Rroxscaffold_6G00419650

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
Physical Location & Seq
Forward (+)
41033674 .. 41038007
4334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00419650.1

Sequence Viewer

Length: 2016 bp
ATGTTTGTCAAGCTTTCAGCTTTCCTAGCACTACTAGTACTTCTGGCACCCGCAGAGGCCCAAGACCTCAATTTCATCTACAATGATGGTTTCTCTGGCCGTTCTGGTCTTAATCTCAGTCTAGACGGCATAGCAGAGATCACACCAAAAGGTCTCTTGAAGCTTACAAAGCCTACCAAACAGAGAAGTGGTCATGCCTTCTACCCTAACCCAGTAACCTTCAAGAACTCAGAGAACGACTCCGCTTTCTCCTTCTCCACCAACTTTATCTTTGCCATCCAACCAGAGTACACTACTTCCGGCGGCGATGGAATGGCCTTTGTCATCGCTCCGACGAGAGGCCTCCCCGAAGCTCTACCGATCCAGTACTTGGGCCTGTTCAACGTCTCCAACAATGGGAATTTCAACAATCATGTTTTTGCTGTGGAGCTTGACACGATCCAGAACCCGGAATTCAGTGACATCAATGAAAACCATGTTGGGATCGACATCAATGGCTTGCACTCTGTCAAAGCTGCTCCAGCTGGTTATTTTGGTGGTCAGTTCAAGAACCTGACTCTTATCAGTGGTAAAGAAATGAGAGTTTGGGTTGAATATGATGGTACCAAGAAGCAAATTGAAGTTACTATGGCTCCAATTGCTGTTGCAACTAAATCCCCAACTCCACTTTTGTCTTTGAAATATGACCTTTCCCCAATTCTCAACAAAACCATGTATGTTGGCTTTTCCTCTTCAACTGGTCCGTTCCGCACATCCCATTATGTAGTGGGTTGGAGCTTTAGGATGAATGGCCAAGCTCAAGACCTTATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTAAAAAGAGGTCCATGCTTTTCACCTTTGGTGTGCCTCTGATTTCAGTGGTTTTGCTAGTGGTTTCTGGGGTGCTTTATGTCATAAGAAGGAAGAGGAAGTTTGCAGAAGTCCTTGAAGATTGGGAGCTAGAGTATGGTCCTCAGAGGTTTGAGTACAAAGAATTGTATATAGCTACCAAAGGGTTTAGGGAAAAGGAGCTTTTGGGAACTGGGGGATTTGGTAAAGTTTATAGAGGTTTATTACCCTCCTCTAAAATTGAGATTGCAGTGAAGAGGGTATCACATGAATCAAGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGGAATTTAGTACAACTGTTGGGATATTGCAGGCGAAAAGGGGAGCTGCTTTTGGTCTATGACTACATGCCTAATGGAAGCTTGGACAAATACCTCTTTGATCAACCTGAGGTGACCCTTAATTGGAGCCAGAGGTTTAAAGTCATCAAAGGTGTGGCTTCAGGGCTGTTCTATCTTCATGAAGAATGGGAACAGGTTGTGATTCATAGAGATGTGAAGGCCAGTAATGTGTTGCTAGATGGGGAATTCAATGGAAGGCTAGGAGATTTCGGGCTTGCAAGATTATACGACCATGGAACAGACCCTCAAACTACTCATATAGTTGGAACACTCGGGTACCTAGCCCCAGAGCACACAAGAACAGGTCGGGCCACCACGAGCACCGACGTGTTTGCTTTTGGGGCATTTTTGCTCGAAGTTGCTTGCGGAAAAAGGCCAATTAAGACACAGGGTCCAGAAGATATGATTTTGGTTGATTGGGTGCTTTCTTGTTGGAATAGAAGTAACATCCTTGAGGCAAGAGATCAGAGCTTTGGTACGGATTTTGTAGCCGAGGAAGTGAAGTTGGTGTTGAAGCTTGGGCTTTTGTGCTCTCATTCGGAGCCAGCGGCAAGGCCAAGCATGCGACAAGTCGTTCAGTACTTGGCTGGTGATGTTGCTTTGCCGGAAGCGTCACTTCTCGGGCTTTCTTCTAGTGGCTTACCGGTTGGACATTGTGAAGGTTTTGATGACCATGCTATGTCGTATCAGTCTTCTTTAGGCAAGGGGTCCTCCCAATCATCATATGTTGCAGAGTCGGCACTACTTTCAGGTGGTCGTTGA

Protein Analysis

671

Amino Acids

74.05

Weight (kDa)

8.06

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 23 - 275 1.6e-82 Legume lectin domain
Lectin_L-type_dom PF18483 42 - 253 2.8e-10 Legume lectin beta-barrel domain
Pkinase PF00069 344 - 611 2.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 347 - 613 2.7e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000256)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07460 AT1G07460
fragaria_vesca FvH4_6g13200
malus_domestica MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 833
Acc65I GGTACC 2 cut(s) 602, 1530
AccB1I GGYRCC 3 cut(s) 46, 602, 1530
AccB7I CCANNNNNTGG 1 cut(s) 370
AciI CCGC 6 cut(s) 51, 243, 303, 748, 1620, 1802
AclWI GGATC 3 cut(s) 355, 433, 491
AcoI YGGCCR 3 cut(s) 97, 790, 1180
AcsI RAATTY 5 cut(s) 400, 452, 1154, 1198, 1439
AcuI CTGAAG 1 cut(s) 1338
AfaI GTAC 9 cut(s) 39, 290, 368, 604, 1001, 1206, 1532, 1732, 1835
AfiI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1317
AflIII ACRYGT 1 cut(s) 1581
AgeI ACCGGT 1 cut(s) 1897
AhdI GACNNNNNGTC 1 cut(s) 1644
AhlI ACTAGT 1 cut(s) 34
AjiI CACGTC 1 cut(s) 1582
AjuI GAANNNNNNNTTGG 2 cut(s) 462, 494
AleI CACNNNNGTG 1 cut(s) 1580
Alw21I GWGCWC 3 cut(s) 1548, 1577, 1787
Alw26I GTCTC 2 cut(s) 158, 391
AlwI GGATC 3 cut(s) 355, 433, 491
Ama87I CYCGRG 2 cut(s) 1526, 1874
ApeKI GCWGC 2 cut(s) 515, 1240
ApoI RAATTY 5 cut(s) 400, 452, 1154, 1198, 1439
AsiGI ACCGGT 1 cut(s) 1897
Asp718I GGTACC 2 cut(s) 602, 1530
AspS9I GGNCC 8 cut(s) 58, 373, 740, 855, 983, 1563, 1646, 1962
AsuC2I CCSGG 1 cut(s) 449
AsuHPI GGTGA 4 cut(s) 859, 1184, 1318, 1856
AvaI CYCGRG 2 cut(s) 1526, 1874
AvaII GGWCC 5 cut(s) 740, 855, 983, 1646, 1962
AxyI CCTNAGG 1 cut(s) 1302
BaeI ACNNNNGTAYC 2 cut(s) 1514, 1547
BalI TGGCCA 1 cut(s) 792
BanI GGYRCC 3 cut(s) 46, 602, 1530
BauI CACGAG 1 cut(s) 1570
BbsI GAAGAC 1 cut(s) 1938
Bbv12I GWGCWC 3 cut(s) 1548, 1577, 1787
BbvI GCAGC 2 cut(s) 502, 1227
BccI CCATC 5 cut(s) 80, 284, 302, 593, 1427
BceAI ACGGC 2 cut(s) 84, 142
BcgI CGANNNNNNTGC 2 cut(s) 1568, 1602
BclI TGATCA 1 cut(s) 1294
BcnI CCSGG 1 cut(s) 449
BcoDI GTCTC 2 cut(s) 158, 391
BcuI ACTAGT 1 cut(s) 34
BfuAI ACCTGC 1 cut(s) 833
BisI GCNGC 4 cut(s) 304, 516, 1241, 1803
BlsI GCNGC 4 cut(s) 305, 517, 1242, 1804
BmcAI AGTACT 3 cut(s) 39, 368, 1835
Bme1390I CCNGG 1 cut(s) 449
Bme18I GGWCC 5 cut(s) 740, 855, 983, 1646, 1962
BmeRI GACNNNNNGTC 1 cut(s) 1644
BmeT110I CYCGRG 2 cut(s) 1526, 1874
BmgBI CACGTC 1 cut(s) 1582
BmgT120I GGNCC 8 cut(s) 58, 373, 740, 855, 983, 1563, 1646, 1962
BmiI GGNNCC 8 cut(s) 48, 604, 633, 1322, 1532, 1647, 1797, 1963
BmrFI CCNGG 1 cut(s) 449
BmrI ACTGGG 2 cut(s) 206, 1065
BmuI ACTGGG 2 cut(s) 206, 1065
BpiI GAAGAC 1 cut(s) 1938
BplI GAGNNNNNCTC 2 cut(s) 224, 256
BpmI CTGGAG 1 cut(s) 504
BpuEI CTTGAG 2 cut(s) 783, 1727
BpuMI CCSGG 1 cut(s) 449
BsaBI GATNNNNATC 1 cut(s) 488
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 2 cut(s) 1486, 1746
BsaWI WCCGGW 2 cut(s) 1194, 1897
BsaXI ACNNNNNCTCC 4 cut(s) 616, 646, 962, 992
Bsc4I CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1317
Bse118I RCCGGY 2 cut(s) 1182, 1897
Bse1I ACTGG 5 cut(s) 212, 364, 742, 1060, 1416
Bse21I CCTNAGG 1 cut(s) 1302
Bse3DI GCAATG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 488
BseDI CCNNGG 2 cut(s) 1486, 1746
BseGI GGATG 5 cut(s) 276, 752, 789, 1152, 1701
BseJI GATNNNNATC 1 cut(s) 488
BseLI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1317
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 4 cut(s) 130, 243, 1001, 1293
BseNI ACTGG 5 cut(s) 212, 364, 742, 1060, 1416
BseRI GAGGAG 1 cut(s) 1084
BseXI GCAGC 2 cut(s) 502, 1227
BshNI GGYRCC 3 cut(s) 46, 602, 1530
BshTI ACCGGT 1 cut(s) 1897
BsiHKAI GWGCWC 3 cut(s) 1548, 1577, 1787
BsiHKCI CYCGRG 2 cut(s) 1526, 1874
BsiSI CCGG 6 cut(s) 300, 449, 1183, 1195, 1859, 1898
BslI CCNNNNNNNGG 5 cut(s) 338, 370, 396, 448, 1317
BsmAI GTCTC 2 cut(s) 158, 391
BsmBI CGTCTC 1 cut(s) 391
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 2 cut(s) 1526, 1874
Bsp1286I GDGCHC 3 cut(s) 1548, 1577, 1787
Bsp143I GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
Bsp19I CCATGG 1 cut(s) 1486
BspACI CCGC 6 cut(s) 51, 243, 303, 748, 1620, 1802
BspCNI CTCAG 4 cut(s) 129, 242, 1000, 1294
BspHI TCATGA 1 cut(s) 1372
BspLI GGNNCC 8 cut(s) 48, 604, 633, 1322, 1532, 1647, 1797, 1963
BspMI ACCTGC 1 cut(s) 833
BspPI GGATC 3 cut(s) 355, 433, 491
BspT107I GGYRCC 3 cut(s) 46, 602, 1530
BspTNI GGTCTC 1 cut(s) 158
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 2 cut(s) 1182, 1897
BsrI ACTGG 5 cut(s) 212, 364, 742, 1060, 1416
BssAI RCCGGY 2 cut(s) 1182, 1897
BssECI CCNNGG 2 cut(s) 1486, 1746
BssMI GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
BssSI CACGAG 1 cut(s) 1570
BssT1I CCWWGG 1 cut(s) 1486
Bst2BI CACGAG 1 cut(s) 1570
Bst4CI ACNGT 1 cut(s) 1212
Bst6I CTCTTC 3 cut(s) 736, 932, 1112
BstC8I GCNNGC 7 cut(s) 500, 1184, 1226, 1470, 1618, 1800, 1817
BstDEI CTNAG 4 cut(s) 116, 229, 987, 1302
BstDSI CCRYGG 1 cut(s) 1486
BstEII GGTNACC 1 cut(s) 1306
BstF5I GGATG 5 cut(s) 276, 752, 789, 1152, 1701
BstKTI GATC 6 cut(s) 141, 363, 441, 486, 1297, 1720
BstMAI GTCTC 2 cut(s) 158, 391
BstMBI GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
BstMWI GCNNNNNNNGC 7 cut(s) 26, 169, 521, 638, 1595, 1816, 1991
BstNSI RCATGY 2 cut(s) 1264, 1819
BstPI GGTNACC 1 cut(s) 1306
BstSCI CCNGG 1 cut(s) 447
BstV1I GCAGC 2 cut(s) 502, 1227
BstV2I GAAGAC 1 cut(s) 1938
Bsu36I CCTNAGG 1 cut(s) 1302
BtgI CCRYGG 1 cut(s) 1486
BtgZI GCGATG 2 cut(s) 310, 321
BtrI CACGTC 1 cut(s) 1582
BtsCI GGATG 5 cut(s) 276, 752, 789, 1152, 1701
BtsI GCAGTG 1 cut(s) 1119
BtsIMutI CAGTG 4 cut(s) 463, 571, 897, 1119
BveI ACCTGC 1 cut(s) 833
Cac8I GCNNGC 7 cut(s) 500, 1184, 1226, 1470, 1618, 1800, 1817
CciI TCATGA 1 cut(s) 1372
Cfr10I RCCGGY 2 cut(s) 1182, 1897
Cfr13I GGNCC 8 cut(s) 58, 373, 740, 855, 983, 1563, 1646, 1962
CseI GACGC 1 cut(s) 1854
Csp6I GTAC 9 cut(s) 38, 289, 367, 603, 1000, 1205, 1531, 1731, 1834
CspAI ACCGGT 1 cut(s) 1897
CviQI GTAC 9 cut(s) 38, 289, 367, 603, 1000, 1205, 1531, 1731, 1834
DdeI CTNAG 4 cut(s) 116, 229, 987, 1302
DpnI GATC 6 cut(s) 140, 362, 440, 485, 1296, 1719
DpnII GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
DraI TTTAAA 1 cut(s) 1333
DriI GACNNNNNGTC 1 cut(s) 1644
EaeI YGGCCR 3 cut(s) 97, 790, 1180
Eam1104I CTCTTC 3 cut(s) 736, 932, 1112
Eam1105I GACNNNNNGTC 1 cut(s) 1644
EarI CTCTTC 3 cut(s) 736, 932, 1112
Eco130I CCWWGG 1 cut(s) 1486
Eco147I AGGCCT 1 cut(s) 342
Eco31I GGTCTC 1 cut(s) 158
Eco47I GGWCC 5 cut(s) 740, 855, 983, 1646, 1962
Eco57I CTGAAG 1 cut(s) 1338
Eco81I CCTNAGG 1 cut(s) 1302
Eco88I CYCGRG 2 cut(s) 1526, 1874
Eco91I GGTNACC 1 cut(s) 1306
EcoO109I RGGNCCY 1 cut(s) 1962
EcoO65I GGTNACC 1 cut(s) 1306
EcoRI GAATTC 2 cut(s) 452, 1439
EcoT14I CCWWGG 1 cut(s) 1486
ErhI CCWWGG 1 cut(s) 1486
Esp3I CGTCTC 1 cut(s) 391
FalI AAGNNNNNCTT 2 cut(s) 1854, 1886
FauI CCCGC 1 cut(s) 58
FauNDI CATATG 1 cut(s) 1978
FbaI TGATCA 1 cut(s) 1294
Fnu4HI GCNGC 4 cut(s) 304, 516, 1241, 1803
FokI GGATG 5 cut(s) 263, 739, 796, 1159, 1688
Fsp4HI GCNGC 4 cut(s) 304, 516, 1241, 1803
GluI GCNGC 4 cut(s) 304, 516, 1241, 1803
GsuI CTGGAG 1 cut(s) 504
HapII CCGG 6 cut(s) 300, 449, 1183, 1195, 1859, 1898
HgaI GACGC 1 cut(s) 1854
HindIII AAGCTT 4 cut(s) 11, 161, 1273, 1769
HinfI GANTC 5 cut(s) 239, 556, 1133, 1396, 1988
HpaII CCGG 6 cut(s) 300, 449, 1183, 1195, 1859, 1898
HphI GGTGA 4 cut(s) 859, 1184, 1318, 1856
Hpy166II GTNNAC 1 cut(s) 291
Hpy188I TCNGA 6 cut(s) 232, 333, 885, 990, 1722, 1795
Hpy188III TCNNGA 9 cut(s) 122, 157, 223, 442, 547, 800, 1137, 1373, 1649
Hpy8I GTNNAC 1 cut(s) 291
Hpy99I CGWCG 2 cut(s) 337, 1583
HpyAV CCTTC 8 cut(s) 208, 229, 262, 927, 1144, 1405, 1443, 1907
HpyCH4III ACNGT 1 cut(s) 1212
HpyCH4IV ACGT 2 cut(s) 384, 1581
HpyCH4V TGCA 8 cut(s) 502, 647, 842, 950, 1112, 1224, 1472, 1985
HpyF10VI GCNNNNNNNGC 7 cut(s) 26, 169, 521, 638, 1595, 1816, 1991
HpyF3I CTNAG 4 cut(s) 116, 229, 987, 1302
HpySE526I ACGT 2 cut(s) 384, 1581
KpnI GGTACC 2 cut(s) 606, 1534
KroI GCCGGC 1 cut(s) 1182
KroNI GCCGGC 1 cut(s) 1184
Ksp22I TGATCA 1 cut(s) 1294
Kzo9I GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
Lsp1109I GCAGC 2 cut(s) 502, 1227
MaeII ACGT 2 cut(s) 384, 1581
MaeIII GTNAC 7 cut(s) 214, 458, 622, 1190, 1306, 1697, 1866
MalI GATC 6 cut(s) 140, 362, 440, 485, 1296, 1719
MboI GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
MboII GAAGA 9 cut(s) 723, 949, 974, 1129, 1361, 1388, 1664, 1875, 1938
MfeI CAATTG 1 cut(s) 636
MhlI GDGCHC 3 cut(s) 1548, 1577, 1787
MlsI TGGCCA 1 cut(s) 792
MluNI TGGCCA 1 cut(s) 792
MlyI GAGTC 3 cut(s) 233, 550, 1997
MmeI TCCRAC 7 cut(s) 304, 356, 414, 752, 1498, 1667, 1882
Mox20I TGGCCA 1 cut(s) 792
MroNI GCCGGC 1 cut(s) 1182
MscI TGGCCA 1 cut(s) 792
MseI TTAA 4 cut(s) 111, 1314, 1332, 1635
MslI CAYNNNNRTG 2 cut(s) 1404, 1580
Msp20I TGGCCA 1 cut(s) 792
MspA1I CMGCKG 2 cut(s) 524, 1802
MspI CCGG 6 cut(s) 300, 449, 1183, 1195, 1859, 1898
MspR9I CCNGG 1 cut(s) 449
MunI CAATTG 1 cut(s) 636
MwoI GCNNNNNNNGC 7 cut(s) 26, 169, 521, 638, 1595, 1816, 1991
NaeI GCCGGC 1 cut(s) 1184
NciI CCSGG 1 cut(s) 449
NcoI CCATGG 1 cut(s) 1486
NdeI CATATG 1 cut(s) 1978
NdeII GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
NgoMIV GCCGGC 1 cut(s) 1182
NlaIV GGNNCC 8 cut(s) 48, 604, 633, 1322, 1532, 1647, 1797, 1963
NmeAIII GCCGAG 1 cut(s) 1771
NmuCI GTSAC 4 cut(s) 458, 1190, 1306, 1866
NspI RCATGY 2 cut(s) 1264, 1819
OliI CACNNNNGTG 1 cut(s) 1580
PaeI GCATGC 1 cut(s) 1819
PagI TCATGA 1 cut(s) 1372
PceI AGGCCT 1 cut(s) 342
PdiI GCCGGC 1 cut(s) 1184
PfeI GAWTC 2 cut(s) 1133, 1396
PflMI CCANNNNNTGG 1 cut(s) 370
PinAI ACCGGT 1 cut(s) 1897
PkrI GCNGC 4 cut(s) 305, 517, 1242, 1804
PleI GAGTC 3 cut(s) 233, 550, 1996
PpsI GAGTC 3 cut(s) 233, 550, 1996
PpuMI RGGWCCY 1 cut(s) 1962
Psp5II RGGWCCY 1 cut(s) 1962
PspEI GGTNACC 1 cut(s) 1306
PspN4I GGNNCC 8 cut(s) 48, 604, 633, 1322, 1532, 1647, 1797, 1963
PspPI GGNCC 8 cut(s) 58, 373, 740, 855, 983, 1563, 1646, 1962
PspPPI RGGWCCY 1 cut(s) 1962
PvuII CAGCTG 1 cut(s) 524
RsaI GTAC 9 cut(s) 39, 290, 368, 604, 1001, 1206, 1532, 1732, 1835
RsaNI GTAC 9 cut(s) 38, 289, 367, 603, 1000, 1205, 1531, 1731, 1834
RseI CAYNNNNRTG 2 cut(s) 1404, 1580
SaqAI TTAA 4 cut(s) 111, 1314, 1332, 1635
SatI GCNGC 4 cut(s) 304, 516, 1241, 1803
Sau3AI GATC 6 cut(s) 138, 360, 438, 483, 1294, 1717
Sau96I GGNCC 8 cut(s) 58, 373, 740, 855, 983, 1563, 1646, 1962
ScaI AGTACT 3 cut(s) 39, 368, 1835
SchI GAGTC 3 cut(s) 233, 550, 1997
ScrFI CCNGG 1 cut(s) 449
SduI GDGCHC 3 cut(s) 1548, 1577, 1787
SinI GGWCC 5 cut(s) 740, 855, 983, 1646, 1962
SmiMI CAYNNNNRTG 2 cut(s) 1404, 1580
SmlI CTYRAG 2 cut(s) 798, 1706
SmoI CTYRAG 2 cut(s) 798, 1706
SpeI ACTAGT 1 cut(s) 34
SphI GCATGC 1 cut(s) 1819
SseBI AGGCCT 1 cut(s) 342
SsiI CCGC 6 cut(s) 51, 243, 303, 748, 1620, 1802
StuI AGGCCT 1 cut(s) 342
StyD4I CCNGG 1 cut(s) 447
StyI CCWWGG 1 cut(s) 1486
TaaI ACNGT 1 cut(s) 1212
TaiI ACGT 2 cut(s) 387, 1584
TaqI TCGA 2 cut(s) 486, 1608
TatI WGTACW 6 cut(s) 37, 288, 366, 999, 1204, 1833
TauI GCSGC 2 cut(s) 306, 1805
TfiI GAWTC 2 cut(s) 1133, 1396
Tru1I TTAA 4 cut(s) 111, 1314, 1332, 1635
Tru9I TTAA 4 cut(s) 111, 1314, 1332, 1635
TscAI CASTG 4 cut(s) 463, 571, 897, 1119
TseFI GTSAC 4 cut(s) 458, 1190, 1306, 1866
TseI GCWGC 2 cut(s) 515, 1240
Tsp45I GTSAC 4 cut(s) 458, 1190, 1306, 1866
TspDTI ATGAA 8 cut(s) 64, 483, 800, 1146, 1163, 1361, 1388, 1389
TspGWI ACGGA 2 cut(s) 732, 1748
TspRI CASTG 4 cut(s) 463, 571, 897, 1119
Van91I CCANNNNNTGG 1 cut(s) 370
VpaK11BI GGWCC 5 cut(s) 740, 855, 983, 1646, 1962
XapI RAATTY 5 cut(s) 400, 452, 1154, 1198, 1439
XbaI TCTAGA 1 cut(s) 121
XceI RCATGY 2 cut(s) 1264, 1819
ZrmI AGTACT 3 cut(s) 39, 368, 1835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.