Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000454.1

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Reverse (-)

98625 .. 102910

Gene Structure 4286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000454.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

atgtttctcaagccttctgttctcctagtactactagtgcttctggtaccagcagaagcccaagacctcaatttcatctacaatgatggtttcaacggccgttctggtcttaatgtcagtctagacggcatagcagagatcacacaaaatggtcttttgaagcttacaaacgacaccaaacagaaaagtggccatgccttctaccctaacccagtaaccttcaagaactcagataacgacactgctttctccttctccaccaactttgtctttgccatccgatcacagtacactactctcagcggccatggaatcgcctttgtcatcgctccgacgagaggcctccccggagctctgccgagccagtacttgggcctgttcagcgggtccaacaatgggaatttcagcaatcatgtttttgctgtggagctggacacgatccagagcacggaattcagtgacatggatgaaaaccatgttgggatcgacatcaatggcttgcactctgtcaaagctgcttcagctggttattttggtggtcagtacttcaagaacctgactcttatcagtggtaaagaaatgagagtttgggttgaatatgatggtaccaagaagcaaattgaagttactatggctccaattaatgttgcaactaaaccttcaactccacttttgtctttgaaatatgacctttccacagttctctacaaaaccatgtatgttggcttttcctcttcaactggttcagtgctcacatcccattatgtagcgggttggagctttaggatcaatggccaagctcaagacctcatagcttccaaacttcccaagttgcccagcattgcaggtaaaaagaggtccatgcttttcacctttggtgtgcctctgatttcagcgagtttggttttgctagcgggttctggtgtactttatgtcataaataggaagaggaagtttgcagaagtgcttgaagattgggagctagagtacgggcctcagaggtttaagtacaaagaattgtatatagccaccaaagggtttagggaaaaggagcttttgggaactgggggatttggtaaagtttatagaggtttatttccctcctctaaaattgagattgcagtgaagagggtatcacatgaatcaagacaggggatgaaggaatttgtagcagaaattgttagtattggccggcttcgtcaccggaatttattaaatgacgattttgggctccagaaatttaaaaattacatactgccatctctctcctctccaactctctatgccggctatttcttctctctctccctctctctcctccctcgctccctgccggtgacttcctttctctctcttctctcccctccttctctctctacatggtatgacgccggtattcaccgaccacatcgccaccgtctccaatgccgtcactccctcgccgggaagaatcgacccgaaccgcgaagcagcaagacgactctgattcgtccaatttcgccggaatggacgccccgttcaactcaatcaacttcgagccctgttcgattcaatcaactcagagcctcttcgattcaatcaacttcgaagctcgagaacgtgaattgctggcggtgctactccgagcccagttccgattctgacgaggctcgaaaacttgaactgctggttgtgcacggcgctaggggttctgcaatccgatgcaaagcctcgcctgaagacagcgaagcacttagggttccggtcccaggggagctgcttttggtctatgattacatgcctaatggaagcttggacaaatacctctatgatcaacctgaagtgacccttaattggagccagaggtttaaagtcatcaaaggtgtggcgtcagggttgttctatcttcatgaagaatgggaacaggttgtgattcatagagatgtgaaggccagtaatgtgttgctagatggggaattgaatggaagactaggagatttcgggcttgcaagattatacgaccatggaacagatcctcaaactactcatatagttggaacactcgggtacctagccccagagcacacaagaacaggtcgggccaccacgagcaccgacgtgtttgcttttggggcatttttgctcgaagttgcttgcggaaaaaggccaattgagacacagggtccagaagatgtgattttggttgattgggtgttttcttgttggaatagaagtaacattcttgaggcaagagatcagagctttggtacggattttgtagccgaggaagtggagttggtgttgaagcttgggcttttgtgctctcattcggagccagcggcaaggccaagcatgcgacaagtcgttcagtacttggccggtgatgttgctttgccggaagtgtcacttcttgggctttcttctagtggcttaacgtttgcgcaccgtgaaggttttgatgactatgctatgtcatatcaatcttctttaggcactaggttctcccattcatcatatattgcagaatcggtactactttcaggtggtcgttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

843

Amino Acids

93.29

Weight (kDa)

8.52

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2421
Acc36I	ACCTGC	1 cut(s)	836
Acc65I	GGTACC	3 cut(s)	46, 605, 2046
AccB1I	GGYRCC	3 cut(s)	46, 605, 2046
AccB7I	CCANNNNNTGG	1 cut(s)	370
AccII	CGCG	1 cut(s)	1465
AciI	CCGC	8 cut(s)	303, 384, 770, 914, 1463, 1612, 2136, 2318
AclI	AACGTT	1 cut(s)	2414
AclWI	GGATC	4 cut(s)	433, 491, 794, 2006
AcoI	YGGCCR	6 cut(s)	97, 190, 304, 793, 1189, 2355
AcsI	RAATTY	5 cut(s)	400, 452, 1163, 1207, 1238
AcuI	CTGAAG	3 cut(s)	504, 1737, 1839
AcyI	GRCGYC	3 cut(s)	1389, 1511, 1868
AfiI	CCNNNNNNNGG	8 cut(s)	338, 370, 396, 448, 1035, 1443, 1748, 1833
AflIII	ACRYGT	1 cut(s)	2097
AhdI	GACNNNNNGTC	1 cut(s)	2160
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	2098
AjnI	CCWGG	1 cut(s)	1747
AjuI	GAANNNNNNNTTGG	2 cut(s)	462, 494
AleI	CACNNNNGTG	1 cut(s)	2096
AloI	GAACNNNNNNTCC	2 cut(s)	1501, 1533
Alw21I	GWGCWC	7 cut(s)	355, 449, 753, 1677, 2064, 2093, 2303
Alw26I	GTCTC	2 cut(s)	1424, 2147
Alw44I	GTGCAC	1 cut(s)	1673
AlwI	GGATC	4 cut(s)	433, 491, 794, 2006
Ama87I	CYCGRG	2 cut(s)	1592, 2042
ApaLI	GTGCAC	1 cut(s)	1673
ApeKI	GCWGC	3 cut(s)	515, 1470, 1756
ApoI	RAATTY	5 cut(s)	400, 452, 1163, 1207, 1238
AseI	ATTAAT	1 cut(s)	642
Asp718I	GGTACC	3 cut(s)	46, 605, 2046
AspLEI	GCGC	2 cut(s)	1682, 2422
AspS9I	GGNCC	7 cut(s)	373, 387, 858, 992, 1744, 2079, 2162
AsuC2I	CCSGG	2 cut(s)	348, 1444
AsuHPI	GGTGA	5 cut(s)	862, 1193, 1348, 1391, 2372
AsuII	TTCGAA	1 cut(s)	1586
AsuNHI	GCTAGC	1 cut(s)	910
AvaI	CYCGRG	2 cut(s)	1592, 2042
AvaII	GGWCC	4 cut(s)	387, 858, 1744, 2162
BaeGI	GKGCMC	1 cut(s)	1677
BaeI	ACNNNNGTAYC	2 cut(s)	2030, 2063
BalI	TGGCCA	2 cut(s)	192, 795
BanI	GGYRCC	3 cut(s)	46, 605, 2046
BanII	GRGCYC	4 cut(s)	355, 1233, 1541, 1629
BauI	CACGAG	1 cut(s)	2086
BbsI	GAAGAC	2 cut(s)	1725, 1972
Bbv12I	GWGCWC	7 cut(s)	355, 449, 753, 1677, 2064, 2093, 2303
BbvI	GCAGC	3 cut(s)	502, 1482, 1743
BccI	CCATC	5 cut(s)	80, 284, 596, 1267, 1943
BceAI	ACGGC	5 cut(s)	84, 112, 142, 1413, 1693
BcgI	CGANNNNNNTGC	2 cut(s)	2084, 2118
BciT130I	CCWGG	1 cut(s)	1749
BclI	TGATCA	1 cut(s)	1810
BcnI	CCSGG	2 cut(s)	348, 1444
BcoDI	GTCTC	2 cut(s)	1424, 2147
BcuI	ACTAGT	1 cut(s)	34
BfoI	RGCGCY	1 cut(s)	1683
BfuAI	ACCTGC	1 cut(s)	836
BisI	GCNGC	5 cut(s)	304, 516, 1471, 1757, 2319
BlsI	GCNGC	5 cut(s)	305, 517, 1472, 1758, 2320
BmcAI	AGTACT	4 cut(s)	30, 368, 545, 2351
Bme1390I	CCNGG	3 cut(s)	348, 1444, 1749
Bme18I	GGWCC	4 cut(s)	387, 858, 1744, 2162
BmeRI	GACNNNNNGTC	1 cut(s)	2160
BmeT110I	CYCGRG	2 cut(s)	1592, 2042
BmgBI	CACGTC	1 cut(s)	2098
BmgT120I	GGNCC	7 cut(s)	373, 387, 858, 992, 1744, 2079, 2162
BmrFI	CCNGG	3 cut(s)	348, 1444, 1749
BmrI	ACTGGG	3 cut(s)	206, 1074, 1623
BmsI	GCATC	1 cut(s)	1691
BmtI	GCTAGC	1 cut(s)	914
BmuI	ACTGGG	3 cut(s)	206, 1074, 1623
BpiI	GAAGAC	2 cut(s)	1725, 1972
BpmI	CTGGAG	1 cut(s)	1217
Bpu14I	TTCGAA	1 cut(s)	1586
BpuEI	CTTGAG	2 cut(s)	786, 2243
BpuMI	CCSGG	2 cut(s)	348, 1444
BsaBI	GATNNNNATC	1 cut(s)	488
BsaHI	GRCGYC	3 cut(s)	1389, 1511, 1868
BsaJI	CCNNGG	6 cut(s)	307, 346, 1747, 1748, 2002, 2262
BsaWI	WCCGGW	2 cut(s)	1203, 1741
BsaXI	ACNNNNNCTCC	6 cut(s)	619, 649, 971, 1001, 2264, 2294
Bsc4I	CCNNNNNNNGG	8 cut(s)	338, 370, 396, 448, 1035, 1443, 1748, 1833
Bse118I	RCCGGY	5 cut(s)	1191, 1286, 1333, 1391, 2357
Bse1I	ACTGG	6 cut(s)	212, 364, 745, 1069, 1629, 1932
Bse3DI	GCAATG	1 cut(s)	840
Bse8I	GATNNNNATC	1 cut(s)	488
BseBI	CCWGG	1 cut(s)	1749
BseDI	CCNNGG	6 cut(s)	307, 346, 1747, 1748, 2002, 2262
BseGI	GGATG	4 cut(s)	276, 472, 755, 1161
BseJI	GATNNNNATC	1 cut(s)	488
BseLI	CCNNNNNNNGG	8 cut(s)	338, 370, 396, 448, 1035, 1443, 1748, 1833
BseMI	GCAATG	1 cut(s)	840
BseMII	CTCAG	4 cut(s)	243, 313, 1010, 1573
BseNI	ACTGG	6 cut(s)	212, 364, 745, 1069, 1629, 1932
BseRI	GAGGAG	3 cut(s)	1093, 1258, 1307
BseSI	GKGCMC	1 cut(s)	1677
BseX3I	CGGCCG	1 cut(s)	97
BseXI	GCAGC	3 cut(s)	502, 1482, 1743
BseYI	CCCAGC	1 cut(s)	836
Bsh1236I	CGCG	1 cut(s)	1465
Bsh1285I	CGRYCG	1 cut(s)	100
BshNI	GGYRCC	3 cut(s)	46, 605, 2046
BsiEI	CGRYCG	1 cut(s)	100
BsiHKAI	GWGCWC	7 cut(s)	355, 449, 753, 1677, 2064, 2093, 2303
BsiHKCI	CYCGRG	2 cut(s)	1592, 2042
BslFI	GGGAC	1 cut(s)	1730
BslI	CCNNNNNNNGG	8 cut(s)	338, 370, 396, 448, 1035, 1443, 1748, 1833
BsmAI	GTCTC	2 cut(s)	1424, 2147
BsmBI	CGTCTC	1 cut(s)	1424
BsmFI	GGGAC	1 cut(s)	1730
BsoBI	CYCGRG	2 cut(s)	1592, 2042
Bsp119I	TTCGAA	1 cut(s)	1586
Bsp143I	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
Bsp19I	CCATGG	2 cut(s)	307, 2002
BspACI	CCGC	8 cut(s)	303, 384, 770, 914, 1463, 1612, 2136, 2318
BspCNI	CTCAG	4 cut(s)	242, 312, 1009, 1572
BspFNI	CGCG	1 cut(s)	1465
BspHI	TCATGA	1 cut(s)	1888
BspMI	ACCTGC	1 cut(s)	836
BspOI	GCTAGC	1 cut(s)	914
BspPI	GGATC	4 cut(s)	433, 491, 794, 2006
BspT104I	TTCGAA	1 cut(s)	1586
BspT107I	GGYRCC	3 cut(s)	46, 605, 2046
BsrDI	GCAATG	1 cut(s)	840
BsrFI	RCCGGY	5 cut(s)	1191, 1286, 1333, 1391, 2357
BsrI	ACTGG	6 cut(s)	212, 364, 745, 1069, 1629, 1932
BssAI	RCCGGY	5 cut(s)	1191, 1286, 1333, 1391, 2357
BssECI	CCNNGG	6 cut(s)	307, 346, 1747, 1748, 2002, 2262
BssMI	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
BssNI	GRCGYC	3 cut(s)	1389, 1511, 1868
BssSI	CACGAG	1 cut(s)	2086
BssT1I	CCWWGG	2 cut(s)	307, 2002
Bst2BI	CACGAG	1 cut(s)	2086
Bst2UI	CCWGG	1 cut(s)	1749
Bst4CI	ACNGT	4 cut(s)	288, 700, 1418, 2426
Bst6I	CTCTTC	5 cut(s)	739, 941, 1121, 1359, 1573
BstACI	GRCGYC	3 cut(s)	1389, 1511, 1868
BstBI	TTCGAA	1 cut(s)	1586
BstC8I	GCNNGC	9 cut(s)	500, 912, 1193, 1288, 1610, 1986, 2134, 2316, 2333
BstDEI	CTNAG	5 cut(s)	229, 299, 996, 1559, 1733
BstDSI	CCRYGG	2 cut(s)	307, 2002
BstF5I	GGATG	4 cut(s)	276, 472, 755, 1161
BstFNI	CGCG	1 cut(s)	1465
BstH2I	RGCGCY	1 cut(s)	1683
BstHHI	GCGC	2 cut(s)	1682, 2422
BstKTI	GATC	8 cut(s)	141, 284, 441, 486, 789, 1813, 2014, 2236
BstMAI	GTCTC	2 cut(s)	1424, 2147
BstMBI	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
BstMCI	CGRYCG	1 cut(s)	100
BstMWI	GCNNNNNNNGC	6 cut(s)	381, 521, 1614, 1672, 2111, 2332
BstNI	CCWGG	1 cut(s)	1749
BstNSI	RCATGY	2 cut(s)	1780, 2335
BstSCI	CCNGG	3 cut(s)	346, 1442, 1747
BstSLI	GKGCMC	1 cut(s)	1677
BstUI	CGCG	1 cut(s)	1465
BstV1I	GCAGC	3 cut(s)	502, 1482, 1743
BstV2I	GAAGAC	2 cut(s)	1725, 1972
BstX2I	RGATCY	1 cut(s)	2011
BstYI	RGATCY	1 cut(s)	2011
BstZI	CGGCCG	1 cut(s)	97
BtgI	CCRYGG	2 cut(s)	307, 2002
BtgZI	GCGATG	2 cut(s)	310, 1394
BtrI	CACGTC	1 cut(s)	2098
BtsCI	GGATG	4 cut(s)	276, 472, 755, 1161
BtsI	GCAGTG	2 cut(s)	240, 1128
BtsIMutI	CAGTG	5 cut(s)	240, 463, 574, 753, 1128
BveI	ACCTGC	1 cut(s)	836
Cac8I	GCNNGC	9 cut(s)	500, 912, 1193, 1288, 1610, 1986, 2134, 2316, 2333
CciI	TCATGA	1 cut(s)	1888
CfoI	GCGC	2 cut(s)	1682, 2422
Cfr10I	RCCGGY	5 cut(s)	1191, 1286, 1333, 1391, 2357
Cfr13I	GGNCC	7 cut(s)	373, 387, 858, 992, 1744, 2079, 2162
CseI	GACGC	3 cut(s)	1397, 1519, 1857
CspCI	CAANNNNNGTGG	2 cut(s)	247, 282
DdeI	CTNAG	5 cut(s)	229, 299, 996, 1559, 1733
DpnI	GATC	8 cut(s)	140, 283, 440, 485, 788, 1812, 2013, 2235
DpnII	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
DraI	TTTAAA	2 cut(s)	1243, 1849
DriI	GACNNNNNGTC	1 cut(s)	2160
EaeI	YGGCCR	6 cut(s)	97, 190, 304, 793, 1189, 2355
EagI	CGGCCG	1 cut(s)	97
Eam1104I	CTCTTC	5 cut(s)	739, 941, 1121, 1359, 1573
Eam1105I	GACNNNNNGTC	1 cut(s)	2160
EarI	CTCTTC	5 cut(s)	739, 941, 1121, 1359, 1573
Ecl136II	GAGCTC	1 cut(s)	353
EclXI	CGGCCG	1 cut(s)	97
Eco130I	CCWWGG	2 cut(s)	307, 2002
Eco147I	AGGCCT	1 cut(s)	342
Eco24I	GRGCYC	4 cut(s)	355, 1233, 1541, 1629
Eco47I	GGWCC	4 cut(s)	387, 858, 1744, 2162
Eco52I	CGGCCG	1 cut(s)	97
Eco53kI	GAGCTC	1 cut(s)	353
Eco57I	CTGAAG	3 cut(s)	504, 1737, 1839
Eco88I	CYCGRG	2 cut(s)	1592, 2042
EcoICRI	GAGCTC	1 cut(s)	353
EcoRI	GAATTC	1 cut(s)	452
EcoRII	CCWGG	1 cut(s)	1747
EcoT14I	CCWWGG	2 cut(s)	307, 2002
EcoT38I	GRGCYC	4 cut(s)	355, 1233, 1541, 1629
ErhI	CCWWGG	2 cut(s)	307, 2002
Esp3I	CGTCTC	1 cut(s)	1424
FalI	AAGNNNNNCTT	4 cut(s)	1812, 1844, 2370, 2402
FaqI	GGGAC	1 cut(s)	1730
FauI	CCCGC	3 cut(s)	377, 763, 907
FbaI	TGATCA	1 cut(s)	1810
Fnu4HI	GCNGC	5 cut(s)	304, 516, 1471, 1757, 2319
FokI	GGATG	4 cut(s)	263, 479, 742, 1168
FriOI	GRGCYC	4 cut(s)	355, 1233, 1541, 1629
Fsp4HI	GCNGC	5 cut(s)	304, 516, 1471, 1757, 2319
FspI	TGCGCA	1 cut(s)	2421
GlaI	GCGC	2 cut(s)	1681, 2421
GluI	GCNGC	5 cut(s)	304, 516, 1471, 1757, 2319
GsaI	CCCAGC	1 cut(s)	840
GsuI	CTGGAG	1 cut(s)	1217
HaeII	RGCGCY	1 cut(s)	1683
HgaI	GACGC	3 cut(s)	1397, 1519, 1857
HhaI	GCGC	2 cut(s)	1682, 2422
Hin1I	GRCGYC	3 cut(s)	1389, 1511, 1868
Hin6I	GCGC	2 cut(s)	1680, 2420
HinP1I	GCGC	2 cut(s)	1680, 2420
HindIII	AAGCTT	3 cut(s)	161, 1789, 2285
HphI	GGTGA	5 cut(s)	862, 1193, 1348, 1391, 2372
Hpy166II	GTNNAC	3 cut(s)	291, 926, 1675
Hpy8I	GTNNAC	3 cut(s)	291, 926, 1675
Hpy99I	CGWCG	2 cut(s)	337, 2099
HpyAV	CCTTC	9 cut(s)	24, 208, 229, 262, 669, 1153, 1377, 1921, 2423
HpyCH4III	ACNGT	4 cut(s)	288, 700, 1418, 2426
HpyCH4IV	ACGT	3 cut(s)	1599, 2097, 2414
HpyF10VI	GCNNNNNNNGC	6 cut(s)	381, 521, 1614, 1672, 2111, 2332
HpyF3I	CTNAG	5 cut(s)	229, 299, 996, 1559, 1733
HpySE526I	ACGT	3 cut(s)	1599, 2097, 2414
Hsp92I	GRCGYC	3 cut(s)	1389, 1511, 1868
HspAI	GCGC	2 cut(s)	1680, 2420
KpnI	GGTACC	3 cut(s)	50, 609, 2050
KroI	GCCGGC	2 cut(s)	1191, 1286
KroNI	GCCGGC	2 cut(s)	1193, 1288
Ksp22I	TGATCA	1 cut(s)	1810
Kzo9I	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
Lsp1109I	GCAGC	3 cut(s)	502, 1482, 1743
LweI	GCATC	1 cut(s)	1691
MaeII	ACGT	3 cut(s)	1599, 2097, 2414
MaeIII	GTNAC	9 cut(s)	214, 458, 625, 1199, 1336, 1430, 1822, 2213, 2382
MalI	GATC	8 cut(s)	140, 283, 440, 485, 788, 1812, 2013, 2235
MboI	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
MfeI	CAATTG	1 cut(s)	2148
MflI	RGATCY	1 cut(s)	2011
MlsI	TGGCCA	2 cut(s)	192, 795
MluNI	TGGCCA	2 cut(s)	192, 795
MlyI	GAGTC	2 cut(s)	553, 1474
MmeI	TCCRAC	6 cut(s)	356, 414, 755, 1298, 2014, 2183
Mox20I	TGGCCA	2 cut(s)	192, 795
MroNI	GCCGGC	2 cut(s)	1191, 1286
MscI	TGGCCA	2 cut(s)	192, 795
MseI	TTAA	8 cut(s)	111, 642, 1005, 1214, 1242, 1830, 1848, 2411
MslI	CAYNNNNRTG	2 cut(s)	1920, 2096
Msp20I	TGGCCA	2 cut(s)	192, 795
MspA1I	CMGCKG	4 cut(s)	303, 384, 524, 2318
MspR9I	CCNGG	3 cut(s)	348, 1444, 1749
MunI	CAATTG	1 cut(s)	2148
MvaI	CCWGG	1 cut(s)	1749
MvnI	CGCG	1 cut(s)	1465
MwoI	GCNNNNNNNGC	6 cut(s)	381, 521, 1614, 1672, 2111, 2332
NaeI	GCCGGC	2 cut(s)	1193, 1288
NciI	CCSGG	2 cut(s)	348, 1444
NcoI	CCATGG	2 cut(s)	307, 2002
NdeII	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
NgoMIV	GCCGGC	2 cut(s)	1191, 1286
NheI	GCTAGC	1 cut(s)	910
NmeAIII	GCCGAG	2 cut(s)	384, 2287
NmuCI	GTSAC	6 cut(s)	458, 1199, 1336, 1430, 1822, 2382
NsbI	TGCGCA	1 cut(s)	2421
NspI	RCATGY	2 cut(s)	1780, 2335
NspV	TTCGAA	1 cut(s)	1586
OliI	CACNNNNGTG	1 cut(s)	2096
PaeI	GCATGC	1 cut(s)	2335
PaeR7I	CTCGAG	1 cut(s)	1592
PagI	TCATGA	1 cut(s)	1888
PasI	CCCWGGG	1 cut(s)	1748
PceI	AGGCCT	1 cut(s)	342
PdiI	GCCGGC	2 cut(s)	1193, 1288
PfeI	GAWTC	9 cut(s)	312, 1142, 1450, 1486, 1548, 1573, 1637, 1912, 2504
PflMI	CCANNNNNTGG	1 cut(s)	370
PkrI	GCNGC	5 cut(s)	305, 517, 1472, 1758, 2320
PleI	GAGTC	2 cut(s)	553, 1474
PpsI	GAGTC	2 cut(s)	553, 1474
PshBI	ATTAAT	1 cut(s)	642
Psp124BI	GAGCTC	1 cut(s)	355
Psp1406I	AACGTT	1 cut(s)	2414
Psp6I	CCWGG	1 cut(s)	1747
PspFI	CCCAGC	1 cut(s)	836
PspGI	CCWGG	1 cut(s)	1747
PspPI	GGNCC	7 cut(s)	373, 387, 858, 992, 1744, 2079, 2162
PsuI	RGATCY	1 cut(s)	2011
PvuII	CAGCTG	1 cut(s)	524
RseI	CAYNNNNRTG	2 cut(s)	1920, 2096
SacI	GAGCTC	1 cut(s)	355
SaqAI	TTAA	8 cut(s)	111, 642, 1005, 1214, 1242, 1830, 1848, 2411
SatI	GCNGC	5 cut(s)	304, 516, 1471, 1757, 2319
Sau3AI	GATC	8 cut(s)	138, 281, 438, 483, 786, 1810, 2011, 2233
Sau96I	GGNCC	7 cut(s)	373, 387, 858, 992, 1744, 2079, 2162
ScaI	AGTACT	4 cut(s)	30, 368, 545, 2351
SchI	GAGTC	2 cut(s)	553, 1474
ScrFI	CCNGG	3 cut(s)	348, 1444, 1749
SfaNI	GCATC	1 cut(s)	1691
Sfr274I	CTCGAG	1 cut(s)	1592
SfuI	TTCGAA	1 cut(s)	1586
SinI	GGWCC	4 cut(s)	387, 858, 1744, 2162
SlaI	CTCGAG	1 cut(s)	1592
SmiMI	CAYNNNNRTG	2 cut(s)	1920, 2096
SmlI	CTYRAG	4 cut(s)	8, 801, 1592, 2222
SmoI	CTYRAG	4 cut(s)	8, 801, 1592, 2222
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	2335
SseBI	AGGCCT	1 cut(s)	342
SsiI	CCGC	8 cut(s)	303, 384, 770, 914, 1463, 1612, 2136, 2318
SstI	GAGCTC	1 cut(s)	355
StuI	AGGCCT	1 cut(s)	342
StyD4I	CCNGG	3 cut(s)	346, 1442, 1747
StyI	CCWWGG	2 cut(s)	307, 2002
TaaI	ACNGT	4 cut(s)	288, 700, 1418, 2426
TaiI	ACGT	3 cut(s)	1602, 2100, 2417
TaqI	TCGA	9 cut(s)	486, 1453, 1535, 1546, 1571, 1586, 1593, 1651, 2124
TatI	WGTACW	7 cut(s)	28, 288, 366, 543, 925, 1008, 2349
TauI	GCSGC	2 cut(s)	306, 2321
TfiI	GAWTC	9 cut(s)	312, 1142, 1450, 1486, 1548, 1573, 1637, 1912, 2504
Tru1I	TTAA	8 cut(s)	111, 642, 1005, 1214, 1242, 1830, 1848, 2411
Tru9I	TTAA	8 cut(s)	111, 642, 1005, 1214, 1242, 1830, 1848, 2411
TscAI	CASTG	5 cut(s)	247, 463, 574, 753, 1128
TseFI	GTSAC	6 cut(s)	458, 1199, 1336, 1430, 1822, 2382
TseI	GCWGC	3 cut(s)	515, 1470, 1756
Tsp45I	GTSAC	6 cut(s)	458, 1199, 1336, 1430, 1822, 2382
TspDTI	ATGAA	8 cut(s)	64, 483, 1155, 1172, 1877, 1904, 1905, 2478
TspGWI	ACGGA	2 cut(s)	464, 2264
TspRI	CASTG	5 cut(s)	247, 463, 574, 753, 1128
Van91I	CCANNNNNTGG	1 cut(s)	370
VneI	GTGCAC	1 cut(s)	1673
VpaK11BI	GGWCC	4 cut(s)	387, 858, 1744, 2162
VspI	ATTAAT	1 cut(s)	642
XapI	RAATTY	5 cut(s)	400, 452, 1163, 1207, 1238
XbaI	TCTAGA	1 cut(s)	121
XceI	RCATGY	2 cut(s)	1780, 2335
XhoI	CTCGAG	1 cut(s)	1592
ZrmI	AGTACT	4 cut(s)	30, 368, 545, 2351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.