RchiOBHm_Chr7g0189621

L-type lectin-domain containing receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000256
Physical Location & Seq
Forward (+)
8917501 .. 8919746
2246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16936

Sequence Viewer

Length: 1983 bp
ATGTTTTTCAAGCTTGTAATAATTCTCGTAGTTATTGTCGTAGCAGCAGCTGAAGATATCAGCTTCATTTACAATGGTTTCGAGTCTGGTGTAGATATTTGGCAAGATGGCCCCAGAGGGGGAGTCATGGTTGATGGTTTATTGAGAATAAGGCAACGAGCGAGTCATACCTTCTACGCCAAGCCAGTAACCTTCAAAAATGACTCATCATCCGGTTCAGAAGTTTTCTCCTTCTCTACCACTTTCGTCTTCGCTATCAGATCAGAATACAAAACTCTCAGCGGCCATGGACTCGCCTTTGTTATCTCTCCAACTCTAGGACGTCCCGGAGCTCTTCCAAGCCAGTACTTGGGCCTTTTCAATGCCTCCAACAATGGGAATATGAGCAATCATGTTTTTGCTGTGGAGCTGGACACGATTCAGAGCGCTGAGTTCAATGACATCAATGAAAATCATGTTGGGATCGACATCAATGGATTGGACTCTGTAAAGTCAGCAACAGCAGGATACTACGTTAAGGACGGAAGGTACCCAAGGAAATTGAGCCTCATCAGTGGTAATCCAATGAAAGTTTGGGTCGAATATGATGGTACCCGGAAGCAAATTAATGTTACTTTGGCTCCGATTAATGTTGGTAAGAAACCCCGAATTCCACTCTTGTCTTTAAAATATGACCTTTCCCCAGTTCTTAACAAAATTATGTATGTTGGCTTCTCCGCATCCACCGGCTCAATTAAAACATTCCATTATATTTTGGGCTGGAGCTTTAGGATGAATGGCCAAGCTCAAGAACTTGTTCCTTCACAGCTTCCCAAATTGCCTAGTATAGGAGACAAGAAAGTGTCTAAACTTCTGACCTTTGGTGTGCCTGTGATGGCTGTGAGTTTAGTTTTGCTAGCGATTTGTCTTGTGGTTTTTGTCATGAGAAGGAAGAAGTACGCAGAACTACTTGAAGATTGGGAGCTCGAGTATGGGCCTCAAAGGTTTAAATACGAAGAATTGTATAAAGCCACTAAAGGGTTTGGAAAGGAAGTGCTCTTGGGTGTTGGGGGATTTGGTGAGGTCTATAGAGGTATCTTACCCACCTCTAAGATTGAGATCGCTGTGAAGAGGGTTTCGCATAAATCAAGACAGGGAATAAAGGAATTTGTAGCCGAAATTGTTAGCCTTGGCCGGCTTCGTCACCGGAATTTAGTACAACTCTTGGGCTATTGCAGGCGAAATGGTGAACTACTTTTGGTTTATGACTACATGCCTAATGGTAGCTTGGAAAAGTACCTCTATAACCAACCGAAGATTACTCTAAACTGGAGTCGGAGGTTTAGAGTCATCAAAGGTGTGGCTTCAGGGTTGTTTTATCTTCATGAAGAGTGGGAACAAGTAGTAATTCACAGAGATGTGAAGGCTAGCAATGTGCTACTAGACCAGGAATTGAATGGAAGACTAGGAGATTTTGGACTTGCAAGATTATGTGCCCATGGGACAGACCATCAAACTACTCATGTAGCTGGCACACTTGGGTATTTAGCCCCGGAGCATGCAAGAACTGGTCGGGCCACCACGAGCACAGACGTGTTTGCTTTCGGGGCATTTTTGCTCGAAGTTGCCTGTGGAAGAAGGCCAATAGAGACACAAGGACCAGAGGAGGATATCATTTTGGCTGATCGGGTTTTCTTGTGTTGGAATAAAGGTAATATTCTAGAGGCAAGAGATCAAAACTTGGGTAACGATTTTGTAGTTGAGGAAGTGGAATTGGTGCTGAAGCTTGCGTTGTTGTGCTCTCGTTCACCGCCTGTAGCTAGGCCAAGCATGCGACAAGTGATGCAGTATTTGGACGGTGATATTGCTCTCCCGGAGTTGTCACTTCTTCGGCTCTCTTCAAGTGGTTCAGCATTTGCGCAAGTTGAAGGTTCTGAGGATGTTGAAATGGCATATAAGTGTTCATACGTTCCAGAGTCGACCCTCCTCTCAGGTGGTCGCTGA

Protein Analysis

660

Amino Acids

73.38

Weight (kDa)

8.77

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 20 - 271 3.3e-75 Legume lectin domain
Pkinase PF00069 344 - 609 1.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 346 - 549 5.8e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 325
Acc16I TGCGCA 1 cut(s) 1899
Acc65I GGTACC 2 cut(s) 528, 590
AccB1I GGYRCC 2 cut(s) 528, 590
AccB7I CCANNNNNTGG 1 cut(s) 349
AccI GTMKAC 1 cut(s) 1958
AciI CCGC 3 cut(s) 282, 717, 1790
AclWI GGATC 1 cut(s) 470
AcoI YGGCCR 3 cut(s) 283, 778, 1171
AcsI RAATTY 3 cut(s) 648, 1145, 1189
AcuI CTGAAG 3 cut(s) 72, 1329, 1781
AcyI GRCGYC 1 cut(s) 322
AfaI GTAC 6 cut(s) 347, 530, 592, 938, 1197, 1277
AfeI AGCGCT 1 cut(s) 427
AfiI CCNNNNNNNGG 7 cut(s) 118, 119, 317, 349, 375, 827, 1017
AflIII ACRYGT 1 cut(s) 1572
AgsI TTSAA 9 cut(s) 10, 196, 361, 436, 953, 1435, 1881, 1907, 1925
AjiI CACGTC 1 cut(s) 1573
AjnI CCWGG 1 cut(s) 1425
AjuI GAANNNNNNNTTGG 2 cut(s) 441, 473
AleI CACNNNNGTG 1 cut(s) 1571
Alw21I GWGCWC 5 cut(s) 334, 966, 1038, 1568, 1781
Alw26I GTCTC 2 cut(s) 825, 1622
AlwI GGATC 1 cut(s) 470
AlwNI CAGNNNCTG 1 cut(s) 50
Ama87I CYCGRG 1 cut(s) 965
Aor51HI AGCGCT 1 cut(s) 427
AoxI GGCC 9 cut(s) 109, 283, 352, 778, 974, 1171, 1554, 1619, 1802
ApeKI GCWGC 2 cut(s) 44, 47
ApoI RAATTY 3 cut(s) 648, 1145, 1189
AseI ATTAAT 2 cut(s) 606, 627
Asp700I GAANNNNTTC 1 cut(s) 795
Asp718I GGTACC 2 cut(s) 528, 590
AspLEI GCGC 2 cut(s) 428, 1900
AspS9I GGNCC 5 cut(s) 110, 352, 974, 1554, 1637
AsuC2I CCSGG 4 cut(s) 327, 595, 1532, 1853
AsuHPI GGTGA 5 cut(s) 1070, 1175, 1238, 1779, 1850
AsuNHI GCTAGC 2 cut(s) 895, 1406
AvaI CYCGRG 1 cut(s) 965
AvaII GGWCC 1 cut(s) 1637
BaeGI GKGCMC 1 cut(s) 1477
BalI TGGCCA 1 cut(s) 780
BanI GGYRCC 2 cut(s) 528, 590
BanII GRGCYC 2 cut(s) 334, 966
BarI GAAGNNNNNNTAC 2 cut(s) 695, 727
BauI CACGAG 1 cut(s) 1561
BbsI GAAGAC 2 cut(s) 241, 1447
Bbv12I GWGCWC 5 cut(s) 334, 966, 1038, 1568, 1781
BbvI GCAGC 2 cut(s) 56, 59
BccI CCATC 5 cut(s) 101, 128, 581, 868, 1497
BciT130I CCWGG 1 cut(s) 1427
BciVI GTATCC 1 cut(s) 500
BcnI CCSGG 4 cut(s) 327, 595, 1532, 1853
BcoDI GTCTC 2 cut(s) 825, 1622
BfaI CTAG 8 cut(s) 317, 822, 896, 1407, 1421, 1445, 1700, 1800
BfmI CTRYAG 2 cut(s) 1066, 1794
BfoI RGCGCY 1 cut(s) 429
BfuI GTATCC 1 cut(s) 500
BisI GCNGC 3 cut(s) 45, 48, 283
BlsI GCNGC 3 cut(s) 46, 49, 284
BmcAI AGTACT 1 cut(s) 347
Bme1390I CCNGG 5 cut(s) 327, 595, 1427, 1532, 1853
Bme18I GGWCC 1 cut(s) 1637
BmeT110I CYCGRG 1 cut(s) 965
BmgBI CACGTC 1 cut(s) 1573
BmgT120I GGNCC 5 cut(s) 110, 352, 974, 1554, 1637
BmiI GGNNCC 4 cut(s) 112, 530, 592, 621
BmrFI CCNGG 5 cut(s) 327, 595, 1427, 1532, 1853
BmrI ACTGGG 1 cut(s) 677
BmsI GCATC 2 cut(s) 728, 1812
BmtI GCTAGC 2 cut(s) 899, 1410
BmuI ACTGGG 1 cut(s) 677
BpiI GAAGAC 2 cut(s) 241, 1447
BpmI CTGGAG 2 cut(s) 781, 1330
BpuEI CTTGAG 1 cut(s) 771
BpuMI CCSGG 4 cut(s) 327, 595, 1532, 1853
BsaBI GATNNNNATC 2 cut(s) 467, 1097
BsaHI GRCGYC 1 cut(s) 322
BsaJI CCNNGG 5 cut(s) 286, 533, 1168, 1477, 1530
BsaWI WCCGGW 2 cut(s) 212, 1185
BsaXI ACNNNNNCTCC 6 cut(s) 114, 144, 604, 634, 953, 983
Bsc4I CCNNNNNNNGG 7 cut(s) 118, 119, 317, 349, 375, 827, 1017
Bse118I RCCGGY 2 cut(s) 725, 1173
Bse1I ACTGG 5 cut(s) 185, 343, 683, 1313, 1552
Bse3DI GCAATG 1 cut(s) 1417
Bse8I GATNNNNATC 2 cut(s) 467, 1097
BseBI CCWGG 1 cut(s) 1427
BseDI CCNNGG 5 cut(s) 286, 533, 1168, 1477, 1530
BseGI GGATG 4 cut(s) 209, 719, 777, 1924
BseJI GATNNNNATC 2 cut(s) 467, 1097
BseLI CCNNNNNNNGG 7 cut(s) 118, 119, 317, 349, 375, 827, 1017
BseMI GCAATG 1 cut(s) 1417
BseMII CTCAG 4 cut(s) 292, 420, 1905, 1983
BseNI ACTGG 5 cut(s) 185, 343, 683, 1313, 1552
BseRI GAGGAG 2 cut(s) 1658, 1955
BseSI GKGCMC 1 cut(s) 1477
BseXI GCAGC 2 cut(s) 56, 59
BshFI GGCC 9 cut(s) 111, 285, 354, 780, 976, 1173, 1556, 1621, 1804
BshNI GGYRCC 2 cut(s) 528, 590
BsiHKAI GWGCWC 5 cut(s) 334, 966, 1038, 1568, 1781
BsiHKCI CYCGRG 1 cut(s) 965
BsiSI CCGG 8 cut(s) 213, 327, 595, 726, 1174, 1186, 1532, 1853
BslFI GGGAC 2 cut(s) 309, 1495
BslI CCNNNNNNNGG 7 cut(s) 118, 119, 317, 349, 375, 827, 1017
BsmAI GTCTC 2 cut(s) 825, 1622
BsmFI GGGAC 2 cut(s) 309, 1495
BsnI GGCC 9 cut(s) 111, 285, 354, 780, 976, 1173, 1556, 1621, 1804
BsoBI CYCGRG 1 cut(s) 965
Bsp1286I GDGCHC 6 cut(s) 334, 966, 1038, 1477, 1568, 1781
Bsp143I GATC 5 cut(s) 260, 462, 1098, 1663, 1711
Bsp19I CCATGG 2 cut(s) 286, 1477
BspACI CCGC 3 cut(s) 282, 717, 1790
BspANI GGCC 9 cut(s) 111, 285, 354, 780, 976, 1173, 1556, 1621, 1804
BspCNI CTCAG 4 cut(s) 291, 421, 1906, 1982
BspHI TCATGA 2 cut(s) 921, 1363
BspLI GGNNCC 4 cut(s) 112, 530, 592, 621
BspOI GCTAGC 2 cut(s) 899, 1410
BspPI GGATC 1 cut(s) 470
BspQI GCTCTTC 1 cut(s) 339
BspT107I GGYRCC 2 cut(s) 528, 590
BsrDI GCAATG 1 cut(s) 1417
BsrFI RCCGGY 2 cut(s) 725, 1173
BsrI ACTGG 5 cut(s) 185, 343, 683, 1313, 1552
BssAI RCCGGY 2 cut(s) 725, 1173
BssECI CCNNGG 5 cut(s) 286, 533, 1168, 1477, 1530
BssMI GATC 5 cut(s) 260, 462, 1098, 1663, 1711
BssNI GRCGYC 1 cut(s) 322
BssSI CACGAG 1 cut(s) 1561
BssT1I CCWWGG 4 cut(s) 286, 533, 1168, 1477
Bst2BI CACGAG 1 cut(s) 1561
Bst2UI CCWGG 1 cut(s) 1427
Bst4CI ACNGT 1 cut(s) 1838
Bst6I CTCTTC 4 cut(s) 339, 1103, 1362, 1882
BstACI GRCGYC 1 cut(s) 322
BstC8I GCNNGC 8 cut(s) 897, 1175, 1217, 1408, 1510, 1539, 1767, 1811
BstDEI CTNAG 5 cut(s) 278, 429, 1089, 1914, 1969
BstDSI CCRYGG 2 cut(s) 286, 1477
BstENI CCTNNNNNAGG 1 cut(s) 825
BstF5I GGATG 4 cut(s) 209, 719, 777, 1924
BstH2I RGCGCY 1 cut(s) 429
BstHHI GCGC 2 cut(s) 428, 1900
BstKTI GATC 5 cut(s) 263, 465, 1101, 1666, 1714
BstMAI GTCTC 2 cut(s) 825, 1622
BstMBI GATC 5 cut(s) 260, 462, 1098, 1663, 1711
BstMWI GCNNNNNNNGC 2 cut(s) 1586, 1810
BstNI CCWGG 1 cut(s) 1427
BstNSI RCATGY 3 cut(s) 1255, 1541, 1813
BstSCI CCNGG 5 cut(s) 325, 593, 1425, 1530, 1851
BstSFI CTRYAG 2 cut(s) 1066, 1794
BstSLI GKGCMC 1 cut(s) 1477
BstV1I GCAGC 2 cut(s) 56, 59
BstV2I GAAGAC 2 cut(s) 241, 1447
BsuI GTATCC 1 cut(s) 500
BsuRI GGCC 9 cut(s) 111, 285, 354, 780, 976, 1173, 1556, 1621, 1804
BtgI CCRYGG 2 cut(s) 286, 1477
BtrI CACGTC 1 cut(s) 1573
BtsCI GGATG 4 cut(s) 209, 719, 777, 1924
BtsIMutI CAGTG 1 cut(s) 559
Cac8I GCNNGC 8 cut(s) 897, 1175, 1217, 1408, 1510, 1539, 1767, 1811
CaiI CAGNNNCTG 1 cut(s) 50
CciI TCATGA 2 cut(s) 921, 1363
CfoI GCGC 2 cut(s) 428, 1900
Cfr10I RCCGGY 2 cut(s) 725, 1173
Cfr13I GGNCC 5 cut(s) 110, 352, 974, 1554, 1637
Csp6I GTAC 6 cut(s) 346, 529, 591, 937, 1196, 1276
CviQI GTAC 6 cut(s) 346, 529, 591, 937, 1196, 1276
DdeI CTNAG 5 cut(s) 278, 429, 1089, 1914, 1969
DpnI GATC 5 cut(s) 262, 464, 1100, 1665, 1713
DpnII GATC 5 cut(s) 260, 462, 1098, 1663, 1711
DraI TTTAAA 2 cut(s) 666, 988
EaeI YGGCCR 3 cut(s) 283, 778, 1171
Eam1104I CTCTTC 4 cut(s) 339, 1103, 1362, 1882
EarI CTCTTC 4 cut(s) 339, 1103, 1362, 1882
Ecl136II GAGCTC 2 cut(s) 332, 964
Eco130I CCWWGG 4 cut(s) 286, 533, 1168, 1477
Eco24I GRGCYC 2 cut(s) 334, 966
Eco32I GATATC 2 cut(s) 58, 1651
Eco47I GGWCC 1 cut(s) 1637
Eco47III AGCGCT 1 cut(s) 427
Eco53kI GAGCTC 2 cut(s) 332, 964
Eco57I CTGAAG 3 cut(s) 72, 1329, 1781
Eco88I CYCGRG 1 cut(s) 965
EcoICRI GAGCTC 2 cut(s) 332, 964
EcoNI CCTNNNNNAGG 1 cut(s) 825
EcoRI GAATTC 1 cut(s) 648
EcoRII CCWGG 1 cut(s) 1425
EcoRV GATATC 2 cut(s) 58, 1651
EcoT14I CCWWGG 4 cut(s) 286, 533, 1168, 1477
EcoT38I GRGCYC 2 cut(s) 334, 966
ErhI CCWWGG 4 cut(s) 286, 533, 1168, 1477
FaqI GGGAC 2 cut(s) 309, 1495
FblI GTMKAC 1 cut(s) 1958
Fnu4HI GCNGC 3 cut(s) 45, 48, 283
FokI GGATG 4 cut(s) 196, 706, 784, 1931
FriOI GRGCYC 2 cut(s) 334, 966
Fsp4HI GCNGC 3 cut(s) 45, 48, 283
FspBI CTAG 8 cut(s) 317, 822, 896, 1407, 1421, 1445, 1700, 1800
FspI TGCGCA 1 cut(s) 1899
GlaI GCGC 2 cut(s) 427, 1899
GluI GCNGC 3 cut(s) 45, 48, 283
GsuI CTGGAG 2 cut(s) 781, 1330
HaeII RGCGCY 1 cut(s) 429
HaeIII GGCC 9 cut(s) 111, 285, 354, 780, 976, 1173, 1556, 1621, 1804
HapII CCGG 8 cut(s) 213, 327, 595, 726, 1174, 1186, 1532, 1853
HhaI GCGC 2 cut(s) 428, 1900
Hin1I GRCGYC 1 cut(s) 322
Hin6I GCGC 2 cut(s) 426, 1898
HinP1I GCGC 2 cut(s) 426, 1898
HincII GTYRAC 1 cut(s) 1959
HindII GTYRAC 1 cut(s) 1959
HindIII AAGCTT 2 cut(s) 11, 1763
HpaII CCGG 8 cut(s) 213, 327, 595, 726, 1174, 1186, 1532, 1853
HphI GGTGA 5 cut(s) 1070, 1175, 1238, 1779, 1850
Hpy166II GTNNAC 3 cut(s) 1229, 1787, 1959
Hpy188I TCNGA 8 cut(s) 220, 260, 265, 423, 624, 855, 1317, 1915
Hpy188III TCNNGA 6 cut(s) 788, 922, 1128, 1364, 1700, 1952
Hpy8I GTNNAC 3 cut(s) 1229, 1787, 1959
HpyAV CCTTC 9 cut(s) 181, 202, 241, 519, 810, 921, 1396, 1611, 1901
HpyCH4III ACNGT 1 cut(s) 1838
HpyCH4IV ACGT 4 cut(s) 322, 513, 1572, 1947
HpyCH4V TGCA 4 cut(s) 1215, 1463, 1541, 1825
HpyF10VI GCNNNNNNNGC 2 cut(s) 1586, 1810
HpyF3I CTNAG 5 cut(s) 278, 429, 1089, 1914, 1969
HpySE526I ACGT 4 cut(s) 322, 513, 1572, 1947
Hsp92I GRCGYC 1 cut(s) 322
HspAI GCGC 2 cut(s) 426, 1898
KpnI GGTACC 2 cut(s) 532, 594
KroI GCCGGC 1 cut(s) 1173
KroNI GCCGGC 1 cut(s) 1175
Kzo9I GATC 5 cut(s) 260, 462, 1098, 1663, 1711
LguI GCTCTTC 1 cut(s) 339
LmnI GCTCC 6 cut(s) 329, 406, 625, 762, 961, 1534
Lsp1109I GCAGC 2 cut(s) 56, 59
LweI GCATC 2 cut(s) 728, 1812
MaeI CTAG 8 cut(s) 317, 822, 896, 1407, 1421, 1445, 1700, 1800
MaeII ACGT 4 cut(s) 322, 513, 1572, 1947
MaeIII GTNAC 5 cut(s) 187, 610, 1181, 1724, 1860
MalI GATC 5 cut(s) 262, 464, 1100, 1665, 1713
MboI GATC 5 cut(s) 260, 462, 1098, 1663, 1711
MhlI GDGCHC 6 cut(s) 334, 966, 1038, 1477, 1568, 1781
MlsI TGGCCA 1 cut(s) 780
MluNI TGGCCA 1 cut(s) 780
MlyI GAGTC 9 cut(s) 92, 132, 172, 197, 285, 476, 1321, 1335, 1964
MmeI TCCRAC 4 cut(s) 335, 393, 1295, 1661
Mox20I TGGCCA 1 cut(s) 780
MroNI GCCGGC 1 cut(s) 1173
MroXI GAANNNNTTC 1 cut(s) 795
MscI TGGCCA 1 cut(s) 780
MseI TTAA 7 cut(s) 516, 606, 627, 665, 690, 735, 987
MslI CAYNNNNRTG 3 cut(s) 1395, 1571, 1936
Msp20I TGGCCA 1 cut(s) 780
MspA1I CMGCKG 2 cut(s) 50, 282
MspI CCGG 8 cut(s) 213, 327, 595, 726, 1174, 1186, 1532, 1853
MspR9I CCNGG 5 cut(s) 327, 595, 1427, 1532, 1853
MvaI CCWGG 1 cut(s) 1427
MwoI GCNNNNNNNGC 2 cut(s) 1586, 1810
NaeI GCCGGC 1 cut(s) 1175
NciI CCSGG 4 cut(s) 327, 595, 1532, 1853
NcoI CCATGG 2 cut(s) 286, 1477
NdeII GATC 5 cut(s) 260, 462, 1098, 1663, 1711
NgoMIV GCCGGC 1 cut(s) 1173
NheI GCTAGC 2 cut(s) 895, 1406
NlaIV GGNNCC 4 cut(s) 112, 530, 592, 621
NmuCI GTSAC 2 cut(s) 1181, 1860
NsbI TGCGCA 1 cut(s) 1899
NspI RCATGY 3 cut(s) 1255, 1541, 1813
OliI CACNNNNGTG 1 cut(s) 1571
PaeI GCATGC 2 cut(s) 1541, 1813
PaeR7I CTCGAG 1 cut(s) 965
PagI TCATGA 2 cut(s) 921, 1363
PciSI GCTCTTC 1 cut(s) 339
PdiI GCCGGC 1 cut(s) 1175
PdmI GAANNNNTTC 1 cut(s) 795
PfeI GAWTC 1 cut(s) 418
PflMI CCANNNNNTGG 1 cut(s) 349
PfoI TCCNGGA 2 cut(s) 325, 1851
PkrI GCNGC 3 cut(s) 46, 49, 284
PleI GAGTC 9 cut(s) 91, 131, 171, 197, 285, 476, 1320, 1334, 1963
PpsI GAGTC 9 cut(s) 91, 131, 171, 197, 285, 476, 1320, 1334, 1963
PshBI ATTAAT 2 cut(s) 606, 627
Psp124BI GAGCTC 2 cut(s) 334, 966
Psp6I CCWGG 1 cut(s) 1425
PspGI CCWGG 1 cut(s) 1425
PspN4I GGNNCC 4 cut(s) 112, 530, 592, 621
PspPI GGNCC 5 cut(s) 110, 352, 974, 1554, 1637
PspXI VCTCGAGB 1 cut(s) 965
PstNI CAGNNNCTG 1 cut(s) 50
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 6 cut(s) 347, 530, 592, 938, 1197, 1277
RsaNI GTAC 6 cut(s) 346, 529, 591, 937, 1196, 1276
RseI CAYNNNNRTG 3 cut(s) 1395, 1571, 1936
SacI GAGCTC 2 cut(s) 334, 966
SalI GTCGAC 1 cut(s) 1957
SapI GCTCTTC 1 cut(s) 339
SaqAI TTAA 7 cut(s) 516, 606, 627, 665, 690, 735, 987
SatI GCNGC 3 cut(s) 45, 48, 283
Sau3AI GATC 5 cut(s) 260, 462, 1098, 1663, 1711
Sau96I GGNCC 5 cut(s) 110, 352, 974, 1554, 1637
ScaI AGTACT 1 cut(s) 347
SchI GAGTC 9 cut(s) 92, 132, 172, 197, 285, 476, 1321, 1335, 1964
ScrFI CCNGG 5 cut(s) 327, 595, 1427, 1532, 1853
SduI GDGCHC 6 cut(s) 334, 966, 1038, 1477, 1568, 1781
SfaNI GCATC 2 cut(s) 728, 1812
SfcI CTRYAG 2 cut(s) 1066, 1794
Sfr274I CTCGAG 1 cut(s) 965
SinI GGWCC 1 cut(s) 1637
SlaI CTCGAG 1 cut(s) 965
SmiMI CAYNNNNRTG 3 cut(s) 1395, 1571, 1936
SmlI CTYRAG 2 cut(s) 786, 965
SmoI CTYRAG 2 cut(s) 786, 965
SphI GCATGC 2 cut(s) 1541, 1813
SsiI CCGC 3 cut(s) 282, 717, 1790
SspI AATATT 1 cut(s) 1696
SspMI CTAG 8 cut(s) 317, 822, 896, 1407, 1421, 1445, 1700, 1800
SstI GAGCTC 2 cut(s) 334, 966
StyD4I CCNGG 5 cut(s) 325, 593, 1425, 1530, 1851
StyI CCWWGG 4 cut(s) 286, 533, 1168, 1477
TaaI ACNGT 1 cut(s) 1838
TaiI ACGT 4 cut(s) 325, 516, 1575, 1950
TaqI TCGA 6 cut(s) 81, 465, 579, 966, 1599, 1958
TatI WGTACW 2 cut(s) 345, 1195
TauI GCSGC 1 cut(s) 285
TfiI GAWTC 1 cut(s) 418
Tru1I TTAA 7 cut(s) 516, 606, 627, 665, 690, 735, 987
Tru9I TTAA 7 cut(s) 516, 606, 627, 665, 690, 735, 987
TscAI CASTG 1 cut(s) 559
TseFI GTSAC 2 cut(s) 1181, 1860
TseI GCWGC 2 cut(s) 44, 47
Tsp45I GTSAC 2 cut(s) 1181, 1860
TspDTI ATGAA 7 cut(s) 55, 462, 581, 788, 1352, 1380, 1932
TspGWI ACGGA 1 cut(s) 537
TspRI CASTG 1 cut(s) 559
Van91I CCANNNNNTGG 1 cut(s) 349
VpaK11BI GGWCC 1 cut(s) 1637
VspI ATTAAT 2 cut(s) 606, 627
XagI CCTNNNNNAGG 1 cut(s) 825
XapI RAATTY 3 cut(s) 648, 1145, 1189
XbaI TCTAGA 1 cut(s) 1699
XceI RCATGY 3 cut(s) 1255, 1541, 1813
XcmI CCANNNNNNNNNTGG 2 cut(s) 570, 1433
XhoI CTCGAG 1 cut(s) 965
XmiI GTMKAC 1 cut(s) 1958
XmnI GAANNNNTTC 1 cut(s) 795
XspI CTAG 8 cut(s) 317, 822, 896, 1407, 1421, 1445, 1700, 1800
ZraI GACGTC 1 cut(s) 323
ZrmI AGTACT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.