Rroxscaffold_3G00243190

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
35743112 .. 35746257
3146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00243190.1

Sequence Viewer

Length: 2019 bp
ATGTTTGTCAAACTTTCTGTTCTCCTAGTACTACTAGTGCTTCTGGAACTAGCAGAAGCCCAAGACCTCAGTTTCATCTACAATGATGGTTTCAACGGCCGTTCTGATCTTAATGTCAGTCTAGACGGCATAGCAGAGATCACACCAAAAGGTCTCTTGAAGCTTACAAACGACACCAAACAGAAAAGTGGCCATGCCTTCTACCCTAACCCAGTAACCTTCAAGAACTCGGAGAACGACACCGCTTTCTCCTTCTCCACCAACTTTGTCTTTGCCATCCGATCAGAGTACACTACTCTCAGCGGCCATGGAATCGCCTTTGTCATCGCTCCGACGAGAGGCCTCCCCGGAGCTCTGCCGAGCCAGTACTTGGGCCTGTTCAACGAGTCCAACGATGGGAATTTCACCAATCATGTTTTTGCTGTGGAGCTTGACACGATCCAGAGCACGGAATTCCAAGACATGAATGAAAACCATGTTGGGATCGACATCAATGGCTTACACTCTGTCAAAGCTGCTGCAGCTGGTTATTTTGATGGTCGATTTAAGAACCTGACTCTTTTCAGTGGTAAAGAAATGAGAGTTTGGGTTGAATATGATGGCACCAAGAAGCAAATTGAAGTTACTATGGCTCCAATTGATGTTGCAACTAAACCTTCAACTCCACTTTTGTCTTTGAAATATGACCTTTCCACAGTTCTCTACAAAACCATGTATGTTGGCTTTTCCTCTTCAACTGGTTCAGTGTTCACATCCCATTATGTAGTGGGTTGGAGCTTTAGGATCAATGGCCAAGCTCAAGACCTCATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTAAAAAGAGGTCCATGCTTTTCACCTTTGGTGTGCCTCTGATTTCAGTGAGTTTGGTTTTGCTAGCGGTTTCTGGTGTGCTTTATGTCATAAATAGGAAGAGGAAGTTTGCAGAAGTGCTTGAAGATTGGGAGCTAGAGTACGGTCCTCAGAGGTTTAAGTACAAAGAACTGTATATAGCCACCAAAGGGTTTAGGGAAAAGGAGCTTTTGGGAACTGGGGGATTTGGTAAAGTTTATAGAGGTTTATTACCCTCTAAAATTGAGATTGGAGTGAAGAGGGTCTCACATGAATCAAGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGTAATTTAGTACAACTGTTGGGATATTGCAGGCGAAAAGGGGAGCTGCTTTTGGTCTATGATTACATGGCTAATGGAAGCTTGGACAAATACCTCTATGATCAACCTGAAGTGACCCTTAATTGGAACCAGAGGTTTAAAGTCATCAAAGGTGTGGCGTCAGGGTTGTTCTATCTTCATGAAGAATGGGAACAGGTTGTGATTCATAGAGATGTAAAGGCCAGTAATGTGTTGCTAGATGGGGAATTGAATGGAAGACTAGGAGATTTCGGGCTTGCAAGATTATACGACCATGGAACAGATCCTCAAACTACTCATATAGTTGGAACACTCGGGTACCTAGCCCCAGAGCACACAAGAACAGGTCGGGCCACCACGAGCACCGACGTGTTTGCTTTTGGGGCATTTTTGCTCGAAGTTGCTTGCGGAAAAAGGCCAATTGAGACACAGGGTCCAGAAAATGTGATTTTGGTTGATTGGGTGTTTTCTTGTTGGAATAGAAGTAACATTCTTGAGGCAAGAGATCAGAGCTTTGGTACGGATTTTGTAGCCGAGGAAGTGGAGTTGGTGTTGAAGCTCGGGCTTTTGTGCTCTCATTCGGAGCCAGCGGCAAGGCCAAGCATGCGACAAGTCGTTCAGTACTTGGCCGGTGATGTTGCTTTGCCGGAAGTGTCACTTCTTGGGCTTTCTTCTAGTGGCTTAACGTTTGCGCACCATGAAGGTTTTGATGACTATGCTATGTCATATCAGTCTTCTTTAGGCACTAGGTTCTCCCATTCATCATATATTGCAGAATCGGCACTACTTTCAGGTGGTCGTTGA

Protein Analysis

672

Amino Acids

74.62

Weight (kDa)

6.41

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 275 7.5e-85 Legume lectin domain
Lectin_L-type_dom PF18483 42 - 253 2e-08 Legume lectin beta-barrel domain
Pkinase PF00069 346 - 612 2.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 349 - 614 4.2e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1908
Acc36I ACCTGC 1 cut(s) 833
Acc65I GGTACC 1 cut(s) 1533
AccB1I GGYRCC 2 cut(s) 602, 1533
AccB7I CCANNNNNTGG 1 cut(s) 370
AciI CCGC 5 cut(s) 243, 303, 911, 1623, 1805
AclI AACGTT 1 cut(s) 1901
AclWI GGATC 4 cut(s) 433, 491, 791, 1493
AcoI YGGCCR 6 cut(s) 97, 190, 304, 790, 1183, 1842
AcsI RAATTY 3 cut(s) 400, 452, 1157
AcuI CTGAAG 1 cut(s) 1326
AcyI GRCGYC 1 cut(s) 1355
AfaI GTAC 9 cut(s) 30, 290, 368, 986, 1007, 1209, 1535, 1735, 1838
AfiI CCNNNNNNNGG 6 cut(s) 338, 370, 396, 448, 1032, 1320
AflIII ACRYGT 1 cut(s) 1584
AhdI GACNNNNNGTC 1 cut(s) 1647
AhlI ACTAGT 1 cut(s) 34
AjiI CACGTC 1 cut(s) 1585
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 1583
Alw21I GWGCWC 5 cut(s) 355, 449, 1551, 1580, 1790
Alw26I GTCTC 3 cut(s) 158, 1132, 1634
AlwI GGATC 4 cut(s) 433, 491, 791, 1493
Ama87I CYCGRG 2 cut(s) 1529, 1775
ApeKI GCWGC 4 cut(s) 515, 518, 521, 1243
ApoI RAATTY 3 cut(s) 400, 452, 1157
Asp718I GGTACC 1 cut(s) 1533
AspLEI GCGC 1 cut(s) 1909
AspS9I GGNCC 5 cut(s) 373, 855, 989, 1566, 1649
AsuC2I CCSGG 1 cut(s) 348
AsuHPI GGTGA 4 cut(s) 397, 859, 1187, 1859
AsuNHI GCTAGC 1 cut(s) 907
AvaI CYCGRG 2 cut(s) 1529, 1775
AvaII GGWCC 3 cut(s) 855, 989, 1649
BaeI ACNNNNGTAYC 2 cut(s) 1517, 1550
BalI TGGCCA 2 cut(s) 192, 792
BanI GGYRCC 2 cut(s) 602, 1533
BanII GRGCYC 1 cut(s) 355
BauI CACGAG 1 cut(s) 1573
BbsI GAAGAC 2 cut(s) 1459, 1941
Bbv12I GWGCWC 5 cut(s) 355, 449, 1551, 1580, 1790
BbvI GCAGC 4 cut(s) 502, 505, 533, 1230
BccI CCATC 6 cut(s) 80, 284, 389, 530, 593, 1430
BceAI ACGGC 3 cut(s) 84, 112, 142
BcgI CGANNNNNNTGC 2 cut(s) 1571, 1605
BclI TGATCA 1 cut(s) 1297
BcnI CCSGG 1 cut(s) 348
BcoDI GTCTC 3 cut(s) 158, 1132, 1634
BcuI ACTAGT 1 cut(s) 34
BfmI CTRYAG 1 cut(s) 519
BfuAI ACCTGC 1 cut(s) 833
BisI GCNGC 6 cut(s) 304, 516, 519, 522, 1244, 1806
BlsI GCNGC 6 cut(s) 305, 517, 520, 523, 1245, 1807
BmcAI AGTACT 3 cut(s) 30, 368, 1838
Bme1390I CCNGG 1 cut(s) 348
Bme18I GGWCC 3 cut(s) 855, 989, 1649
BmeRI GACNNNNNGTC 1 cut(s) 1647
BmeT110I CYCGRG 2 cut(s) 1529, 1775
BmgBI CACGTC 1 cut(s) 1585
BmgT120I GGNCC 5 cut(s) 373, 855, 989, 1566, 1649
BmiI GGNNCC 6 cut(s) 604, 633, 1325, 1535, 1650, 1800
BmrFI CCNGG 1 cut(s) 348
BmrI ACTGGG 2 cut(s) 206, 1071
BmtI GCTAGC 1 cut(s) 911
BmuI ACTGGG 2 cut(s) 206, 1071
BpiI GAAGAC 2 cut(s) 1459, 1941
BpuEI CTTGAG 2 cut(s) 783, 1730
BpuMI CCSGG 1 cut(s) 348
BsaBI GATNNNNATC 1 cut(s) 488
BsaHI GRCGYC 1 cut(s) 1355
BsaI GGTCTC 2 cut(s) 158, 1132
BsaJI CCNNGG 4 cut(s) 307, 346, 1489, 1749
BsaXI ACNNNNNCTCC 6 cut(s) 616, 646, 968, 998, 1751, 1781
Bsc4I CCNNNNNNNGG 6 cut(s) 338, 370, 396, 448, 1032, 1320
Bse118I RCCGGY 2 cut(s) 1185, 1844
Bse1I ACTGG 5 cut(s) 212, 364, 742, 1066, 1419
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 488
BseDI CCNNGG 4 cut(s) 307, 346, 1489, 1749
BseGI GGATG 3 cut(s) 276, 752, 1155
BseJI GATNNNNATC 1 cut(s) 488
BseLI CCNNNNNNNGG 6 cut(s) 338, 370, 396, 448, 1032, 1320
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 3 cut(s) 82, 313, 1007
BseNI ACTGG 5 cut(s) 212, 364, 742, 1066, 1419
BseX3I CGGCCG 1 cut(s) 97
BseXI GCAGC 4 cut(s) 502, 505, 533, 1230
Bsh1285I CGRYCG 1 cut(s) 100
BshNI GGYRCC 2 cut(s) 602, 1533
BsiEI CGRYCG 1 cut(s) 100
BsiHKAI GWGCWC 5 cut(s) 355, 449, 1551, 1580, 1790
BsiHKCI CYCGRG 2 cut(s) 1529, 1775
BsiSI CCGG 4 cut(s) 348, 1186, 1845, 1862
BslI CCNNNNNNNGG 6 cut(s) 338, 370, 396, 448, 1032, 1320
BsmAI GTCTC 3 cut(s) 158, 1132, 1634
Bso31I GGTCTC 2 cut(s) 158, 1132
BsoBI CYCGRG 2 cut(s) 1529, 1775
Bsp1286I GDGCHC 5 cut(s) 355, 449, 1551, 1580, 1790
Bsp143I GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
Bsp19I CCATGG 2 cut(s) 307, 1489
BspACI CCGC 5 cut(s) 243, 303, 911, 1623, 1805
BspCNI CTCAG 3 cut(s) 81, 312, 1006
BspHI TCATGA 1 cut(s) 1375
BspLI GGNNCC 6 cut(s) 604, 633, 1325, 1535, 1650, 1800
BspMAI CTGCAG 1 cut(s) 523
BspMI ACCTGC 1 cut(s) 833
BspOI GCTAGC 1 cut(s) 911
BspPI GGATC 4 cut(s) 433, 491, 791, 1493
BspT107I GGYRCC 2 cut(s) 602, 1533
BspTNI GGTCTC 2 cut(s) 158, 1132
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 2 cut(s) 1185, 1844
BsrI ACTGG 5 cut(s) 212, 364, 742, 1066, 1419
BssAI RCCGGY 2 cut(s) 1185, 1844
BssECI CCNNGG 4 cut(s) 307, 346, 1489, 1749
BssMI GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
BssNI GRCGYC 1 cut(s) 1355
BssSI CACGAG 1 cut(s) 1573
BssT1I CCWWGG 2 cut(s) 307, 1489
Bst2BI CACGAG 1 cut(s) 1573
Bst4CI ACNGT 5 cut(s) 697, 989, 1017, 1199, 1215
Bst6I CTCTTC 3 cut(s) 736, 938, 1115
BstACI GRCGYC 1 cut(s) 1355
BstC8I GCNNGC 7 cut(s) 909, 1187, 1229, 1473, 1621, 1803, 1820
BstDEI CTNAG 3 cut(s) 68, 299, 993
BstDSI CCRYGG 2 cut(s) 307, 1489
BstF5I GGATG 3 cut(s) 276, 752, 1155
BstHHI GCGC 1 cut(s) 1909
BstKTI GATC 9 cut(s) 109, 141, 284, 441, 486, 786, 1300, 1501, 1723
BstMAI GTCTC 3 cut(s) 158, 1132, 1634
BstMBI GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
BstMCI CGRYCG 1 cut(s) 100
BstMWI GCNNNNNNNGC 4 cut(s) 521, 1598, 1819, 1994
BstNSI RCATGY 1 cut(s) 1822
BstSCI CCNGG 1 cut(s) 346
BstSFI CTRYAG 1 cut(s) 519
BstV1I GCAGC 4 cut(s) 502, 505, 533, 1230
BstV2I GAAGAC 2 cut(s) 1459, 1941
BstX2I RGATCY 1 cut(s) 1498
BstYI RGATCY 1 cut(s) 1498
BstZI CGGCCG 1 cut(s) 97
BtgI CCRYGG 2 cut(s) 307, 1489
BtgZI GCGATG 1 cut(s) 310
BtrI CACGTC 1 cut(s) 1585
BtsCI GGATG 3 cut(s) 276, 752, 1155
BtsIMutI CAGTG 3 cut(s) 571, 750, 897
BveI ACCTGC 1 cut(s) 833
Cac8I GCNNGC 7 cut(s) 909, 1187, 1229, 1473, 1621, 1803, 1820
CciI TCATGA 1 cut(s) 1375
CfoI GCGC 1 cut(s) 1909
Cfr10I RCCGGY 2 cut(s) 1185, 1844
Cfr13I GGNCC 5 cut(s) 373, 855, 989, 1566, 1649
CseI GACGC 1 cut(s) 1344
Csp6I GTAC 9 cut(s) 29, 289, 367, 985, 1006, 1208, 1534, 1734, 1837
CspCI CAANNNNNGTGG 2 cut(s) 247, 282
CviQI GTAC 9 cut(s) 29, 289, 367, 985, 1006, 1208, 1534, 1734, 1837
DdeI CTNAG 3 cut(s) 68, 299, 993
DpnI GATC 9 cut(s) 108, 140, 283, 440, 485, 785, 1299, 1500, 1722
DpnII GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
DraI TTTAAA 1 cut(s) 1336
DriI GACNNNNNGTC 1 cut(s) 1647
EaeI YGGCCR 6 cut(s) 97, 190, 304, 790, 1183, 1842
EagI CGGCCG 1 cut(s) 97
Eam1104I CTCTTC 3 cut(s) 736, 938, 1115
Eam1105I GACNNNNNGTC 1 cut(s) 1647
EarI CTCTTC 3 cut(s) 736, 938, 1115
Ecl136II GAGCTC 1 cut(s) 353
EclXI CGGCCG 1 cut(s) 97
Eco130I CCWWGG 2 cut(s) 307, 1489
Eco147I AGGCCT 1 cut(s) 342
Eco24I GRGCYC 1 cut(s) 355
Eco31I GGTCTC 2 cut(s) 158, 1132
Eco47I GGWCC 3 cut(s) 855, 989, 1649
Eco52I CGGCCG 1 cut(s) 97
Eco53kI GAGCTC 1 cut(s) 353
Eco57I CTGAAG 1 cut(s) 1326
Eco88I CYCGRG 2 cut(s) 1529, 1775
EcoICRI GAGCTC 1 cut(s) 353
EcoRI GAATTC 1 cut(s) 452
EcoT14I CCWWGG 2 cut(s) 307, 1489
EcoT38I GRGCYC 1 cut(s) 355
ErhI CCWWGG 2 cut(s) 307, 1489
FalI AAGNNNNNCTT 4 cut(s) 1299, 1331, 1857, 1889
FbaI TGATCA 1 cut(s) 1297
Fnu4HI GCNGC 6 cut(s) 304, 516, 519, 522, 1244, 1806
FokI GGATG 3 cut(s) 263, 739, 1162
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 6 cut(s) 304, 516, 519, 522, 1244, 1806
FspI TGCGCA 1 cut(s) 1908
GlaI GCGC 1 cut(s) 1908
GluI GCNGC 6 cut(s) 304, 516, 519, 522, 1244, 1806
HapII CCGG 4 cut(s) 348, 1186, 1845, 1862
HgaI GACGC 1 cut(s) 1344
HhaI GCGC 1 cut(s) 1909
Hin1I GRCGYC 1 cut(s) 1355
Hin6I GCGC 1 cut(s) 1907
HinP1I GCGC 1 cut(s) 1907
HindIII AAGCTT 2 cut(s) 161, 1276
HinfI GANTC 6 cut(s) 312, 386, 556, 1136, 1399, 1991
HpaII CCGG 4 cut(s) 348, 1186, 1845, 1862
HphI GGTGA 4 cut(s) 397, 859, 1187, 1859
Hpy166II GTNNAC 2 cut(s) 291, 750
Hpy188I TCNGA 9 cut(s) 106, 232, 281, 286, 333, 885, 996, 1725, 1798
Hpy8I GTNNAC 2 cut(s) 291, 750
Hpy99I CGWCG 2 cut(s) 337, 1586
HpyAV CCTTC 6 cut(s) 208, 229, 262, 666, 1147, 1910
HpyCH4III ACNGT 5 cut(s) 697, 989, 1017, 1199, 1215
HpyCH4IV ACGT 2 cut(s) 1584, 1901
HpyCH4V TGCA 7 cut(s) 521, 647, 842, 956, 1227, 1475, 1988
HpyF10VI GCNNNNNNNGC 4 cut(s) 521, 1598, 1819, 1994
HpyF3I CTNAG 3 cut(s) 68, 299, 993
HpySE526I ACGT 2 cut(s) 1584, 1901
Hsp92I GRCGYC 1 cut(s) 1355
HspAI GCGC 1 cut(s) 1907
KpnI GGTACC 1 cut(s) 1537
KroI GCCGGC 1 cut(s) 1185
KroNI GCCGGC 1 cut(s) 1187
Ksp22I TGATCA 1 cut(s) 1297
Kzo9I GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
LmnI GCTCC 9 cut(s) 334, 350, 427, 637, 774, 976, 1048, 1240, 1798
Lsp1109I GCAGC 4 cut(s) 502, 505, 533, 1230
MaeII ACGT 2 cut(s) 1584, 1901
MaeIII GTNAC 6 cut(s) 214, 622, 1193, 1309, 1700, 1869
MalI GATC 9 cut(s) 108, 140, 283, 440, 485, 785, 1299, 1500, 1722
MboI GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
MboII GAAGA 9 cut(s) 723, 955, 980, 1132, 1364, 1391, 1464, 1878, 1941
MfeI CAATTG 2 cut(s) 636, 1635
MflI RGATCY 1 cut(s) 1498
MhlI GDGCHC 5 cut(s) 355, 449, 1551, 1580, 1790
MlsI TGGCCA 2 cut(s) 192, 792
MluNI TGGCCA 2 cut(s) 192, 792
MlyI GAGTC 2 cut(s) 395, 550
MmeI TCCRAC 5 cut(s) 356, 414, 752, 1501, 1670
Mox20I TGGCCA 2 cut(s) 192, 792
MroNI GCCGGC 1 cut(s) 1185
MscI TGGCCA 2 cut(s) 192, 792
MseI TTAA 6 cut(s) 111, 546, 1002, 1317, 1335, 1898
MslI CAYNNNNRTG 2 cut(s) 1407, 1583
Msp20I TGGCCA 2 cut(s) 192, 792
MspA1I CMGCKG 3 cut(s) 303, 524, 1805
MspI CCGG 4 cut(s) 348, 1186, 1845, 1862
MspR9I CCNGG 1 cut(s) 348
MunI CAATTG 2 cut(s) 636, 1635
MwoI GCNNNNNNNGC 4 cut(s) 521, 1598, 1819, 1994
NaeI GCCGGC 1 cut(s) 1187
NciI CCSGG 1 cut(s) 348
NcoI CCATGG 2 cut(s) 307, 1489
NdeII GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
NgoMIV GCCGGC 1 cut(s) 1185
NheI GCTAGC 1 cut(s) 907
NlaIV GGNNCC 6 cut(s) 604, 633, 1325, 1535, 1650, 1800
NmeAIII GCCGAG 2 cut(s) 384, 1774
NmuCI GTSAC 3 cut(s) 1193, 1309, 1869
NsbI TGCGCA 1 cut(s) 1908
NspI RCATGY 1 cut(s) 1822
OliI CACNNNNGTG 1 cut(s) 1583
PaeI GCATGC 1 cut(s) 1822
PagI TCATGA 1 cut(s) 1375
PceI AGGCCT 1 cut(s) 342
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PdiI GCCGGC 1 cut(s) 1187
PfeI GAWTC 4 cut(s) 312, 1136, 1399, 1991
PflMI CCANNNNNTGG 1 cut(s) 370
PkrI GCNGC 6 cut(s) 305, 517, 520, 523, 1245, 1807
PleI GAGTC 2 cut(s) 394, 550
PpsI GAGTC 2 cut(s) 394, 550
Psp124BI GAGCTC 1 cut(s) 355
Psp1406I AACGTT 1 cut(s) 1901
PspN4I GGNNCC 6 cut(s) 604, 633, 1325, 1535, 1650, 1800
PspPI GGNCC 5 cut(s) 373, 855, 989, 1566, 1649
PstI CTGCAG 1 cut(s) 523
PsuI RGATCY 1 cut(s) 1498
PvuII CAGCTG 1 cut(s) 524
RsaI GTAC 9 cut(s) 30, 290, 368, 986, 1007, 1209, 1535, 1735, 1838
RsaNI GTAC 9 cut(s) 29, 289, 367, 985, 1006, 1208, 1534, 1734, 1837
RseI CAYNNNNRTG 2 cut(s) 1407, 1583
SacI GAGCTC 1 cut(s) 355
SaqAI TTAA 6 cut(s) 111, 546, 1002, 1317, 1335, 1898
SatI GCNGC 6 cut(s) 304, 516, 519, 522, 1244, 1806
Sau3AI GATC 9 cut(s) 106, 138, 281, 438, 483, 783, 1297, 1498, 1720
Sau96I GGNCC 5 cut(s) 373, 855, 989, 1566, 1649
ScaI AGTACT 3 cut(s) 30, 368, 1838
SchI GAGTC 2 cut(s) 395, 550
ScrFI CCNGG 1 cut(s) 348
SduI GDGCHC 5 cut(s) 355, 449, 1551, 1580, 1790
SfcI CTRYAG 1 cut(s) 519
SinI GGWCC 3 cut(s) 855, 989, 1649
SmiMI CAYNNNNRTG 2 cut(s) 1407, 1583
SmlI CTYRAG 2 cut(s) 798, 1709
SmoI CTYRAG 2 cut(s) 798, 1709
SpeI ACTAGT 1 cut(s) 34
SphI GCATGC 1 cut(s) 1822
SseBI AGGCCT 1 cut(s) 342
SsiI CCGC 5 cut(s) 243, 303, 911, 1623, 1805
SstI GAGCTC 1 cut(s) 355
StuI AGGCCT 1 cut(s) 342
StyD4I CCNGG 1 cut(s) 346
StyI CCWWGG 2 cut(s) 307, 1489
TaaI ACNGT 5 cut(s) 697, 989, 1017, 1199, 1215
TaiI ACGT 2 cut(s) 1587, 1904
TaqI TCGA 3 cut(s) 486, 541, 1611
TatI WGTACW 6 cut(s) 28, 288, 366, 1005, 1207, 1836
TauI GCSGC 2 cut(s) 306, 1808
TfiI GAWTC 4 cut(s) 312, 1136, 1399, 1991
Tru1I TTAA 6 cut(s) 111, 546, 1002, 1317, 1335, 1898
Tru9I TTAA 6 cut(s) 111, 546, 1002, 1317, 1335, 1898
TscAI CASTG 3 cut(s) 571, 750, 897
TseFI GTSAC 3 cut(s) 1193, 1309, 1869
TseI GCWGC 4 cut(s) 515, 518, 521, 1243
Tsp45I GTSAC 3 cut(s) 1193, 1309, 1869
TspGWI ACGGA 2 cut(s) 464, 1751
TspRI CASTG 3 cut(s) 571, 750, 897
Van91I CCANNNNNTGG 1 cut(s) 370
VpaK11BI GGWCC 3 cut(s) 855, 989, 1649
XapI RAATTY 3 cut(s) 400, 452, 1157
XbaI TCTAGA 1 cut(s) 121
XceI RCATGY 1 cut(s) 1822
ZrmI AGTACT 3 cut(s) 30, 368, 1838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.