut(s)	1312
BcnI	CCSGG	3 cut(s)	357, 1788, 1789
BcoDI	GTCTC	2 cut(s)	158, 400
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	8 cut(s)	26, 35, 122, 846, 920, 1448, 1472, 1553
BfmI	CTRYAG	2 cut(s)	774, 1896
BfuAI	ACCTGC	1 cut(s)	845
BisI	GCNGC	3 cut(s)	313, 525, 1259
BlsI	GCNGC	3 cut(s)	314, 526, 1260
BmcAI	AGTACT	4 cut(s)	30, 39, 554, 1748
Bme1390I	CCNGG	4 cut(s)	357, 1788, 1789, 1871
Bme18I	GGWCC	5 cut(s)	752, 867, 1593, 1664, 1875
BmeRI	GACNNNNNGTC	1 cut(s)	1662
BmeT110I	CYCGRG	1 cut(s)	1787
BmgBI	CACGTC	1 cut(s)	1600
BmgT120I	GGNCC	6 cut(s)	752, 867, 1581, 1593, 1664, 1875
BmiI	GGNNCC	5 cut(s)	48, 1340, 1550, 1665, 1876
BmrFI	CCNGG	4 cut(s)	357, 1788, 1789, 1871
BmrI	ACTGGG	2 cut(s)	215, 1083
BmuI	ACTGGG	2 cut(s)	215, 1083
BpiI	GAAGAC	1 cut(s)	1851
BplI	GAGNNNNNCTC	2 cut(s)	233, 265
BpmI	CTGGAG	2 cut(s)	513, 1542
Bpu10I	CCTNAGC	1 cut(s)	380
BpuEI	CTTGAG	1 cut(s)	795
BpuMI	CCSGG	3 cut(s)	357, 1788, 1789
BsaBI	GATNNNNATC	1 cut(s)	497
BsaI	GGTCTC	1 cut(s)	158
BsaJI	CCNNGG	5 cut(s)	316, 355, 1504, 1787, 1870
BsaWI	WCCGGW	2 cut(s)	1212, 1666
BsaXI	ACNNNNNCTCC	4 cut(s)	628, 658, 980, 1010
Bsc4I	CCNNNNNNNGG	5 cut(s)	347, 457, 1044, 1335, 1590
Bse118I	RCCGGY	1 cut(s)	1754
Bse1I	ACTGG	5 cut(s)	221, 373, 1078, 1434, 1579
Bse21I	CCTNAGG	2 cut(s)	1320, 1864
Bse3DI	GCAATG	1 cut(s)	849
Bse8I	GATNNNNATC	1 cut(s)	497
BseAI	TCCGGA	1 cut(s)	1666
BseBI	CCWGG	1 cut(s)	1871
BseDI	CCNNGG	5 cut(s)	316, 355, 1504, 1787, 1870
BseGI	GGATG	3 cut(s)	285, 801, 1170
BseJI	GATNNNNATC	1 cut(s)	497
BseLI	CCNNNNNNNGG	5 cut(s)	347, 457, 1044, 1335, 1590
BseMI	GCAATG	1 cut(s)	849
BseMII	CTCAG	5 cut(s)	130, 252, 371, 1019, 1311
BseNI	ACTGG	5 cut(s)	221, 373, 1078, 1434, 1579
BseRI	GAGGAG	1 cut(s)	1102
BseXI	GCAGC	2 cut(s)	511, 1245
Bsh1236I	CGCG	1 cut(s)	458
BshFI	GGCC	9 cut(s)	99, 315, 351, 1433, 1583, 1648, 1723, 1754, 1869
BshNI	GGYRCC	2 cut(s)	46, 1548
BsiHKAI	GWGCWC	1 cut(s)	202
BsiHKCI	CYCGRG	1 cut(s)	1787
BsiSI	CCGG	6 cut(s)	357, 1213, 1667, 1755, 1772, 1788
BslI	CCNNNNNNNGG	5 cut(s)	347, 457, 1044, 1335, 1590
BsmAI	GTCTC	2 cut(s)	158, 400
BsmBI	CGTCTC	1 cut(s)	400
BsmI	GAATGC	1 cut(s)	1882
BsnI	GGCC	9 cut(s)	99, 315, 351, 1433, 1583, 1648, 1723, 1754, 1869
Bso31I	GGTCTC	1 cut(s)	158
BsoBI	CYCGRG	1 cut(s)	1787
Bsp1286I	GDGCHC	1 cut(s)	202
Bsp13I	TCCGGA	1 cut(s)	1666
Bsp143I	GATC	3 cut(s)	138, 447, 1312
Bsp19I	CCATGG	2 cut(s)	316, 1504
BspACI	CCGC	5 cut(s)	51, 252, 312, 458, 1638
BspANI	GGCC	9 cut(s)	99, 315, 351, 1433, 1583, 1648, 1723, 1754, 1869
BspCNI	CTCAG	5 cut(s)	129, 251, 372, 1018, 1312
BspEI	TCCGGA	1 cut(s)	1666
BspFNI	CGCG	1 cut(s)	458
BspHI	TCATGA	1 cut(s)	1390
BspLI	GGNNCC	5 cut(s)	48, 1340, 1550, 1665, 1876
BspMAI	CTGCAG	1 cut(s)	1900
BspMI	ACCTGC	1 cut(s)	845
BspPI	GGATC	1 cut(s)	442
BspT107I	GGYRCC	2 cut(s)	46, 1548
BspTNI	GGTCTC	1 cut(s)	158
BsrDI	GCAATG	1 cut(s)	849
BsrFI	RCCGGY	1 cut(s)	1754
BsrI	ACTGG	5 cut(s)	221, 373, 1078, 1434, 1579
BssAI	RCCGGY	1 cut(s)	1754
BssECI	CCNNGG	5 cut(s)	316, 355, 1504, 1787, 1870
BssMI	GATC	3 cut(s)	138, 447, 1312
BssSI	CACGAG	1 cut(s)	1588
BssT1I	CCWWGG	2 cut(s)	316, 1504
Bst2BI	CACGAG	1 cut(s)	1588
Bst2UI	CCWGG	1 cut(s)	1871
Bst4CI	ACNGT	3 cut(s)	1230, 1813, 1823
Bst6I	CTCTTC	3 cut(s)	748, 950, 1130
BstC8I	GCNNGC	4 cut(s)	509, 1244, 1488, 1730
BstDEI	CTNAG	6 cut(s)	116, 238, 380, 1005, 1320, 1864
BstDSI	CCRYGG	2 cut(s)	316, 1504
BstEII	GGTNACC	1 cut(s)	1324
BstF5I	GGATG	3 cut(s)	285, 801, 1170
BstFNI	CGCG	1 cut(s)	458
BstHHI	GCGC	1 cut(s)	513
BstKTI	GATC	3 cut(s)	141, 450, 1315
BstMAI	GTCTC	2 cut(s)	158, 400
BstMBI	GATC	3 cut(s)	138, 447, 1312
BstMWI	GCNNNNNNNGC	5 cut(s)	530, 650, 1613, 1729, 1904
BstNI	CCWGG	1 cut(s)	1871
BstNSI	RCATGY	2 cut(s)	1282, 1732
BstPI	GGTNACC	1 cut(s)	1324
BstSCI	CCNGG	4 cut(s)	355, 1786, 1787, 1869
BstSFI	CTRYAG	2 cut(s)	774, 1896
BstUI	CGCG	1 cut(s)	458
BstV1I	GCAGC	2 cut(s)	511, 1245
BstV2I	GAAGAC	1 cut(s)	1851
Bsu36I	CCTNAGG	2 cut(s)	1320, 1864
BsuRI	GGCC	9 cut(s)	99, 315, 351, 1433, 1583, 1648, 1723, 1754, 1869
BtgI	CCRYGG	2 cut(s)	316, 1504
BtgZI	GCGATG	1 cut(s)	319
BtrI	CACGTC	1 cut(s)	1600
BtsCI	GGATG	3 cut(s)	285, 801, 1170
BtsI	GCAGTG	1 cut(s)	1137
BtsIMutI	CAGTG	2 cut(s)	583, 1137
BveI	ACCTGC	1 cut(s)	845
Cac8I	GCNNGC	4 cut(s)	509, 1244, 1488, 1730
CaiI	CAGNNNCTG	2 cut(s)	379, 1895
CciI	TCATGA	1 cut(s)	1390
CfoI	GCGC	1 cut(s)	513
Cfr10I	RCCGGY	1 cut(s)	1754
Cfr13I	GGNCC	6 cut(s)	752, 867, 1581, 1593, 1664, 1875
Cfr9I	CCCGGG	1 cut(s)	1787
DdeI	CTNAG	6 cut(s)	116, 238, 380, 1005, 1320, 1864
DpnI	GATC	3 cut(s)	140, 449, 1314
DpnII	GATC	3 cut(s)	138, 447, 1312
DraI	TTTAAA	1 cut(s)	1351
DriI	GACNNNNNGTC	1 cut(s)	1662
EaeI	YGGCCR	3 cut(s)	97, 313, 1752
Eam1104I	CTCTTC	3 cut(s)	748, 950, 1130
Eam1105I	GACNNNNNGTC	1 cut(s)	1662
EarI	CTCTTC	3 cut(s)	748, 950, 1130
Eco130I	CCWWGG	2 cut(s)	316, 1504
Eco147I	AGGCCT	1 cut(s)	351
Eco31I	GGTCTC	1 cut(s)	158
Eco47I	GGWCC	5 cut(s)	752, 867, 1593, 1664, 1875
Eco57I	CTGAAG	1 cut(s)	1356
Eco81I	CCTNAGG	2 cut(s)	1320, 1864
Eco88I	CYCGRG	1 cut(s)	1787
Eco91I	GGTNACC	1 cut(s)	1324
EcoO109I	RGGNCCY	1 cut(s)	1875
EcoO65I	GGTNACC	1 cut(s)	1324
EcoRI	GAATTC	1 cut(s)	461
EcoRII	CCWGG	1 cut(s)	1869
EcoT14I	CCWWGG	2 cut(s)	316, 1504
ErhI	CCWWGG	2 cut(s)	316, 1504
Esp3I	CGTCTC	1 cut(s)	400
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FauI	CCCGC	1 cut(s)	58
FbaI	TGATCA	1 cut(s)	1312
FblI	GTMKAC	1 cut(s)	1201
Fnu4HI	GCNGC	3 cut(s)	313, 525, 1259
FokI	GGATG	3 cut(s)	272, 808, 1177
Fsp4HI	GCNGC	3 cut(s)	313, 525, 1259
FspBI	CTAG	8 cut(s)	26, 35, 122, 846, 920, 1448, 1472, 1553
GlaI	GCGC	1 cut(s)	512
GluI	GCNGC	3 cut(s)	313, 525, 1259
GsuI	CTGGAG	2 cut(s)	513, 1542
HaeIII	GGCC	9 cut(s)	99, 315, 351, 1433, 1583, 1648, 1723, 1754, 1869
HapII	CCGG	6 cut(s)	357, 1213, 1667, 1755, 1772, 1788
HhaI	GCGC	1 cut(s)	513
Hin6I	GCGC	1 cut(s)	511
HinP1I	GCGC	1 cut(s)	511
HincII	GTYRAC	1 cut(s)	1202
HindII	GTYRAC	1 cut(s)	1202
HindIII	AAGCTT	3 cut(s)	11, 161, 1291
HinfI	GANTC	5 cut(s)	248, 321, 568, 1414, 1901
HpaII	CCGG	6 cut(s)	357, 1213, 1667, 1755, 1772, 1788
HphI	GGTGA	6 cut(s)	406, 754, 871, 1202, 1336, 1769
Hpy166II	GTNNAC	3 cut(s)	300, 1202, 1566
Hpy188I	TCNGA	5 cut(s)	241, 342, 897, 1008, 1891
Hpy8I	GTNNAC	3 cut(s)	300, 1202, 1566
Hpy99I	CGWCG	2 cut(s)	346, 1601
HpyAV	CCTTC	8 cut(s)	217, 238, 271, 1162, 1423, 1461, 1638, 1820
HpyCH4III	ACNGT	3 cut(s)	1230, 1813, 1823
HpyCH4IV	ACGT	2 cut(s)	393, 1599
HpyCH4V	TGCA	8 cut(s)	659, 854, 968, 1130, 1242, 1490, 1882, 1898
HpyF10VI	GCNNNNNNNGC	5 cut(s)	530, 650, 1613, 1729, 1904
HpyF3I	CTNAG	6 cut(s)	116, 238, 380, 1005, 1320, 1864
HpySE526I	ACGT	2 cut(s)	393, 1599
HspAI	GCGC	1 cut(s)	511
Kpn2I	TCCGGA	1 cut(s)	1666
KpnI	GGTACC	1 cut(s)	1552
Ksp22I	TGATCA	1 cut(s)	1312
Kzo9I	GATC	3 cut(s)	138, 447, 1312
Lsp1109I	GCAGC	2 cut(s)	511, 1245
MaeI	CTAG	8 cut(s)	26, 35, 122, 846, 920, 1448, 1472, 1553
MaeII	ACGT	2 cut(s)	393, 1599
MaeIII	GTNAC	5 cut(s)	223, 634, 1208, 1324, 1779
MalI	GATC	3 cut(s)	140, 449, 1314
MboI	GATC	3 cut(s)	138, 447, 1312
MfeI	CAATTG	1 cut(s)	648
MhlI	GDGCHC	1 cut(s)	202
MlyI	GAGTC	3 cut(s)	242, 562, 1910
MmeI	TCCRAC	5 cut(s)	313, 365, 764, 1516, 1795
MroI	TCCGGA	1 cut(s)	1666
MseI	TTAA	7 cut(s)	111, 1014, 1154, 1332, 1350, 1653, 1808
MslI	CAYNNNNRTG	1 cut(s)	1422
MspA1I	CMGCKG	2 cut(s)	312, 533
MspI	CCGG	6 cut(s)	357, 1213, 1667, 1755, 1772, 1788
MspR9I	CCNGG	4 cut(s)	357, 1788, 1789, 1871
MunI	CAATTG	1 cut(s)	648
Mva1269I	GAATGC	1 cut(s)	1882
MvaI	CCWGG	1 cut(s)	1871
MvnI	CGCG	1 cut(s)	458
MwoI	GCNNNNNNNGC	5 cut(s)	530, 650, 1613, 1729, 1904
NciI	CCSGG	3 cut(s)	357, 1788, 1789
NcoI	CCATGG	2 cut(s)	316, 1504
NdeII	GATC	3 cut(s)	138, 447, 1312
NlaIV	GGNNCC	5 cut(s)	48, 1340, 1550, 1665, 1876
NmuCI	GTSAC	3 cut(s)	1208, 1324, 1779
NspI	RCATGY	2 cut(s)	1282, 1732
PaeI	GCATGC	1 cut(s)	1732
PagI	TCATGA	1 cut(s)	1390
PceI	AGGCCT	1 cut(s)	351
PctI	GAATGC	1 cut(s)	1882
PfeI	GAWTC	2 cut(s)	321, 1414
PflFI	GACNNNGTC	1 cut(s)	1206
PkrI	GCNGC	3 cut(s)	314, 526, 1260
PleI	GAGTC	3 cut(s)	242, 562, 1909
PpsI	GAGTC	3 cut(s)	242, 562, 1909
PpuMI	RGGWCCY	1 cut(s)	1875
Psp5II	RGGWCCY	1 cut(s)	1875
Psp6I	CCWGG	1 cut(s)	1869
PspEI	GGTNACC	1 cut(s)	1324
PspGI	CCWGG	1 cut(s)	1869
PspN4I	GGNNCC	5 cut(s)	48, 1340, 1550, 1665, 1876
PspPI	GGNCC	6 cut(s)	752, 867, 1581, 1593, 1664, 1875
PspPPI	RGGWCCY	1 cut(s)	1875
PstI	CTGCAG	1 cut(s)	1900
PstNI	CAGNNNCTG	2 cut(s)	379, 1895
PsyI	GACNNNGTC	1 cut(s)	1206
PvuII	CAGCTG	1 cut(s)	533
RseI	CAYNNNNRTG	1 cut(s)	1422
SalI	GTCGAC	1 cut(s)	1200
SaqAI	TTAA	7 cut(s)	111, 1014, 1154, 1332, 1350, 1653, 1808
SatI	GCNGC	3 cut(s)	313, 525, 1259
Sau3AI	GATC	3 cut(s)	138, 447, 1312
Sau96I	GGNCC	6 cut(s)	752, 867, 1581, 1593, 1664, 1875
ScaI	AGTACT	4 cut(s)	30, 39, 554, 1748
SchI	GAGTC	3 cut(s)	242, 562, 1910
ScrFI	CCNGG	4 cut(s)	357, 1788, 1789, 1871
SduI	GDGCHC	1 cut(s)	202
SfcI	CTRYAG	2 cut(s)	774, 1896
SinI	GGWCC	5 cut(s)	752, 867, 1593, 1664, 1875
SmaI	CCCGGG	1 cut(s)	1789
SmiMI	CAYNNNNRTG	1 cut(s)	1422
SmlI	CTYRAG	1 cut(s)	810
SmoI	CTYRAG	1 cut(s)	810
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	1732
SseBI	AGGCCT	1 cut(s)	351
SsiI	CCGC	5 cut(s)	51, 252, 312, 458, 1638
SspMI	CTAG	8 cut(s)	26, 35, 122, 846, 920, 1448, 1472, 1553
StuI	AGGCCT	1 cut(s)	351
StyD4I	CCNGG	4 cut(s)	355, 1786, 1787, 1869
StyI	CCWWGG	2 cut(s)	316, 1504
TaaI	ACNGT	3 cut(s)	1230, 1813, 1823
TaiI	ACGT	2 cut(s)	396, 1602
TaqI	TCGA	3 cut(s)	398, 1201, 1626
TaqII	GACCGA	1 cut(s)	1610
TatI	WGTACW	8 cut(s)	28, 37, 297, 552, 1017, 1222, 1563, 1746
TauI	GCSGC	1 cut(s)	315
TfiI	GAWTC	2 cut(s)	321, 1414
Tru1I	TTAA	7 cut(s)	111, 1014, 1154, 1332, 1350, 1653, 1808
Tru9I	TTAA	7 cut(s)	111, 1014, 1154, 1332, 1350, 1653, 1808
TscAI	CASTG	2 cut(s)	583, 1137
TseFI	GTSAC	3 cut(s)	1208, 1324, 1779
TseI	GCWGC	2 cut(s)	524, 1258
Tsp45I	GTSAC	3 cut(s)	1208, 1324, 1779
TspDTI	ATGAA	9 cut(s)	64, 812, 1082, 1164, 1181, 1379, 1406, 1407, 1875
TspGWI	ACGGA	2 cut(s)	744, 892
TspMI	CCCGGG	1 cut(s)	1787
TspRI	CASTG	2 cut(s)	583, 1137
Tth111I	GACNNNGTC	1 cut(s)	1206
VpaK11BI	GGWCC	5 cut(s)	752, 867, 1593, 1664, 1875
XapI	RAATTY	4 cut(s)	409, 461, 1172, 1216
XbaI	TCTAGA	1 cut(s)	121
XceI	RCATGY	2 cut(s)	1282, 1732
XmaI	CCCGGG	1 cut(s)	1787
XmiI	GTMKAC	1 cut(s)	1201
XspI	CTAG	8 cut(s)	26, 35, 122, 846, 920, 1448, 1472, 1553
ZrmI	AGTACT	4 cut(s)	30, 39, 554, 1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.