Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0000256

Physical Location & Seq

Genomic Coordinates Forward (+)

12286407 .. 12288825

Gene Structure 2419 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG145000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

ATGTTTGTCAAGCTTTCTGCTCTCCTAGTACTACTAGTACTTCTGGCACCCGCAGAAGCCCAAGACCTCAATTTCATCTACAATGATGGTTTCTCTGGCCGTTCTGGTCTTAATCTCAGTCTAGACGGCGTAGCAGAGATCACACCAAAAGGTCACTTGAAGCTTACAAACGGCACCAGACAGAGTAGTGGTCATGCTTTCTACCCTAACCCAGTAACCTTCAAGAATTCAGAGAAAGACTCCGCTTTCTCCTTCTCCACCAACTTTGTCTTTGCCATCCGATCTCAGTACAGTACTTTCACCGGCCATGGAATGGCCTTTGTCATCGCTCCGATGAGAGGCCTCCCCGGAGGTCTGTCAAACCAGTACCTGAGCCTGTTCAACGTCTCCAACAATGGGAAGTTCACCAATCATGTTTTTGCTGTGGAGCTTGACACGATCGAGAACCCGGAATTCAGTGACATCAATGGTAACCATGTTGGGATAGACATCAATGGCTTGCGCTCTGTCAAAGCTGCTTCAGCTGGTTATTTTGATGGTCAGTACTTCAAGAACCTGACTCTTAACAGTGGTAAAGAAATGAGAGTCTGGGTTGAATATGATGGTACCAAGAAGCAAATTGAAGTGACTATGGCTCCAATTGCTGTTGCAACTAAACCCCCAACTCCACTTTTGTCTTTGAAATATGACCTTTCCCCAATTCTCAAAAAAACCATGTATGTTGGCTTTTCCTCTTCAACTGGTTCGTTCCTCACATCCCATATTGTAGTGGGTTGGAGCTTTAGGATGAATGGCCAAGCTCAAGACCTTATAGCTTCCAAACTTCCCAAGTTGCCTAGCATTGCAGGTAAAAAGAGGTCCATGCTTTTCACCTTTGGTGTGCCTCTGATTTCAGTGAGTTTGGTTTTGCTAGTGGTTTCTGGGGTGCTTTATGTCATAAGAAGGAAGAGGAAGTTTGCAGAAGTGCTTGAAGATTGGGAGCTAGATTATGGTCCTCAGAGGTTTAAGTACAAAGAATTGTATATAGCCACCAAAGGGTTTAGGGAAAAGGAGCTTTTGGGAACTGGAGGATTTGGTAAAGTTTATAGAGGTTTATTACCCTCCTCTAAAATAGAGATTGCAGTGAAGAGGGTATCACATGAATCAAGACAGGGGATGAAGGAATTTGTAGCAGAAATTGTTAGTATTGGCCGGCTTCGTCACCGGAATTTAGTACAACTGTTGGGATATTGCAGGAGTAACATCCTTGAGGCAAGAGATCAGAGTTTTGGTACGGATTTTGTAGCCGAGGAAGTGGAGTTGGTGTTGAAGCTTGGGCTTTTGTGCTCTCATTCGGAGCCAGCGGCAAGGCCAAGCATGCGACAAGTCGTTCAGTACTTGGCCGGTGATGTTGCTTTGTCGGAAATGTCACTTCTCGGGCTTTCTTCTAGTGACATAGCGATTGGACACCGTGTAGGTTTTGATGACTATGCTATGTCGTATCAGTCTTCTTTAGGCAATAAGTCCTCCCATTCATCATATGTTCCAGAGTCGGCACTACTTTCAGGTGGTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0010033 GO:0014070 GO:0016020 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0044464 GO:0046677 GO:0048229 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

518

Amino Acids

56.92

Weight (kDa)

9.32

Isoelectric Point (pI)

39.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	23 - 276	9e-82	Legume lectin domain
Lectin_L-type_dom	PF18483	40 - 251	9.1e-09	Legume lectin beta-barrel domain
Pkinase	PF00069	347 - 413	2e-08	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	350 - 412	2.1e-09	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07460 AT1G07460
fragaria_vesca	FvH4_6g13200
malus_domestica	MD12G1146600.v1.1 MD12G1147100.v1.1 MD12G1147300.v1.1 MD12G1147500.v1.1
prunus_persica	Prupe.6G259500_v2.0.a1 Prupe.6G259800_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G259900_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G260000_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261400_v2.0.a1 Prupe.6G261500_v2.0.a1
pyrus_communis	pycom04g12150 pycom12g14040 pycom12g14060 pycom12g14080 pycom12g14110
rosa_chinensis	RchiOBHm_Chr3g0460311 RchiOBHm_Chr3g0465181 RchiOBHm_Chr3g0465701 RchiOBHm_Chr3g0465801 RchiOBHm_Chr3g0465861 RchiOBHm_Chr3g0465911 RchiOBHm_Chr3g0465931 RchiOBHm_Chr3g0465991 RchiOBHm_Chr3g0466011 RchiOBHm_Chr4g0404151 RchiOBHm_Chr6g0253601 RchiOBHm_Chr6g0259671 RchiOBHm_Chr7g0189621 RchiOBHm_Chr7g0189631 RchiOBHm_Chr7g0216481
rosa_laevigata	RLG00000014514 RLG00000014515 RLG00000014999 RLG00000024609 RLG00000024614 RLG00000024616 RLG00000024620 RLG00000024624 RLG00000024627 RLG00000024650 RLG00000025025
rosa_multiflora	Rmu_co8340115.1_g000001 Rmu_sc0000362.1_g000006 Rmu_sc0000449.1_g000013 Rmu_sc0000536.1_g000003 Rmu_sc0000536.1_g000006 Rmu_sc0002405.1_g000009 Rmu_sc0003391.1_g000002 Rmu_sc0003391.1_g000003 Rmu_sc0003391.1_g000013 Rmu_sc0003492.1_g000011 Rmu_sc0004305.1_g000015 Rmu_sc0004305.1_g000025 Rmu_sc0007705.1_g000012 Rmu_sc0007705.1_g000014 Rmu_sc0007705.1_g000015 Rmu_sc0007705.1_g000018 Rmu_sc0009386.1_g000006 Rmu_sc0009386.1_g000008 Rmu_sc0010030.1_g000001 Rmu_sc0010217.1_g000002 Rmu_sc0034485.1_g000001 Rmu_ssc0000454.1_g000025
rosa_roxburghii	Rroxscaffold_3G00243190 Rroxscaffold_6G00413130 Rroxscaffold_6G00414850 Rroxscaffold_6G00414890 Rroxscaffold_6G00414910 Rroxscaffold_6G00414930 Rroxscaffold_6G00419650 Rroxscaffold_7G00206940
rosa_rugosa	Rorug03G0041500 Rorug03G0078300 Rorug03G0078500 Rorug03G0078600 Rorug03G0078800 Rorug03G0078900 Rorug07G0160500
rosa_samantha	Rh3BG103300 Rh3BG139800 Rh3BG143800 Rh3BG144300 Rh3BG145000 Rh3BG145500 Rh3BG145600 Rh3BG146000 Rh3CG104900 Rh3CG141500 Rh3CG145100 Rh3CG145800 Rh3CG146300 Rh3CG146500 Rh3CG146700 Rh3CG147000 Rh3CG149900 Rh3DG104600 Rh3DG141000 Rh3DG145100 Rh3DG145600 Rh3DG146100 Rh3DG146400 Rh3DG146600 Rh3DG146900 Rh4AG123200 Rh4BG116400 Rh6AG060500 Rh6BG101000 Rh7AG299800 Rh7BG291300 Rh7DG106700 Rh7DG106900
rosa_wichuraiana	Rw3G008440 Rw3G011450 Rw3G011670 Rw3G011710 Rw3G011720 Rw3G011750 Rw3G011770 Rw3G011810 Rw6G005390 Rw7G009000 Rw7G025480

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	836
Acc65I	GGTACC	1 cut(s)	605
AccB1I	GGYRCC	3 cut(s)	46, 173, 605
AccB7I	CCANNNNNTGG	1 cut(s)	313
AciI	CCGC	3 cut(s)	51, 243, 1343
AcoI	YGGCCR	5 cut(s)	97, 304, 793, 1189, 1380
AcsI	RAATTY	4 cut(s)	226, 452, 1163, 1207
AcuI	CTGAAG	1 cut(s)	504
AfiI	CCNNNNNNNGG	4 cut(s)	313, 338, 396, 1035
AhlI	ACTAGT	1 cut(s)	34
Alw21I	GWGCWC	1 cut(s)	1328
Alw26I	GTCTC	1 cut(s)	391
AlwNI	CAGNNNCTG	1 cut(s)	370
Ama87I	CYCGRG	1 cut(s)	1415
AoxI	GGCC	8 cut(s)	97, 304, 315, 340, 793, 1189, 1349, 1380
ApeKI	GCWGC	1 cut(s)	515
ApoI	RAATTY	4 cut(s)	226, 452, 1163, 1207
Asp718I	GGTACC	1 cut(s)	605
AspLEI	GCGC	1 cut(s)	504
AspS9I	GGNCC	2 cut(s)	858, 992
AsuC2I	CCSGG	2 cut(s)	348, 449
AsuHPI	GGTGA	5 cut(s)	292, 397, 862, 1193, 1397
AvaI	CYCGRG	1 cut(s)	1415
AvaII	GGWCC	2 cut(s)	858, 992
BalI	TGGCCA	1 cut(s)	795
BanI	GGYRCC	3 cut(s)	46, 173, 605
BbsI	GAAGAC	1 cut(s)	1479
Bbv12I	GWGCWC	1 cut(s)	1328
BbvI	GCAGC	1 cut(s)	502
BccI	CCATC	4 cut(s)	80, 284, 530, 596
BceAI	ACGGC	3 cut(s)	84, 142, 187
BcnI	CCSGG	2 cut(s)	348, 449
BcoDI	GTCTC	1 cut(s)	391
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	7 cut(s)	26, 35, 122, 837, 911, 983, 1428
BfuAI	ACCTGC	1 cut(s)	836
BisI	GCNGC	2 cut(s)	516, 1344
BlsI	GCNGC	2 cut(s)	517, 1345
BmcAI	AGTACT	5 cut(s)	30, 39, 295, 545, 1376
Bme1390I	CCNGG	2 cut(s)	348, 449
Bme18I	GGWCC	2 cut(s)	858, 992
BmeT110I	CYCGRG	1 cut(s)	1415
BmgT120I	GGNCC	2 cut(s)	858, 992
BmiI	GGNNCC	5 cut(s)	48, 175, 607, 636, 1338
BmrFI	CCNGG	2 cut(s)	348, 449
BmrI	ACTGGG	1 cut(s)	206
BmuI	ACTGGG	1 cut(s)	206
BpiI	GAAGAC	1 cut(s)	1479
BplI	GAGNNNNNCTC	2 cut(s)	224, 256
BpmI	CTGGAG	1 cut(s)	1086
Bpu10I	CCTNAGC	1 cut(s)	371
BpuEI	CTTGAG	2 cut(s)	786, 1268
BpuMI	CCSGG	2 cut(s)	348, 449
BsaBI	GATNNNNATC	1 cut(s)	488
BsaJI	CCNNGG	3 cut(s)	307, 346, 1287
BsaWI	WCCGGW	1 cut(s)	1203
BsaXI	ACNNNNNCTCC	4 cut(s)	619, 649, 1289, 1319
Bsc4I	CCNNNNNNNGG	4 cut(s)	313, 338, 396, 1035
Bse118I	RCCGGY	3 cut(s)	302, 1191, 1382
Bse1I	ACTGG	4 cut(s)	212, 364, 745, 1069
Bse3DI	GCAATG	1 cut(s)	840
Bse8I	GATNNNNATC	1 cut(s)	488
BseDI	CCNNGG	3 cut(s)	307, 346, 1287
BseGI	GGATG	5 cut(s)	276, 755, 792, 1161, 1242
BseJI	GATNNNNATC	1 cut(s)	488
BseLI	CCNNNNNNNGG	4 cut(s)	313, 338, 396, 1035
BseMI	GCAATG	1 cut(s)	840
BseMII	CTCAG	4 cut(s)	130, 299, 362, 1010
BseNI	ACTGG	4 cut(s)	212, 364, 745, 1069
BseRI	GAGGAG	1 cut(s)	1093
BseXI	GCAGC	1 cut(s)	502
Bsh1285I	CGRYCG	1 cut(s)	441
BshFI	GGCC	8 cut(s)	99, 306, 317, 342, 795, 1191, 1351, 1382
BshNI	GGYRCC	3 cut(s)	46, 173, 605
BsiEI	CGRYCG	1 cut(s)	441
BsiHKAI	GWGCWC	1 cut(s)	1328
BsiHKCI	CYCGRG	1 cut(s)	1415
BsiSI	CCGG	6 cut(s)	303, 348, 449, 1192, 1204, 1383
BslI	CCNNNNNNNGG	4 cut(s)	313, 338, 396, 1035
BsmAI	GTCTC	1 cut(s)	391
BsmBI	CGTCTC	1 cut(s)	391
BsnI	GGCC	8 cut(s)	99, 306, 317, 342, 795, 1191, 1351, 1382
BsoBI	CYCGRG	1 cut(s)	1415
Bsp1286I	GDGCHC	1 cut(s)	1328
Bsp143I	GATC	4 cut(s)	138, 281, 438, 1258
Bsp19I	CCATGG	1 cut(s)	307
BspACI	CCGC	3 cut(s)	51, 243, 1343
BspANI	GGCC	8 cut(s)	99, 306, 317, 342, 795, 1191, 1351, 1382
BspCNI	CTCAG	4 cut(s)	129, 298, 363, 1009
BspLI	GGNNCC	5 cut(s)	48, 175, 607, 636, 1338
BspMI	ACCTGC	1 cut(s)	836
BspT107I	GGYRCC	3 cut(s)	46, 173, 605
BsrDI	GCAATG	1 cut(s)	840
BsrFI	RCCGGY	3 cut(s)	302, 1191, 1382
BsrI	ACTGG	4 cut(s)	212, 364, 745, 1069
BssAI	RCCGGY	3 cut(s)	302, 1191, 1382
BssECI	CCNNGG	3 cut(s)	307, 346, 1287
BssMI	GATC	4 cut(s)	138, 281, 438, 1258
BssT1I	CCWWGG	1 cut(s)	307
Bst4CI	ACNGT	4 cut(s)	293, 569, 1221, 1451
Bst6I	CTCTTC	3 cut(s)	739, 941, 1121
BstC8I	GCNNGC	4 cut(s)	500, 1193, 1341, 1358
BstDEI	CTNAG	4 cut(s)	116, 285, 371, 996
BstDSI	CCRYGG	1 cut(s)	307
BstEII	GGTNACC	1 cut(s)	470
BstF5I	GGATG	5 cut(s)	276, 755, 792, 1161, 1242
BstHHI	GCGC	1 cut(s)	504
BstKTI	GATC	4 cut(s)	141, 284, 441, 1261
BstMAI	GTCTC	1 cut(s)	391
BstMBI	GATC	4 cut(s)	138, 281, 438, 1258
BstMCI	CGRYCG	1 cut(s)	441
BstMWI	GCNNNNNNNGC	3 cut(s)	521, 641, 1357
BstNSI	RCATGY	1 cut(s)	1360
BstPI	GGTNACC	1 cut(s)	470
BstSCI	CCNGG	2 cut(s)	346, 447
BstV1I	GCAGC	1 cut(s)	502
BstV2I	GAAGAC	1 cut(s)	1479
BsuRI	GGCC	8 cut(s)	99, 306, 317, 342, 795, 1191, 1351, 1382
BtgI	CCRYGG	1 cut(s)	307
BtgZI	GCGATG	1 cut(s)	310
BtsCI	GGATG	5 cut(s)	276, 755, 792, 1161, 1242
BtsI	GCAGTG	1 cut(s)	1128
BtsIMutI	CAGTG	4 cut(s)	463, 574, 900, 1128
BveI	ACCTGC	1 cut(s)	836
Cac8I	GCNNGC	4 cut(s)	500, 1193, 1341, 1358
CaiI	CAGNNNCTG	1 cut(s)	370
CfoI	GCGC	1 cut(s)	504
Cfr10I	RCCGGY	3 cut(s)	302, 1191, 1382
Cfr13I	GGNCC	2 cut(s)	858, 992
CspCI	CAANNNNNGTGG	2 cut(s)	247, 282
CviAII	CATG	8 cut(s)	194, 308, 413, 476, 715, 862, 1139, 1357
DdeI	CTNAG	4 cut(s)	116, 285, 371, 996
DpnI	GATC	4 cut(s)	140, 283, 440, 1260
DpnII	GATC	4 cut(s)	138, 281, 438, 1258
EaeI	YGGCCR	5 cut(s)	97, 304, 793, 1189, 1380
Eam1104I	CTCTTC	3 cut(s)	739, 941, 1121
EarI	CTCTTC	3 cut(s)	739, 941, 1121
Eco130I	CCWWGG	1 cut(s)	307
Eco147I	AGGCCT	1 cut(s)	342
Eco47I	GGWCC	2 cut(s)	858, 992
Eco57I	CTGAAG	1 cut(s)	504
Eco88I	CYCGRG	1 cut(s)	1415
Eco91I	GGTNACC	1 cut(s)	470
EcoO65I	GGTNACC	1 cut(s)	470
EcoRI	GAATTC	2 cut(s)	226, 452
EcoT14I	CCWWGG	1 cut(s)	307
ErhI	CCWWGG	1 cut(s)	307
Esp3I	CGTCTC	1 cut(s)	391
FaeI	CATG	8 cut(s)	197, 311, 416, 479, 718, 865, 1142, 1360
FatI	CATG	8 cut(s)	193, 307, 412, 475, 714, 861, 1138, 1356
FauI	CCCGC	1 cut(s)	58
FauNDI	CATATG	1 cut(s)	1519
Fnu4HI	GCNGC	2 cut(s)	516, 1344
FokI	GGATG	5 cut(s)	263, 742, 799, 1168, 1229
Fsp4HI	GCNGC	2 cut(s)	516, 1344
FspBI	CTAG	7 cut(s)	26, 35, 122, 837, 911, 983, 1428
GlaI	GCGC	1 cut(s)	503
GluI	GCNGC	2 cut(s)	516, 1344
GsuI	CTGGAG	1 cut(s)	1086
HaeIII	GGCC	8 cut(s)	99, 306, 317, 342, 795, 1191, 1351, 1382
HapII	CCGG	6 cut(s)	303, 348, 449, 1192, 1204, 1383
HhaI	GCGC	1 cut(s)	504
Hin1II	CATG	8 cut(s)	197, 311, 416, 479, 718, 865, 1142, 1360
Hin6I	GCGC	1 cut(s)	502
HinP1I	GCGC	1 cut(s)	502
HindIII	AAGCTT	3 cut(s)	11, 161, 1310
HinfI	GANTC	5 cut(s)	239, 559, 585, 1142, 1529
HpaII	CCGG	6 cut(s)	303, 348, 449, 1192, 1204, 1383
HphI	GGTGA	5 cut(s)	292, 397, 862, 1193, 1397
Hpy166II	GTNNAC	1 cut(s)	405
Hpy188I	TCNGA	8 cut(s)	232, 281, 333, 888, 999, 1263, 1336, 1402
Hpy188III	TCNNGA	7 cut(s)	122, 223, 442, 550, 803, 1146, 1526
Hpy8I	GTNNAC	1 cut(s)	405
HpyAV	CCTTC	4 cut(s)	229, 262, 936, 1153
HpyCH4III	ACNGT	4 cut(s)	293, 569, 1221, 1451
HpyCH4IV	ACGT	1 cut(s)	384
HpyCH4V	TGCA	5 cut(s)	650, 845, 959, 1121, 1233
HpyF10VI	GCNNNNNNNGC	3 cut(s)	521, 641, 1357
HpyF3I	CTNAG	4 cut(s)	116, 285, 371, 996
HpySE526I	ACGT	1 cut(s)	384
Hsp92II	CATG	8 cut(s)	197, 311, 416, 479, 718, 865, 1142, 1360
HspAI	GCGC	1 cut(s)	502
KpnI	GGTACC	1 cut(s)	609
KroI	GCCGGC	1 cut(s)	1191
KroNI	GCCGGC	1 cut(s)	1193
Kzo9I	GATC	4 cut(s)	138, 281, 438, 1258
LmnI	GCTCC	7 cut(s)	334, 427, 640, 777, 979, 1051, 1336
Lsp1109I	GCAGC	1 cut(s)	502
MaeI	CTAG	7 cut(s)	26, 35, 122, 837, 911, 983, 1428
MaeII	ACGT	1 cut(s)	384
MaeIII	GTNAC	9 cut(s)	152, 214, 458, 470, 625, 1199, 1238, 1407, 1430
MalI	GATC	4 cut(s)	140, 283, 440, 1260
MboI	GATC	4 cut(s)	138, 281, 438, 1258
MboII	GAAGA	6 cut(s)	726, 958, 983, 1138, 1416, 1479
MfeI	CAATTG	1 cut(s)	639
MhlI	GDGCHC	1 cut(s)	1328
MlsI	TGGCCA	1 cut(s)	795
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	4 cut(s)	233, 553, 594, 1538
MmeI	TCCRAC	3 cut(s)	414, 755, 1380
Mox20I	TGGCCA	1 cut(s)	795
MroNI	GCCGGC	1 cut(s)	1191
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	3 cut(s)	111, 564, 1005
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	2 cut(s)	524, 1343
MspI	CCGG	6 cut(s)	303, 348, 449, 1192, 1204, 1383
MspR9I	CCNGG	2 cut(s)	348, 449
MunI	CAATTG	1 cut(s)	639
MwoI	GCNNNNNNNGC	3 cut(s)	521, 641, 1357
NaeI	GCCGGC	1 cut(s)	1193
NciI	CCSGG	2 cut(s)	348, 449
NcoI	CCATGG	1 cut(s)	307
NdeI	CATATG	1 cut(s)	1519
NdeII	GATC	4 cut(s)	138, 281, 438, 1258
NgoMIV	GCCGGC	1 cut(s)	1191
NlaIII	CATG	8 cut(s)	197, 311, 416, 479, 718, 865, 1142, 1360
NlaIV	GGNNCC	5 cut(s)	48, 175, 607, 636, 1338
NmeAIII	GCCGAG	1 cut(s)	1312
NmuCI	GTSAC	6 cut(s)	152, 458, 625, 1199, 1407, 1430
NspI	RCATGY	1 cut(s)	1360
PaeI	GCATGC	1 cut(s)	1360
PceI	AGGCCT	1 cut(s)	342
PdiI	GCCGGC	1 cut(s)	1193
PfeI	GAWTC	1 cut(s)	1142
PflMI	CCANNNNNTGG	1 cut(s)	313
PkrI	GCNGC	2 cut(s)	517, 1345
Ple19I	CGATCG	1 cut(s)	441
PleI	GAGTC	4 cut(s)	233, 553, 593, 1537
PpsI	GAGTC	4 cut(s)	233, 553, 593, 1537
PspEI	GGTNACC	1 cut(s)	470
PspN4I	GGNNCC	5 cut(s)	48, 175, 607, 636, 1338
PspPI	GGNCC	2 cut(s)	858, 992
PstNI	CAGNNNCTG	1 cut(s)	370
PvuI	CGATCG	1 cut(s)	441
PvuII	CAGCTG	1 cut(s)	524
SaqAI	TTAA	3 cut(s)	111, 564, 1005
SatI	GCNGC	2 cut(s)	516, 1344
Sau3AI	GATC	4 cut(s)	138, 281, 438, 1258
Sau96I	GGNCC	2 cut(s)	858, 992
ScaI	AGTACT	5 cut(s)	30, 39, 295, 545, 1376
SchI	GAGTC	4 cut(s)	233, 553, 594, 1538
ScrFI	CCNGG	2 cut(s)	348, 449
SduI	GDGCHC	1 cut(s)	1328
SinI	GGWCC	2 cut(s)	858, 992
SmlI	CTYRAG	2 cut(s)	801, 1247
SmoI	CTYRAG	2 cut(s)	801, 1247
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	1 cut(s)	1360
SseBI	AGGCCT	1 cut(s)	342
SsiI	CCGC	3 cut(s)	51, 243, 1343
SspMI	CTAG	7 cut(s)	26, 35, 122, 837, 911, 983, 1428
StuI	AGGCCT	1 cut(s)	342
StyD4I	CCNGG	2 cut(s)	346, 447
StyI	CCWWGG	1 cut(s)	307
TaaI	ACNGT	4 cut(s)	293, 569, 1221, 1451
TaiI	ACGT	1 cut(s)	387
TaqI	TCGA	1 cut(s)	441
TatI	WGTACW	8 cut(s)	28, 37, 288, 293, 543, 1008, 1213, 1374
TauI	GCSGC	1 cut(s)	1346
TfiI	GAWTC	1 cut(s)	1142
Tru1I	TTAA	3 cut(s)	111, 564, 1005
Tru9I	TTAA	3 cut(s)	111, 564, 1005
TscAI	CASTG	4 cut(s)	463, 574, 900, 1128
TseFI	GTSAC	6 cut(s)	152, 458, 625, 1199, 1407, 1430
TseI	GCWGC	1 cut(s)	515
Tsp45I	GTSAC	6 cut(s)	152, 458, 625, 1199, 1407, 1430
TspDTI	ATGAA	5 cut(s)	64, 803, 1155, 1172, 1503
TspGWI	ACGGA	1 cut(s)	1289
TspRI	CASTG	4 cut(s)	463, 574, 900, 1128
Van91I	CCANNNNNTGG	1 cut(s)	313
VpaK11BI	GGWCC	2 cut(s)	858, 992
XapI	RAATTY	4 cut(s)	226, 452, 1163, 1207
XbaI	TCTAGA	1 cut(s)	121
XceI	RCATGY	1 cut(s)	1360
XspI	CTAG	7 cut(s)	26, 35, 122, 837, 911, 983, 1428
ZrmI	AGTACT	5 cut(s)	30, 39, 295, 545, 1376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.